Metagenome Family F029148

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F029148
Family Type	Metagenome
Number of Sequences	189
Average Sequence Length	65 residues
Representative Sequence	MSSLDWKEIEIRSRGKRVKGRYSVSDDLVTVAAWNGTKSARLGILPAERLAQMLLRELAAEGETK
Number of Associated Samples	145
Number of Associated Scaffolds	189

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	63.30 %
% of genes near scaffold ends (potentially truncated)	34.39 %
% of genes from short scaffolds (< 2000 bps)	76.19 %
Associated GOLD sequencing projects	135
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.852 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil (12.698 % of family members)
Environment Ontology (ENVO)	Unclassified (34.392 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.497 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.35% β-sheet: 31.18% Coil/Unstructured: 49.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 189 Family Scaffolds
PF13467	RHH_4	11.64
PF00216	Bac_DNA_binding	7.41
PF10011	DUF2254	3.70
PF00589	Phage_integrase	2.65
PF04392	ABC_sub_bind	2.12
PF01068	DNA_ligase_A_M	2.12
PF06906	DUF1272	1.06
PF06823	DUF1236	1.06
PF14317	YcxB	1.06
PF05118	Asp_Arg_Hydrox	0.53
PF01464	SLT	0.53
PF03330	DPBB_1	0.53
PF13505	OMP_b-brl	0.53
PF00768	Peptidase_S11	0.53
PF07943	PBP5_C	0.53
PF02452	PemK_toxin	0.53
PF07536	HWE_HK	0.53
PF00211	Guanylate_cyc	0.53
PF12728	HTH_17	0.53
PF00230	MIP	0.53
PF05199	GMC_oxred_C	0.53
PF11149	DUF2924	0.53
PF07992	Pyr_redox_2	0.53
PF00535	Glycos_transf_2	0.53
PF06147	DUF968	0.53
PF00583	Acetyltransf_1	0.53
PF08032	SpoU_sub_bind	0.53
PF13356	Arm-DNA-bind_3	0.53

COG ID	Name	Functional Category	% Frequency in 189 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	7.41
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.12
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.12
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.12
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.06
COG3813	Uncharacterized conserved protein, DUF1272 domain	Function unknown [S]	1.06
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.53
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.53
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.53
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.53
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.53
COG3555	Aspartyl/asparaginyl beta-hydroxylase, cupin superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.53
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.53
COG4251	Bacteriophytochrome (light-regulated signal transduction histidine kinase)	Signal transduction mechanisms [T]	0.53

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.85 %
Unclassified	root	N/A	48.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.85 %
Unclassified	root	N/A	48.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.85 %
Unclassified	root	N/A	48.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	39.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.10 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.59 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.53 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11.64 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	4.76 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.59 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.53 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.53 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.41 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	4.23 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	2.12 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.59 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.53 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	0.53 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.53 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	4.23 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.12 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.59 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.06 %
Desertimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas	0.53 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.53 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.53 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.53 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.15 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	4.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.12 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.59 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.06 %
Desertimonas flava	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	0.53 %
Microvirga tunisiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	0.53 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.53 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.53 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886007\|SwRhRL2b_contig_3543884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1281	Open in IMG/M
2162886012\|MBSR1b_contig_9830969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1659	Open in IMG/M
3300000043\|ARcpr5yngRDRAFT_c007984	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300001433\|JGI24036J14985_100079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3686	Open in IMG/M
3300001976\|JGI24752J21851_1002367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2507	Open in IMG/M
3300001990\|JGI24737J22298_10001443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8479	Open in IMG/M
3300001991\|JGI24743J22301_10133216	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300002070\|JGI24750J21931_1000347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7857	Open in IMG/M
3300002155\|JGI24033J26618_1047111	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300002244\|JGI24742J22300_10000457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6039	Open in IMG/M
3300003371\|JGI26145J50221_1017704	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300003995\|Ga0055438_10001530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3837	Open in IMG/M
3300004114\|Ga0062593_100355141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1284	Open in IMG/M
3300004114\|Ga0062593_101189523	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300004114\|Ga0062593_102675460	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300004156\|Ga0062589_100062377	Not Available	2163	Open in IMG/M
3300004156\|Ga0062589_100129784	Not Available	1682	Open in IMG/M
3300004156\|Ga0062589_100173283	Not Available	1517	Open in IMG/M
3300004156\|Ga0062589_101046623	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300004156\|Ga0062589_102167741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300004157\|Ga0062590_100019703	All Organisms → cellular organisms → Bacteria	3135	Open in IMG/M
3300004157\|Ga0062590_100831688	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300004157\|Ga0062590_102032845	Not Available	597	Open in IMG/M
3300004463\|Ga0063356_100028283	All Organisms → cellular organisms → Bacteria	5367	Open in IMG/M
3300004463\|Ga0063356_100063565	All Organisms → cellular organisms → Bacteria → Proteobacteria	3797	Open in IMG/M
3300004463\|Ga0063356_100324756	Not Available	1926	Open in IMG/M
3300004463\|Ga0063356_102761110	Not Available	756	Open in IMG/M
3300004463\|Ga0063356_103364773	Not Available	689	Open in IMG/M
3300004463\|Ga0063356_103971011	Not Available	637	Open in IMG/M
3300004463\|Ga0063356_104472987	Not Available	601	Open in IMG/M
3300004463\|Ga0063356_105596545	Not Available	539	Open in IMG/M
3300004479\|Ga0062595_101633887	Not Available	603	Open in IMG/M
3300004480\|Ga0062592_100183966	Not Available	1450	Open in IMG/M
3300004643\|Ga0062591_100004366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5173	Open in IMG/M
3300004643\|Ga0062591_100018592	Not Available	3299	Open in IMG/M
3300004643\|Ga0062591_100423295	Not Available	1111	Open in IMG/M
3300005093\|Ga0062594_100393540	Not Available	1115	Open in IMG/M
3300005093\|Ga0062594_100459529	Not Available	1058	Open in IMG/M
3300005165\|Ga0066869_10016381	Not Available	1074	Open in IMG/M
3300005168\|Ga0066809_10035682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1069	Open in IMG/M
3300005169\|Ga0066810_10047241	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300005290\|Ga0065712_10083212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2855	Open in IMG/M
3300005290\|Ga0065712_10422081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	709	Open in IMG/M
3300005294\|Ga0065705_11038737	Not Available	537	Open in IMG/M
3300005328\|Ga0070676_10179034	Not Available	1377	Open in IMG/M
3300005329\|Ga0070683_100112574	All Organisms → cellular organisms → Bacteria → Proteobacteria	2568	Open in IMG/M
3300005330\|Ga0070690_101058103	Not Available	642	Open in IMG/M
3300005332\|Ga0066388_100828670	Not Available	1514	Open in IMG/M
3300005332\|Ga0066388_105178874	Not Available	662	Open in IMG/M
3300005335\|Ga0070666_10094611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2056	Open in IMG/M
3300005339\|Ga0070660_100029503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4111	Open in IMG/M
3300005341\|Ga0070691_10906996	Not Available	544	Open in IMG/M
3300005356\|Ga0070674_100920215	Not Available	763	Open in IMG/M
3300005356\|Ga0070674_102188392	Not Available	505	Open in IMG/M
3300005365\|Ga0070688_100481388	Not Available	933	Open in IMG/M
3300005365\|Ga0070688_100509647	Not Available	909	Open in IMG/M
3300005440\|Ga0070705_101738950	Not Available	528	Open in IMG/M
3300005456\|Ga0070678_101309337	Not Available	674	Open in IMG/M
3300005456\|Ga0070678_101376884	Not Available	658	Open in IMG/M
3300005518\|Ga0070699_100344959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1341	Open in IMG/M
3300005518\|Ga0070699_100857314	Not Available	832	Open in IMG/M
3300005526\|Ga0073909_10260146	Not Available	775	Open in IMG/M
3300005530\|Ga0070679_101659777	Not Available	587	Open in IMG/M
3300005535\|Ga0070684_100154127	Not Available	2083	Open in IMG/M
3300005544\|Ga0070686_100399404	Not Available	1045	Open in IMG/M
3300005546\|Ga0070696_100464395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1001	Open in IMG/M
3300005546\|Ga0070696_100775677	Not Available	787	Open in IMG/M
3300005549\|Ga0070704_100822053	Not Available	831	Open in IMG/M
3300005617\|Ga0068859_101396538	All Organisms → cellular organisms → Bacteria → Proteobacteria	772	Open in IMG/M
3300005718\|Ga0068866_10000865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13392	Open in IMG/M
3300005764\|Ga0066903_104912182	Not Available	710	Open in IMG/M
3300005834\|Ga0068851_10149328	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300005844\|Ga0068862_101124807	Not Available	781	Open in IMG/M
3300005937\|Ga0081455_10026705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava	5302	Open in IMG/M
3300005937\|Ga0081455_10188107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga tunisiensis	1558	Open in IMG/M
3300006058\|Ga0075432_10025467	All Organisms → cellular organisms → Bacteria → Proteobacteria	2030	Open in IMG/M
3300006195\|Ga0075366_10653981	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300006196\|Ga0075422_10014996	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300006353\|Ga0075370_10682749	Not Available	624	Open in IMG/M
3300006806\|Ga0079220_10021114	All Organisms → cellular organisms → Bacteria → Proteobacteria	2749	Open in IMG/M
3300006903\|Ga0075426_10285335	All Organisms → cellular organisms → Bacteria → Proteobacteria	1206	Open in IMG/M
3300006904\|Ga0075424_102558714	Not Available	534	Open in IMG/M
3300006914\|Ga0075436_100941735	Not Available	647	Open in IMG/M
3300009011\|Ga0105251_10631407	Not Available	511	Open in IMG/M
3300009036\|Ga0105244_10496973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	561	Open in IMG/M
3300009092\|Ga0105250_10599442	Not Available	510	Open in IMG/M
3300009094\|Ga0111539_10104995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3315	Open in IMG/M
3300009101\|Ga0105247_10055076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2455	Open in IMG/M
3300009101\|Ga0105247_10926369	Not Available	675	Open in IMG/M
3300009148\|Ga0105243_12205290	Not Available	587	Open in IMG/M
3300009177\|Ga0105248_11325580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	814	Open in IMG/M
3300009551\|Ga0105238_10717198	Not Available	1013	Open in IMG/M
3300009553\|Ga0105249_11735461	Not Available	697	Open in IMG/M
3300010371\|Ga0134125_12870785	Not Available	523	Open in IMG/M
3300010373\|Ga0134128_12613236	Not Available	556	Open in IMG/M
3300010396\|Ga0134126_10156231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2760	Open in IMG/M
3300010399\|Ga0134127_10249996	Not Available	1679	Open in IMG/M
3300010400\|Ga0134122_11901638	Not Available	630	Open in IMG/M
3300010401\|Ga0134121_12636217	Not Available	547	Open in IMG/M
3300011119\|Ga0105246_10005492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7727	Open in IMG/M
3300012503\|Ga0157313_1025265	Not Available	637	Open in IMG/M
3300012505\|Ga0157339_1057776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	530	Open in IMG/M
3300012507\|Ga0157342_1004596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1232	Open in IMG/M
3300012515\|Ga0157338_1032394	Not Available	673	Open in IMG/M
3300012895\|Ga0157309_10015787	Not Available	1589	Open in IMG/M
3300012899\|Ga0157299_10143713	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300012900\|Ga0157292_10016374	All Organisms → cellular organisms → Bacteria → Proteobacteria	1723	Open in IMG/M
3300012906\|Ga0157295_10048853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	999	Open in IMG/M
3300012906\|Ga0157295_10356920	Not Available	531	Open in IMG/M
3300012955\|Ga0164298_10072373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1738	Open in IMG/M
3300012988\|Ga0164306_10710990	Not Available	799	Open in IMG/M
3300012989\|Ga0164305_10030907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2935	Open in IMG/M
3300013297\|Ga0157378_11431164	Not Available	735	Open in IMG/M
3300014325\|Ga0163163_10063700	All Organisms → cellular organisms → Bacteria	3657	Open in IMG/M
3300014969\|Ga0157376_10121163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2318	Open in IMG/M
3300014969\|Ga0157376_11243754	Not Available	773	Open in IMG/M
3300015200\|Ga0173480_10829789	Not Available	593	Open in IMG/M
3300015371\|Ga0132258_10101557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6777	Open in IMG/M
3300015371\|Ga0132258_10383144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3488	Open in IMG/M
3300015371\|Ga0132258_11428260	Not Available	1748	Open in IMG/M
3300015371\|Ga0132258_12304265	All Organisms → cellular organisms → Bacteria → Proteobacteria	1350	Open in IMG/M
3300015371\|Ga0132258_12485088	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300015371\|Ga0132258_13944695	Not Available	1008	Open in IMG/M
3300015372\|Ga0132256_100087623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2997	Open in IMG/M
3300015373\|Ga0132257_101590483	Not Available	836	Open in IMG/M
3300015373\|Ga0132257_101975508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	752	Open in IMG/M
3300015374\|Ga0132255_101190459	Not Available	1147	Open in IMG/M
3300018032\|Ga0187788_10091369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1090	Open in IMG/M
3300018067\|Ga0184611_1045092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1457	Open in IMG/M
3300019356\|Ga0173481_10025545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1843	Open in IMG/M
3300019361\|Ga0173482_10000956	All Organisms → cellular organisms → Bacteria → Proteobacteria	5522	Open in IMG/M
3300019361\|Ga0173482_10011314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2309	Open in IMG/M
3300023067\|Ga0247743_1039431	Not Available	661	Open in IMG/M
3300023072\|Ga0247799_1107675	Not Available	506	Open in IMG/M
3300023102\|Ga0247754_1007971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2147	Open in IMG/M
3300023168\|Ga0247748_1004138	All Organisms → cellular organisms → Bacteria → Proteobacteria	1779	Open in IMG/M
3300023261\|Ga0247796_1009651	Not Available	1368	Open in IMG/M
3300023266\|Ga0247789_1001465	All Organisms → cellular organisms → Bacteria → Proteobacteria	3653	Open in IMG/M
3300023266\|Ga0247789_1007004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1722	Open in IMG/M
3300025538\|Ga0210132_1046633	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300025558\|Ga0210139_1039793	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300025711\|Ga0207696_1028792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	1701	Open in IMG/M
3300025885\|Ga0207653_10010906	All Organisms → cellular organisms → Bacteria	2836	Open in IMG/M
3300025900\|Ga0207710_10397077	Not Available	707	Open in IMG/M
3300025907\|Ga0207645_10004723	All Organisms → cellular organisms → Bacteria → Proteobacteria	10024	Open in IMG/M
3300025917\|Ga0207660_10797794	Not Available	771	Open in IMG/M
3300025918\|Ga0207662_10792896	Not Available	667	Open in IMG/M
3300025921\|Ga0207652_11571441	Not Available	562	Open in IMG/M
3300025921\|Ga0207652_11629760	Not Available	550	Open in IMG/M
3300025925\|Ga0207650_10002789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12070	Open in IMG/M
3300025925\|Ga0207650_10275458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1369	Open in IMG/M
3300025930\|Ga0207701_10196755	All Organisms → cellular organisms → Bacteria	1773	Open in IMG/M
3300025940\|Ga0207691_10471563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1067	Open in IMG/M
3300025979\|Ga0210078_1016120	Not Available	948	Open in IMG/M
3300026075\|Ga0207708_10614605	Not Available	922	Open in IMG/M
3300026075\|Ga0207708_11685478	Not Available	557	Open in IMG/M
3300026121\|Ga0207683_11421414	Not Available	641	Open in IMG/M
3300026709\|Ga0207512_102166	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300026891\|Ga0208889_1008747	Not Available	619	Open in IMG/M
3300026952\|Ga0207434_1011625	Not Available	696	Open in IMG/M
3300027036\|Ga0207467_1002811	All Organisms → cellular organisms → Bacteria → Proteobacteria	1185	Open in IMG/M
3300027390\|Ga0207435_101446	Not Available	1165	Open in IMG/M
3300027455\|Ga0207504_100864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	923	Open in IMG/M
3300027682\|Ga0209971_1007707	All Organisms → cellular organisms → Bacteria → Proteobacteria	2556	Open in IMG/M
3300027765\|Ga0209073_10506633	Not Available	509	Open in IMG/M
3300027907\|Ga0207428_10374463	Not Available	1045	Open in IMG/M
3300028381\|Ga0268264_12290793	Not Available	547	Open in IMG/M
3300028587\|Ga0247828_11138566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	519	Open in IMG/M
(restricted) 3300031150\|Ga0255311_1025352	Not Available	1229	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10078336	Not Available	876	Open in IMG/M
(restricted) 3300031248\|Ga0255312_1017110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1731	Open in IMG/M
3300031538\|Ga0310888_10841897	Not Available	570	Open in IMG/M
3300031716\|Ga0310813_10002041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12297	Open in IMG/M
3300031716\|Ga0310813_10110083	Not Available	2157	Open in IMG/M
3300031716\|Ga0310813_10742679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	879	Open in IMG/M
3300031716\|Ga0310813_11920064	Not Available	557	Open in IMG/M
3300031908\|Ga0310900_10042337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2614	Open in IMG/M
3300031913\|Ga0310891_10135262	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300031940\|Ga0310901_10409655	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300032000\|Ga0310903_10505713	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300032179\|Ga0310889_10253690	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
3300032180\|Ga0307471_101177238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	931	Open in IMG/M
3300032421\|Ga0310812_10103118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1174	Open in IMG/M
3300032421\|Ga0310812_10164151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	950	Open in IMG/M
3300033004\|Ga0335084_12448068	Not Available	502	Open in IMG/M
3300033412\|Ga0310810_10510124	Not Available	1192	Open in IMG/M
3300034817\|Ga0373948_0002471	All Organisms → cellular organisms → Bacteria → Proteobacteria	2736	Open in IMG/M
3300034818\|Ga0373950_0041616	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.14%
Host-Associated	Host-Associated	42.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.50%
Plants	Host-Associated → Plants	42.86%
Aquatic	Environmental → Aquatic	2.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.99%
Marine	Environmental → Aquatic → Marine	2.12%
Roots	Host-Associated → Plants → Roots	1.59%
Sediment	Environmental → Aquatic → Sediment	0.53%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	12.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.41%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.35%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.12%
Sand	Environmental → Terrestrial → Soil → Sand	1.59%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.59%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.06%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.53%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.53%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	17.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.64%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.35%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.70%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.59%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.06%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.06%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.53%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.53%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	12.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.05%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.29%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.17%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.65%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.12%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.59%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.06%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.06%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.06%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.06%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.06%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.06%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.53%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.53%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.53%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.53%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.53%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.53%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.53%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.53%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.53%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.53%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2162886012	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300000043	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere	Host-Associated	Open in IMG/M
3300001433	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300002070	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4	Host-Associated	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300003995	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006195	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006353	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300023067	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025538	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025979	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026709	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-E (SPAdes)	Environmental	Open in IMG/M
3300026891	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB (SPAdes)	Environmental	Open in IMG/M
3300026952	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-10 (SPAdes)	Environmental	Open in IMG/M
3300027036	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027390	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1-11 (SPAdes)	Environmental	Open in IMG/M
3300027427	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027455	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G06K3-12 (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300031150 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031248 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0693.00001110	2162886007	Switchgrass Rhizosphere	MSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTK
MBSR1b_0837.00001470	2162886012	Miscanthus Rhizosphere	MTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
ARcpr5yngRDRAFT_0079842	3300000043	Arabidopsis Rhizosphere	MSSLDWIDIEIVLRGKRVKGRYNVSEGLVTVAAWSRTNTAPLGILPAERLAKMLLRELASREQEK*
JGI24036J14985_1000791	3300001433	Corn, Switchgrass And Miscanthus Rhizosphere	GWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
JGI24752J21851_10023671	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	ADVAMTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
JGI24737J22298_100014431	3300001990	Corn Rhizosphere	WKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
JGI24743J22301_101332161	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	PLGWKDIEIKYRGKPVKGRYNXSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
JGI24750J21931_10003471	3300002070	Corn, Switchgrass And Miscanthus Rhizosphere	DPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
JGI24033J26618_10471111	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	IEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
JGI24742J22300_100004571	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	IKYRGKPVKGRYNASDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
JGI26145J50221_10177041	3300003371	Arabidopsis Thaliana Rhizosphere	IKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0055438_100015307	3300003995	Natural And Restored Wetlands	MNSLDWKEIEITSRGKRVKGRYIVTDDNFVTVVAWNGTKTAQLGILPAERLVQMLLRELAAEGTN*
Ga0062593_1003551411	3300004114	Soil	MSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTK*
Ga0062593_1011895233	3300004114	Soil	ESADVAMTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0062593_1026754602	3300004114	Soil	MSSLDWKEIEITSRGKRVKGRYSVADDLVTVAAWNGTKTARLGVLPAERLAQMLLRELAAEGETK*
Ga0062589_1000623771	3300004156	Soil	MTSLDWKEVEIKYRGKPVKGRYNVSDDLVTVAAWNGTKTAQLGILPAERLAQMLLRELAAEGTG*
Ga0062589_1001297843	3300004156	Soil	MSSMDWMELEIMWRGKLVKGRYNVSDDLVTVAAWNGTEAARLGVLPAQRLAQMLLRELAAKGETK*
Ga0062589_1001732832	3300004156	Soil	MSSLDWKEIEINWRGKRAKGRYIVSDDLVTVAAWSGTKRARLGILPAERLAQMLLRELADDTEKL*
Ga0062589_1010466231	3300004156	Soil	PLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0062589_1021677411	3300004156	Soil	MADAAWKQIEIKSRGKVVKGRYNVSDNVVTVAAWNGTRTAPLGILPAERLAKMLLRELVSQTKEK*
Ga0062590_1000197033	3300004157	Soil	MDWMELEIMWRGKLVKGRYNVSDDLVTVAAWNGTEAARLGVLPAQRLAQMLLRELAAKGETK*
Ga0062590_1008316881	3300004157	Soil	MSSLDWIDIEIVLRGKRVKGRYNVSEGLVTVAAWNGTHTAPLGILYEAKVLLRELASREQEK*
Ga0062590_1020328452	3300004157	Soil	MTSLDWKEVEIKYRGKPVKGRYNVSDDVVTVAAWNGTKTAQLGILPAERLAQMLLRELAAEGTG*
Ga0063356_1000282835	3300004463	Arabidopsis Thaliana Rhizosphere	MSSPGWKEIEIRSRGKRVKGRYSVSDDVVTVAAWNGTKTARLGILPAERLAQLLLRELADEAKPN*
Ga0063356_1000635654	3300004463	Arabidopsis Thaliana Rhizosphere	MSSLDWKEIEIRYRGKPVKGRYNVSDNLVTVAAWNGTKTAQLVAQMLLRELAA*
Ga0063356_1003247562	3300004463	Arabidopsis Thaliana Rhizosphere	MNSMDSMELEIMWRGKLVKGRYNVSDDLVTVAAWNGTEARLGVLPAQRLAQMLLRELAAKGETK*
Ga0063356_1027611102	3300004463	Arabidopsis Thaliana Rhizosphere	MSSLGWKEIEIRSRGKGVKGRYSVADDLVTVAAWNGTKTARLGVLPAERLAQMLLRELVAEGEKE*
Ga0063356_1033647731	3300004463	Arabidopsis Thaliana Rhizosphere	MTSLEWMEVEIRWRGKLVKGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELASREQEK*
Ga0063356_1039710111	3300004463	Arabidopsis Thaliana Rhizosphere	MSSLDWKEIEINWRGKRTKGRYIVSDDLVTVAAWSGTKRARLGILPAERLAQMLLRE
Ga0063356_1044729872	3300004463	Arabidopsis Thaliana Rhizosphere	MSSLDWKEIEIRSRGKRVKGRYSVADDLVTVAAWNGTKTARLGVLPAERLAQMLLRELAAEGEKK*
Ga0063356_1055965451	3300004463	Arabidopsis Thaliana Rhizosphere	MNSLDWKELEITSRGKRVKGRYIVTDDNLVTVAAWSGTKTARLGILPAERLAQMLLRELAAETEAK*
Ga0062595_1016338871	3300004479	Soil	MADAAWKQIEIKSRGKVVKGRYNVSDNVVTVAAWNGTRTAPLGILPAERLAKMLLRELGSQTKEK*
Ga0062592_1001839661	3300004480	Soil	MELEIMWRGKLVKGRYNVSDDLVTVAAWNGTEAARLGVLPAQRLAQMLLRELAAKGETK*
Ga0062591_1000043662	3300004643	Soil	MSSMDWMELEIMWRGKLVKGRYNVSDDLVTVAAWNGTEARLGVLPAQRLAQMLWRELAAKGETK*
Ga0062591_1000185925	3300004643	Soil	LEGSAKWVLFTGRRYRGKLVKGRYNVSANLVTVAAWNGTKTAQLGILPAERLAQMLLRELAAQGEIK*
Ga0062591_1004232952	3300004643	Soil	MNSLDWKEIEIKYRGKPVKGRYNVSDNFVTVAAWNGTKRAQLGILPAERLAQMLLRELVAEGTK*
Ga0062594_1003935401	3300005093	Soil	MSSLDWKDIEIVSRGKRIKGRYNVSEGLVTVAAWRGTNTAPLGILPAERLAKMLLRELASREQGK*
Ga0062594_1004595292	3300005093	Soil	MDSLDWKDIEINLGGKLIKGRYNVSDNLVTVAAWNGTKTAGLGVLPAVRLAQMLLRELVTEGETK*
Ga0066869_100163812	3300005165	Soil	MSSLDWKDIEIKYRGTRVKGRYSVSDNLVTVAAWSGTKTAQLGILPAERLAQMLLRELAAQGEIK*
Ga0066809_100356822	3300005168	Soil	MGRYRQMSLENWKEIEINYCGKRFKGTYYVDDQRLVTVAAWNGTKTAKLGILPAERLAHILLRDLASEQETK*
Ga0066810_100472411	3300005169	Soil	MGRYRQMSLENWKEIEINYCGKRFKGSYYVDDQRLVTVAAWNGTKTAKLGILPAERLAHMLLRDLASEQETK*
Ga0065712_100832122	3300005290	Miscanthus Rhizosphere	MSSLDWKGIEINWRGKCVKGRYIVSDDLVTVAAWNGTRTARLGILPAERLAAMLLRELASETETK*
Ga0065712_104220812	3300005290	Miscanthus Rhizosphere	MSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQML
Ga0065705_110387372	3300005294	Switchgrass Rhizosphere	MTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0070676_101790343	3300005328	Miscanthus Rhizosphere	VTIGVLTEMSSLHWKEIEIRYRGKPVKGRFNVSDKLVTVAAWNGTKTGQLGILPAERLAQMLLRELAAQGEIK*
Ga0070683_1001125743	3300005329	Corn Rhizosphere	MEVEIRWRGKLVKGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELASREQEK*
Ga0070690_1010581032	3300005330	Switchgrass Rhizosphere	SEMSSLDWKETEINWRGKRVKGRYNVSDGLVTVAAWNGTKTARVGILPAERLAQMLLRELAVETETK*
Ga0066388_1008286703	3300005332	Tropical Forest Soil	MDWTDIEIKYGGKSVKGRYSVTGDLVTVAAWNGTKTAKLGILPAERLAQMLLRQLVDEGETR*
Ga0066388_1051788741	3300005332	Tropical Forest Soil	PVMDWTDIEIRYRGKPVKGRYSVTDNLVTVAAWNGTKTARLGVLPAERLAQMLLRQLADQEETN*
Ga0070666_100946113	3300005335	Switchgrass Rhizosphere	DDPLGWKDIEIKYRGKPVKGRYNVSDNFVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0070660_1000295031	3300005339	Corn Rhizosphere	MSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQILLRELAAEGTK*
Ga0070691_109069961	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	AFNKMSSLDWKEIEITSRGKRVKGRYSVADDLVTVAAWNGTKTARLGVLPAERLAQMLLRELAAEGETK*
Ga0070674_1009202152	3300005356	Miscanthus Rhizosphere	MSSLDWKDIEIVSRGKRIKGRYNVSEGLVTVAAWRGTNTAPLGILPAERLAKMLLRELASQEQGK*
Ga0070674_1021883922	3300005356	Miscanthus Rhizosphere	MSSLDWKEIEINWRGKRAKGRYIVSDDLVTVAAWSGTKRARLGILPAERLAQMLLRELAD
Ga0070688_1004813883	3300005365	Switchgrass Rhizosphere	ADAAWKQIEIKSRGKVVKGRYNVSDNVVTVAAWNGTRTAPLGILPAERLAKMLLRELGSQTKEK*
Ga0070688_1005096472	3300005365	Switchgrass Rhizosphere	MPRGVNAGAFWSISEMSSLDWKETEINWRGKRVKGRYNVSDGLVTVAAWNGTKTARVGILPAERLAQMLLRELAVETETK*
Ga0070705_1017389501	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MGSLHWKEIEVRYRGKLVKGRYNVSANLVTAAAWNGTKTAQLGILPAERLAQMLLRELAAQGEIK*
Ga0070678_1013093371	3300005456	Miscanthus Rhizosphere	MSSLDWREIEIKYRGKPVKGRYNLSDNVVTVAAWNGTKAAQLGILPAERLAQM
Ga0070678_1013768842	3300005456	Miscanthus Rhizosphere	SGMDSLDWKDIKINLGGKLIKGRYNVSDNLVTVAAWNGTKTAGLGVLPAVRLAQMLLRELVTEGETK*
Ga0070699_1003449591	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTDDPLGWKDIEIKYRGKPVKGRYNASDNLVTVVAWSGTKTARLGVLPAERLAKMLLRDLAHQGETK*
Ga0070699_1008573143	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLEWMEVEIRWRGKLVNGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELASREQEK*
Ga0073909_102601462	3300005526	Surface Soil	MSLGNWKEIEINYRGKRVKGTHYVDDQRLVTVAAWNGTKTAKLGILPAERLAHMLLRDLASEQETK*
Ga0070679_1016597772	3300005530	Corn Rhizosphere	MWRGKLVKGRYNVSDDLVTVAAWNGTEAARLGVLPAQRLAQMLLRELAAKGETK*
Ga0070684_1001541272	3300005535	Corn Rhizosphere	MGSLHWKEIEVRYRGKLVKGRYNVSANLVTVAAWNGTKTAQLGILPAERLAQMLLRELAAQGEIK*
Ga0070686_1003994042	3300005544	Switchgrass Rhizosphere	MMPRGVNARAFWSISEMSSLDWKETEINWRGKRVKGRYNVSDGLVTVAAWNGTKTARVGILPAERLAQMLLRELAVETETK*
Ga0070696_1004643951	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDSLDWKDIKINLGGKLIKGRYNVSDNLVTVAACNGTKTAGLGVLPAVRLAQMLLRELVTEGETK*
Ga0070696_1007756771	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MMPRGVNARAFWSISEMSSLDWKEIEINWRGKRAKGRYIVSDDLVTVAAWSGTKRARLGILPAERLAQMLLRELADDTEKL*
Ga0070704_1008220533	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	EIEINWRGKRAKGRYIVSDDLVTVAAWSGTKRARLGILPAERLAQMLLRELADDTEKL*
Ga0068859_1013965381	3300005617	Switchgrass Rhizosphere	MSSLDWKEIEITSRGKRVKGRYSVADDLVTVAAWNGTKTARLGILPAERLAQMLLHELAAEGEKK*
Ga0068866_1000086522	3300005718	Miscanthus Rhizosphere	MTDDPLGWKDIEIKYRGKPVKGRYNASDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0066903_1049121822	3300005764	Tropical Forest Soil	MDSPDWIEIEIMVRGKRTKGRYYVSDKIVTVAAWSGTKSARLGVLPAQRLAQMLLRQLADEGQSAADR*
Ga0068851_101493282	3300005834	Corn Rhizosphere	MTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVAVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0068862_1011248073	3300005844	Switchgrass Rhizosphere	SEMSSLDWKEIEINWRGKRAKGRYIVSDDLVTVAAWSGTKRARLGILPAERLAQMLLRELADDTEKL*
Ga0081455_100267056	3300005937	Tabebuia Heterophylla Rhizosphere	MNLLEWKEIECNSRGKRVKGRYSVSDDLVTVAAWNDTKTARLGVLPAERLAQMLLLVAEREAK*
Ga0081455_101881072	3300005937	Tabebuia Heterophylla Rhizosphere	IKYRGKPLKGRYYVSDNVVTVAAWNGTKTAQLGILPPERLAQMLLRQLADEGGAI*
Ga0075432_100254674	3300006058	Populus Rhizosphere	SLEWMEVEIRWRGKLVKGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELASREQEK*
Ga0075366_106539812	3300006195	Populus Endosphere	DIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0075422_100149964	3300006196	Populus Rhizosphere	MTDDPLGWKDIEIKYRGKPVKGRYNASDNLVTVLAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0075370_106827491	3300006353	Populus Endosphere	MTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVTVAAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0079220_100211144	3300006806	Agricultural Soil	MSSLDWNEIEIRSRGRRVRGRYNVSDNLVTVAAWSGTKAAPLGILPAERLAKMLLRELAAQGQEE*
Ga0075426_102853351	3300006903	Populus Rhizosphere	IEIKYRGKPVKGRYNASDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0075424_1025587141	3300006904	Populus Rhizosphere	MADAAWKQIEIKSRGKVVKGRYNVSDNVVTVAAWNGTRTAPLGILPAERLAKMLLRELADEAK*
Ga0075436_1009417352	3300006914	Populus Rhizosphere	MTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRDLAHQGETK*
Ga0105251_106314071	3300009011	Switchgrass Rhizosphere	RAVEVLWRRKLVKGRVSDRVVTVAAWNGTRTAPLGILPAERLAKMLLRELADEAK*
Ga0105244_104969732	3300009036	Miscanthus Rhizosphere	MSSLDWREIEIKYRGKPVKGRYNASDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGE
Ga0105250_105994421	3300009092	Switchgrass Rhizosphere	IEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTK*
Ga0111539_101049953	3300009094	Populus Rhizosphere	MSSLDWKEIEINWRGRRAKGRYIVSDDLVTVASASGTKRARLGILPAERLAQMLLRELADDTEKL*
Ga0105247_100550764	3300009101	Switchgrass Rhizosphere	MMPRGVNAGAFWSISEMSSLDWKETEINWRGKRVKGRYNVSDGLVTVAAWNGTKTARVGILPAERLAQMLLRELAVETETK*
Ga0105247_109263691	3300009101	Switchgrass Rhizosphere	VYALPGFRPPSFWKEIEITSRGKRVKGRYSFADDLVTVAAWNGTKTARLGILPAERLAQMLLHELAAEGEKK*
Ga0105243_122052902	3300009148	Miscanthus Rhizosphere	MSSLDWKDIEIVSQGKRVRGRYSVSDNLVTVAAWSGTKTAQLGILPAERLAKMLLRELASREQEK*
Ga0105248_113255802	3300009177	Switchgrass Rhizosphere	MSSLDWKGIEINWRGKRVKGRYIVSDDLVTVAAWNGTRTARLGIVPAERLAAMLLRELASETETK*
Ga0105238_107171984	3300009551	Corn Rhizosphere	MTSLEWMEVEIRWRGKLVKGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELASEEQEK*
Ga0105249_117354611	3300009553	Switchgrass Rhizosphere	MDSLDWKDIKINLGGKLIKGRYNVSDNLVTVAAWNGTKTAGLGVLPAVRLAQMLLRELVTEGETK*
Ga0134125_128707851	3300010371	Terrestrial Soil	MDSLDWKEIEINWRGKRIKGRYNVYERLVTVASWKGTKSAQLGVLPAERLAQMLLREIAAEEG*
Ga0134128_126132362	3300010373	Terrestrial Soil	SGMDSLDWKDIEINLGGKLIKGRYNVSDNLVTVAAWNGTKTAGLGVLPAVRLAQMLLRELVTEGETK*
Ga0134126_101562317	3300010396	Terrestrial Soil	MTSLEWMEVEIRWRGKLVKGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLR
Ga0134127_102499962	3300010399	Terrestrial Soil	MNSMDSMELEIMWRGKLVKGRYNVSDDLVTVAAWNGTEAARLGVLPAQRLAQMLLRELDAKGETK*
Ga0134122_119016382	3300010400	Terrestrial Soil	MSSLDWKEIEVRYRGKPIKGRYNVSDNLVTVAAWNGTKTAQLGILPAERLAQMLLRELAAQG*
Ga0134121_126362171	3300010401	Terrestrial Soil	MMPRGVNARAFWSISEMSSLDWKETEINWRGKRVKGRYNVSDGLVTVVAWNGTKTARVGILPAERLAQMLLRELAAQG*
Ga0105246_1000549211	3300011119	Miscanthus Rhizosphere	MTDDPLDWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0157313_10252652	3300012503	Arabidopsis Rhizosphere	DKIMSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTK*
Ga0157339_10577761	3300012505	Arabidopsis Rhizosphere	MSSVDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTK*
Ga0157342_10045961	3300012507	Arabidopsis Rhizosphere	MSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAA
Ga0157338_10323942	3300012515	Arabidopsis Rhizosphere	MSSLDWIDIEIVLRGKRVKGRYNVSEGLVTVAAWSRTNTAPLGILPAERLAKMLLRELAAEGTK*
Ga0157309_100157872	3300012895	Soil	VTIGVLTEISSLHWKEIEIRYRGKPVKGRFNVSDKLVTVAAWNGTKTGQLGILPAERLAQMLLRELAAQGEIK*
Ga0157299_101437131	3300012899	Soil	KDIEIVSQGKRVRGRYSVSDNLVTVAAWSGTKTAQLGILPAERLAKMLLRELASREQEK*
Ga0157292_100163743	3300012900	Soil	PLGWKDIEIKYRGKPVKGRYNASDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0157295_100488531	3300012906	Soil	MSSLDWKEIEITSRGKRVKGRYSVADDLVTVAAWNGTKTARLGVLPAERLAQML
Ga0157295_103569202	3300012906	Soil	MSSLDWKEIEIRYRGKPVKGRYSVSDNLVTVAAWNGTKTAQLGILSAERLAQMLLRELAAQGEIK*
Ga0164298_100723731	3300012955	Soil	MTDDPLGWKDIEIKYRGKPVKGRYNVSDYLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK*
Ga0164306_107109901	3300012988	Soil	MDSLDWKDIEINLGGKLIKGRYNVSDNLLTVAAWNGTKTAGLGVLPAVRLAQMLLRELVTEGETK*
Ga0164305_100309072	3300012989	Soil	MSSLDWREIEIKYRGKPGKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTK*
Ga0157378_114311641	3300013297	Miscanthus Rhizosphere	MSSLDWKEVEIKYRGKPVKGRYNVSDNLVTVAAWNGTKTAQLGILPAERLAQMLLRELAAQG*
Ga0163163_100637007	3300014325	Switchgrass Rhizosphere	MSSLDWKGIEINWRGKRVKGRYIVSDDLVTVAAWNGTRTARLGILPAERLAAMLLRELASETETK*
Ga0157376_101211632	3300014969	Miscanthus Rhizosphere	MTSLDWKQVEINYRGKSVKGRYNISDDLVTVAAWNGTKAAPLGILPAERLAKMLLRELAAESQTISDL*
Ga0157376_112437541	3300014969	Miscanthus Rhizosphere	MGSLHWKEIEVRYRGKLVKGRYYVSANLVTVAAWNGTKTAQLGILPAERLAQMLLRELAAQGEIK*
Ga0173480_108297892	3300015200	Soil	VTIGVLTEMSSLHWKEIEIRYRGKPVKGRFNVSDKLVTVAAWNGTKTGQLGILPAERLAEMLLRELAAQGEIK*
Ga0132258_101015574	3300015371	Arabidopsis Rhizosphere	MSSLDWQEIEIVWRGKRVKGRYNVSDGLVTAAAWNGTKTARLGILPAERLAKMLLRELAANGEAK*
Ga0132258_103831444	3300015371	Arabidopsis Rhizosphere	MSSLDWKDIEIVLRGKPVRGRYNVSEGLVTVAAWRGTNTAPLGILPAERLAKMLLRDLASREQEK*
Ga0132258_114282603	3300015371	Arabidopsis Rhizosphere	MNSLDWKEIEIVSRGKRLKGRYNVSEGLVTVAAWNGTNTAPLGILPAERLAKMLLRELAAEGTK*
Ga0132258_123042652	3300015371	Arabidopsis Rhizosphere	MSLENWKEIEINYCGKRFKGSYYVDDQRLVTVAAWNGTKTAKLGILPAERLAHMLLRDLASEQETK*
Ga0132258_124850881	3300015371	Arabidopsis Rhizosphere	MGSLDWIDIEIVLRGKRVKGRNNVSEGLVTVAAWRGTNTAPLGILPAERLVKMLLRELASREQEK*
Ga0132258_139446953	3300015371	Arabidopsis Rhizosphere	MSSLDWKDIEIVSQGKRVKRRYNVSEGLVTVAAWTGTNTAPLGILPAERLAKMLLRGLASREQEKIASSAR*
Ga0132256_1000876235	3300015372	Arabidopsis Rhizosphere	MSSLDRREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTK*
Ga0132257_1015904832	3300015373	Arabidopsis Rhizosphere	MSSLDWKEIKIRYRGKPVKGRYNVSDNLVTVAAWNGTKAAQLGILPAERLAQMLLRQLAAQGEIK*
Ga0132257_1019755082	3300015373	Arabidopsis Rhizosphere	DWQEIEIVWRGKRGKGRYNVSDGLVTAAAWNGTKTARLGILPAERLAKMLLRELAANGEAK*
Ga0132255_1011904593	3300015374	Arabidopsis Rhizosphere	MSSLDWIDIEIVLRGKRVKGRYNVSEGLVTVAAWSRTNTAPLGILPAERLAKMLLR
Ga0187788_100913692	3300018032	Tropical Peatland	MNSEQWKEIEIDYRGKRVKGRYVVSDKLVTVAAWNGMKTAQLGILPAERLAHMLLRELAFEQQ
Ga0184611_10450922	3300018067	Groundwater Sediment	MDAEHWEEVTIEYVGKTVKGRYNVSGGSVTVVAWNGSKTAQLGILPAERVAKMLLRALASEGD
Ga0173481_100255451	3300019356	Soil	REIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTK
Ga0173482_100009568	3300019361	Soil	MTSLEWMEVEIRWRGKLVKGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELASREQEK
Ga0173482_100113145	3300019361	Soil	MSSLDWKEIEITSRGKRVKGRYSVADDLVTVAAWNGTKTARLGVLPAERLAQMLLRELAAEGETK
Ga0247743_10394311	3300023067	Soil	QDNIMSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTK
Ga0247799_11076751	3300023072	Soil	MSSLDWKEIEINWRGKRAKGRYIVSDDLVTVAAWSGTKRARLGILPAERLAQMLLRELADDTEKL
Ga0247754_10079713	3300023102	Soil	ADVAMTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
Ga0247748_10041381	3300023168	Soil	ESADVAMTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
Ga0247796_10096512	3300023261	Soil	VTIGVLTEMSSLHWKEIEIRYRGKPVKGRFNVSDKLVTVAAWNGTKTGQLGILPAERLAQMLLRELAAQGEIK
Ga0247789_10014655	3300023266	Soil	ADITMTSLEWMEVEIRWRGKLVKGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELASREQEK
Ga0247789_10070042	3300023266	Soil	MTDDPLDWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
Ga0210132_10466332	3300025538	Natural And Restored Wetlands	MNSLDWKEIEITSRGKRVKGRYIVTDDNFVTVVAWNGTKTAQLGILPAERLVQML
Ga0210139_10397932	3300025558	Natural And Restored Wetlands	MNSLDWKEIEITSRGKRVKGRYIVTDDNFVTVVAWNGTKTAQLGILPAERLVQMLLRELAAEGTN
Ga0207696_10287922	3300025711	Switchgrass Rhizosphere	MTDDPLGWKDIEIKYRGKPVKGRYNASDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
Ga0207653_100109063	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLHWKEIEIRYRGKPVKGRFNVSDKLVTVAAWNGTKTGQLGILPAERLAQMLLRELADQGETK
Ga0207710_103970771	3300025900	Switchgrass Rhizosphere	MMPRGVNAGAFWSISEMSSLDWKETEINWRGKRVKGRYNVSDGLVTVAAWNGTKTARVGILPAERLAQMLLRELAVETETK
Ga0207645_1000472312	3300025907	Miscanthus Rhizosphere	MSSLHWKEIEIRYRGKPVKGRFNVSDKLVTVAAWNGTKTGQLGILPAERLAQMLLRELAAQGEIK
Ga0207660_107977941	3300025917	Corn Rhizosphere	MDSLDWKDIEINLGGKLIKGRYNVSDNLVTVAAWNGTKTAGLGVLPAVRLAQMLLRELVTEGETK
Ga0207662_107928961	3300025918	Switchgrass Rhizosphere	MSSLDWKETEINWRGKRVKGRYNVSDGLVTVAAWNGTKTARVGILPAERLAQMLLRELAVETETK
Ga0207652_115714411	3300025921	Corn Rhizosphere	MSSMDWMELEIMWRGKLVKGRYNVSDDLVTVAAWNGTEAARLGVLPAQRLAQMLLRELAAKGETK
Ga0207652_116297601	3300025921	Corn Rhizosphere	MMPRGVNAGAFWSISEMSSLDWKETEINWRGKRVKGRYNVSDGLVTVAAWSGTKRARLGILPAERLAQMLLRELADDTEKL
Ga0207650_1000278914	3300025925	Switchgrass Rhizosphere	WKDIEIKYRGKPVKGRYNASDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
Ga0207650_102754583	3300025925	Switchgrass Rhizosphere	MSSLDWKGIEINWRGKCVKGRYIVSDDLVTVAAWNGTRTARLGILPAERLAAMLLRELASETETK
Ga0207701_101967553	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MMPRGVNARAFWSISEMSSLDWKETEINWRGKRVKGRYNVSDGLVTVAAWNGTKTARVGILPAERLAQMLLRELAVETETK
Ga0207691_104715633	3300025940	Miscanthus Rhizosphere	MSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELA
Ga0210078_10161201	3300025979	Natural And Restored Wetlands	MSAEGWNEVTIEWRGKTVKGTYCVSDRLITVAAWTGTKTAQLGILPAERLAKMLLRELAFEEGDKKL
Ga0207708_106146052	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	CPQDKIMSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTK
Ga0207708_116854781	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLDWIDIEIVLRGKRVKGRYNVSEGLVTVAAWRGTNTAPLGILPAERLAKMLLRELASREQGK
Ga0207683_114214141	3300026121	Miscanthus Rhizosphere	GVFSGMDSLDWKDIKINLGGKLIKGRYNVSDNLVTVAAWNGTKTAGLGVLPAVRLAQMLLRELVTEGETK
Ga0207512_1021661	3300026709	Soil	MSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAAEGTG
Ga0208889_10087471	3300026891	Soil	MSSLDWKEIEIVLRGKRVKGPYNVSEGLVTVAAWSGTNTAPLGILPAERLAKKCCCAI
Ga0207434_10116253	3300026952	Soil	MTSLEWMEVEIRWRGKLVKGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELA
Ga0207467_10028113	3300027036	Soil	VAMTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
Ga0207435_1014463	3300027390	Soil	ADVAMTDDPLDWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADDTEKL
Ga0207472_1020501	3300027427	Soil	KYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
Ga0207504_1008641	3300027455	Soil	MTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGET
Ga0209971_10077074	3300027682	Arabidopsis Thaliana Rhizosphere	MTDDPLGWKDIEIKYRGKPVKGRYNVSDNLVAVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
Ga0209073_105066331	3300027765	Agricultural Soil	MSSLDWNEIEIRSRGRRVRGRYNVSDNLVTVAAWSGTKAAPLGILPAERLAKMLLRELAAQGQEE
Ga0207428_103744631	3300027907	Populus Rhizosphere	MSSLDWKEIEINWRGRRAKGRYIVSDDLVTVASASGTKRARLGILPAERLAQMLLRELADDTEKL
Ga0268264_122907931	3300028381	Switchgrass Rhizosphere	KETEINWRGKRVKGRYNVSDGLVTVAAWNGTKTARVGILPAERLAQMLLRELAVETETK
Ga0247828_111385662	3300028587	Soil	MSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRELAADGSI
(restricted) Ga0255311_10253521	3300031150	Sandy Soil	MSSLDWKEIEIRSRGKRVKGRYSVSDDLVTVAAWNGTKSARLGILPAERLAQMLLRELAAEGETK
(restricted) Ga0255310_100783361	3300031197	Sandy Soil	WKEIEIRSRGKRVKGRYSVSDDLVTVAAWNGTKSARLGILPAERLAQMLLRELAAEGETK
(restricted) Ga0255312_10171104	3300031248	Sandy Soil	LKIIREGHRSGEVRSWKEIEVRSHSKRVKGRYCVADDLVTVAAWNGTKTARLGVLPAERLAQMLLRELVAKGEKE
Ga0310888_108418971	3300031538	Soil	MSSLDWIDIEIVLRGKRVKGRYNVSEGLVTVAAWSRTNTAPLGILPAERLAKMLLRELASREQEK
Ga0310813_1000204113	3300031716	Soil	MSSPGWKEIEIRSRGKRVKGRYSVSDDVVTVAAWNGTKTARLGILPAERLAQLLLRELADEAKPN
Ga0310813_101100835	3300031716	Soil	MTSLDWKEVEIKYRGKPVKGRYNVSDDVVTVAAWNGTKTAQLGILPAERLAQMLLRELAAEGTG
Ga0310813_107426792	3300031716	Soil	PAAQAANHAAMVSPSSRAVEVLWRRKLVKGRVSDRVVTVAAWNGTRTAPLGILPAERLAKMLLRELADEAEKK
Ga0310813_119200641	3300031716	Soil	MNSLDWKEIEIKCRGKPVKGRYNVSDDLVTVAAWNGTKTAQLGILPAERLAQMLLRELAAEGTK
Ga0310900_100423374	3300031908	Soil	DPLGWKDIEIKYRGKPVKGRYNVSDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
Ga0310891_101352623	3300031913	Soil	LGWKDIEIKYRGKPVKGRYNASDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK
Ga0310901_104096552	3300031940	Soil	MGRYHQMSLENWKEIEINYCGKRFKGSYYVDDQRLVTVAAWNGTKTAKLGILPAERLAHMLLRDLASEQETK
Ga0310903_105057131	3300032000	Soil	TMTSLEWMEVEIRWRGKLVKGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELASREQEK
Ga0310889_102536902	3300032179	Soil	MTSLEWMEVEIRWRGKLVNGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELASREQEK
Ga0307471_1011772381	3300032180	Hardwood Forest Soil	MDVEHWEEVTIEYVGKTVKGRYNVSGGSVTVVAWNGSKTAQLGILPAERVAKMLLRALASEGD
Ga0310812_101031184	3300032421	Soil	WKEIEIRSRGKRVKGRYSVSDDVVTVAAWNGTKTARLGILPAERLAQLLLRELADEAKPN
Ga0310812_101641511	3300032421	Soil	MSSLDWREIEIKYRGKPVKGRYNFSDNVVTVAAWNGTKAAQLGILPAERLAQMLLRQLAENGQNRS
Ga0335084_124480681	3300033004	Soil	MTSLDWKEVEIKYRGKPVKGRYNVSDDVVTVAAWNGTKTAQLGILPAERLAQMLLRELAAEGTR
Ga0310810_105101241	3300033412	Soil	MADAAWKQIEIKSRGKVVKGRYNVSDNVVTVAAWNGTRTAPLGILPAERLAKMLLRELVSQTKEK
Ga0373948_0002471_1819_1998	3300034817	Rhizosphere Soil	MEVEIRWRGKLVKGRYNISDDLVTVAAWNGTKAARLGILPAERLAKMLLRELASREQEK
Ga0373950_0041616_686_880	3300034818	Rhizosphere Soil	DPLGWKDIEIKYRGKPVKGRYNASDNLVTVVAWSGTKTARLGVLPAERLAKMLLRELADQGETK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters