Metagenome / Metatranscriptome Family F059341

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F059341
Family Type	Metagenome / Metatranscriptome
Number of Sequences	134
Average Sequence Length	47 residues
Representative Sequence	SAAQKKYPLYRLAIISLELLDRKHCEMHPSWLSFAVKLTAFFGYFLLL
Number of Associated Samples	51
Number of Associated Scaffolds	134

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.64 %
% of genes near scaffold ends (potentially truncated)	80.60 %
% of genes from short scaffolds (< 2000 bps)	82.09 %
Associated GOLD sequencing projects	34
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.851 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine (38.060 % of family members)
Environment Ontology (ENVO)	Unclassified (74.627 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.507 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.68% β-sheet: 0.00% Coil/Unstructured: 51.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 134 Family Scaffolds
PF08281	Sigma70_r4_2	2.24
PF07308	DUF1456	0.75
PF00266	Aminotran_5	0.75
PF02272	DHHA1	0.75
PF13361	UvrD_C	0.75
PF00393	6PGD	0.75
PF00119	ATP-synt_A	0.75
PF00154	RecA	0.75
PF00593	TonB_dep_Rec	0.75
PF00271	Helicase_C	0.75
PF00753	Lactamase_B	0.75
PF01510	Amidase_2	0.75
PF03193	RsgA_GTPase	0.75
PF03315	SDH_beta	0.75
PF02018	CBM_4_9	0.75
PF00326	Peptidase_S9	0.75
PF00817	IMS	0.75
PF13173	AAA_14	0.75
PF03143	GTP_EFTU_D3	0.75
PF02562	PhoH	0.75
PF08007	JmjC_2	0.75
PF03652	RuvX	0.75
PF01037	AsnC_trans_reg	0.75
PF13616	Rotamase_3	0.75
PF03795	YCII	0.75
PF00293	NUDIX	0.75
PF00581	Rhodanese	0.75
PF02954	HTH_8	0.75
PF04542	Sigma70_r2	0.75
PF00909	Ammonium_transp	0.75
PF07992	Pyr_redox_2	0.75
PF02631	RecX	0.75
PF00764	Arginosuc_synth	0.75
PF12631	MnmE_helical	0.75
PF13155	Toprim_2	0.75

COG ID	Name	Functional Category	% Frequency in 134 Family Scaffolds
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.75
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.75
COG4807	Uncharacterized conserved protein YehS, DUF1456 family	Function unknown [S]	0.75
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.75
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.75
COG2137	SOS response regulatory protein OraA/RecX, interacts with RecA	Posttranslational modification, protein turnover, chaperones [O]	0.75
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	0.75
COG1760	L-serine deaminase	Amino acid transport and metabolism [E]	0.75
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	0.75
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.75
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.75
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	0.75
COG1023	6-phosphogluconate dehydrogenase (decarboxylating)	Carbohydrate transport and metabolism [G]	0.75
COG0816	YqgF/RuvX protein, pre-16S rRNA maturation RNase/Holliday junction resolvase/anti-termination factor	Translation, ribosomal structure and biogenesis [J]	0.75
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.75
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.75
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.75
COG0362	6-phosphogluconate dehydrogenase	Carbohydrate transport and metabolism [G]	0.75
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	0.75
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	0.75

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.85 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	77.61 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	75.37 %
Unclassified	root	N/A	20.15 %

Name	Rank	Taxonomy	Distribution
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	61.94 %
Unclassified	root	N/A	20.15 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	1.49 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.75 %

Name	Rank	Taxonomy	Distribution
unclassified Cellvibrionales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales	58.21 %
Unclassified	root	N/A	20.15 %
Cellvibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae	0.75 %
Colwelliaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae	0.75 %
unclassified Pseudomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales	0.75 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.75 %

Name	Rank	Taxonomy	Distribution
Cellvibrionales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	58.21 %
Unclassified	root	N/A	20.15 %
Pseudomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	0.75 %
Simiduia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Simiduia	0.75 %
Agarivorans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Agarivorans	0.75 %
Colwellia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia	0.75 %

Name	Rank	Taxonomy	Distribution
Cellvibrionales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	58.21 %
Unclassified	root	N/A	20.15 %
Simiduia agarivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Simiduia → Simiduia agarivorans	0.75 %
unclassified Colwellia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → unclassified Colwellia	0.75 %
Agarivorans albus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Agarivorans → Agarivorans albus	0.75 %
Pseudomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	0.75 %

Name	Rank	Taxonomy	Distribution
Cellvibrionales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	58.21 %
Unclassified	root	N/A	20.15 %
Colwellia sp. C2M11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → unclassified Colwellia → Colwellia sp. C2M11	0.75 %
Simiduia agarivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Simiduia → Simiduia agarivorans	0.75 %
Agarivorans albus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Agarivorans → Agarivorans albus	0.75 %
Pseudomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	0.75 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001348\|JGI20154J14316_10146437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	647	Open in IMG/M
3300001349\|JGI20160J14292_10212888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	553	Open in IMG/M
3300001351\|JGI20153J14318_10062285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1250	Open in IMG/M
3300001351\|JGI20153J14318_10101013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	799	Open in IMG/M
3300001351\|JGI20153J14318_10115918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	706	Open in IMG/M
3300001351\|JGI20153J14318_10150706	Not Available	564	Open in IMG/M
3300003580\|JGI26260J51721_1066795	Not Available	532	Open in IMG/M
3300004279\|Ga0066605_10325414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	561	Open in IMG/M
3300006165\|Ga0075443_10008983	Not Available	3489	Open in IMG/M
3300007637\|Ga0102906_1161464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	609	Open in IMG/M
3300008052\|Ga0102893_1201708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	575	Open in IMG/M
3300008651\|Ga0103623_1004066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	874	Open in IMG/M
3300009074\|Ga0115549_1196656	Not Available	644	Open in IMG/M
3300009076\|Ga0115550_1273226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	548	Open in IMG/M
3300009080\|Ga0102815_10516857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	668	Open in IMG/M
3300009423\|Ga0115548_1083943	Not Available	1062	Open in IMG/M
3300009432\|Ga0115005_10014815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6049	Open in IMG/M
3300009432\|Ga0115005_10392004	Not Available	1100	Open in IMG/M
3300009432\|Ga0115005_11198837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	618	Open in IMG/M
3300009432\|Ga0115005_11212077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	614	Open in IMG/M
3300009432\|Ga0115005_11551999	Not Available	543	Open in IMG/M
3300009434\|Ga0115562_1006591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	7132	Open in IMG/M
3300009436\|Ga0115008_10064978	All Organisms → cellular organisms → Bacteria → Proteobacteria	2780	Open in IMG/M
3300009436\|Ga0115008_10703408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	734	Open in IMG/M
3300009436\|Ga0115008_10831774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	678	Open in IMG/M
3300009436\|Ga0115008_10890551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	657	Open in IMG/M
3300009436\|Ga0115008_11133064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	590	Open in IMG/M
3300009436\|Ga0115008_11630921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	501	Open in IMG/M
3300009438\|Ga0115559_1087927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	1236	Open in IMG/M
3300009438\|Ga0115559_1126301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	971	Open in IMG/M
3300009438\|Ga0115559_1126478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Colwelliaceae → Colwellia → unclassified Colwellia → Colwellia sp. C2M11	970	Open in IMG/M
3300009438\|Ga0115559_1196683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	730	Open in IMG/M
3300009438\|Ga0115559_1342475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	521	Open in IMG/M
3300009440\|Ga0115561_1048978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	1894	Open in IMG/M
3300009440\|Ga0115561_1077866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	1406	Open in IMG/M
3300009440\|Ga0115561_1301557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	592	Open in IMG/M
3300009440\|Ga0115561_1354218	Not Available	539	Open in IMG/M
3300009441\|Ga0115007_10007156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6669	Open in IMG/M
3300009441\|Ga0115007_10014561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4733	Open in IMG/M
3300009441\|Ga0115007_10592011	Not Available	738	Open in IMG/M
3300009441\|Ga0115007_10856187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	618	Open in IMG/M
3300009441\|Ga0115007_10996808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	575	Open in IMG/M
3300009441\|Ga0115007_11038587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	565	Open in IMG/M
3300009442\|Ga0115563_1138627	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300009447\|Ga0115560_1118435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	1072	Open in IMG/M
3300009447\|Ga0115560_1387613	Not Available	529	Open in IMG/M
3300009467\|Ga0115565_10494451	Not Available	549	Open in IMG/M
3300009497\|Ga0115569_10262571	Not Available	772	Open in IMG/M
3300009497\|Ga0115569_10514302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	504	Open in IMG/M
3300009498\|Ga0115568_10397848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	597	Open in IMG/M
3300009498\|Ga0115568_10400997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	594	Open in IMG/M
3300009498\|Ga0115568_10487646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	526	Open in IMG/M
3300009507\|Ga0115572_10311964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	890	Open in IMG/M
3300009544\|Ga0115006_10308306	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300009544\|Ga0115006_11492895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	611	Open in IMG/M
3300009544\|Ga0115006_11544494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	601	Open in IMG/M
3300013010\|Ga0129327_10004848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	7635	Open in IMG/M
3300013010\|Ga0129327_10011423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	4857	Open in IMG/M
3300013010\|Ga0129327_10018351	All Organisms → cellular organisms → Bacteria → Proteobacteria	3716	Open in IMG/M
3300013010\|Ga0129327_10447302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	692	Open in IMG/M
3300013010\|Ga0129327_10573826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	619	Open in IMG/M
3300013010\|Ga0129327_10836051	Not Available	525	Open in IMG/M
3300013010\|Ga0129327_10844574	Not Available	522	Open in IMG/M
3300013010\|Ga0129327_10869492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	516	Open in IMG/M
3300017697\|Ga0180120_10393095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	545	Open in IMG/M
3300020169\|Ga0206127_1059091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae → Agarivorans → Agarivorans albus	1865	Open in IMG/M
3300020169\|Ga0206127_1119991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1068	Open in IMG/M
3300020595\|Ga0206126_10004001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	14527	Open in IMG/M
3300020595\|Ga0206126_10012745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Simiduia → Simiduia agarivorans	6327	Open in IMG/M
3300020595\|Ga0206126_10103029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1408	Open in IMG/M
3300020595\|Ga0206126_10250894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	809	Open in IMG/M
3300020595\|Ga0206126_10257137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	797	Open in IMG/M
3300020595\|Ga0206126_10313376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	705	Open in IMG/M
3300020595\|Ga0206126_10460074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	552	Open in IMG/M
3300020595\|Ga0206126_10461269	Not Available	551	Open in IMG/M
3300020595\|Ga0206126_10477068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	539	Open in IMG/M
3300025483\|Ga0209557_1085790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	682	Open in IMG/M
3300025483\|Ga0209557_1097463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	612	Open in IMG/M
3300025483\|Ga0209557_1098171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	608	Open in IMG/M
3300025590\|Ga0209195_1044633	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300025594\|Ga0209094_1000348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	34869	Open in IMG/M
3300025594\|Ga0209094_1128083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	553	Open in IMG/M
3300025620\|Ga0209405_1099652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	837	Open in IMG/M
3300025620\|Ga0209405_1102594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	818	Open in IMG/M
3300025620\|Ga0209405_1121740	Not Available	712	Open in IMG/M
3300025620\|Ga0209405_1123517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → unclassified Pseudomonadales → Pseudomonadales bacterium	704	Open in IMG/M
3300025620\|Ga0209405_1156984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	580	Open in IMG/M
3300025640\|Ga0209198_1011323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4583	Open in IMG/M
3300025640\|Ga0209198_1028028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	2404	Open in IMG/M
3300025640\|Ga0209198_1029984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2288	Open in IMG/M
3300025640\|Ga0209198_1141717	Not Available	679	Open in IMG/M
3300025640\|Ga0209198_1160140	Not Available	615	Open in IMG/M
3300025640\|Ga0209198_1164503	Not Available	601	Open in IMG/M
3300025641\|Ga0209833_1025499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2283	Open in IMG/M
3300025641\|Ga0209833_1185005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	519	Open in IMG/M
3300025654\|Ga0209196_1001989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13540	Open in IMG/M
3300025654\|Ga0209196_1126511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	728	Open in IMG/M
3300025654\|Ga0209196_1131198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	709	Open in IMG/M
3300025654\|Ga0209196_1183807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	553	Open in IMG/M
3300025654\|Ga0209196_1184259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	552	Open in IMG/M
3300025658\|Ga0209659_1170051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	637	Open in IMG/M
3300025694\|Ga0209406_1006652	All Organisms → cellular organisms → Bacteria	6437	Open in IMG/M
3300025694\|Ga0209406_1007999	Not Available	5700	Open in IMG/M
3300025694\|Ga0209406_1182504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	642	Open in IMG/M
3300025699\|Ga0209715_1021635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3273	Open in IMG/M
3300025699\|Ga0209715_1215055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	591	Open in IMG/M
3300025699\|Ga0209715_1258996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	507	Open in IMG/M
3300025860\|Ga0209119_1047814	Not Available	2162	Open in IMG/M
3300025860\|Ga0209119_1073478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1606	Open in IMG/M
3300025860\|Ga0209119_1092996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	1357	Open in IMG/M
3300025860\|Ga0209119_1188985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	810	Open in IMG/M
3300025860\|Ga0209119_1213987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	738	Open in IMG/M
3300025860\|Ga0209119_1218165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	727	Open in IMG/M
3300025860\|Ga0209119_1239283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	678	Open in IMG/M
3300025860\|Ga0209119_1253893	Not Available	648	Open in IMG/M
3300025860\|Ga0209119_1295203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	577	Open in IMG/M
3300025860\|Ga0209119_1323266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	538	Open in IMG/M
3300025874\|Ga0209533_1329263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	577	Open in IMG/M
3300027582\|Ga0208971_1065857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	930	Open in IMG/M
3300027757\|Ga0208671_10270876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	602	Open in IMG/M
3300027771\|Ga0209279_10179207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	626	Open in IMG/M
3300027810\|Ga0209302_10189586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	989	Open in IMG/M
3300027833\|Ga0209092_10039214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2995	Open in IMG/M
3300027833\|Ga0209092_10284415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	900	Open in IMG/M
3300027833\|Ga0209092_10597492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	552	Open in IMG/M
3300027833\|Ga0209092_10621893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	538	Open in IMG/M
3300027833\|Ga0209092_10682048	Not Available	506	Open in IMG/M
3300027849\|Ga0209712_10544132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	648	Open in IMG/M
3300027849\|Ga0209712_10768493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	527	Open in IMG/M
3300027883\|Ga0209713_10950014	Not Available	536	Open in IMG/M
3300031594\|Ga0302131_1256178	Not Available	558	Open in IMG/M
3300031594\|Ga0302131_1257634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → unclassified Cellvibrionales → Cellvibrionales bacterium	556	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.25%
Unclassified	Environmental → Aquatic → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Pelagic	Environmental → Aquatic → Marine → Pelagic	46.27%
Oceanic	Environmental → Aquatic → Marine → Oceanic	23.88%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	12.69%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.46%
Coastal	Environmental → Aquatic → Marine → Coastal	6.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	46.27%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	23.88%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	12.69%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.72%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	4.48%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	2.99%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	2.24%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.75%

Habitat	Taxonomy	Distribution
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	38.06%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	23.88%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	12.69%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	8.21%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	6.72%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	4.48%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	2.99%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.24%
North Sea	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → North Sea	0.75%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001348	Pelagic Microbial community sample from North Sea - COGITO 998_met_04	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300001351	Pelagic Microbial community sample from North Sea - COGITO 998_met_03	Environmental	Open in IMG/M
3300003580	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA	Environmental	Open in IMG/M
3300004279	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_10m	Environmental	Open in IMG/M
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300007637	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02	Environmental	Open in IMG/M
3300008052	Estuarine microbial communities from the Columbia River estuary - metaG 1553A-02	Environmental	Open in IMG/M
3300008651	Microbial communities of saline water collected from the North Sea in Germany - HE327_13	Environmental	Open in IMG/M
3300009074	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430	Environmental	Open in IMG/M
3300009076	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100511	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009432	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome	Environmental	Open in IMG/M
3300009434	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009438	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506	Environmental	Open in IMG/M
3300009440	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512	Environmental	Open in IMG/M
3300009441	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome	Environmental	Open in IMG/M
3300009442	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009467	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110530	Environmental	Open in IMG/M
3300009497	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300017697	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)	Environmental	Open in IMG/M
3300020169	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160419_1	Environmental	Open in IMG/M
3300020595	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1	Environmental	Open in IMG/M
3300025483	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025590	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420 (SPAdes)	Environmental	Open in IMG/M
3300025594	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430 (SPAdes)	Environmental	Open in IMG/M
3300025620	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110516 (SPAdes)	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300025640	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110519 (SPAdes)	Environmental	Open in IMG/M
3300025641	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110506 (SPAdes)	Environmental	Open in IMG/M
3300025654	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)	Environmental	Open in IMG/M
3300025658	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_10m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025694	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426 (SPAdes)	Environmental	Open in IMG/M
3300025699	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120503 (SPAdes)	Environmental	Open in IMG/M
3300025860	Pelagic Microbial community sample from North Sea - COGITO 998_met_03 (SPAdes)	Environmental	Open in IMG/M
3300025874	Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)	Environmental	Open in IMG/M
3300027582	Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_18_M0_10 (SPAdes)	Environmental	Open in IMG/M
3300027757	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759 (SPAdes)	Environmental	Open in IMG/M
3300027771	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)	Environmental	Open in IMG/M
3300027810	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027833	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027849	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300027883	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome (SPAdes)	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20154J14316_101464371	3300001348	Pelagic Marine	MQVPHKKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFF
JGI20160J14292_102128882	3300001349	Pelagic Marine	LAVKPDPSAAQKKYPLYRLAINPLKLLDRKPYEMHPSCSSFAVKVAAFFGYFLLL*
JGI20153J14318_100622851	3300001351	Pelagic Marine	MLDISAAQKKYPLYRLAIISLELLDRKHYEMHPSWLSFAVK
JGI20153J14318_101010132	3300001351	Pelagic Marine	LDVKFDASAAQKKYPLYRLAIIPLELLYRKHYEMHPSWLSFAVKLTAFFGYFLLL*
JGI20153J14318_101159181	3300001351	Pelagic Marine	LAVKPDPSAAQKKYPLYRLAINPLKLLDRKPYEMHPSCSSFAVKVAAFFGYFLLL
JGI20153J14318_101507061	3300001351	Pelagic Marine	LNVKLDTSAAQKSTPLYRLAIISLKLLDRKPYEMHPSWLSFAVKLTAFL
JGI26260J51721_10667952	3300003580	Marine	MKVQHKKKYPLYRLAINSLKLLDRKLCEMHPSWLSFAVKLTAFFGYFLLL*
Ga0066605_103254141	3300004279	Marine	LNAKPDASAAQKKYPLYRLAINSLKLLDRKPYEMHPSWLSFAVKLTAFLVTFFAVE
Ga0075443_100089834	3300006165	Marine	MNVNVNVSAAQKKYPLYRLAIISLKLLDRKHYEMHPSWLSFAVKL
Ga0102906_11614641	3300007637	Estuarine	LDVKPNTSAAQKKYPLYRLAINPLELLDRKHCEMHPSWLSFAVKLTAFF
Ga0102893_12017081	3300008052	Estuarine	LGAKPDASAAQKKYPLYRLAIISLELLDRKHCEMHPSWLS
Ga0103623_10040662	3300008651	North Sea	MLDVSAAQKKYPLYRLAIISLELLDRKHCEMHPSWLSFAVKLTAFLVTF
Ga0115549_11966561	3300009074	Pelagic Marine	LYRLAIISLELLDRKHYEMHPSCSSFVVKVAAFFGDFFLL*
Ga0115550_12732261	3300009076	Pelagic Marine	LDVKLEASAAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFG
Ga0102815_105168571	3300009080	Estuarine	VEHRKKYPLYRLAIISLELLDRKPCEMHPSWSSFAVKVAAFFGD
Ga0115548_10839432	3300009423	Pelagic Marine	DVSAAQKTYPLYRLAIISLELLDRKPYEMHPSCSSFAVKVAAFFGDFLLL*
Ga0115005_100148151	3300009432	Marine	NLKKHPLYRLAINPLELLDRKPYEMHPSCSSFVVKVAAFFGDFFLL*
Ga0115005_103920041	3300009432	Marine	KKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGYFLLL*
Ga0115005_111988371	3300009432	Marine	LDVKFDISAAQKKYPLYRLAITSLKLLDRKHYEMHPSCSSFAVKVAAF
Ga0115005_112120771	3300009432	Marine	LVIKPEASAAQKKYPLYRLAIISLELLERQHCEMHPSCSSFVVR
Ga0115005_115519991	3300009432	Marine	AAQKKYPLYRLAITSLELLDRKPYEMHPSCSRFAVKVAAFFGYFLLL*
Ga0115562_10065915	3300009434	Pelagic Marine	MLDISAAQKKYPLYRLAIISLELLDRKHYEMHPSWLSFAVKLTA
Ga0115008_100649784	3300009436	Marine	ISLELLDRKPYEMHPSWSSFAVKVAAFFGDFLLL*
Ga0115008_107034081	3300009436	Marine	MLDVSAAQKKYPLYRLAISPLELLDRKPYEMHPSWLSFAVKLTAIFGYFLLL*
Ga0115008_108317741	3300009436	Marine	LAVKPDPSAAQKKYPLYRLAINPLKLLDRKPYEMHPSCSSFAVKVAAFFGYF
Ga0115008_108905511	3300009436	Marine	MQVPHKKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGYFLLL
Ga0115008_111330642	3300009436	Marine	LDVKLDAGAAQKKYLLYRLAISPLKLLERKPFEMHLSCSSFAVKVAAFFGDFLLL*
Ga0115008_116309212	3300009436	Marine	MCSTKKYPLYRLAIISLELLDKKPYEMHPSWLSFAVKLTAFFGYFFLLLKK
Ga0115559_10879273	3300009438	Pelagic Marine	YRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGYFLLLLTA*
Ga0115559_11263011	3300009438	Pelagic Marine	LNVKLDVSAAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVK
Ga0115559_11264782	3300009438	Pelagic Marine	NPLELLEKQHCEMHPSWSSFAVKVAAFFGDFFLL*
Ga0115559_11966831	3300009438	Pelagic Marine	VQHKKYPLYRLAISPLELLDRKHYEMHPSWSSFAVKVAAFLV
Ga0115559_13424751	3300009438	Pelagic Marine	LDEKLEASAAQKKYPLYRLAIISLELLDKKPYEMHPS
Ga0115561_10489781	3300009440	Pelagic Marine	VQHKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFG
Ga0115561_10778662	3300009440	Pelagic Marine	LAIISLELLDRKHCEMHPSWLSFAVKLTAVFGYFLLL*
Ga0115561_13015572	3300009440	Pelagic Marine	LDVKPDTNAAQKKYPLYRLAIISLELLDRKHCEMHPSWSSFAVKVAAFF
Ga0115561_13542181	3300009440	Pelagic Marine	LYRLAITPLKLLDRKPYEMHPSCSSFAVKVAAFLGYFLLL*
Ga0115007_100071567	3300009441	Marine	LAINPLELLDRKPYEMHPSCSSFAVKVAAFFGYFLLL*
Ga0115007_100145611	3300009441	Marine	QVQHKKYPLYRLAIISLELLDRKHYEMHPSWSSFAVKVAAFFGDFLLL*
Ga0115007_105920112	3300009441	Marine	SAAQKKYSLYRLAIIFLELLERQYCEMHPSRSSFAVKVAAFFGYFLLL*
Ga0115007_108561872	3300009441	Marine	LDVKFDISAAQKKYPLYRLAIISLKLLDRKHYEMHPSCSSF
Ga0115007_109968081	3300009441	Marine	LDVKYDASATQKKYPLYRLAIISLKLLDRKLYEMHPSCSSFVVRLR
Ga0115007_110385872	3300009441	Marine	DLKPDASAVQKKYPLYRLAINPLELLERQHCEMHPSWLSFAVKLTAFLVTFFAADTA*
Ga0115563_11386272	3300009442	Pelagic Marine	LGIKPDTSAAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGDFFLL*
Ga0115560_11184351	3300009447	Pelagic Marine	LAIISLELLDRKHYEMHPSWLSFAVKLTAFFGYFLLLLTKSDWLSG
Ga0115560_13876131	3300009447	Pelagic Marine	AQKKYPLYRLAIISLELLDRKHYEMHPSCSSFVVKVAAFFGDFFLL*
Ga0115565_104944511	3300009467	Pelagic Marine	YRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGDFFLL*
Ga0115569_102625711	3300009497	Pelagic Marine	LAIISLELLDRKHCEMHPSWLSFAVKLTAFFGYFLLL*
Ga0115569_105143021	3300009497	Pelagic Marine	LVIKPEASAAQKKYSLYRLAISPLELLDRKHCEMHPSWLSFAVKLTAF
Ga0115568_103978481	3300009498	Pelagic Marine	KVPPLYRLAIISLELLDRKHYEMHPSCSSFAVKVAAFFGYFLLL*
Ga0115568_104009971	3300009498	Pelagic Marine	LDVKHGASAAPKKYPLYRLAIISLELLDRKHCEMHPSWLSFAVKLTAFLVT
Ga0115568_104876462	3300009498	Pelagic Marine	LDVKLEASAAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAV
Ga0115572_103119642	3300009507	Pelagic Marine	LDVKLEASAAPKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLT
Ga0115006_103083061	3300009544	Marine	KTYPLYRLAIISLELLDRKHYEMHPSCSSFAVKVAAFFG*
Ga0115006_114928952	3300009544	Marine	MQVQRKKKYPLYRLAITSLELLDRKHCEMHPSCSSFVVKVAAFFG
Ga0115006_115444941	3300009544	Marine	AQKKYPLYRLAIISLELLDRKHCEMHPSWLSFAIKLTAFFGYFLLL*
Ga0129327_100048481	3300013010	Freshwater To Marine Saline Gradient	RLAITSLELLDRKPYEMHPSWSSFAVKVAAFFGDFFLLLTA*
Ga0129327_100114232	3300013010	Freshwater To Marine Saline Gradient	LAVKPDASAAQKKYPLYRLAISSLELLDRKHYEMHPSCSSFAVKVAAFFGDFLLL*
Ga0129327_100183514	3300013010	Freshwater To Marine Saline Gradient	STKKYPLYRLAIIPLELLDRKHYEMHPSWSSFAVKVAAFFGDFFLL*
Ga0129327_104473022	3300013010	Freshwater To Marine Saline Gradient	LDVKPDASAAQKKYPLCRLAISPLELLDRKHCEMHPSWSSFAVKVAAFFGDFLLLLT
Ga0129327_105738261	3300013010	Freshwater To Marine Saline Gradient	LDVKFDASAAQKKYSLYRLAINPLELLDRKHCEMHPSWLSFAVKLTAFL
Ga0129327_108360511	3300013010	Freshwater To Marine Saline Gradient	KYPLYRLAIISLELLDRKHCEMHPSWSSFAVKVAAFFGYFLLL*
Ga0129327_108445742	3300013010	Freshwater To Marine Saline Gradient	MLDASAAQKKYPLYRLAIISLKLLDRKPCEMHPSWLSFAVKLTAFFGYFLLL*
Ga0129327_108694921	3300013010	Freshwater To Marine Saline Gradient	LDVKSDVSAAQKKYPLYRLAINPLELLDRKPYEMHPSCSSFAVKVAAFLVT
Ga0180120_103930951	3300017697	Freshwater To Marine Saline Gradient	MLDVSAAQKKYPLYRLAISPLELLDRKHCEMHPSWLSFAVKLTAFFGYFLLL
Ga0206127_10590913	3300020169	Seawater	LDEKLEASAAQKKYPLYRLAIISLELLDKKPYEMHPSCSSFAVKVAAFFGYFLLL
Ga0206127_11199912	3300020169	Seawater	MLDVSAAQKKYPLYRLAIISLELLDRKHCEMHPSWLSFAVKLTAFFGYFLLL
Ga0206126_1000400115	3300020595	Seawater	MLDVSAAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLT
Ga0206126_100127451	3300020595	Seawater	YPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGDFFLL
Ga0206126_101030291	3300020595	Seawater	RKVNVSEAQKKYPLYRLAITPLKLLERQPYEMHPSCSSFVVKVAAFFGYFLLL
Ga0206126_102508941	3300020595	Seawater	LDIKLDTSAAPKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGDFFLL
Ga0206126_102571372	3300020595	Seawater	MLDASAAQKKYPLYRLAIISLKLLDRKPCEMHPSWLSFAVKLTAFFGYFLLL
Ga0206126_103133762	3300020595	Seawater	MLDVSTEQKTYPLYRLAIISLELLDRKHCEMHPSCSSFVVRLRHFLV
Ga0206126_104600741	3300020595	Seawater	MQVQHRKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAF
Ga0206126_104612691	3300020595	Seawater	RLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGYFLLL
Ga0206126_104770681	3300020595	Seawater	MLDVSAAQKKYPLYRLAIISLELLDRKHCEMHPSWLSFAVKLTAFF
Ga0209557_10857901	3300025483	Marine	LDVKLDIDAAQKKYPLYRLAIISLKLLDRKHYEMHPSWSSFAVKVAAFFGDFFL
Ga0209557_10974631	3300025483	Marine	MLDVSAAQKKYPLYRLAIISLKLLDRKHCEMHPSWLSFAVKLTAFL
Ga0209557_10981711	3300025483	Marine	LGVKADPSAAQKKYPLYRLAIISLKLLDRKHYEMHPSWLSFAVKLTAF
Ga0209195_10446332	3300025590	Pelagic Marine	LDVKLEASAAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVK
Ga0209094_100034837	3300025594	Pelagic Marine	LDEKLEASAAQKKYPLYRLAISPLELLDRKHCEMHPSWLSFAVKLTAFFGYFLLL
Ga0209094_11280832	3300025594	Pelagic Marine	YFKKVPPLYRLAIISLELLDRKHYEMHPSCSSFAVKVAAFFGYFLLL
Ga0209405_10996521	3300025620	Pelagic Marine	MLDVSAAQKTYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGYFFLLLKKSY
Ga0209405_11025942	3300025620	Pelagic Marine	MLDVSAAQKKYPLYRLAISPLELLDRKPYEMHPSWLSFAVKLTAFFGYFLLL
Ga0209405_11217401	3300025620	Pelagic Marine	LKFKKVPPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGDFFCCSTA
Ga0209405_11235172	3300025620	Pelagic Marine	SAAQKKYPLYRLAIISLELLDRKHCEMHPSWLSFAVKLTAFFGYFLLL
Ga0209405_11569841	3300025620	Pelagic Marine	LNVKLDVSAAQKKYPLYRLAIISLELLDRKHCEMHPSWLSFAVKLTAFF
Ga0209197_10458701	3300025637	Pelagic Marine	LDVKHGASAAPKKYPLYRLAIISLELLDRKYYEMHPSWLSFAVKLTAFLVTFFAVVNS
Ga0209198_10113231	3300025640	Pelagic Marine	MLDISAAQKKYPLYRLAIISLELLDRKHYEMHPSWLSFAVKLT
Ga0209198_10280281	3300025640	Pelagic Marine	MLDVSAAQKKYPLYRLAISPLELLDRKHYEMHPSCSSFAVKVAAFFGDFFLL
Ga0209198_10299844	3300025640	Pelagic Marine	LDEKLEASAAQKKYPLYRLAIISLELLDKKPYEMHPSWLSFAVKLTAFFGYFLLL
Ga0209198_11417171	3300025640	Pelagic Marine	LGIKPDTSAAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGDFFLL
Ga0209198_11601401	3300025640	Pelagic Marine	LELLDRKPYEMHPSWLSFAVKLTAFFGYFLLLLTA
Ga0209198_11645031	3300025640	Pelagic Marine	KKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGYFLLL
Ga0209833_10254991	3300025641	Pelagic Marine	SLYRLAISPLELLDRKHCEMHPSWLSFAVKLTAFFGDFFLL
Ga0209833_11850052	3300025641	Pelagic Marine	LNVKLDVSAAQKKYPLYRLAIISLKLLDRKPYEMHPSWLSFAVK
Ga0209196_100198911	3300025654	Pelagic Marine	LDEKLEASAAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGYFLLL
Ga0209196_11265111	3300025654	Pelagic Marine	LNVKLDVSAAQKKYPLYRLAIISLKLLDRKPYEMHPSWLSFAVKLTAFFG
Ga0209196_11311981	3300025654	Pelagic Marine	VQHRKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFG
Ga0209196_11838072	3300025654	Pelagic Marine	LNVKLDVSAAQKKYPLYRLAIISLELLDRKHCEMHPSWLSFAVKLTAF
Ga0209196_11842592	3300025654	Pelagic Marine	LNVKLDVSAAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAV
Ga0209659_11700512	3300025658	Marine	LDAKPDASAAQKKYPLYRLAINSLKLLDRKPYEMHPSWLSFAVKLTAFLVTFFE
Ga0209406_10066524	3300025694	Pelagic Marine	MLDASAAPKKYPLYRLAINPLELLEREHCEMHPSWLSFAVKLTAFFGYFLLL
Ga0209406_10079995	3300025694	Pelagic Marine	YPLHRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGDFFLL
Ga0209406_11825041	3300025694	Pelagic Marine	LDVKLEASAAQKKYPLYRLAIISLELLDRKPYEMHPS
Ga0209715_10216351	3300025699	Pelagic Marine	MLDISAAQKKYPLYRLAIISLELLDRKHYEMHPSWLSFAVKLTAF
Ga0209715_12150552	3300025699	Pelagic Marine	LDIKLDTSAAPKKYPLYRLAIISLELLDRKPYEMH
Ga0209715_12589962	3300025699	Pelagic Marine	LDVKPDSSAAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGYFL
Ga0209119_10478141	3300025860	Pelagic Marine	AAQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGDFFLL
Ga0209119_10734781	3300025860	Pelagic Marine	SKEKLDVKYDASAAQKKYPLYRLAIISLELLDSKHYEMHPSWSSFAVKVAAFFGDFLLL
Ga0209119_10929962	3300025860	Pelagic Marine	MLDASAAPKKYPLYRLAINPLELLEREHCEMHPSWLSFAVKLTAFFGDFFLL
Ga0209119_11889851	3300025860	Pelagic Marine	MLDASATQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGYFLLL
Ga0209119_12139872	3300025860	Pelagic Marine	LDIKLDTSAAPKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGDFF
Ga0209119_12181651	3300025860	Pelagic Marine	LNVKLDVSAAPKKYPLYRLAITPLKLLDRKPYEMHPSWLSFAVKLTAFLVTFFTVAQ
Ga0209119_12392831	3300025860	Pelagic Marine	LNVKLNTSAAQKKYPLYRLAIISLKLLDRKHCEMHPSWLSFAVKLTAFLVTFFAV
Ga0209119_12538932	3300025860	Pelagic Marine	YPLYRLAIIPLKLLDRKPYEMHPSWLSFAVKLTAFFGYFLLL
Ga0209119_12952032	3300025860	Pelagic Marine	MQVQHRKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFLVTFFAVE
Ga0209119_13232661	3300025860	Pelagic Marine	LDVKLDASAAQKKYPLYRLAIISLKLLDRKPYEMHPSWLSFAVK
Ga0209533_13292633	3300025874	Pelagic Marine	LDIKLDTSAAPKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVK
Ga0208971_10658572	3300027582	Marine	LGIKLDASAAQKKYPLYRLAINSLELLDRKPYEMHPSWLSFAVKLTAFFGYF
Ga0208671_102708761	3300027757	Estuarine	MQVQHKKYPLYRLAINPLKLLDRKHYEMHPSWLSFAVKLTAFLVTFF
Ga0209279_101792073	3300027771	Marine	LDVKFDISAVQKKYPLYRLAIISLELLDRKHCEMHPSC
Ga0209302_101895861	3300027810	Marine	LYRLAISPLKLLDRKPYEMHPSCSSFAVKVAAFFGYFLLL
Ga0209092_100392141	3300027833	Marine	KKYPIYRLAIISLELLDRKPCEMHPSWSSFAVKVAAFFGDFLLL
Ga0209092_102844151	3300027833	Marine	LDIKLDTSAAPKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLT
Ga0209092_105974921	3300027833	Marine	MLDVSAAQKKYPLYRLAISPLELLDRKPYEMHPSWLSFAVKLTAIFGYFLLL
Ga0209092_106218931	3300027833	Marine	MLDASATQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFG
Ga0209092_106820481	3300027833	Marine	LDVKLDAGAAQKKYLLYRLAISPLKLLERKPFEMHLSCSSFAVKVAAFFGDFLLL
Ga0209712_104871931	3300027849	Marine	MLDVSAAQKTYPLYSLAIISLELLDRKPYEMHPSWSSFAVKVAAFFGDFFLLQHSVVCAAPE
Ga0209712_105441321	3300027849	Marine	LDVKFDASAAQKKYPLYRLAIISLKLLDRKHCEMHPSCSSFVVR
Ga0209712_107684931	3300027849	Marine	LDVKFDTSAAQKKYPLYRLAIIPLELLDRKPYEMHPSWLIFAVSLRH
Ga0209713_109500141	3300027883	Marine	AQKKYPLYRLAIISLELLDRKPYEMHPSWLSFAVKLTAFFGYFLLL
Ga0302131_12561781	3300031594	Marine	AEQKTYPIYRLAIISLELLDRKPYEMHPSCSSFAVKVAAFFGYFLLL
Ga0302131_12576341	3300031594	Marine	MVNLDVKPDVSAAQKKYSLYRLAIIFLELLELLERQYCEMHPSRSSFAVKVAAFFGYFLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F059341

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences