Metagenome / Metatranscriptome Family F088701

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F088701
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	65 residues
Representative Sequence	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVINT
Number of Associated Samples	95
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.72 %
% of genes near scaffold ends (potentially truncated)	47.71 %
% of genes from short scaffolds (< 2000 bps)	82.57 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (80.734 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere (17.431 % of family members)
Environment Ontology (ENVO)	Unclassified (43.119 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.780 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.85% β-sheet: 9.23% Coil/Unstructured: 36.92%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF00361	Proton_antipo_M	28.44
PF00510	COX3	1.83
PF00119	ATP-synt_A	1.83
PF00507	Oxidored_q4	1.83
PF00116	COX2	0.92
PF12771	SusD-like_2	0.92
PF00115	COX1	0.92
PF00146	NADHdh	0.92
PF03175	DNA_pol_B_2	0.92
PF06455	NADH5_C	0.92
PF03161	LAGLIDADG_2	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	1.83
COG0838	NADH:ubiquinone oxidoreductase subunit 3 (chain A)	Energy production and conversion [C]	1.83
COG1009	Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit	Energy production and conversion [C]	1.83
COG1845	Heme/copper-type cytochrome/quinol oxidase, subunit 3	Energy production and conversion [C]	1.83
COG0650	Formate hydrogenlyase subunit HyfC	Energy production and conversion [C]	0.92
COG1005	NADH:ubiquinone oxidoreductase subunit 1 (chain H)	Energy production and conversion [C]	0.92
COG1622	Heme/copper-type cytochrome/quinol oxidase, subunit 2	Energy production and conversion [C]	0.92
COG4263	Nitrous oxide reductase	Inorganic ion transport and metabolism [P]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
All Organisms	root	All Organisms	19.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
cellular organisms	root	All Organisms → cellular organisms	18.35 %
Viruses	superkingdom	All Organisms → Viruses	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.17 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	9.17 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	9.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.34 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	9.17 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.75 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.92 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	9.17 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	3.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.75 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	9.17 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	3.67 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.75 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	7.34 %
Bacillales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis	3.67 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.75 %
Calotrichaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	7.34 %
Bacillales Family XI. Incertae Sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis	3.67 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	2.75 %
Dulcicalothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	7.34 %
Gemella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella	3.67 %
Microbacterium laevaniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2.75 %
Dulcicalothrix desertica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix → Dulcicalothrix desertica	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
dothideomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta	7.34 %
unclassified Gemella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella	3.67 %
Microbacterium laevaniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2.75 %
Dulcicalothrix desertica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix → Dulcicalothrix desertica	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Dothideomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes	7.34 %
Gemella sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	3.67 %
Microbacterium laevaniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2.75 %
Dulcicalothrix desertica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix → Dulcicalothrix desertica	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Pleosporomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae	7.34 %
Gemella sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	3.67 %
Microbacterium laevaniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2.75 %
Dulcicalothrix desertica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix → Dulcicalothrix desertica	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Pleosporales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales	7.34 %
Gemella sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	3.67 %
Microbacterium laevaniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2.75 %
Dulcicalothrix desertica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix → Dulcicalothrix desertica	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Pleosporineae	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae	3.67 %
Gemella sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	3.67 %
Microbacterium laevaniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2.75 %
Dulcicalothrix desertica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix → Dulcicalothrix desertica	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Gemella sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	3.67 %
Microbacterium laevaniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2.75 %
Didymellaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Didymellaceae	1.83 %
Phaeosphaeriaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Phaeosphaeriaceae	1.83 %
Dulcicalothrix desertica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix → Dulcicalothrix desertica	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Gemella sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	3.67 %
Microbacterium laevaniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2.75 %
Parastagonospora	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Phaeosphaeriaceae → Parastagonospora	1.83 %
Didymella	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Didymellaceae → Didymella	1.83 %
Dulcicalothrix desertica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix → Dulcicalothrix desertica	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	80.73 %
Gemella sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	3.67 %
Microbacterium laevaniformans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2.75 %
Didymella exigua	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Didymellaceae → Didymella → Didymella exigua	1.83 %
Parastagonospora nodorum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Phaeosphaeriaceae → Parastagonospora → Parastagonospora nodorum	1.83 %
Dulcicalothrix desertica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix → Dulcicalothrix desertica	0.92 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003316\|rootH1_10047253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2644	Open in IMG/M
3300003316\|rootH1_10109229	Not Available	1915	Open in IMG/M
3300003322\|rootL2_10193404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	3098	Open in IMG/M
3300003845\|Ga0058699_1012558	Not Available	533	Open in IMG/M
3300004186\|Ga0066647_10029544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium laevaniformans	2451	Open in IMG/M
3300005327\|Ga0070658_11508591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Calotrichaceae → Dulcicalothrix → Dulcicalothrix desertica	583	Open in IMG/M
3300005435\|Ga0070714_100296665	All Organisms → cellular organisms → Bacteria	1506	Open in IMG/M
3300005459\|Ga0068867_101478754	Not Available	632	Open in IMG/M
3300005539\|Ga0068853_102057689	Not Available	554	Open in IMG/M
3300005563\|Ga0068855_100345228	Not Available	1640	Open in IMG/M
3300005616\|Ga0068852_101694768	Not Available	654	Open in IMG/M
3300005618\|Ga0068864_100619629	Not Available	1051	Open in IMG/M
3300005661\|Ga0058698_10779977	Not Available	598	Open in IMG/M
3300005834\|Ga0068851_10338591	Not Available	873	Open in IMG/M
3300005842\|Ga0068858_102180717	Not Available	548	Open in IMG/M
3300006755\|Ga0079222_10087758	Not Available	1592	Open in IMG/M
3300006806\|Ga0079220_10267119	All Organisms → Viruses → Predicted Viral	1035	Open in IMG/M
3300006954\|Ga0079219_10257357	Not Available	1044	Open in IMG/M
3300007218\|Ga0103964_1054821	Not Available	629	Open in IMG/M
3300009036\|Ga0105244_10371798	Not Available	658	Open in IMG/M
3300009553\|Ga0105249_10924868	Not Available	939	Open in IMG/M
3300010375\|Ga0105239_10029368	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	6045	Open in IMG/M
3300010375\|Ga0105239_10922821	Not Available	1002	Open in IMG/M
3300012404\|Ga0134024_1360779	Not Available	723	Open in IMG/M
3300012480\|Ga0157346_1004881	Not Available	810	Open in IMG/M
3300012507\|Ga0157342_1075293	Not Available	521	Open in IMG/M
3300012888\|Ga0160429_1071179	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales	1348	Open in IMG/M
3300012888\|Ga0160429_1108192	Not Available	1023	Open in IMG/M
3300012888\|Ga0160429_1183593	Not Available	721	Open in IMG/M
3300012890\|Ga0160428_1281596	Not Available	591	Open in IMG/M
3300012894\|Ga0160427_10065481	Not Available	1632	Open in IMG/M
3300012985\|Ga0164308_10895215	Not Available	781	Open in IMG/M
3300013100\|Ga0157373_10404229	Not Available	979	Open in IMG/M
3300013100\|Ga0157373_10950991	Not Available	639	Open in IMG/M
3300013102\|Ga0157371_10191587	Not Available	1464	Open in IMG/M
3300013102\|Ga0157371_10202440	Not Available	1423	Open in IMG/M
3300013102\|Ga0157371_10542328	Not Available	862	Open in IMG/M
3300013104\|Ga0157370_11449725	Not Available	617	Open in IMG/M
3300013105\|Ga0157369_10049446	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Phaeosphaeriaceae → Parastagonospora → Parastagonospora nodorum	4558	Open in IMG/M
3300013105\|Ga0157369_10170039	Not Available	2297	Open in IMG/M
3300013307\|Ga0157372_11117458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	912	Open in IMG/M
3300013871\|Ga0181466_1001102	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales	9169	Open in IMG/M
3300013873\|Ga0181464_1031083	Not Available	1010	Open in IMG/M
3300014325\|Ga0163163_11009428	Not Available	895	Open in IMG/M
3300015352\|Ga0182169_1018190	Not Available	1802	Open in IMG/M
3300017415\|Ga0182202_1001249	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	2059	Open in IMG/M
3300017415\|Ga0182202_1032903	Not Available	789	Open in IMG/M
3300017417\|Ga0182230_1073562	Not Available	613	Open in IMG/M
3300017430\|Ga0182192_1102396	Not Available	604	Open in IMG/M
3300017435\|Ga0182194_1000904	Not Available	3341	Open in IMG/M
3300017436\|Ga0182209_1165482	Not Available	510	Open in IMG/M
3300017680\|Ga0182233_1043586	Not Available	789	Open in IMG/M
3300017685\|Ga0182227_1066737	Not Available	659	Open in IMG/M
3300017694\|Ga0182211_1163735	Not Available	531	Open in IMG/M
3300019039\|Ga0193123_10012004	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales	2212	Open in IMG/M
3300020069\|Ga0197907_10271045	Not Available	697	Open in IMG/M
3300020070\|Ga0206356_10060530	Not Available	564	Open in IMG/M
3300020075\|Ga0206349_1614354	Not Available	1533	Open in IMG/M
3300020075\|Ga0206349_1850201	Not Available	616	Open in IMG/M
3300020076\|Ga0206355_1322183	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Phaeosphaeriaceae → Parastagonospora → Parastagonospora nodorum	1114	Open in IMG/M
3300021060\|Ga0182232_1004321	Not Available	2603	Open in IMG/M
3300021060\|Ga0182232_1009868	Not Available	1700	Open in IMG/M
3300022750\|Ga0247812_10295460	Not Available	590	Open in IMG/M
3300022918\|Ga0247814_10287128	Not Available	625	Open in IMG/M
3300022924\|Ga0247808_10060645	Not Available	1733	Open in IMG/M
3300025321\|Ga0207656_10175863	Not Available	1025	Open in IMG/M
3300025825\|Ga0210046_1032277	Not Available	2267	Open in IMG/M
3300025909\|Ga0207705_10861727	Not Available	702	Open in IMG/M
3300025949\|Ga0207667_11792119	Not Available	578	Open in IMG/M
3300025961\|Ga0207712_11947545	Not Available	526	Open in IMG/M
3300026041\|Ga0207639_10549596	Not Available	1060	Open in IMG/M
3300026067\|Ga0207678_10959346	Not Available	757	Open in IMG/M
3300026078\|Ga0207702_11045736	Not Available	810	Open in IMG/M
3300026095\|Ga0207676_10284037	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1504	Open in IMG/M
3300027775\|Ga0209177_10236142	Not Available	668	Open in IMG/M
3300028058\|Ga0268332_1003522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	1315	Open in IMG/M
3300028463\|Ga0268325_100966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	922	Open in IMG/M
3300028467\|Ga0268333_1000695	Not Available	1226	Open in IMG/M
3300028585\|Ga0265797_10100356	Not Available	2425	Open in IMG/M
3300028586\|Ga0265798_10072848	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Didymellaceae → Didymella → Didymella exigua	3341	Open in IMG/M
3300028588\|Ga0265780_10134156	Not Available	2425	Open in IMG/M
3300028588\|Ga0265780_10284923	Not Available	1496	Open in IMG/M
3300028794\|Ga0307515_10038006	Not Available	7718	Open in IMG/M
3300030768\|Ga0315877_113776	Not Available	819	Open in IMG/M
3300030792\|Ga0265790_112501	Not Available	638	Open in IMG/M
3300030796\|Ga0265789_125958	Not Available	558	Open in IMG/M
3300030828\|Ga0315869_111232	Not Available	949	Open in IMG/M
3300030890\|Ga0315875_137148	Not Available	508	Open in IMG/M
3300030894\|Ga0315884_116800	Not Available	717	Open in IMG/M
3300030929\|Ga0315852_108738	Not Available	813	Open in IMG/M
3300031109\|Ga0315824_110456	Not Available	651	Open in IMG/M
3300031412\|Ga0315848_114558	Not Available	580	Open in IMG/M
3300032080\|Ga0326721_10259991	Not Available	948	Open in IMG/M
3300032514\|Ga0214502_1223615	Not Available	720	Open in IMG/M
3300032589\|Ga0214500_1007945	Not Available	2311	Open in IMG/M
3300032593\|Ga0321338_1311666	Not Available	564	Open in IMG/M
3300032689\|Ga0214497_1077077	Not Available	736	Open in IMG/M
3300032699\|Ga0214494_1001373	Not Available	2812	Open in IMG/M
3300032791\|Ga0314748_1069442	Not Available	750	Open in IMG/M
3300032822\|Ga0314740_1000449	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales → Pleosporineae → Didymellaceae → Didymella → Didymella exigua	3241	Open in IMG/M
3300032889\|Ga0314751_1067481	Not Available	728	Open in IMG/M
3300032913\|Ga0314739_1028514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillales incertae sedis → Bacillales Family XI. Incertae Sedis → Gemella → unclassified Gemella → Gemella sp.	1040	Open in IMG/M
3300032913\|Ga0314739_1108971	Not Available	502	Open in IMG/M
3300033526\|Ga0314761_1023234	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → dothideomyceta → Dothideomycetes → Pleosporomycetidae → Pleosporales	1293	Open in IMG/M
3300033531\|Ga0314756_1052915	Not Available	715	Open in IMG/M
3300033532\|Ga0314767_1058425	Not Available	943	Open in IMG/M
3300033536\|Ga0314763_1044718	Not Available	695	Open in IMG/M
3300033536\|Ga0314763_1084455	Not Available	510	Open in IMG/M
3300033543\|Ga0314765_1093388	Not Available	940	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	64.22%
Environmental	Environmental	29.36%
Engineered	Engineered	6.42%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	64.22%
Terrestrial	Environmental → Terrestrial	26.61%
Built Environment	Engineered → Built Environment	6.42%
Aquatic	Environmental → Aquatic	2.75%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	29.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.60%
Plant Litter	Environmental → Terrestrial → Plant Litter	14.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.84%
Soil	Environmental → Terrestrial → Soil	11.93%
Solar Panel	Engineered → Built Environment → Solar Panel	4.59%
Rhizome	Host-Associated → Plants → Rhizome	2.75%
Freshwater	Environmental → Aquatic → Freshwater	1.83%
Roots	Host-Associated → Plants → Roots	1.83%
Phylloplane	Host-Associated → Plants → Phylloplane	1.83%
Unclassified	Engineered → Built Environment → Unclassified	1.83%
Marine	Environmental → Aquatic → Marine	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	28.44%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	14.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	11.01%
Unclassified	Engineered → Built Environment → Solar Panel → Unclassified	4.59%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified	2.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.83%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.92%
Loam	Environmental → Terrestrial → Soil → Loam	0.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.92%
Carposphere	Host-Associated → Plants → Phyllosphere → Carposphere	0.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	28.44%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	14.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.34%
Unclassified	Engineered → Built Environment → Solar Panel → Unclassified → Unclassified	4.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.67%
Unclassified	Host-Associated → Plants → Rhizome → Unclassified → Unclassified	2.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.83%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.83%
Unclassified	Engineered → Built Environment → Unclassified → Unclassified → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.92%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.92%
Unclassified	Host-Associated → Plants → Phyllosphere → Carposphere → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	17.43%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	14.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	8.26%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.34%
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	6.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	4.59%
Solar Cell Surface	Engineered → Built Environment → Solar Panel → Unclassified → Unclassified → Solar Cell Surface	4.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.75%
Sugarcane Root And Bulk Soil	Host-Associated → Plants → Rhizome → Unclassified → Unclassified → Sugarcane Root And Bulk Soil	2.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.75%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	2.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	1.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.83%
Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere	1.83%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.83%
Clean Room	Engineered → Built Environment → Unclassified → Unclassified → Unclassified → Clean Room	1.83%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.92%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.92%
Fruit	Host-Associated → Plants → Phyllosphere → Carposphere → Unclassified → Fruit	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003316	Sugarcane root Sample L1	Host-Associated	Open in IMG/M
3300003322	Sugarcane root Sample L2	Host-Associated	Open in IMG/M
3300003845	Agave microbial communities from Guanajuato, Mexico - At.P.e	Host-Associated	Open in IMG/M
3300004186	Groundwater microbial communities from aquifer - Crystal Geyser CG18_big_fil_WC_8/21/14_2.50	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005661	Agave microbial communities from Guanajuato, Mexico - As.Sf.e	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007218	Pinova apple microbial communities from Italy	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012480	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.yng.040610	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012888	Solar panel surface microbial communities from Lawrence Berkeley National Laboratory, California, USA - R	Engineered	Open in IMG/M
3300012890	Solar panel surface microbial communities from Lawrence Berkeley National Laboratory, California, USA - M	Engineered	Open in IMG/M
3300012894	Solar panel surface microbial communities from Lawrence Berkeley National Laboratory, California, USA - L	Engineered	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013871	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In4-11 gowning area SPAdes reassembly	Engineered	Open in IMG/M
3300013873	Clean room microbial communities from NASA Spacecraft Assembly Facility at Jet Propulsion Laboratory, Pasadena, California, USA - InSight In2-11 gowning area SPAdes reassembly	Engineered	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015352	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017417	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017435	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017694	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300019039	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_011 - TARA_X000001286 (ERX1782333-ERR1712137)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300021060	Phyllosphere microbial comminities from miscanthus, Michigan, USA - G6R3_NF_07NOV2016_LD2 MG	Host-Associated	Open in IMG/M
3300022750	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L149-409B-1	Environmental	Open in IMG/M
3300022918	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L179-409R-1	Environmental	Open in IMG/M
3300022924	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L089-202R-1	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025825	Groundwater microbial communities from aquifer - Crystal Geyser CG18_big_fil_WC_8/21/14_2.50 (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028058	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028463	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_17JUL2017_LD1	Host-Associated	Open in IMG/M
3300028467	Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_07AUG2017_LD1	Host-Associated	Open in IMG/M
3300028585	Plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T30	Environmental	Open in IMG/M
3300028586	Plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T30	Environmental	Open in IMG/M
3300028588	Plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T30	Environmental	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300030768	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030792	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030796	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P1 T3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030828	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T27 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030890	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T29 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030894	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030929	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P3 T21 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031109	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031412	Metatranscriptome of plant litter microbial communities from East Loma Ridge, Irvine, California - P2 T20 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032514	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12SEP2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032589	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032593	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032689	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032699	Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032791	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032822	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032889	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300032913	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033526	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033531	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033532	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033536	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_18SEP2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300033543	Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_18SEP2017_LR1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
rootH1_100472531	3300003316	Sugarcane Root And Bulk Soil	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIAIVALEYKTDLSRLSVMELDKSKKINDVINT*
rootH1_101092292	3300003316	Sugarcane Root And Bulk Soil	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIAIVALEYTDLSRLSVMELDKSKKINDVINT*
rootL2_101934041	3300003322	Sugarcane Root And Bulk Soil	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIAIVTLEYKTDLSRLSVMELDKSKKINDVINT*
Ga0058699_10125581	3300003845	Agave	KIWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT*
Ga0066647_100295445	3300004186	Groundwater	LVVAVVLNRPPKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLNVIELDKSKKINEVITM*
Ga0070658_115085911	3300005327	Corn Rhizosphere	LVKIATSDIKTWKGSVVAVVVNRPEKIPIPLFKNRKNKLSYAIKQEISKIVIVALEYKIDLSRLNVMELDKSKNINEVITM*
Ga0070714_1002966652	3300005435	Agricultural Soil	MVYPLLVKIATSDIKTWKGSVVAVVVNRPEKIPIPLFKNRKNKLSYAIKQEISKIVIVALEYKIDLSRLNVMELDKSKNINEVITM*
Ga0068867_1014787541	3300005459	Miscanthus Rhizosphere	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT*
Ga0068853_1020576891	3300005539	Corn Rhizosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT*
Ga0068855_1003452283	3300005563	Corn Rhizosphere	VAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINDIINT*
Ga0068852_1016947681	3300005616	Corn Rhizosphere	PLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT*
Ga0068864_1006196291	3300005618	Switchgrass Rhizosphere	VAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT*
Ga0058698_107799771	3300005661	Agave	VAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT*
Ga0068851_103385912	3300005834	Corn Rhizosphere	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINGLINT*
Ga0068858_1021807171	3300005842	Switchgrass Rhizosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVIST*
Ga0079222_100877581	3300006755	Agricultural Soil	VTVVLKRPEKITVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINDIINT*
Ga0079220_102671191	3300006806	Agricultural Soil	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINDIINT*
Ga0079219_102573572	3300006954	Agricultural Soil	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT*
Ga0103964_10548211	3300007218	Fruit	VAVVLKRPEKIPIPLFKXXXXXXXXXXXXIVALEYKIDLSRLSVMELDKSKKINDVINT*
Ga0105244_103717981	3300009036	Miscanthus Rhizosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINDIINT*
Ga0105249_109248681	3300009553	Switchgrass Rhizosphere	MWKTFVVAVVLKRPEKIPIPLFKNRKNKSSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINDIINT*
Ga0105239_100293689	3300010375	Corn Rhizosphere	VKRPEKIPIPLFKNKKNRLSYAIKQEISKIVIVTLEYKIDLSRLNVIELDKSKKINEVIII*
Ga0105239_109228212	3300010375	Corn Rhizosphere	VAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIEL
Ga0134024_13607792	3300012404	Grasslands Soil	LVVAVVLNRPPKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLNVIELD
Ga0157346_10048811	3300012480	Arabidopsis Rhizosphere	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINDIINT*
Ga0157342_10752932	3300012507	Arabidopsis Rhizosphere	MWKTFVVAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT*
Ga0160429_10711793	3300012888	Solar Cell Surface	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSK
Ga0160429_11081921	3300012888	Solar Cell Surface	VAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMIN
Ga0160429_11835933	3300012888	Solar Cell Surface	VVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT*
Ga0160428_12815961	3300012890	Solar Cell Surface	KRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVINT
Ga0160427_100654814	3300012894	Solar Cell Surface	VLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVINT*
Ga0164308_108952152	3300012985	Soil	SDIKTWKGSVVAVVVNRPEKIPIPLFKNRKNKLSYAIKQEISKIVIVALEYKIDLSRLNVMELDKSKNINEVITM*
Ga0157373_104042291	3300013100	Corn Rhizosphere	VAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINDIINT*
Ga0157373_109509913	3300013100	Corn Rhizosphere	WKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT*
Ga0157371_101915873	3300013102	Corn Rhizosphere	VVKRPEKIPIPLFKNKKNRLSYVIKQEISKIVISTLEYKIDLSRLNVIELDKSKKINEVIIT*
Ga0157371_102024401	3300013102	Corn Rhizosphere	VVKRPEKIPIPLFKNKKNRLSYAIKQEISKIVIVTLEYKIDLSRLNVIELDKSKKINEVIII*
Ga0157371_105423281	3300013102	Corn Rhizosphere	TRKIKIWKTFVVAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIEFDKSKNINDVIST*
Ga0157370_114497251	3300013104	Corn Rhizosphere	VAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINDIINT*
Ga0157369_100494462	3300013105	Corn Rhizosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIEFDKSKNINDVIST*
Ga0157369_101700395	3300013105	Corn Rhizosphere	ITLLIKKIKIKTVVFTVVVKRPEKIPIPLFKNKKNRLSYVIKQEISKIVISTLEYKIDLSRLNVIELDKSKKINEVIIT
Ga0157372_111174582	3300013307	Corn Rhizosphere	PEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINDIINT*
Ga0181466_100110215	3300013871	Clean Room	VAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIMALEHNIDLSRLSVIELDKSKMINGLINT*
Ga0181464_10310832	3300013873	Clean Room	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELD
Ga0163163_110094282	3300014325	Switchgrass Rhizosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLNVTELDNSKKINEVINTSE*
Ga0182169_10181902	3300015352	Switchgrass Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVIIT*
Ga0182202_10012493	3300017415	Miscanthus Phyllosphere	VPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT
Ga0182202_10329032	3300017415	Miscanthus Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIAIVALEYKIDLSRLNVTELDNSKKINEVINTSE
Ga0182230_10735621	3300017417	Miscanthus Phyllosphere	ITLLTRKIKIWKTFVVAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT
Ga0182192_11023961	3300017430	Miscanthus Phyllosphere	ITLLTRKIKIWKTFVVAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT
Ga0182194_10009043	3300017435	Switchgrass Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINDIINT
Ga0182209_11654821	3300017436	Miscanthus Phyllosphere	NSSITLLTRKIKIWKTFVVAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVMELDKSKKINDVINT
Ga0182233_10435861	3300017680	Miscanthus Phyllosphere	VPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINDIINT
Ga0182227_10667371	3300017685	Miscanthus Phyllosphere	PEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINDIINT
Ga0182211_11637352	3300017694	Switchgrass Phyllosphere	XKLGKIQNVAIXLLTRKIKIWKTTVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT
Ga0193123_100120041	3300019039	Marine	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINTPC
Ga0197907_102710451	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIE
Ga0206356_100605301	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKI
Ga0206349_16143542	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	VVKRPEKIPIPLFKNKKNRLSYAIKQEISKIVIVTLEYKIDLSRLNVIELDKSKKINEVIIT
Ga0206349_18502012	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIEFDKSKNINDVIST
Ga0206355_13221832	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	VVKRPEKIPIPLFKNKKNRLSYVIKQEISKIVISTLEYKIDLSRLNVIELDKSKKINEVIIT
Ga0182232_10043212	3300021060	Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT
Ga0182232_10098682	3300021060	Phyllosphere	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINDIINT
Ga0247812_102954601	3300022750	Plant Litter	VALNKPEKIPIPVFKKKKYKLSYVIKVEITKIEIVALEYNIDLSRLSVIEFDNSSIINDNVNI
Ga0247814_102871281	3300022918	Plant Litter	SSITLLTRKIKIWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINDIINT
Ga0247808_100606452	3300022924	Plant Litter	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINDIINT
Ga0207656_101758633	3300025321	Corn Rhizosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINGLINT
Ga0210046_10322772	3300025825	Groundwater	LVVAVVLNRPPKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLNVIELDKSKKINEVITM
Ga0207705_108617271	3300025909	Corn Rhizosphere	MVYPLLVKIATSDIKTWKGSVVAVVVNRPEKIPIPLFKNRKNKLSYAIKQEISKIVIVALEYKIDLSRLNVMELDKSKNINEVITM
Ga0207667_117921191	3300025949	Corn Rhizosphere	VAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINDIINT
Ga0207712_119475451	3300025961	Switchgrass Rhizosphere	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT
Ga0207639_105495961	3300026041	Corn Rhizosphere	TRKIKMWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT
Ga0207678_109593461	3300026067	Corn Rhizosphere	VVKRPEKIPIPLFKNKKNRLSYVIKQEISKIVIVALEYKIDLSRLSVMELDKSKKINDVINT
Ga0207702_110457361	3300026078	Corn Rhizosphere	ITVPLFKNRQNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT
Ga0207676_102840372	3300026095	Switchgrass Rhizosphere	VAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT
Ga0209177_102361421	3300027775	Agricultural Soil	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINDI
Ga0268332_10035222	3300028058	Phyllosphere	NAVNSSITLLTRKIKIWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVIST
Ga0268325_1009661	3300028463	Phyllosphere	KRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVIST
Ga0268333_10006953	3300028467	Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKI
Ga0265797_101003563	3300028585	Plant Litter	VAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINDIINT
Ga0265798_100728484	3300028586	Plant Litter	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVINT
Ga0265780_101341561	3300028588	Plant Litter	VAVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELD
Ga0265780_102849231	3300028588	Plant Litter	KIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVINT
Ga0307515_100380061	3300028794	Ectomycorrhiza	KLPNIPIPLFKNKRYKLSYVTKLAISKIVIVALEYKIDLSRLKVVELDNNNKINDVVNINKKEY
Ga0315877_1137761	3300030768	Plant Litter	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKK
Ga0265790_1125012	3300030792	Plant Litter	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKS
Ga0265789_1259581	3300030796	Plant Litter	LLTRKIKIWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMINGLINT
Ga0315869_1112321	3300030828	Plant Litter	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKI
Ga0315875_1371481	3300030890	Plant Litter	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDK
Ga0315884_1168001	3300030894	Plant Litter	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKM
Ga0315852_1087382	3300030929	Plant Litter	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKIN
Ga0315824_1104561	3300031109	Plant Litter	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMIN
Ga0315848_1145581	3300031412	Plant Litter	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKMIN
Ga0326721_102599911	3300032080	Soil	VAVVLNRPPKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKNINDVIST
Ga0214502_12236151	3300032514	Switchgrass Phyllosphere	VAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIE
Ga0214500_10079452	3300032589	Switchgrass Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVIST
Ga0321338_13116661	3300032593	Switchgrass Phyllosphere	VAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMIN
Ga0214497_10770771	3300032689	Switchgrass Phyllosphere	MWKTFVVAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIMALEHNIDLSRLSVIELDKSKMINGLINT
Ga0214494_10013736	3300032699	Switchgrass Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLNVTELDNSKKINEVINTSE
Ga0314748_10694421	3300032791	Switchgrass Phyllosphere	VAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT
Ga0314740_10004495	3300032822	Switchgrass Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVMELDKSKKIN
Ga0314751_10674811	3300032889	Switchgrass Phyllosphere	VAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIMALEHNIDLSRLSVIELDKSKMINGLINT
Ga0314739_10285141	3300032913	Switchgrass Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVIIT
Ga0314739_11089712	3300032913	Switchgrass Phyllosphere	MDVTWNRPLKIPTPLLKNKRFKLSYEMRALIIKIVIVALEYRIDLSRLNVSELDKINIIS
Ga0314761_10232342	3300033526	Switchgrass Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEYKIDLSRLSVIELDKSKKINDVISTQK
Ga0314756_10529152	3300033531	Switchgrass Phyllosphere	VTVVLKGPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINDIINT
Ga0314767_10584252	3300033532	Switchgrass Phyllosphere	VTVVLKRPEKITVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDK
Ga0314763_10447181	3300033536	Switchgrass Phyllosphere	VAVVLKRPEKIPVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIEL
Ga0314763_10844551	3300033536	Switchgrass Phyllosphere	VAVVLKRPEKIPIPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT
Ga0314765_10933881	3300033543	Switchgrass Phyllosphere	VTVVLKRPEKITVPLFKNRKNKLSYAIKAEISKIVIVALEHNIDLSRLSVIELDKSKMINGLINT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F088701

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences