3300002139: M3t2BS2 (117f)

Overview

Basic Information

• IMG/M Taxon OID: 3300002139
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0110182 | Gp0072422 | Ga0016775
• Sample Name: M3t2BS2 (117f)
• Sequencing Status: Permanent Draft
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 216552021
• Sequencing Scaffolds: 38
• Novel Protein Genes: 44
• Associated Families: 43

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae	1
Not Available	14
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	2
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6
All Organisms → cellular organisms → Bacteria	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1
All Organisms → Viruses → Predicted Viral	3
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA044-N04	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Marine → Marine Microbial Communities From The Baltic Sea, Analyzing Arctic Terrigenous Carbon Compounds

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine biome → marine water body → sea water
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Baltic Sea
• Coordinates
  • Lat. (^o): 65.3915
  • Long. (^o): 23.49916667
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001008	Metagenome / Metatranscriptome	807	Y
F001009	Metagenome / Metatranscriptome	807	Y
F001143	Metagenome / Metatranscriptome	766	Y
F003329	Metagenome / Metatranscriptome	493	Y
F008752	Metagenome / Metatranscriptome	328	Y
F009605	Metagenome / Metatranscriptome	315	Y
F009748	Metagenome / Metatranscriptome	313	Y
F009749	Metagenome / Metatranscriptome	313	Y
F010227	Metagenome / Metatranscriptome	306	Y
F012962	Metagenome / Metatranscriptome	275	Y
F013762	Metagenome / Metatranscriptome	268	Y
F016833	Metagenome	244	N
F020009	Metagenome / Metatranscriptome	226	Y
F020034	Metagenome	226	Y
F023835	Metagenome / Metatranscriptome	208	N
F026746	Metagenome / Metatranscriptome	197	Y
F028789	Metagenome / Metatranscriptome	190	Y
F033701	Metagenome / Metatranscriptome	176	N
F035300	Metagenome	172	Y
F038542	Metagenome / Metatranscriptome	165	N
F039599	Metagenome / Metatranscriptome	163	Y
F042867	Metagenome / Metatranscriptome	157	Y
F043971	Metagenome / Metatranscriptome	155	Y
F047562	Metagenome / Metatranscriptome	149	N
F050579	Metagenome / Metatranscriptome	145	Y
F058138	Metagenome	135	Y
F063653	Metagenome / Metatranscriptome	129	N
F064405	Metagenome / Metatranscriptome	128	N
F072383	Metagenome / Metatranscriptome	121	Y
F080674	Metagenome / Metatranscriptome	115	Y
F080982	Metagenome / Metatranscriptome	114	Y
F082170	Metagenome / Metatranscriptome	113	N
F086548	Metagenome / Metatranscriptome	110	N
F091973	Metagenome / Metatranscriptome	107	Y
F093284	Metagenome / Metatranscriptome	106	N
F095049	Metagenome	105	Y
F095514	Metagenome / Metatranscriptome	105	N
F097356	Metagenome / Metatranscriptome	104	N
F100425	Metagenome / Metatranscriptome	102	Y
F102527	Metagenome	101	Y
F103261	Metagenome / Metatranscriptome	101	Y
F104489	Metagenome / Metatranscriptome	100	N
F104703	Metagenome / Metatranscriptome	100	N

Associated Scaffolds

Scaffold	Taxonomy	Length
M3t2BS2_1081820	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae	835
M3t2BS2_1161840	Not Available	512
M3t2BS2_1217923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	3048
M3t2BS2_1250164	Not Available	779
M3t2BS2_1258668	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1753
M3t2BS2_1270976	All Organisms → cellular organisms → Bacteria	990
M3t2BS2_1314960	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	685
M3t2BS2_1341789	Not Available	625
M3t2BS2_1355375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	18338
M3t2BS2_1355611	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	838
M3t2BS2_1371239	All Organisms → Viruses → Predicted Viral	1074
M3t2BS2_1384941	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	624
M3t2BS2_1390866	All Organisms → cellular organisms → Bacteria → Proteobacteria	754
M3t2BS2_1425614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	3679
M3t2BS2_1430810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium SCGC AAA044-N04	6351
M3t2BS2_1441146	All Organisms → Viruses → Predicted Viral	2526
M3t2BS2_1466017	Not Available	652
M3t2BS2_1479876	Not Available	16349
M3t2BS2_1485576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium	780
M3t2BS2_1535408	Not Available	585
M3t2BS2_1635587	Not Available	593
M3t2BS2_1658871	Not Available	609
M3t2BS2_1689998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1108
M3t2BS2_1693958	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	600
M3t2BS2_1714279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845
M3t2BS2_1742621	Not Available	647
M3t2BS2_1744283	Not Available	1072
M3t2BS2_1746223	Not Available	610
M3t2BS2_1763635	Not Available	1398
M3t2BS2_1810077	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1190
M3t2BS2_1814121	All Organisms → Viruses → Predicted Viral	1920
M3t2BS2_1827637	All Organisms → cellular organisms → Bacteria	6910
M3t2BS2_1827686	Not Available	774
M3t2BS2_1869080	All Organisms → cellular organisms → Bacteria → Proteobacteria	804
M3t2BS2_1874250	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	856
M3t2BS2_1876187	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	761
M3t2BS2_1968170	Not Available	924
M3t2BS2_1981093	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	550

Sequences

Scaffold ID	Protein ID	Family	Sequence
M3t2BS2_1081820	M3t2BS2_10818201	F095514	MLVWPLFLLGQSVAIEVPHAFHGTHFKTFLEQGTSVRTWYEVSGRNAEDYMEVVRRIYQPSKDQTLRILDTYGDDQHTAVKIEAKGWIYILIQSNMGMADSKIQARQKEGQD*
M3t2BS2_1161840	M3t2BS2_11618402	F100425	MKLKLVATTKVYKNIGSMEVPMWRCVDGGEYIIKRYTKEPKWKEVGEAVNSFQHILEGKLAMDVKEIYAGFELYDNNSLTHGENFQLQNGGTIDFPAADATTIDVSEEMDGI
M3t2BS2_1186323	M3t2BS2_11863231	F012962	SITNLVSNTGVVATDTAGVGTARDTLAAAGYGADKAIFGFGYVPSYTNITNLVSNTGVVATNTAGVGTSRQYLAAAGFSLS*
M3t2BS2_1217923	M3t2BS2_12179232	F047562	MPAVCPGGPQSESSCATPDKTHPNRGVLANRATYLVLAKCLFVSSLLALTGCATNDPAPVASDEVIGDYDNACLPEAVMMAQALRRNGIKARVLIMRGDGWSHAVTAYQYPPEKGQIWCWDSDEQSVPVSARWTSSEILAGAWMRACQRQQRIVRARFE*
M3t2BS2_1250164	M3t2BS2_12501641	F091973	MRSLIDPVWFLLLFLTFAIFVKVANTKLNRVIKLLTRVSISILVFLSTGVATLIFDQILATETSPKSDWSPEFIFVLGGGYELGANAAQDFLGTESIRRINAASTLW
M3t2BS2_1258668	M3t2BS2_12586682	F097356	MSIRKKDRSFENMLREIHVEEVPVEYIDWIKVYLADGTEIIFKQKDLSDIKTSKEVLGIKQLEQYLDQIVDFEVMMNSELIKSKVTRFVGALLATHFNQEE*
M3t2BS2_1270976	M3t2BS2_12709762	F013762	AGYGGDKAIFGYGKTGTGSTNITNITNLVSNTGVVATDTAGVGTSRSDLAAAGYGGDKAIFGYGSTPTRVSMTNKVSNTGVVSSDNTGVGTARKQLAAAEFSI*
M3t2BS2_1314960	M3t2BS2_13149601	F016833	MGMIYLAQPRGNRIRSIDKLKPKDRKKPANCNNSNVKFGKHLSNFSDLKDRYERLVGDVDVKVIVKIPDNQIQEFESVLKRVFVKYIKKFQEESQTATREWMSGISIAEAKQTILSEFENHKNYYQKEDL*
M3t2BS2_1341789	M3t2BS2_13417891	F072383	MKVTIEYHDTESLTVEEIVKQVHTQYGKQAKVEVMPESMMAYDLIYHGLAMLMTHEQVSLLYDNKL
M3t2BS2_1355375	M3t2BS2_13553753	F043971	MSDEEYKEAQKFYKRLRLKGSKYQFKNTLGVRIKCFGVAAPNGHAELHEREIIVGIVEMVGPAPSFEDLVARLGLEAFNKVDVVYGFSESFKDAWNETIGVEPEGSL*
M3t2BS2_1355611	M3t2BS2_13556111	F035300	MKLHIQKTNRTIMDQLKIREDEGKFYVYFNGPFGSCAYQSDPFDTLEAAEAFKKEQEDSADFGDQE*
M3t2BS2_1371239	M3t2BS2_13712391	F080982	MTSYSPRIYIYKITFDEVLYYYYGVHKEKKFGEEYLGSPKTNKWCWDFYIPKKQVLEIFDCTDEGWMQALEVEKRLIKPFFNDDKWCLNEHCGGKFSIKHQKEAGRMG
M3t2BS2_1384941	M3t2BS2_13849412	F009749	MSEWILIIAMVSPGGDYIDKTTIELQSKKECEMVRVQLSYLDNPMWIGHKSLCVTKNHWTGKKKMPGVAYD*
M3t2BS2_1384941	M3t2BS2_13849413	F001008	MSKEAHKKYQWIDGETADRITSLNLKDYRANLKSELAKWKKNPKTDENPDGYWLHPEDVSGNMRRIEALNLIIGDFVETPDEIK*
M3t2BS2_1390866	M3t2BS2_13908662	F038542	MTDGVLSPSWGRVTLLVCALWPALGLSQSAGCLQSSAYYAEFYQGLYTMHRHGLDSFANDSADRQLYFFQVQRNGDKIEANLVKSVEADNTLSASDKNKLTQLHHAVGQRFRDMAATDAQNAQPKDRTSVLRSLQEACL*
M3t2BS2_1425614	M3t2BS2_14256144	F020034	MSFIEHAYRELKAIEPKITADEFSTKWLNKCSSYYRSYKASDRDMTVHALLCLLLNLKEQAAALRMNNQHQLLHKRANQYASLSDSVSRQLSDKISLH*
M3t2BS2_1430810	M3t2BS2_14308108	F042867	ISMYGAVSDVAPRQVVTKFAVVQAGSAARAAVGIETTVIESSDETATSVKERLNLKVLMSYLVILSLALPDV*
M3t2BS2_1441146	M3t2BS2_14411463	F058138	GTAKAYSYATGYGTDKAIFGFGSNSGGVYNVTNLVSNTGVVATDTAGVGTARALLAAASYNGDKAIFGYGSAANVNLSITNLVSNTGVVATDTTGVGTARNHLAAAGYGGDKAIFGYGYTTVNVSITNLVSNTGVVASDTTGVGSARNQLAAAGFSAS*
M3t2BS2_1466017	M3t2BS2_14660172	F086548	MNIDKAKAKTLIDKTRNFEGILLTKHDSASDRRTELANIKRKIDAALGTKEYVVCVFEV*
M3t2BS2_1472181	M3t2BS2_14721811	F104703	MLIPYEELRILYAHAINTVAWEEAQVVPRSGPYRGGLVFRKGRREFTLSFDAAAAPEIMNLQVVLPFALDDEDAGRSHKLVSRFNAEIRGVKFFLVDAPTPLLVCSIEAILASHRRIPNSEVVDAVLRNAMGRMEEAVEQVERELRVGR*
M3t2BS2_1479876	M3t2BS2_147987615	F001143	MSASLIAVIGVVYLVVAGSLFMDGKTGLAVAFLGYALGNVGLFMEARM*
M3t2BS2_1479876	M3t2BS2_147987616	F028789	METKNDSCSVTLIRENEDGSADFQFNFPQKELDALTRLGILTAIQAGLDDAKRLDPEI*
M3t2BS2_1479876	M3t2BS2_14798766	F063653	MPLTLPDLYDKLKRVDEVTLLELLNINSTDLVDRFQDFIEIHADNLEELLDDN*
M3t2BS2_1485576	M3t2BS2_14855762	F064405	STGRGPALVVCLLGGLIAFALALVGLVPEGDFSVKEPLDLIKLLFVFAPAFPFLMLAGVAMLLKDRFLLAGTIVIAVLLILSCGFYLMAQAEHRVRPDGTEHALTYLIVPFLQVPAVFTALGVLALWRAWLGRNA*
M3t2BS2_1535408	M3t2BS2_15354081	F080674	VVGIADKLQGVQELSSTCYDESECVLATFFALVLA*
M3t2BS2_1635587	M3t2BS2_16355872	F026746	FFVIMSKSVILSLLAQGNSGTEILTILDTLVADIEQENIDDVAEYYAAL*
M3t2BS2_1658871	M3t2BS2_16588713	F001008	MSKAKHKPYQWIDGETADRITSMNLKDYRAYLKKEIKQWKKNPKSEANPKGYWLHPEDVGINMQTIAALDLII
M3t2BS2_1689998	M3t2BS2_16899982	F103261	MSRIMLTASEARTKALQDIFVLREIRDLEEEVLLAAADGAVQVIVATTSTMAKNSADVGYATAAEYFDAWTGARDDRQKTLQMNKIVQYFSDLGYTIDRQTNSTTQTTFQWVIAW*
M3t2BS2_1693958	M3t2BS2_16939581	F008752	MATNTLKAQVPAEGILKKNDWGDAITYQVVCECGDDNHDHNVWIEADDTGVTVTTYTQQKSKWWELNRWKKIWILLTKGYIEYEATIIMREQQALNYAETLKTAIKDVKTFR
M3t2BS2_1714279	M3t2BS2_17142791	F033701	MTEQHKKVIRVEKTYWDMTHEEKYAYIKGSLEGFSPNEEVRARAKQPLSKDADLQSVSHPKAQSPRRHWWQLGTVVVVLVASIVFSIRLVSNPSSSAFDVARNLQVAGITCTPGELVTRSSGAVREGLPCTVGDLIYEITTYPTDQATDEVTRMVEDGVGCQLALSRSSSVFTMLIGDRFSIFVASRLPTGIEELTNTRIVFQDDCRAEAL*
M3t2BS2_1742621	M3t2BS2_17426211	F023835	MALNKPRTLQGEIAALEREINQHRRDMAEIEGNDGVTHGNVSDWLITSGRTLIDKGDELLSLLSLDPDFGKHRDAYMRELKTFRKFYKKWADKNSTDKNATE*
M3t2BS2_1744283	M3t2BS2_17442832	F039599	MLNEETVKQIFFQSDRPRKDPLIADEVDITQFAHNIEQYVAVEYALKEHARCVEMVKEMNRAVGEKLETLRPV*
M3t2BS2_1746223	M3t2BS2_17462233	F095049	KLLAELHPTYKMDDIKLLASIMTEEEKKELFDKMGFDKKQRKEYE*NLEKSL*
M3t2BS2_1763635	M3t2BS2_17636352	F050579	MKKQPDKAPIKSLRDAYQVSGFRVRARIDSYDELEHRAFVITLDRRSKKRSAADVGRFATAVTTNGGDGRAILDAAIGKSISTFTCAA*
M3t2BS2_1800459	M3t2BS2_18004591	F104489	VTRIITMRVDPSNARAQVQTAVPKAAERKPKPESQPLAEQAARPEAAKPSIKNNRIDVRA
M3t2BS2_1810077	M3t2BS2_18100771	F003329	MAYSDTYGQTVNVQTLIDHGARRCGKLAEELTSEQVVSARQSLGFLLSNLINRGIQYWCISKEVIGLSPNKYQYTLPDGAVDTLNVLYRTMTRPVGAYTSSAGGVV
M3t2BS2_1814121	M3t2BS2_18141212	F001009	MASNLNSEFNYRYQVIGSTPWEKIKTLKGFLVGRKRAAVLEECAELKYQAKLEEIKHLKTVPALPHILLNLQADLLETESVLEDQAHAFELNRKEIKILEKLLNELYTEVEPTRLTHEDGTPYTDDEMFEENANYEFTVTVGRELQSEIIALGRPSPAKLLNAMSNPQTLDTLMKIGIVPAGTRLLTKDDVTLQISNSTNNNPELSTNV*
M3t2BS2_1827637	M3t2BS2_18276372	F020009	MALLDDIEQTEPTAEEIAQARENALGATHPASWVWDESVTSYVAPITPPTDGYPYLWDETAGNWVAFPGFPRD*
M3t2BS2_1827686	M3t2BS2_18276862	F010227	MQATTFNVSDKLTLASTETDEDSVSTTYDCNVEVQLAGDSIWDCELEAVTVKSIHIYENFDEDGDSSIHIRVGYNVDGVDGSEVEGSWRIYTDNGFSDAISALLGTAVDFTEQGMQDDGYASME*
M3t2BS2_1869080	M3t2BS2_18690801	F082170	MLIALGQKSQMQPQQLRRAEDRKAFDYIFLFGPFEAPLTRG
M3t2BS2_1874250	M3t2BS2_18742503	F009748	FINSFSINEEWMEELRTYVGIITVSASSIQLILQNRTAGRYTNDNSWQFFNNGDTSMNRVPFISTINYYFGKTQ*
M3t2BS2_1876187	M3t2BS2_18761872	F009605	MKTILNSIWSFLEALGQARYAASLARQGRISEAKAVYK*
M3t2BS2_1968170	M3t2BS2_19681703	F093284	MSERAQNLMDQIWNIRGLNPDMTEKELVSSVLQLAVEHIQFYNAQNDMIVLDKNDLLKLAEELK*
M3t2BS2_1981093	M3t2BS2_19810931	F102527	AGGMPDYLSAANRPAKGTESQSVLTHFSHDKNLQMLDPTRYGTGIKGAEAERLREYAGGVKDRSYFYMGEPGTVAPEAGLGVNRYRGESQNLYDITKDPLSFRALARESNRNPYTSKYNAGIAHPLQDANDYERLVKEYGYDGMINPNSSKPMGIMFKPTPVQPRKRGGLTQIKAR*