Metagenome / Metatranscriptome Family F082646

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F082646
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	132 residues
Representative Sequence	VGYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTVGLETAAKRYAGSLTQGDPSLDKFLPFTLAGDDRRWIAVRTRFGNCGRFAAGASQTYTRFNVTYSVLGFTKDAWVPLPKDIGVDSPPDFACPTRAA
Number of Associated Samples	98
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.60 %
% of genes near scaffold ends (potentially truncated)	93.81 %
% of genes from short scaffolds (< 2000 bps)	92.92 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (97.345 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand (15.044 % of family members)
Environment Ontology (ENVO)	Unclassified (34.513 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.053 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.82% β-sheet: 42.33% Coil/Unstructured: 47.85%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF01833	TIG	1.77
PF09594	GT87	0.88
PF02371	Transposase_20	0.88
PF00353	HemolysinCabind	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.81 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	93.81 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	89.38 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	2.65 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	89.38 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	2.65 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	89.38 %
Nitriliruptoraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae	2.65 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	89.38 %
Nitriliruptor	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor	2.65 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	89.38 %
Nitriliruptor alkaliphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	2.65 %
Unclassified	root	N/A	2.65 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig526652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
2170459017\|G14TP7Y01DCTXV	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
2228664021\|ICCgaii200_c1066235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300005347\|Ga0070668_100334389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1278	Open in IMG/M
3300005354\|Ga0070675_101261851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300005406\|Ga0070703_10037616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1492	Open in IMG/M
3300005471\|Ga0070698_100729406	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005577\|Ga0068857_101524878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300005840\|Ga0068870_10023692	All Organisms → cellular organisms → Bacteria	3030	Open in IMG/M
3300006581\|Ga0074048_10052617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	563	Open in IMG/M
3300006844\|Ga0075428_100611411	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300006845\|Ga0075421_101943240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	628	Open in IMG/M
3300006853\|Ga0075420_101512557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → Nitriliruptoraceae → Nitriliruptor → Nitriliruptor alkaliphilus	575	Open in IMG/M
3300006880\|Ga0075429_100314508	All Organisms → cellular organisms → Bacteria	1371	Open in IMG/M
3300006969\|Ga0075419_10475670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300006969\|Ga0075419_11515557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300009081\|Ga0105098_10598442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300009094\|Ga0111539_12093157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	656	Open in IMG/M
3300009148\|Ga0105243_10255464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1567	Open in IMG/M
3300009156\|Ga0111538_12318550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300009162\|Ga0075423_12074217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300009801\|Ga0105056_1020609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	808	Open in IMG/M
3300009806\|Ga0105081_1020702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	809	Open in IMG/M
3300009807\|Ga0105061_1098874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300009811\|Ga0105084_1077577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300009812\|Ga0105067_1041896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300009815\|Ga0105070_1060800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300009818\|Ga0105072_1068040	Not Available	691	Open in IMG/M
3300009818\|Ga0105072_1103309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	573	Open in IMG/M
3300009819\|Ga0105087_1039563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300009836\|Ga0105068_1114582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300010029\|Ga0105074_1124248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300010037\|Ga0126304_10029470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3212	Open in IMG/M
3300010362\|Ga0126377_12485056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300010399\|Ga0134127_11953797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300011000\|Ga0138513_100059018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	586	Open in IMG/M
3300011119\|Ga0105246_10926589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300011119\|Ga0105246_11458593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300011119\|Ga0105246_12382454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300012021\|Ga0120192_10096358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300012204\|Ga0137374_10146989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2113	Open in IMG/M
3300012204\|Ga0137374_10497202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	948	Open in IMG/M
3300012353\|Ga0137367_10105950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2070	Open in IMG/M
3300012353\|Ga0137367_10758518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300012354\|Ga0137366_11077921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300012355\|Ga0137369_10436084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300012358\|Ga0137368_10204792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1400	Open in IMG/M
3300012939\|Ga0162650_100096390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300013307\|Ga0157372_12803433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300014326\|Ga0157380_10464551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1219	Open in IMG/M
3300014745\|Ga0157377_11304223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300015373\|Ga0132257_100592999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1368	Open in IMG/M
3300018028\|Ga0184608_10375753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300018031\|Ga0184634_10179215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	959	Open in IMG/M
3300018053\|Ga0184626_10289255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300018056\|Ga0184623_10308497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300018063\|Ga0184637_10053026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2476	Open in IMG/M
3300018063\|Ga0184637_10412174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300018072\|Ga0184635_10104270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1122	Open in IMG/M
3300018075\|Ga0184632_10454294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300018076\|Ga0184609_10095342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1331	Open in IMG/M
3300018081\|Ga0184625_10087868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1595	Open in IMG/M
3300018082\|Ga0184639_10618382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300018465\|Ga0190269_11123783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300018469\|Ga0190270_10824321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300018469\|Ga0190270_11972676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300018469\|Ga0190270_12233076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300018476\|Ga0190274_11483179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300018476\|Ga0190274_12166650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300019259\|Ga0184646_1620181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	918	Open in IMG/M
3300019269\|Ga0184644_1789192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300019884\|Ga0193741_1032883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1339	Open in IMG/M
3300020003\|Ga0193739_1162328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300020005\|Ga0193697_1131178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300021073\|Ga0210378_10133901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300022534\|Ga0224452_1244100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300025932\|Ga0207690_10832610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300025935\|Ga0207709_10861171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300026116\|Ga0207674_11504046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300026116\|Ga0207674_11558874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300026891\|Ga0208889_1012641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300027379\|Ga0209842_1039846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300027561\|Ga0209887_1003871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4358	Open in IMG/M
3300027561\|Ga0209887_1016087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1860	Open in IMG/M
3300027577\|Ga0209874_1153225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300027657\|Ga0256865_1115223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	692	Open in IMG/M
3300027722\|Ga0209819_10262632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300027909\|Ga0209382_11993282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300027948\|Ga0209858_1010950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300027949\|Ga0209860_1011095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1221	Open in IMG/M
3300028597\|Ga0247820_10829687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300028811\|Ga0307292_10423284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300028812\|Ga0247825_10747484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300028814\|Ga0307302_10050063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1944	Open in IMG/M
3300028819\|Ga0307296_10103049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1530	Open in IMG/M
3300030336\|Ga0247826_11501981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300030336\|Ga0247826_11612976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300030619\|Ga0268386_10212141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1445	Open in IMG/M
3300031731\|Ga0307405_11452846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300031740\|Ga0307468_100816559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300031908\|Ga0310900_10629239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300032211\|Ga0310896_10305736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300033407\|Ga0214472_11087810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300033551\|Ga0247830_10197309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1501	Open in IMG/M
3300034113\|Ga0364937_046452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300034115\|Ga0364945_0027914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1508	Open in IMG/M
3300034149\|Ga0364929_0224985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300034176\|Ga0364931_0074321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1054	Open in IMG/M
3300034176\|Ga0364931_0119976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300034417\|Ga0364941_057784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	880	Open in IMG/M
3300034690\|Ga0364923_0049592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.45%
Host-Associated	Host-Associated	25.66%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.41%
Plants	Host-Associated → Plants	25.66%
Aquatic	Environmental → Aquatic	15.04%
Solid Waste	Engineered → Solid Waste	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.35%
Sediment	Environmental → Aquatic → Sediment	10.62%
Floodplain	Environmental → Terrestrial → Floodplain	6.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.31%
Freshwater	Environmental → Aquatic → Freshwater	4.42%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.77%
Grass	Engineered → Solid Waste → Grass	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.70%
Sand	Environmental → Terrestrial → Soil → Sand	15.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.62%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	6.19%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.65%
Loam	Environmental → Terrestrial → Soil → Loam	1.77%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Composting	Engineered → Solid Waste → Grass → Composting	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.70%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	15.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.19%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	6.19%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	15.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.39%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.19%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	6.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.42%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.77%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300009807	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012021	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026891	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB (SPAdes)	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027948	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_10190990	2124908045	Soil	TFSFGFMLVNDGPVPLKIQRIHLTGQDELLIPVRLETATKRYAGSLGEGDPFLEKFLPFTLAGGDRRWVVVRTTFGNCDRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPRDSGCPARAT
4ZMR_01953880	2170459017	Switchgrass, Maize And Mischanthus Litter	VAFAVRYQPVSSANFASGPVTESGHMVRVGYTNGGTFSFGFMLVNSGPVPLKIQRIHLTGQDELLIPVRLETATKRYAGSLGVGDPDLEKFIPFTLGGSDRRWIVVRTRFANCGRFEADAFETYTQFQVTYGVLGFTKHAWVSLPKDIRVDSPPD
ICCgaii200_10662351	2228664021	Soil	LPVKIQRIQVTGQNHLLVTAGIETAAQRYAGSLTQGDPSLDKFLPFTLAGGDRRWIVVRTRFGNCANFDPGDLDTVTHFNVTYSVLGFTKNAVVPLPKDIGVDSPPDFACPTRAA
Ga0070668_1003343892	3300005347	Switchgrass Rhizosphere	GQNDLLVTAGIETAAKRYAGSLALGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAV*
Ga0070675_1012618511	3300005354	Miscanthus Rhizosphere	VRVAYANGGTFSFGFLVVNDGPLPVKIQAIRVTGQNDLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAV*
Ga0070703_100376161	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	PLPVKIQSIRVTGQNDLLVTVGLATAAKRYAGSLAQGDPSLDKFLPFTLAGDDRRWIAVRTRFGNCGRFVAGDSQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVA*
Ga0070698_1007294061	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VTGQNDLLVTVGLETAAQRYAGSLAQGDPSLDKFLPFTLAGGERRWIAVRARFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDVGVDSPPDFACPTRAA*
Ga0068857_1015248781	3300005577	Corn Rhizosphere	YQPLTAANFASGPVTSSGANVVRVGYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLATVGLETAAKRYAGSLAQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFVAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVP*
Ga0068870_100236923	3300005840	Miscanthus Rhizosphere	VNDGPLPVKIQRIHVTGQNDLLATVGLETAAKRYAGSLAQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFVAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVA
Ga0074048_100526171	3300006581	Soil	FLVVNDGPLPVKIQRIEVTGQSDLLVTVGLETAALRYAGSLRQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFAAGALEMYTRFKVTYSVLGFTKHAWVPLPKDVGVDSPPDYACPTRAA*
Ga0075428_1006114111	3300006844	Populus Rhizosphere	FLIVNDGQLPVSIQRIQMTGQSHLLIPVRVETAAQRYAGGLSEVDPSLDKFHPFTLAGGDRRWIVVRTRFGNCDRFAAGASETYTRFQVTYRVLGFTKHAWVELPKDIAVGSPPDLACPARAA*
Ga0075421_1019432401	3300006845	Populus Rhizosphere	SGANVVRVAYANGGTFSFGFLVVNDGPLPVKIQRIQVTRQNDLLVTVGLETAAQRYAGSLTQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFVAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFLCPTRAA*
Ga0075420_1015125571	3300006853	Populus Rhizosphere	FSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTVGLEMAAKRYAGSLSPGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFVAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFLCPTRAA*
Ga0075429_1003145081	3300006880	Populus Rhizosphere	NGGTFSFGFLIVNDGQLPVKVQGIQITGQNQLLVPVRLETAAKRYAGSLSELDPSLEKFLPFTLAGGDRRWIVVRTRFGNCGRFAAGTSETYTRFKVTYSVLGLTKHAWVPLPKDIAVDSPPDFACPTRAV*
Ga0075419_104756702	3300006969	Populus Rhizosphere	TSSGPNMVRVGYANGGTFSFGFLIVNDGQLPVKVQGIQITGRNQLLVPVRLETAAKRYAGSLSEFDPSLEKFLPFTLAGGDRRCIVVRTRFGNCGRFAAGTSETYTRFKVTYTVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA*
Ga0075419_115155571	3300006969	Populus Rhizosphere	SGPVTSSGANVVRVAYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTVGLETAAQRYAGSLTQGDPSLDKFLPFTLAGGERRWIAVRARFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIAVDSPPDFACPTRAV*
Ga0105098_105984421	3300009081	Freshwater Sediment	NGGTFSFGFLIVNDGQLPVKVQGIQITGQNQLLVPVRLETAAKRYAGSLGEGDPSLEKFIPFTLAGGDRRWILVRTRFANCGRFAAGTSETYTRFKVTYTVLGLTKHAWVPLPKDIGVDSPPDYACPTRAA*
Ga0111539_120931571	3300009094	Populus Rhizosphere	ASGPVTSSGANVVRVGYANGRTFSFGFLVVNDGPLPVKIQRIQVTGKNDLLVTVGLESAAKRYAGSLAQGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCGRFIAGASQTYTRFNVTYSVLGFTKHASIQLPKDIGVNSPPDYACPSRVA*
Ga0105243_102554642	3300009148	Miscanthus Rhizosphere	RIQVTGQNDLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTFSVLGFTKHAWVSLPKDIGVDSPPDLACPTRAV*
Ga0111538_123185502	3300009156	Populus Rhizosphere	AIRVTGQNDLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAV*
Ga0075423_120742172	3300009162	Populus Rhizosphere	VKIQAIRVTGQNDLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAV*
Ga0105056_10206092	3300009801	Groundwater Sand	GFMLVNDGPVPLKIQRIQLSGQKELLIPVRLETAAKRDAGSLGVGDPDLEKFVPFTLDGSDRRWIVVRTRFANCGRFEADAFETYTQFQVTYSVLGFTKHAWVSLPKDIRVDSPPDYACPARAA*
Ga0105081_10207022	3300009806	Groundwater Sand	VNDGPLPLKIQRIQLTGQDELLIPVRLETAAKRDAGSLGVGDPDLEKFIPFTLDGGDRRWIVVRTRFANCGRFQADAFETYTQFQVTFGALGLTKHAWVPLPKDIRVDSPPDYACPARAA
Ga0105061_10988742	3300009807	Groundwater Sand	PVKIQRIQVTGQNDLLVTAGIETAAKRYAGSLALGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIRVDSPADYACPARAA*
Ga0105084_10775772	3300009811	Groundwater Sand	FSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTFGLETAPKRYAGSLAEGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPQGIGVDSPPDSACPTRAA*
Ga0105067_10418962	3300009812	Groundwater Sand	PLSAANFASGTVTESGPNMIRLEYASGGTFTFGFLLVNDGPLPLKIQRIQLTGQDELLIPVRLETAAKRDAGSLGVGDPDLEKFVPFTLDGGDRRWIVVRTRFANCGRFQADAFETYTQFQVTFGALGLTKHAWVPLPKNIRVDSPPDYACPARAD*
Ga0105070_10608001	3300009815	Groundwater Sand	NFASGPVTESGHMVRVNYANGGTFSFGFMLVNGGPVPLKIQRIHLTGQDELLIPVRLETATKRYAGSLGMGDPDLEKFIPFTLDGGDRRWIVVRTRFANCGRFQADAFETYTQFQVTFGALGLTKHAWVPLPKDIRVDSPPDYACPARAD*
Ga0105072_10680401	3300009818	Groundwater Sand	IQFTGQNDLLVTVGLETAAKRYARSLAEGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCANSDEGVIRTYTHITMTYRVLGFTKSAIVPLPKDIGVESPPDYACPTRAA*
Ga0105072_11033091	3300009818	Groundwater Sand	SVAQADSKMVRVGYENGGTFSFGFLVVNDGPLPVKIQAIQVTGQSELMVTVGLQTAAKSDAGSLAQGDPSLDKFLPFTLTGGDRRWVVVRTRFGNCGRFAAGALETYTRFKVTYSVLGFTKHAWVSLPKHIGVDSPPDFACPTRAA*
Ga0105087_10395632	3300009819	Groundwater Sand	FGFLIVNDGQLPVKVQGIQITGQSQLLVPVRLETAAKRYAGSLSEFDPSLEKFLPFTLAGGDRRWIVVRTRFGNCGRFAAGTSETYTRFKVTYSVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA*
Ga0105068_11145821	3300009836	Groundwater Sand	TGQNDLLVTIGLETAAKRYAGSLTQGDPSLDKFLPFTLAGGDRRWIVVRTRFGNCGRFVAGASQTYTRFNVTYRVLGFTKSAIVPLPKDIGVESPPDYACPTRAA*
Ga0105074_11242481	3300010029	Groundwater Sand	SGANVVRVGYVNGGSFSLGFLLVNDGPLPVQIQRIQFTGQNDLLVTAGIETAAKRYAGSLALGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYRVLGFSKSAIVPLPKDIGVDSPPDFACAARVA*
Ga0126304_100294701	3300010037	Serpentine Soil	LAAANFASGPVTSSGANVVRVGYVDGGTFSFGFLLVNDGPLPVKIQRIQVIGQNDLLVTAGLETAPKRYAGSLGEGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCDRFAAGASQTYTRFNVTYSVLGFTKSAVVPLPKDVGVESPPDYACPARAA*
Ga0126377_124850561	3300010362	Tropical Forest Soil	ERPVARSDQNMVRVAYENGGTFSFGFLIVNEGQLPVRIQKIQVTGQNELLVPVRVETAAKRYAGSLGEGDASLERFLPFTLAGTDRRWIVIRARFGNCGRFAAGSFETYTRFQVTFTVLGLTKHVWIPLPKDIGVDSPPDYACPARTA*
Ga0134127_119537972	3300010399	Terrestrial Soil	IQAIRVTGQNDLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAV*
Ga0138513_1000590181	3300011000	Soil	TGQNDRLVTGGIETAAKRYAGSLALGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAA*
Ga0105246_109265891	3300011119	Miscanthus Rhizosphere	ANGGTFSFGFLLVNDGPLPVKIQSIRVTGQNDLLATVGLETAAKRYAGSLAQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFVAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVA*
Ga0105246_114585932	3300011119	Miscanthus Rhizosphere	VKVQSIQITGQSELLVTVGLETAPKRDAGSLAQGDPSLDKFLPFTLAGSDRRWIVVRTRFGNCGRFAAGALETYTRFKVTYSVLGLTKHAWVPLPKDIGVDSPPDFACPSRVA*
Ga0105246_123824541	3300011119	Miscanthus Rhizosphere	GYANGGTFSFGFLLVNDGPLPVKIQSIRVTGQNDLLVTVGLETAAKRYAGSLAQGDPSLDKFLPFTLAGDDRRWIAVRTRFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVA*
Ga0120192_100963582	3300012021	Terrestrial	AGTFTFGFLLVNDGPLPVKIQRIQVIGKNDLLVTVGLETAPKRYAGSLGEGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCDRFAAGASQTYTRFNVTYSVLGFTKSAVVPLPKDVGVESPPDYACPARAA*
Ga0137374_101469893	3300012204	Vadose Zone Soil	SGANVVRVGYTNGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTIGLETAGKQYAGSLAQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFVAGASQTYTRFNVTYTVLGFTKSAWVPLPKDIGVDSPPDYACPTRAA*
Ga0137374_104972022	3300012204	Vadose Zone Soil	VGYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTVGLETAAKRYAGSLTQGDPSLDKFLPFTLAGDDRRWIAVRTRFGNCGRFAAGASQTYTRFNVTYSVLGFTKDAWVPLPKDIGVDSPPDFACPTRAA*
Ga0137367_101059504	3300012353	Vadose Zone Soil	GTFSFGFLLVNDGPLPLNIQRIQLTGQNELLIPVRLETAAKRDAGSLGVGDPDLEKFIPFTLDGGDRRWIVVRTRFANCGRFEADAFETYTQFQVTFGALGLTKHAWVPLPKNIRVDSPPDYACPARAA*
Ga0137367_107585182	3300012353	Vadose Zone Soil	ANFASGTVTESGPGMIRLEYANGGTFSFGFLLVNDGPLPLKIQRIQLTGQDELLIPVRLETAAKRDAGSLGVGDPDLEKFIPFTLDGGDRRWIVVRTRFANCGRFEADAFETYTQFQVTFGALGLTKHAWVPLPKDIRVDSPPDYACPARAA*
Ga0137366_110779211	3300012354	Vadose Zone Soil	MIRLEYANGGTFSFGFLLVNDGPLPLKIQRIQLTGQDELLIPVRLETAAKRDAGSLGVGDPDLDKFIPFTLDGGDRRWIVVRTRFANCGRFEADAFETYTQFQVTFGALGLTKHAWVPLPKNIRVDSPPDYACPARAA*
Ga0137369_104360842	3300012355	Vadose Zone Soil	RVGYANGGTFSFGFLVVNDGPLPVKIQGIQVTGQNDLLVTVGLETAAKRYAGSLGQGDPSLDRFLPFTLAGGDRRWIAVRTAFGNCGRFVAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDYACPTRAA*
Ga0137368_102047923	3300012358	Vadose Zone Soil	RIQLTGQNELLIPVRLETAAKRDAGSLGVGDPSLDKFIPFTLDGGDRRWIVVRTRFANCGRFEADAFETYTQFQVTFGALGLTKHAWVPLPRDIRVDSPPDYACPARAA*
Ga0162650_1000963901	3300012939	Soil	MVRVGYANGGTFSFGFLVVNDGSLPVKIQAIQITGQSQLLVPVRLETAAKRYAGSLGEGDPSLEKFLPFTLAGGDRRWIVVRTRFGNCGRFAAGASETYTRFKVTYSVLGLTKHAWVPLPKDIGVDSPPDYACPTRAA*
Ga0163162_130211821	3300013306	Switchgrass Rhizosphere	DLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAV*
Ga0157372_128034331	3300013307	Corn Rhizosphere	NDGPLPVKIQAIRVTGQNDLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVPYSVLAFTKHAWVSLPKDIGVDSPPDLACPTRAV*
Ga0157380_104645512	3300014326	Switchgrass Rhizosphere	VVNDGPLPVKIQRIQVTGQNDLLATVGLETAAKRYAGSLAQGDPSLDKFLPFTLAGSDRRWIVVRTRFGNCGRFVAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVP*
Ga0157377_100391023	3300014745	Miscanthus Rhizosphere	LLVTVGLATAAKRYAGSLAQGDPSLDKFLPFTLAGDDRRWIAVRTRFGNCGRFVAGDSQTYTRFNVTYSVLGFTKHAWVALPKDIGVDSPPDFACPSRVA*
Ga0157377_113042232	3300014745	Miscanthus Rhizosphere	RVTGQNDLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAV*
Ga0132257_1005929992	3300015373	Arabidopsis Rhizosphere	FASESVAQSDSKMARVGYENGGTFSFGFLVVNDGPLPVKVQSIQITGQSELLVTVGLETAPKRDAGSLAQGDPSLDKFLPFTLAGSDRRWIVVRTRFGNCGRFAAGALETYTRFKVTYSVLGLTKHAWVPLPKDIGVDSPPDFACPSRVA*
Ga0184608_103757531	3300018028	Groundwater Sediment	TSSGANVVRVAYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTAGIETAAKRYAGSLALGDPSLDKFLPFTLAGGDRRWIAIRTRFGNCGRFVAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDLACPTRAV
Ga0184634_101792151	3300018031	Groundwater Sediment	PLPVKIQRIQVTGQNDLLVTVGLESAAKRYAGSLAQGDPSLDKFLPFTLAGGDRRWIVVRTRFGNCANLDPGDSEAYTQFDVTYSVLGFTKHAFVPLPKDVGVDSPPDFACPTRAA
Ga0184626_102892552	3300018053	Groundwater Sediment	ASGGTFSFGFLVVNDGSLPVKIQAIQITGQSQLLVPVRLETAAKRYAGSLSEFDPSLEKFLPFTLAGGDRRWIVVRTRFGNCADFEAGDLDTYTHFNVTYSVLGFTKHALVPLPKDIGVDSPPDFACPTRA
Ga0184623_103084972	3300018056	Groundwater Sediment	FAVRYQPLSAANFASGPVTESGNMVRLEYANGGTFSFGFLLVNDGPLPLKIQRIQVTGQSELLIPVRLETAAKRDAGSLGVGDPDLEKFIPFTLDGGDRRWIVVRTRFANCGRFAAGAFETYTQFQVTFGALGLTKHAWVALPKDIRVDSPPDYACPARAA
Ga0184637_100530264	3300018063	Groundwater Sediment	VNDGSLPLRIQAIQITGQSQLLVPVRLETATKRYAGSLGEGDPSLEKFIPFTLAGGDRRWIVVRTRFGNCCRFAEGTSETYTRFKVTYSVLGLTKHAWVQLPKDIAVDSPPDYACPTRAA
Ga0184637_104121742	3300018063	Groundwater Sediment	YQPLSAANFASGPVTSSGPNMVRVGYANGGTFSFGFLIVNEGQLPVEIQEIQITGQSQLLVPVRLETASKRYTGSLGEGDPSLDRFLPFSLAGGDRRWIVVRTRFANCGRFAAGAFETYTQFKVTYSVLVFTKHAWVPLPKDIGVDSPPDFACPTRAA
Ga0184635_101042702	3300018072	Groundwater Sediment	YANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLITVGLETAAQRYAGSLAQGDPSLDKFLPFTLAGGERRWIAVRARFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDVGVDSPPDFACPTRAA
Ga0184632_104542941	3300018075	Groundwater Sediment	TGQSQLLVPVRLETASKRYAGSLGEGDPSLEKFLPFTLAGGDRRWIVVRTRFGNCGRFAAGASETYTRFKVTYSVLGFTKHAWVPLPKDIGVDSPPDYACPTRAA
Ga0184609_100953422	3300018076	Groundwater Sediment	FLVVNDGPLPVKIQRIQVTGQNDLLVTVGLETAAQRYAGSLTQGDPSLDKFLPFTLAGGDRRWIAVRTHFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFGCPTRAA
Ga0184625_100878682	3300018081	Groundwater Sediment	ANFASGPVTSSGANVVRVGYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLITVGLETAAQRYAGSLAQGDPSLDKFLPFTLAGGERRWIAVRARFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDVGVDSPPDFACPTRAA
Ga0184639_106183821	3300018082	Groundwater Sediment	AVRYQPLTSVNFASGPVTSSGANVVRVAYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTAGIATAAKRYAGSLALGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDLACPTRAV
Ga0190269_111237831	3300018465	Soil	DGPLPVKVQSIQITGQRELLVTVGLESAPKRDAGSLTLGDPSLDKFLPFTLAGSDRRWIVVRTRFANCGRFAAGASETYTRFKVTYSVFGLTKQAWVPLPKDIGVDSPPDYACPTRAA
Ga0190270_108243212	3300018469	Soil	FASGPVTSSGPNIVRVGYANGGTFSFGFLIVNDGQLPVKVQAIQITGQNQLLVPIRLETAAKRYAGSLSELDPSLEKFLPFTFAGGDRRWIVVRTRFGNCGRFAAGTSETYTRFKVTYTVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA
Ga0190270_119726761	3300018469	Soil	VRVGYANGGTFSFGFLIVNEGQLPVKIQGIQITGQSQLLVPVRLETAAKRYTGSLSESDPSLEKFIPFTLAGGDRRWIVVRTRFANCGRFAAGASETYTRFKVTYSVFGLTKQAWVPLPKDIGVDSPPDYACPTRAA
Ga0190270_122330761	3300018469	Soil	RVGYANGGTFSFGFLIVNDGQLPVKVQGIQITGQNQLLVPVRLETAAKRDAGSLGEFDPSLEKFLPFTLAGDDRRWIVVRTQFGNCGRFAAGTSETYTRFKVTYTVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA
Ga0190274_114831791	3300018476	Soil	VDGGAFSFGFLLVNDGPLPVKIQKIQVIGQNDLLVMAGLETAPKRYAGSLGEGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCDRFAAGAWQTYTRFNVTYSVLGFTKSAVVPLPKDVGGEPPPDYACPTRAD
Ga0190274_121666502	3300018476	Soil	PVKIQRIQVIGQNDLLVTVGLETAPKRYAGSLGQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCDRFAAGAFQTYTRFNVTYSVLGFTKNAVVPLPKDVGVESPPDSACPTRA
Ga0184646_16201811	3300019259	Groundwater Sediment	GTFSFGFLLVNDGPLPLKIQGIQVTGQSELLIPVRLETAAKRDAGSLGVGDPDLEKFIPFTLDGGDRRWIVVRTRFANCGRFAAGAFETYTQFQVTFGTLGLTKHAWVPLPKDIRVDSPPDYACPARAA
Ga0184644_17891921	3300019269	Groundwater Sediment	VRYQPMTAANFASGPVTSSGANVVRVAYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTVGLETAAQRYAGSLTQGDPSLDKFLPFTLAGGERRWIAVRARFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDLACPTRAV
Ga0193741_10328831	3300019884	Soil	NMVRVGYANGGTFSFGFLIVNDGQLPVKIQGIQITGQSQLLVPVRLETATKRYAGSLGEGDPSLEKFIPFTLAGDDRRWIVVRTRFGNCGRFAAGASETYTRFKVTYSVLGFTKHAWVPLPKDIGVDSPPDYACPTRAA
Ga0193739_11623281	3300020003	Soil	VSAANFASGPVTSSGPNMVRVGYANGGTFSFGFLIVNDGSLPLRIQAIQITGQSQLLVPVRLETATKRYAGSLGEGDPSLEKFLPFTLAGGDRRWIVVRTRFGNCGRFAAGTSETYTRFKVTYSVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA
Ga0193697_11311781	3300020005	Soil	PLKAANFASGSVTSSGANVVRVGYTTGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTVGLETAAQRYAGSLTQGDPSLDKFLPFTLAGGDRRWIAVRTHFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIAVDSPPDFACPTRAA
Ga0210378_101339012	3300021073	Groundwater Sediment	ANGGTFSFGFLLVNDGPLPLKIQRFKLTGQDELLIPVRLETAAKRDAGSLGVGDPDLDKFVTFTLAGGDRRWIVVRTRFANCGRFAADAFETYTQFQVTYSVLGFTKHAWVSLPKDIRVDSPPDYACPVRAA
Ga0224452_12441001	3300022534	Groundwater Sediment	VRVGYTNGGTFSFGFMLVNSGPVPLKIQRIHLTGQDELLIPVRLETATKRYAGSLGVGDPDLEKFIPFTLDGSDRRWIVVRTRFANCGRFEADAFETYTKFEVTYGVLGFTKHAWVSLPKDIGVDSPPDLACPTRAV
Ga0207690_108326102	3300025932	Corn Rhizosphere	LTAANFASGPVTSSGANVVRVGYANGGTFSFGFLVVNDGPLPVKIQAIRVTGQNDLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAV
Ga0207709_108611712	3300025935	Miscanthus Rhizosphere	LTAANFASGPVTSSGANVVRVAYANGGTFSFGFLVVNDGPLPVKIQAIRVTGQNDLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDLACPTRAV
Ga0207674_115040461	3300026116	Corn Rhizosphere	TAANFASGPVTSSGANVVRVGYANGGTFSFGFLLVNDGPLPVKIQSIRVTGQNDLLVTVGLATAAKRYAGSLAQGDPSLDKFLPFTLAGDDRRWIAVRTRFGNCGRFVAGDSQTYTRFNVTYSVLGFTKHAWVALPKDIGVDSPPDFACPSRVA
Ga0207674_115588741	3300026116	Corn Rhizosphere	TAANFASGPVTSSGANVVRVGYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLATVGLETAAKRYAGSLAQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFVAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVP
Ga0208889_10126412	3300026891	Soil	MVRVGYENGGAFSFGFLVVNDGPLPVKIQRIEVTGQSDLLVTVGLETAANRYAGSLGQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFAAGASETYTRFKVTYSVLGFTKH
Ga0209842_10398461	3300027379	Groundwater Sand	FSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTAGIETAAKRYAGSLALGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAV
Ga0209887_10038711	3300027561	Groundwater Sand	GPVPLKIQRIQLSGQKELLIPVRLETAAKRDAGSLGVGDPDLEKFVPFTLDGSDRRWIVVRTRFANCGRFEADAFETYTQFQVTYKVLGFTKHAWVSLPKDIRVDSPPDYACPARAA
Ga0209887_10160875	3300027561	Groundwater Sand	PLSAANFASGTVTESGPNMIRLEYASGGTFTFGFLLVNDGPLPLKIQRIQLTGQDELLIPVRLETAAKRDAGSLGVGDPDLEKFIPFTLDGGDRRWIVVRTRFANCGRFEADAFETYTQFQVTFGALGLTKHAWVPLPKDIRVDSPPDYACPARAD
Ga0209874_11532251	3300027577	Groundwater Sand	FLVVNDGPLPVKIQAIQVTGQSELLVTVGLQTAANRDAGSLAQGDPSLGKFLPFTLTGGDRRWIVVRTRFGNCGRFAAGALETYTRFKVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPTRAV
Ga0256865_11152231	3300027657	Soil	PLSAANFASGPVTSSGPNMVRVGYANGGTFSFGFLVVNDGSLPVKIEGIQITGQSQLLVPVRLETAAKRYAGSLGEGDPSLEKFLPFTLAGGDRRWIAVRTRFGNCGRFAAGTSETYTRFKVTYSVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA
Ga0209819_102626321	3300027722	Freshwater Sediment	VRVGYANGGTFSFGFLVVNDGSLPVKIEGIQITGQSQLLVPVRLETAAKRYAGSLGEGDPSLEKFLPFTLAGGDRRWIAVRTRFGNCGRFAAGTSETYTRFKVTYSVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA
Ga0209382_119932821	3300027909	Populus Rhizosphere	TSSGPNMVRVGYANGGTFSFGFLIVNDGQLPVKVQGIQITGQNQLLVPVRLETAAKRYAGSLSELDPSLEKFLPFTLAGDDRRWIVIRTRFGNCGRFAAGTSETYTRFKVTYTVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA
Ga0209858_10109501	3300027948	Groundwater Sand	MVRVGYANGGTFSFGFLIVNEGQLPVKIQGIQITGQSQLLVPVRLETAAKRYTGSLSEGDPSLEKFIPFTLAGGDRRWIVVRTRFGNCGRFAAGASETYTRFKVTYSVLGLTKQAWVPLPKDIGVDSPPDYACPTRAA
Ga0209860_10110953	3300027949	Groundwater Sand	GFLVVNDGPLPVKIQRIQVTGQNDLLVTAGIETAAKRYAGSLALGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIRVDSPPDYACPARAA
Ga0247820_108296871	3300028597	Soil	YQPLTAANFASGPVTSSGANVVRVGYANGRTFSFGFLVVTDGPLPVKIQRIQVTGQNDLLVTVGLETAAKRYAGSLAQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFMAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVA
Ga0307292_104232841	3300028811	Soil	TGQNDLLITVGLETAAQRYAGSLTQGDPSLDKFLPFTLAGGDRRWIAVRTHFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDVGVDSPPDFACPTRAA
Ga0247825_107474842	3300028812	Soil	GANVVRVGYANGGTFSFGFLVVNDGPLPLKIQRIQVTGQNDLLVTAGIETAAKRYAGSLALGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPRDIGVDSPPDFACATRAV
Ga0307302_100500631	3300028814	Soil	SNGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTVGLETAAQRYAGSLAQGDPSLDKFLPFTLAGGDLRWIAVRARFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDVGVDSPPDFACPTRAA
Ga0307296_101030491	3300028819	Soil	NDLLITVGLETAAQRYAGSLTQGDPSLDKFLPFTLAGGDRRWIAVRTHFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPTRAA
Ga0247826_115019811	3300030336	Soil	VNDGPLPVKIQRIQVTGQNDLLVTVGLETAAKRYAGSLAQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFMAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVA
Ga0247826_116129761	3300030336	Soil	GGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTAGIETAAKRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKAIGVDSPPDFACPTRAV
Ga0268386_102121411	3300030619	Soil	ASSGTNTVRVGYENGGTFSFGFLIVNDGQLPVKVQRIQMTGQSHLLVPVRVETAAKRYAGSLGEGDPSLEKFLPFTLAGGDRRWIVIRTRFGNCDRFAAGALETYTRFQATYSVLGLTKHALVQLPRDIWVGSPPDSACPARAT
Ga0307405_114528462	3300031731	Rhizosphere	VKIQRIQVIGQNDLLVTAGLETAPKRYAGSLGEGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCDRFAAGASQTYTRFKVTYSVLGFTKSAVVPLPKDVGVESPSDYACPARAA
Ga0307468_1008165591	3300031740	Hardwood Forest Soil	TSSGANVVRVAYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTAGIETAARRYAGSLALGDPFLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPKDIGVDSPPDFACPTRAV
Ga0310900_106292391	3300031908	Soil	NVVRVGYANGGTFSFGFLLVNDGPLPVKIQSIRVTGQNDLLVTVGLETAAKRYAGSLAQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFMAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVA
Ga0310896_103057361	3300032211	Soil	SSGANVVRVGYANGRTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTVGLETAAKRYAGSLAQGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCGRFAAGASQTYTRFNVTYSVLGFTKHAWVPLPKDIGVDSPPDFACPSRVA
Ga0214472_110878102	3300033407	Soil	NDGPLPLKIQRIRVTGRNDLLIPVRFETAAKRDAGSLGVSDPSLEKFLPFTLSGSDGRWMVVRTRFANCARFPTGDFQTFTRFQVTYSVLGFTKHVWVQLPKSIRVSSPPASACPARSA
Ga0247830_101973092	3300033551	Soil	VVRVAYANGGTFSFGFLVVNDGPLPVKIQRIQVTGQNDLLVTAGIETAAKQYAGSLALGDPSLDKFLPFTLAGGDRRWIAVRTRFGNCARFAAGASQTYTRFNVTYSVLGFTKHAWVSLPRDIGVDSPPDFACATRAV
Ga0364937_046452_418_798	3300034113	Sediment	SFGFLVVNDGSLPVKIEGIQITGQSQLLVPVRLETAAKRYAGSLSEFDPSLEKFLPFTLAGGDRRWIVVRTRFGNCGRFAEGTSETYTRFKVTYTVLGLTKHAWVPLPKDIAVDSPPDFACPTQAA
Ga0364945_0027914_1189_1506	3300034115	Sediment	TGQSQLLVPVRLETAAKRYAGSLSEFDPSLEKFLPFTLAGGDRRWIVVRTRFGNCGRFAEGTSETYTRFKVTYTVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA
Ga0364929_0224985_170_586	3300034149	Sediment	VVRVGYANGGTFSFGFLIVNDGQLPVKVQGIQITGQSQLLVPVRLETAAKRYAGSLSEFDPSLEKFLPFTLAGGDRRWIVVRTRFGNCGRFAEGTSETYTRFKVTYTVLGLTKHAWVPLPKDIAVDSPPDFACPTQAA
Ga0364931_0074321_694_1053	3300034176	Sediment	NDGQLPVKIQGIQITGQSQLLVPVRLETATKRYAGSLGEGDPSLEKFIPFTLAGDDRRWIVVRTRFGNCGRFAAGASETYTRFKVTYTVLGFTKHAWVPLPKDIGVDSPPDYACPTRAA
Ga0364931_0119976_417_833	3300034176	Sediment	VVRVAYANGGTFSFGFLIVNDGQLPVKVQGIQITGQSQLLVPVRLETAAKRYAGSLSEFDPSLEKFLPFTLAGGDRRWIVVRTRFGNCGRFAEGTSETYTRFKVTYTVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA
Ga0364941_057784_407_823	3300034417	Sediment	MVRVGYANGGTFSFGFLIVNDGQLPVKIQGIQIAGQSQLLVPVRLETATKRYAGSLGEGDPSLEKFIPFTLAGDDRRWIVVRTRFGNCGRFAAGASETYTRFKVTYTVLGFTKHAWVPLPKDIGVDSPPDYACPTRAA
Ga0364923_0049592_620_994	3300034690	Sediment	GFLIVNDGQLPVKVQGIQITGQSQLLVPVRLETAAKRYAGSLSEFDPSLEKFLPFTLAGGDRRWIVVRTRFGNCGRFAEGTSETYTRFKVTFSVLGLTKHAWVPLPKDIAVDSPPDFACPTRAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F082646

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences