Metagenome / Metatranscriptome Family F097372

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097372
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	130 residues
Representative Sequence	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDAATIA
Number of Associated Samples	72
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.88 %
% of genes near scaffold ends (potentially truncated)	31.73 %
% of genes from short scaffolds (< 2000 bps)	73.08 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (38.462 % of family members)
Environment Ontology (ENVO)	Unclassified (34.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (76.923 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.77% β-sheet: 0.00% Coil/Unstructured: 29.23%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01443	Viral_helicase1	16.35
PF00978	RdRP_2	2.88
PF04250	DUF429	2.88

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	2.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Viruses	superkingdom	All Organisms → Viruses	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Riboviria	clade	All Organisms → Viruses → Riboviria	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Orthornavirae	kingdom	All Organisms → Viruses → Riboviria → Orthornavirae	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Kitrinoviricota	phylum	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alsuviricetes	class	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Martellivirales	order	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Togaviridae	family	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Alphavirus	genus	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
unclassified Alphavirus	no rank	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Fusarium sacchari alphavirus-like virus 1	species	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	37.50 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004471\|Ga0068965_1037922	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1582	Open in IMG/M
3300004471\|Ga0068965_1044847	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7207	Open in IMG/M
3300004471\|Ga0068965_1329409	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1732	Open in IMG/M
3300004471\|Ga0068965_1329931	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7223	Open in IMG/M
3300004472\|Ga0068974_1388272	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	5729	Open in IMG/M
3300004475\|Ga0068969_1057998	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7061	Open in IMG/M
3300004475\|Ga0068969_1498405	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1523	Open in IMG/M
3300004476\|Ga0068966_1425973	Not Available	1165	Open in IMG/M
3300004555\|Ga0068922_1004069	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7835	Open in IMG/M
3300004555\|Ga0068922_1159149	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	4257	Open in IMG/M
3300004560\|Ga0068940_1205472	Not Available	1051	Open in IMG/M
3300004594\|Ga0068976_1232840	Not Available	645	Open in IMG/M
3300004594\|Ga0068976_1236470	Not Available	510	Open in IMG/M
3300004600\|Ga0068964_1272038	Not Available	1655	Open in IMG/M
3300004615\|Ga0068926_1009695	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7754	Open in IMG/M
3300004615\|Ga0068926_1018353	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1468	Open in IMG/M
3300006423\|Ga0075039_1422256	Not Available	1219	Open in IMG/M
3300010154\|Ga0127503_10058439	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7896	Open in IMG/M
3300010154\|Ga0127503_10313192	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7974	Open in IMG/M
3300010858\|Ga0126345_1150386	Not Available	1083	Open in IMG/M
3300010861\|Ga0126349_1041438	Not Available	1688	Open in IMG/M
3300010861\|Ga0126349_1090996	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	3093	Open in IMG/M
3300010861\|Ga0126349_1151694	Not Available	847	Open in IMG/M
3300010864\|Ga0126357_1294297	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1743	Open in IMG/M
3300010869\|Ga0126359_1145706	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7945	Open in IMG/M
3300011021\|Ga0138529_107831	Not Available	847	Open in IMG/M
3300011060\|Ga0138583_1033601	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7881	Open in IMG/M
3300011060\|Ga0138583_1050496	Not Available	1686	Open in IMG/M
3300011060\|Ga0138583_1052362	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	3573	Open in IMG/M
3300011077\|Ga0138572_1109034	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7328	Open in IMG/M
3300011078\|Ga0138565_1012765	Not Available	1667	Open in IMG/M
3300011085\|Ga0138581_1023624	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	6296	Open in IMG/M
3300019165\|Ga0184589_127192	Not Available	753	Open in IMG/M
3300019165\|Ga0184589_135445	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7083	Open in IMG/M
3300019173\|Ga0184575_107849	Not Available	795	Open in IMG/M
3300019176\|Ga0184596_108207	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	7996	Open in IMG/M
3300019185\|Ga0184587_137623	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	3861	Open in IMG/M
3300019190\|Ga0184600_102470	Not Available	636	Open in IMG/M
3300022532\|Ga0242655_10171534	Not Available	648	Open in IMG/M
3300022711\|Ga0242674_1045383	Not Available	591	Open in IMG/M
3300022714\|Ga0242671_1022087	Not Available	895	Open in IMG/M
3300023539\|Ga0247555_103476	Not Available	557	Open in IMG/M
3300023551\|Ga0247546_100646	Not Available	1062	Open in IMG/M
3300023556\|Ga0247519_107354	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1041	Open in IMG/M
3300023559\|Ga0247529_104520	Not Available	1373	Open in IMG/M
3300023562\|Ga0247516_103439	Not Available	1801	Open in IMG/M
3300023563\|Ga0247530_103472	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1409	Open in IMG/M
3300023563\|Ga0247530_108369	Not Available	851	Open in IMG/M
3300023563\|Ga0247530_117999	Not Available	508	Open in IMG/M
3300023564\|Ga0247515_102542	Not Available	1987	Open in IMG/M
3300023564\|Ga0247515_104967	Not Available	1518	Open in IMG/M
3300023564\|Ga0247515_110839	Not Available	958	Open in IMG/M
3300023662\|Ga0247545_100811	Not Available	974	Open in IMG/M
3300023664\|Ga0247527_113720	Not Available	539	Open in IMG/M
3300023666\|Ga0247531_100013	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	6913	Open in IMG/M
3300023666\|Ga0247531_102893	Not Available	1612	Open in IMG/M
3300023668\|Ga0247525_102759	Not Available	1762	Open in IMG/M
3300023668\|Ga0247525_105615	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1249	Open in IMG/M
3300023668\|Ga0247525_116569	Not Available	567	Open in IMG/M
3300023672\|Ga0247553_100054	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	2822	Open in IMG/M
3300023686\|Ga0247520_106122	Not Available	1175	Open in IMG/M
3300023689\|Ga0247517_101484	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	2266	Open in IMG/M
3300023690\|Ga0247512_106968	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1285	Open in IMG/M
3300030539\|Ga0210281_1001880	Not Available	1157	Open in IMG/M
3300030629\|Ga0210268_1003320	Not Available	1714	Open in IMG/M
3300030743\|Ga0265461_10024617	Not Available	1824	Open in IMG/M
3300030758\|Ga0138305_1135327	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	2468	Open in IMG/M
3300030776\|Ga0075396_1023742	Not Available	1706	Open in IMG/M
3300030777\|Ga0075402_10111538	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	2538	Open in IMG/M
3300030778\|Ga0075398_10105380	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	2533	Open in IMG/M
3300030839\|Ga0073999_10051603	Not Available	1502	Open in IMG/M
3300030839\|Ga0073999_10131520	Not Available	1239	Open in IMG/M
3300030841\|Ga0075384_11278777	Not Available	1953	Open in IMG/M
3300030849\|Ga0075393_10105506	Not Available	1622	Open in IMG/M
3300030917\|Ga0075382_10128426	Not Available	1836	Open in IMG/M
3300030945\|Ga0075373_11123939	Not Available	545	Open in IMG/M
3300031023\|Ga0073998_10135073	Not Available	1163	Open in IMG/M
3300031048\|Ga0074025_1057341	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1129	Open in IMG/M
3300031057\|Ga0170834_108066888	Not Available	521	Open in IMG/M
3300031057\|Ga0170834_110157756	Not Available	1662	Open in IMG/M
3300031231\|Ga0170824_105256235	Not Available	1629	Open in IMG/M
3300031231\|Ga0170824_121090250	Not Available	746	Open in IMG/M
3300031231\|Ga0170824_128089845	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	2249	Open in IMG/M
3300031446\|Ga0170820_12530136	Not Available	1653	Open in IMG/M
3300031810\|Ga0316044_108558	Not Available	1264	Open in IMG/M
3300031814\|Ga0247548_100096	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	2322	Open in IMG/M
3300031815\|Ga0316045_114293	Not Available	847	Open in IMG/M
3300031828\|Ga0316043_130356	Not Available	539	Open in IMG/M
3300031866\|Ga0316049_104613	Not Available	881	Open in IMG/M
3300031872\|Ga0316033_100189	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	2276	Open in IMG/M
3300031956\|Ga0316032_104283	Not Available	680	Open in IMG/M
3300032027\|Ga0247536_100165	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	1894	Open in IMG/M
3300032028\|Ga0316052_100073	All Organisms → Viruses → Riboviria → Orthornavirae → Kitrinoviricota → Alsuviricetes → Martellivirales → Togaviridae → Alphavirus → unclassified Alphavirus → Fusarium sacchari alphavirus-like virus 1	2875	Open in IMG/M
3300032028\|Ga0316052_101672	Not Available	1086	Open in IMG/M
3300032119\|Ga0316051_1014187	Not Available	688	Open in IMG/M
3300032119\|Ga0316051_1033031	Not Available	514	Open in IMG/M
3300032515\|Ga0348332_11274696	Not Available	911	Open in IMG/M
3300032515\|Ga0348332_12774595	Not Available	749	Open in IMG/M
3300032515\|Ga0348332_12785010	Not Available	1010	Open in IMG/M
3300032515\|Ga0348332_13403263	Not Available	686	Open in IMG/M
3300032515\|Ga0348332_14044808	Not Available	691	Open in IMG/M
3300032515\|Ga0348332_14208105	Not Available	1136	Open in IMG/M
3300032515\|Ga0348332_14533321	Not Available	600	Open in IMG/M
3300032739\|Ga0315741_11736586	Not Available	553	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.08%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.35%
Plant Litter	Environmental → Terrestrial → Plant Litter	6.73%
Freshwater	Environmental → Aquatic → Freshwater	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.38%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	6.73%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	66.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.04%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	38.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	22.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.73%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	6.73%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	5.77%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.92%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004471	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004472	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004475	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004555	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 7 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004560	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 28 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004594	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004600	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 56 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004615	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 11 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006423	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_056 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010864	Boreal forest soil eukaryotic communities from Alaska, USA - W3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011021	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 7 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011060	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011077	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011078	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011085	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300019165	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019173	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019176	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019185	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019190	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023539	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023551	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023556	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023559	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023562	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023563	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023564	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023662	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023664	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023666	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023668	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023672	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023686	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023689	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023690	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030539	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO151-VCO111SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030629	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030758	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_OS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030776	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030777	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030778	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030839	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFB (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030841	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030849	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031048	Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 13 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031810	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031814	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031815	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRA2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031828	Metatranscriptome of spruce roots microbial communities from Bohemian Forest, Czech Republic - CRU3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031872	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031956	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032027	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032028	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032739	Forest Soil Metatranscriptomics Site 2 LB Combined Assembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0068965_10379222	3300004471	Peatlands Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAIIQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIS*
Ga0068965_10448472	3300004471	Peatlands Soil	MSDESIAHTIRNILTQCGSTVISIGHTEGHFLSSKQFAVLEECADTLESLESVAGVDTPTSSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDVTTIA*
Ga0068965_13294092	3300004471	Peatlands Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARKLELARELKQKQIRLTAAPPGERSQINLEIGKLLSERARLDKLIKQFDAATIA*
Ga0068965_13299312	3300004471	Peatlands Soil	MSDESIAHTIRNILEQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGNRSQINLEIGKLLSERARLDKLIKQFDATTIA*
Ga0068974_13882721	3300004472	Peatlands Soil	MSDESIAHTIRNILTQCNSTVISIGHIEGHFLSSKQFAVLEECADTLESLESVAGVDTPTSSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERA
Ga0068969_10579982	3300004475	Peatlands Soil	MSDESIAHTIRNILTQCNSTVISIGHTEGHFLSSKQFAVLEECADTLESLESVAGVDTPTSSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDVTTIA*
Ga0068969_14984052	3300004475	Peatlands Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGERSQINLEIGKLLSERARLDKLIKQFDAATIA*
Ga0068966_14259731	3300004476	Peatlands Soil	MSDESIAHTIRNILTQCNSTVISIGHTEGHFLSSKQFAVLEECADTLESLESVAGVHTPTSSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDVTTIA*
Ga0068922_10040693	3300004555	Peatlands Soil	MSDESIAHTIRNILTQCNSTAISIGHIEGHFLSSKQFAVLEECADTLESLESVVGVDTPTSSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDVTTIA*
Ga0068922_11591492	3300004555	Peatlands Soil	MSDESIAHTIRNILEQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGNRSHVNLEIGKLLSERARLD
Ga0068940_12054721	3300004560	Peatlands Soil	MSDESIAHTIRNILTQCNSTVISIGHTEGHFLSSKQFAVLEECADSLESLESVAGVDTPTSSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEVGKLLSERARLDKLIKQFDVTTIA*
Ga0068976_12328401	3300004594	Peatlands Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARKLELARELKQKQIRLTAAPPGERSQINLEIGKLLSERARLDKLIKQFDA
Ga0068976_12364701	3300004594	Peatlands Soil	QCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGNRSQINLEIGKLLSERARLDKLIKQFDATTIA*
Ga0068964_12720381	3300004600	Peatlands Soil	MSDESIAHTIRNILTQCNSTAISIGHIEGHFLSSKQFAVLEECADTLESLESVVGVDTPTSSAITQASSEEDGFRARRLELARELKQKQIRLTVAPPGDRSQINLEIGKLLSERARLDKLIKQFDVTTIA*
Ga0068926_10096953	3300004615	Peatlands Soil	MSDESIAHTIRNILTQCNSTAISIGHIEGHFLSSKQFAVLEECADTLESLESVVGVDTPTSSAITQASSEEDGFWARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDVTTIA*
Ga0068926_10183532	3300004615	Peatlands Soil	MSDESIAHTIRNILEQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGNRSHINLEIGKLLSERARLDKLIKQFDATTIA*
Ga0075039_14222561	3300006423	Permafrost Soil	MSDESIAHTIRNILEQCSSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQLQLTAAPAGNRSQINNDIGKLLSERAKIDKLIRQFDASTIV*
Ga0127503_100584393	3300010154	Soil	MSDESIAHTIRNILNQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAASPGNRSQINLEIGKLSSERAKLDKLIKQFDTATVV*
Ga0127503_103131924	3300010154	Soil	MSDESIAHTIRNILKQCNSTTISIGHTEGHFLSSKQFTVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAAAPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV*
Ga0126345_11503862	3300010858	Boreal Forest Soil	MSDESIAHTIRNILKQCSSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAASPGNRSQINLEIGKLLSERSKLDKLIKQFETATIV*
Ga0126349_10414383	3300010861	Boreal Forest Soil	MSNESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLDSVAGIDTPSSSAITQASTEEDGVRSRKLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLSERARLDKLIKQFDTATIV*
Ga0126349_10909963	3300010861	Boreal Forest Soil	MSDESIAHTIRNILKQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAAPGDRSQINLEIGKLLSERAKLDRLIKQFDAATIV*
Ga0126349_11516942	3300010861	Boreal Forest Soil	MSDESVAHTIRNILKQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGIRSRRLQLAREIKQKQIQLTAASPGNRSQINLEIGKLLSERSKIDKLVKQFDTATIV*
Ga0126357_12942972	3300010864	Boreal Forest Soil	MSNESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLDSVAGIDTPSSSAITQASTEEDGVRSRKLQLAREIKQKQIRLTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV*
Ga0126359_11457063	3300010869	Boreal Forest Soil	MSDESIAHTIRNILKQCNSTTISIGHTEGHFLSSKQFVVLEECADTLESLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAAPGDRSQINLEVGKLLSERAKLDKLIKQFDAATIV*
Ga0138529_1078312	3300011021	Peatlands Soil	MSDESIAHTVRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGERSQINLEIGKLLLERARLDKLIKQFDAATIA*
Ga0138583_10336013	3300011060	Peatlands Soil	MSDESIAHTIRNILTQCGSTVISIGHTEGHFLSSKQFALLEECADTLESLESVAGVDTPTSSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDVTTIA*
Ga0138583_10504961	3300011060	Peatlands Soil	EMSDESIAHTIRNILEQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEKDGFRARRLELARELKQKQIRLTAAPPGNRSQINLEIGKLLSERARLDKLIKQFDATTIA*
Ga0138583_10523621	3300011060	Peatlands Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAIIQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDVTTIA*
Ga0138572_11090342	3300011077	Peatlands Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAIIQASSEEDGFRARRLELARELKQKQIRLTAAPPADRSQINLEIGKLLSERARLDKLIKQFDATTIS*
Ga0138565_10127652	3300011078	Peatlands Soil	MSDESIAHTIRNILTQCNSTAISIGHIEGHFLSSKQFAVLEECADTLESLESVVGVDTPTSSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDVTIIA*
Ga0138581_10236242	3300011085	Peatlands Soil	MSDESIAHTIRNILTQCNSTVISIGHIEGHFLSSKQFAVLEECADTLESLESVAGVDTPTSSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSGRARLDKLIKQFDVTTIA*
Ga0184589_1271922	3300019165	Soil	SDESIAHTIRNILKQCNSTVISIGHTEGHFLSFKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0184589_1354452	3300019165	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEENGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0184575_1078491	3300019173	Soil	MSDTSVAHTIRNILAQCNSTTISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDAATIA
Ga0184596_1082072	3300019176	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0184587_1376233	3300019185	Soil	MSNESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0184600_1024701	3300019190	Soil	LLCWIGTQHANSIASGLLNYNYSTTEMSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPATSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0242655_101715342	3300022532	Soil	SDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLESLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQLDATTIA
Ga0242674_10453831	3300022711	Soil	MSDESIAHTVRNILKQCNSTTISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPATSAIALASSEEDGFRVRRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQLDATTIA
Ga0242671_10220872	3300022714	Soil	VVSLLQFSTNEMSNESIAHTIRNILEQCNSTIISIGHTEGHFLSSKQSAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGIRSRGLQLAREIKQKQIQLTAALPGNRSQINLDIGKLLSERAKLDKTYQTI
Ga0247555_1034761	3300023539	Soil	MSDESIAHSIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEVGKLLSERARLDKLIKQFD
Ga0247546_1006462	3300023551	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDAATIA
Ga0247519_1073542	3300023556	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPATSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0247529_1045202	3300023559	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECAGTLENLESVAGVDTPATSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0247516_1034391	3300023562	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLEDLESVAGVDTPTTSAITQASSEEDGFRARRLELARELRQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0247530_1034722	3300023563	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADILENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0247530_1083692	3300023563	Soil	TVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDAATIA
Ga0247530_1179991	3300023563	Soil	MSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAASPSNRSQINLDIGKLLSERAKLDKLIKQFDTAAIVXHAFPHFNSIDRXVWVGSRLQIR
Ga0247515_1025421	3300023564	Soil	VNSIASGLLNFNYSTIEMSDESIAHTIRNILKQCNSTTISIGHTEGHFLSSRQFAVLEECADTLENLESVAGVDTPTTSVITQASSEEDGFRARRLELARELKQKQIRLTAAAPGDRSQINLEIGKLLSERARLDKLIKQFDAATIA
Ga0247515_1049671	3300023564	Soil	SSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0247515_1108391	3300023564	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELTRELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0247545_1008112	3300023662	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEDCADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAALPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0247527_1137201	3300023664	Soil	HFNVGLVPNTRTPSRMVCLLQYSTVGMSNESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECVDTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLITALPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0247531_1000132	3300023666	Soil	MSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTTTIV
Ga0247531_1028931	3300023666	Soil	TIGMSDNSIAHTIRNILAQCNSTTISIGHTEGHFLSSKQFAVLEECVDTLESLESVAGIDTPSSSTTTQASAEEDGVRSRRLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDAATIV
Ga0247525_1027593	3300023668	Soil	MSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAIIQASTEEDGVRSRRLQLAREIKQKQIQLTAASPSNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0247525_1056152	3300023668	Soil	MSDESIAHTIRNILKQCSSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0247525_1165692	3300023668	Soil	TIEMSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLESLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDAMTIA
Ga0247553_1000542	3300023672	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEDCADTLENLESVAGVDTPTTSAITPASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0247520_1061222	3300023686	Soil	MSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAASPTNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0247517_1014842	3300023689	Soil	MSSESIAHTIQNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLGSLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0247512_1069682	3300023690	Soil	MSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIGTPSSSAIAQASTEEDGVRSRRLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0210281_10018801	3300030539	Soil	PNTRTPSRVVCLLQFSTIGMSNESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGIRSRRLQLAREIKQKQIQLIAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0210268_10033201	3300030629	Soil	LEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLGSLGSAAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0265461_100246174	3300030743	Soil	MLVWYPTRELHREWSAYYNFSTVGMSSESVAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGIRSRRLQLAREIKQKQIQLIAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0138305_11353272	3300030758	Soil	VNSITSGLLNYNFSTIEMSDESIAHTIRNILEQCNSTIISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGLRARRLQLARELKQKQVRLTAAAPGDRSQINLEIGKLLSERAKLDRLLKQLDTIS
Ga0075396_10237421	3300030776	Soil	SDESIAHTIRNILKQCNSTTISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRTRRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0075402_101115383	3300030777	Soil	MSDESIAHTIRNILEQCNSTTISIGRTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITEASTEEDGIRSRRLQLAREIKQKQIQLTAALSGNRSQINLDIGKLLSERAKLDRLIKQFDTATIV
Ga0075398_101053802	3300030778	Soil	MSDESIAHTIRNILEQCNSTTISIGRTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITEASTEEDGIRSRRLQLAREIKQKQIQLTAALPGNRSQINLDIGKLLSERAKLDRLIKQFDTATIV
Ga0073999_100516033	3300030839	Soil	VSLLQFSTIDMSDESIAHTIRNILKQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVADIDTPSSSAITQASTEEDGARSRRLQLAREIKQKQIQLTAASPGNRSQINLEIGKLLSERSKLDKLIKQFDTATIV
Ga0073999_101315201	3300030839	Soil	MSNERIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAASLGNRSQINLDIGKLLSERAKIDKLIKQFDTATIV
Ga0075384_112787774	3300030841	Soil	MSDESIAHTIRNILKQCNSTTISIGHSEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITRASTEEDGIRARRLQLAREIKQKQIQLSAALPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0075393_101055061	3300030849	Soil	MSDESIAHTIRNILKQCNSTTISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRTRRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0075382_101284261	3300030917	Soil	MLNYNYSTTEMSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDAATIA
Ga0075373_111239392	3300030945	Soil	GHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELAHELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0073998_101350731	3300031023	Soil	TTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAVTQASTEEDGVRSRKLQLAREIKQKQIQLTAASPGNRSQINLEIGKLLSERSKLDKLIKQFDTATIV
Ga0074025_10573412	3300031048	Soil	MTENSTINIIKNILAQCNSTVISIGHTEGHFLSSKQLVVLKECVDDLTDLESVADIDTPSSSQITEASTEEDAVRARRLQLAREIRNKQLQLASTSAANRSEINLDIGKLLSERARLDKLIKQFDTIAIV
Ga0170834_1080668881	3300031057	Forest Soil	ISIGHTEGHFLSSKQFAVLEDCANTLESLESVAGIDTPSSSTITQATTEEDGIRARRLQLVHEIKQKQIQLTAATSGNRSQINLEIGKLLSERAKLDKLIRQLDAATIA
Ga0170834_1101577563	3300031057	Forest Soil	AHTIRNILEQCNATIISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGIRSRRLQLAREIKQKQIELTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0170824_1052562351	3300031231	Forest Soil	ISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELAHELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0170824_1210902501	3300031231	Forest Soil	MLNYNYSTTEMSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPRDRSQINLEIGKLLSERARLDKLIKQFDAATIA
Ga0170824_1280898453	3300031231	Forest Soil	MSDESIAHTIRNILEQCNSTTISIGRTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITEASTEEDGIRLRRLQFAREIKQKQIQLTAALPGNRSQINLDIGKLLSERAKLDRLIKQFDTATIV
Ga0170820_125301361	3300031446	Forest Soil	LKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELAHELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0316044_1085583	3300031810	Soil	VSGPLNYNYSTIEMSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0247548_1000962	3300031814	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINPEIGKLLSERARLDKLIKQFDATTIA
Ga0316045_1142931	3300031815	Soil	MSDESIAHTIRDILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0316043_1303562	3300031828	Soil	VCLLQFSTIVMSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLAVASPGNRSQINLGIGKLLSERAKLDKLIKQFDTATIV
Ga0316049_1046131	3300031866	Soil	MSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0316033_1001892	3300031872	Soil	MSDTSVAHTIRNILAQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGVDTPSSSAILQATTEEDGIRSRRLQLAREIKQKQIQLTAAPPGNRSQINLDIGKLLSERSRLDKLIRQLDAATIV
Ga0316032_1042832	3300031956	Soil	MSDESIAHTIRNILKQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGVDTPTISATTQASSEEDGFRARRLELARELKQKQIRLTAAAPGDRSQINLEIGKLLSERAKLDKLIKQFDAATIL
Ga0247536_1001653	3300032027	Soil	MAIGLRSKHPTSMLVWYPTRELHREWSAYYNFSTVVMSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLIAASPSNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0316052_1000733	3300032028	Soil	MSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEDCADTLENLESVADVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEVGKLLSERARLDKLIKQFDATTIA
Ga0316052_1016721	3300032028	Soil	MSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECVDTLESLESVAGIDTPSSSAITQASTEEDGVRARRLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0316051_10141871	3300032119	Soil	MSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRSHRLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLS
Ga0316051_10330312	3300032119	Soil	YSTTEMSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSVITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEVGKLLSERARLDKLIKQFDATTIA
Ga0348332_112746961	3300032515	Plant Litter	GLLNYNYSTTEMSDESIAHTIRNILKQCNSTVISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPTTSAITQASSEEDGFRARRLELARELKQKQIRLTAAPPGDRSQINLEIGKLLSERARLDKLIKQFDATTIA
Ga0348332_127745951	3300032515	Plant Litter	MSSESIAHTIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGIDTPSSSAIIQASTEEDGVRSRRLQLAREIKQKQIQLTAASPGNRSQINLDIGKLLSERAKLDKLIKQF
Ga0348332_127850101	3300032515	Plant Litter	TIRNILEQCNSTTISIGHTEGHFLSSKQFAVLEECVDTLESLESVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLITALPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0348332_134032632	3300032515	Plant Litter	MSDESIAHTIRNILKQCNSTTISIGHTEGHFLSSKQFAVLEECADTLESLESVAGVDTPTISATTQASSEEDGFRARRLELARELKQKQIRLTAAAPGDRSQINLEIGKLLSERAKLDKLIKRFDAATIL
Ga0348332_140448082	3300032515	Plant Litter	MSDNSIAHTIRNILAQCNSTTISIGHTEGHFLSSNQFAVLEECADTLESLESVAGIDTPSSSAITQASTEEDGVRARRLQLAREIKQKQIQLTAAPPGKRSQINLDIGKLLSERAKLDKLIRQFDTATIV
Ga0348332_142081053	3300032515	Plant Litter	CNSTTISIGHTEGHFLSSKQFAVLEECADTLENLESVAGVDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQVQLTAASPGNRSQINLDIGKLLSERAKLDKLIKQFDAATIV
Ga0348332_145333211	3300032515	Plant Litter	MSNESIAHTIRNILGQCNSTTISIGHTEGHFLSSKQFAVLEECADTLEGLDSVAGIDTPSSSAITQASTEEDGVRSRRLQLAREIKQKQIQLTAALPGNRSQINLDIGKLLSERAKLDKLIKQFDTATIV
Ga0315741_117365861	3300032739	Forest Soil	MTENSAVNTIKNILTQCSSTVISIGHTEGHFLSSKQLVVLKECVDDLTDLESVAEIDTPSTSQITEASTDEDAVRARRLQLAREIRNKQLQLVTTSAGNRSQINLDIGKLLSERARLDKLIRQFDTIAIV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097372

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences