NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F086518

Metagenome / Metatranscriptome Family F086518

Go to section:
Overview Alignments Structure & Topology Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F086518
Family Type Metagenome / Metatranscriptome
Number of Sequences 110
Average Sequence Length 111 residues
Representative Sequence VDGCRELNKVRAIYKPRKPPVEGEAEPPRKRARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFV
Number of Associated Samples 86
Number of Associated Scaffolds 110

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 85.19 %
% of genes near scaffold ends (potentially truncated) 80.00 %
% of genes from short scaffolds (< 2000 bps) 91.82 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (99.091 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(66.364 % of family members)
Environment Ontology (ENVO) Unclassified
(91.818 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(58.182 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 33.81%    β-sheet: 0.00%    Coil/Unstructured: 66.19%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A99.09 %
All OrganismsrootAll Organisms0.91 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005618|Ga0068864_102179720Not Available560Open in IMG/M
3300005719|Ga0068861_100372869Not Available1258Open in IMG/M
3300005719|Ga0068861_101904459Not Available591Open in IMG/M
3300009101|Ga0105247_11584099Not Available537Open in IMG/M
3300009971|Ga0105127_11159Not Available676Open in IMG/M
3300009972|Ga0105137_110840Not Available504Open in IMG/M
3300009978|Ga0105148_107273Not Available820Open in IMG/M
3300009988|Ga0105035_104528Not Available1104Open in IMG/M
3300009988|Ga0105035_124862Not Available576Open in IMG/M
3300009995|Ga0105139_1050623Not Available730Open in IMG/M
3300009995|Ga0105139_1119420Not Available511Open in IMG/M
3300010271|Ga0134095_1088073Not Available501Open in IMG/M
3300010371|Ga0134125_13052491Not Available507Open in IMG/M
3300013306|Ga0163162_10630928Not Available1196Open in IMG/M
3300014968|Ga0157379_10552592Not Available1071Open in IMG/M
3300015270|Ga0182183_1028921Not Available728Open in IMG/M
3300015270|Ga0182183_1046283Not Available633Open in IMG/M
3300015273|Ga0182102_1026720Not Available588Open in IMG/M
3300015280|Ga0182100_1008858Not Available1066Open in IMG/M
3300015280|Ga0182100_1069684Not Available571Open in IMG/M
3300015315|Ga0182120_1106799Not Available559Open in IMG/M
3300015316|Ga0182121_1064079Not Available699Open in IMG/M
3300015316|Ga0182121_1069602Not Available678Open in IMG/M
3300015318|Ga0182181_1073697Not Available589Open in IMG/M
3300015319|Ga0182130_1040153Not Available776Open in IMG/M
3300015325|Ga0182148_1063050Not Available688Open in IMG/M
3300015325|Ga0182148_1129573Not Available527Open in IMG/M
3300015326|Ga0182166_1007833Not Available1271Open in IMG/M
3300015326|Ga0182166_1126459Not Available531Open in IMG/M
3300015327|Ga0182114_1134135Not Available545Open in IMG/M
3300015328|Ga0182153_1110040Not Available573Open in IMG/M
3300015328|Ga0182153_1114347Not Available565Open in IMG/M
3300015332|Ga0182117_1150218Not Available530Open in IMG/M
3300015336|Ga0182150_1093513Not Available634Open in IMG/M
3300015338|Ga0182137_1150132Not Available543Open in IMG/M
3300015340|Ga0182133_1147983Not Available564Open in IMG/M
3300015345|Ga0182111_1127378Not Available648Open in IMG/M
3300015348|Ga0182115_1207750Not Available627Open in IMG/M
3300015348|Ga0182115_1300870Not Available506Open in IMG/M
3300015349|Ga0182185_1135683Not Available727Open in IMG/M
3300015353|Ga0182179_1196507Not Available641Open in IMG/M
3300015353|Ga0182179_1296599Not Available525Open in IMG/M
3300015354|Ga0182167_1236843Not Available661Open in IMG/M
3300017408|Ga0182197_1151124Not Available503Open in IMG/M
3300017412|Ga0182199_1101426Not Available662Open in IMG/M
3300017412|Ga0182199_1138375Not Available587Open in IMG/M
3300017432|Ga0182196_1083492Not Available626Open in IMG/M
3300017432|Ga0182196_1101781Not Available585Open in IMG/M
3300017439|Ga0182200_1091180Not Available619Open in IMG/M
3300017447|Ga0182215_1132667Not Available569Open in IMG/M
3300017691|Ga0182212_1031872Not Available1137Open in IMG/M
3300017693|Ga0182216_1221695Not Available504Open in IMG/M
3300025517|Ga0207869_1004571Not Available4032Open in IMG/M
3300025922|Ga0207646_10837382Not Available818Open in IMG/M
3300028049|Ga0268322_1009280Not Available883Open in IMG/M
3300028054|Ga0268306_1024305Not Available568Open in IMG/M
3300028055|Ga0268338_1002567Not Available1135Open in IMG/M
3300028056|Ga0268330_1051996Not Available538Open in IMG/M
3300028056|Ga0268330_1062366Not Available503Open in IMG/M
3300028057|Ga0268352_1006726Not Available1103Open in IMG/M
3300028058|Ga0268332_1072663Not Available519Open in IMG/M
3300028062|Ga0268342_1015342Not Available718Open in IMG/M
3300028062|Ga0268342_1033067Not Available559Open in IMG/M
3300028062|Ga0268342_1043529Not Available508Open in IMG/M
3300028140|Ga0268334_1017212Not Available524Open in IMG/M
3300028153|Ga0268320_1008997Not Available716Open in IMG/M
3300028381|Ga0268264_10513521Not Available1170Open in IMG/M
3300028463|Ga0268325_101473Not Available770Open in IMG/M
3300028468|Ga0268317_1002937Not Available776Open in IMG/M
3300028472|Ga0268315_1028163Not Available501Open in IMG/M
3300028474|Ga0268331_1024916Not Available525Open in IMG/M
3300028527|Ga0268335_1018408Not Available507Open in IMG/M
3300028529|Ga0268311_1017922Not Available591Open in IMG/M
3300032464|Ga0214492_1095452Not Available556Open in IMG/M
3300032467|Ga0214488_1081312Not Available713Open in IMG/M
3300032467|Ga0214488_1122582Not Available551Open in IMG/M
3300032467|Ga0214488_1141114Not Available501Open in IMG/M
3300032490|Ga0214495_1155085Not Available504Open in IMG/M
3300032502|Ga0214490_1155197Not Available516Open in IMG/M
3300032502|Ga0214490_1156086Not Available514Open in IMG/M
3300032548|Ga0214483_1003013Not Available2068Open in IMG/M
3300032548|Ga0214483_1055856Not Available662Open in IMG/M
3300032589|Ga0214500_1183554Not Available594Open in IMG/M
3300032590|Ga0214489_1058520Not Available572Open in IMG/M
3300032591|Ga0214484_1009067Not Available1727Open in IMG/M
3300032593|Ga0321338_1005130Not Available2977Open in IMG/M
3300032689|Ga0214497_1087729Not Available682Open in IMG/M
3300032689|Ga0214497_1116915Not Available569Open in IMG/M
3300032689|Ga0214497_1130094Not Available529Open in IMG/M
3300032698|Ga0214485_1073346Not Available654Open in IMG/M
3300032699|Ga0214494_1024120Not Available1128Open in IMG/M
3300032757|Ga0314753_1000994Not Available3180Open in IMG/M
3300032757|Ga0314753_1052688Not Available735Open in IMG/M
3300032758|Ga0314746_1124364Not Available584Open in IMG/M
3300032761|Ga0314733_1027795Not Available1053Open in IMG/M
3300032790|Ga0314731_1085569Not Available506Open in IMG/M
3300032824|Ga0314735_1023678Not Available1117Open in IMG/M
3300032844|Ga0314743_1111636Not Available622Open in IMG/M
3300032890|Ga0314747_1003637Not Available1949Open in IMG/M
3300032915|Ga0314749_1001538Not Available3017Open in IMG/M
3300032917|Ga0314721_115226Not Available821Open in IMG/M
3300032959|Ga0314738_1056308Not Available713Open in IMG/M
3300032976|Ga0314752_1046143Not Available835Open in IMG/M
3300033523|Ga0314768_1076004Not Available1149Open in IMG/M
3300033525|Ga0314758_1172336Not Available590Open in IMG/M
3300033534|Ga0314757_1002087Not Available3291Open in IMG/M
3300033535|Ga0314759_1004893All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii2749Open in IMG/M
3300033539|Ga0314762_1111828Not Available504Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere66.36%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere16.36%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated4.55%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.73%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.91%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.91%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.91%
Miscanthus PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere0.91%
Ionic Liquid And High Solid EnrichedEngineered → Lab Enrichment → Defined Media → Unclassified → Unclassified → Ionic Liquid And High Solid Enriched0.91%
Switchgrass DegradingEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Switchgrass Degrading0.91%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009971Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_174 metaGHost-AssociatedOpen in IMG/M
3300009972Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_224 metaGHost-AssociatedOpen in IMG/M
3300009978Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaGHost-AssociatedOpen in IMG/M
3300009988Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaGHost-AssociatedOpen in IMG/M
3300009995Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaGHost-AssociatedOpen in IMG/M
3300010271Switchgrass degrading microbial communities from high solid loading bioreactors in New Hampshire, USA - 6_20_20_110_A2 metaGEngineeredOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015270Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015273Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015315Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015318Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015319Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015325Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015326Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015327Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015328Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015332Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015340Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015345Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015353Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015354Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017408Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017412Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017432Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017439Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017447Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017691Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017693Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300025517Ionic liquid and high solid enriched microbial communities from the Joint BioEnergy Institute, USA - AR20-5-D (SPAdes)EngineeredOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028049Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028054Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_15MAY2017_LD1Host-AssociatedOpen in IMG/M
3300028055Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028056Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028057Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_18SEP2017_LD1Host-AssociatedOpen in IMG/M
3300028058Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028062Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028140Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028153Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028463Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028468Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_26JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028472Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028474Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028527Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028529Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300032464Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032467Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_NF_31MAY2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032490Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032502Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032548Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032589Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032590Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_31MAY2016_LR3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032591Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032593Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12SEP2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032689Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_12JUL2016_LR2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032698Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_31MAY2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032699Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032757Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032758Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032761Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032790Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032824Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032844Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_17JUL2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032890Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032915Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032917Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_15MAY2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032959Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032976Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_07AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033523Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033525Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033534Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033535Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033539Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068864_10217972013300005618Switchgrass RhizosphereVDGCPELNKVRAIYKPRKPPVEGEADPPQKRARLAGPMGLGRPAYPLLGSPRSHFSRVDSSHLLEFMSFTIAPLWMSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLI
Ga0068861_10037286923300005719Switchgrass RhizosphereVDGCLELNKVGAIYKPRKPPVEGEAEPPQKRSGPAGPMGLGRPAYPFSGSPRSHLWRVDSSHLLEFLSFTIAPLWTLLSWRYLRGKDRIGNPSL
Ga0068861_10190445913300005719Switchgrass RhizosphereVDGCSELNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHFSRADSSHLLEFMSFTIAPLLTLLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVG
Ga0105247_1158409913300009101Switchgrass RhizosphereVDGCFELNKVRAIYKPRKPPVEGEAEPPHKWATPAGPLGLGRLAYPLSVSPRSPLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWAL
Ga0105127_1115913300009971Switchgrass AssociatedVDGCYELNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHLFRVDSSRLLEFLSFTIAPLWALLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFMGLVLWALLEDGCP*
Ga0105137_11084013300009972Switchgrass AssociatedVDGCCELNKVRAIYKPGKPLIEGEAEPPQKRARPAGPMGLGQPAYPLSGPTRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFV
Ga0105148_10727313300009978Switchgrass AssociatedVDGCLEMNKVRAIYKPRKPLVEGEAEPPQKRARPAGPMGLGRPAYTVLGSPRSHLSRVDSSHLLEFMSFTIAPLWMSLSSRYLRGKDRIGKSFLKSSFALLNPEVS*
Ga0105035_10452813300009988Switchgrass RhizosphereVRAIYKPRKPPVEGVAQPPLKWARPAGLMGLGWPAYPLSVLPRSPLSRVDSSHLLEFMSFTIAPLWTSLSWRYLQRKDRIGNPSLNLYLLCLIPKYLDLIFVGLVLWALLEEWASNQHGLWSFLWALAFVFLRVGARSR
Ga0105035_12486213300009988Switchgrass RhizosphereVDGCRELNKVRAIYEPRKPPVEGEAEPPRKRARPAGPIGLGRPAYPLSGSPRSHLSRADSSHLLEFMSFTIAPLWTPLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVPWALLEDGCA
Ga0105139_105062323300009995Switchgrass AssociatedVDGCSELNKVRAIYEPRKPPVEGEAELPRKRARPAAYPLSDSPQSHLSRVDSSHLLEFMSFTIAPLWSSLSWRYFRGKDRIGNPFLNLHLLCLIPKYLDLIFVGLDLWALLEDGCG*
Ga0105139_111942013300009995Switchgrass AssociatedVRAIYKPRKPPVEGEAEPPRKQARPAGLMGLGQPAYPLSGPPRSPRSHVDSSHLLEVMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVG
Ga0134095_108807313300010271Switchgrass DegradingGEAEPPRKRARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGSVLWALLEDGCA*
Ga0134125_1305249113300010371Terrestrial SoilVRAIYKPRKPPVKGEAEPPQKRARPASPMGLGRLAYPLSGSPRSHLLRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLI
Ga0163162_1063092813300013306Switchgrass RhizosphereVDGCFELYKVQAIYKQRKPPVEGEGKPPQKRAGPAGPMGLGRPAYPFSGSPRSHFWRVDSSHLLEFLSFTIAPLWTLLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVL
Ga0157379_1055259213300014968Switchgrass RhizosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLI
Ga0182183_102892113300015270Switchgrass PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFV
Ga0182183_104628313300015270Switchgrass PhyllosphereVDGCSELNKVRAIYKPRKPPVEREAELPRKRARPAGPMGLGLLAYPLSGSPRSHLSFVDSSHLLEFISFTIAPLWTSLSWRYLRGKDRIGNSSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA*
Ga0182102_102672013300015273Switchgrass PhyllosphereVDGCPELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFV
Ga0182100_100885813300015280Switchgrass PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIP
Ga0182100_106968413300015280Switchgrass PhyllosphereVDGYCELNKVRAIYEPRKPPVEGEDEPPRKRARPASPIGIGRPAYPRSGSPRSHLSRVDSSHLLEFMSVTIAPLWTSLSWRYLRGKDRIGNPSLNLYLLCLIPKYL
Ga0182120_110679913300015315Switchgrass PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIF
Ga0182121_106407923300015316Switchgrass PhyllosphereYKPRKPPVEGEAEPPRKQARPAGPMGLGWPAYPLSGSPRSHLSHVDSSHLLEFMSFTIAPLWTSLSCRYLRGKDRIGNPSLNLHLLCLISKYLDLIFVGLVLWALLEDGCA*
Ga0182121_106960213300015316Switchgrass PhyllosphereVDGCFELNKVRAIYKPRKPPVEGEAETPRKRARPAGLMGQGRPASPLSGPPRSHLSRVDSWHLLEFMSFTIAPLWTLLSWRYPRGKDMIGNPSLNLHLLCLIPKYLDLIFVGL
Ga0182181_107369713300015318Switchgrass PhyllosphereVDSPSELNKVRAIYKPRKPPVEGEAKPPRKRAGPAGPMGLGRPAYPLSGSPRSHLLRVDSSHLLEFMSFTIVPLWTSLSWRYLRGKDRIGNPSLNLYLLCLIPKYL
Ga0182130_104015313300015319Switchgrass PhyllosphereVDGYPELNKVQAIYKPRKPPVEGEAKPPRKWARPAGLMGLGQPAYPLSGPPRSPLSRVDSSNLLEFMSFTIAPLWTSLSWRYLRGKDRIGNYSLNLHLLCLIPKYLDLIFMGLVVWALLEDGCA*
Ga0182148_106305013300015325Switchgrass PhyllosphereMNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHLSRVDSSHLLEFMSFTIAPLWMSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA*
Ga0182148_112957313300015325Switchgrass PhyllosphereVDSISELNKVRAIYKPRKPPVEGEAKPTRKRAGPAGPMGLGRPAYPFSGSPRSHLSRVDSSHLLEFLSFTIAPLWTLLSWRYIRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLE
Ga0182166_100783313300015326Switchgrass PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAEPPQKRSGPAGPMGLGRPAYPFSGSPRSHLWHVDSSHLLEFLSFTIAPLWTLLSWRYLRGKDRIGNPSLNLH
Ga0182166_112645913300015326Switchgrass PhyllosphereMNKVRAIYKPRKPTVEGEAELPQKRARPAGPMGLNWPAYPLLGSPWSHLSCVDSSHLLEFMSFTIAPLWMSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIF
Ga0182114_113413523300015327Switchgrass PhyllosphereMNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPQSHLLRVESSHLLEFMSFTIAPLWSSLSWRYFRGKDRIGNPFLNLHLLCLILKYLDLIFVGLVLWALLE
Ga0182153_111004013300015328Switchgrass PhyllosphereVRAIYKPRKPPVEGEAEPPRKRARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCL
Ga0182153_111434713300015328Switchgrass PhyllosphereVRAIYKPRKPLDEGEAEPPRKRARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLEFMSFMIAPLWTSLSWRYLRGKDRIGNSSLNLHLLCLIPKYLDLIFVGLVLWALLE
Ga0182117_115021813300015332Switchgrass PhyllosphereMVQSIYKSRKPPVEGEAEPPRKWSRPAGLMGLGRPAYPLSGPPRSPLSRVDSSHLLEFMSFTIAPLWTSLSWRYPRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGC
Ga0182150_109351313300015336Switchgrass PhyllosphereVRAIYKPRKPLVKGEAETPQKQARPAGLMGLRRPAYPLSGPPRSPLSRVDSSHLLGFMFFTIAPLWTLLSWRYLRGKDRIGNPSLNLHFLCLIPKYLDLIFVGLVLWALLEDG
Ga0182137_115013213300015338Switchgrass PhyllosphereVDGCPELNKVRAIYKPRKPPVEGEAEPPQKWARPAGPMGLGRPAYPLSGSPQSHFSRADSSHLLEFMSFTIAPLLTSLSWRYLRGKDRIGNPSLNLYLLCLIPKYLDLI
Ga0182133_114798313300015340Switchgrass PhyllosphereRELNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHLSRVDSSHLLEFMSFTIAPLWISLSWRYLRGKDRIGNHSLNLHFLCLIPKYLYLIFVGSVLWALLEDGCA
Ga0182111_112737813300015345Miscanthus PhyllosphereKPRKPPVEGEAKPPRKRAGPGGPMGLGRPAYPVSGSPRSHFLRADSSHLLEFMSFTIAPLLTSLSWRYLRGKDRIGNPSLNLHLLCLILKYLDLIFVGLVLWALLEDGCA*
Ga0182115_120775013300015348Switchgrass PhyllosphereVDGCPKLNKVRAIYKPMKPPVEGEAEPPRKRARPAGHMGLGRPAYPFSGLPRSHLSRVDSSHLLEFMSFTIAPLWMSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLTFVGLFLWALLENGC
Ga0182115_130087013300015348Switchgrass PhyllosphereVDGCLELNKVRAIYKPRKPPVEGEAKRPQKRSGPAGPMGLGRPAYPVSGSPRSHFSHADSSHLLEFMSFTIAPLLTSLSWRYLRGKDRIGNPSLNLHLLC
Ga0182185_113568313300015349Switchgrass PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLI
Ga0182179_119650713300015353Switchgrass PhyllosphereVDGCSELNKVRAIYKPRKPPVEGEAKPPQKRARPAGPMGLGRPAYPLSGSPRSHFSRADSSHLLEFMSFTIVPLLTSLSWRYLRGKDRIGNPSLN
Ga0182179_129659913300015353Switchgrass PhyllosphereVDGCLELNNVRAIYKPRKTPVEGEAEPPQKRAMPAGPMGLGRPAYPLSGSPRSPLSCVDSSHLLEFLSFMIAPLWTLLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0182167_123684313300015354Switchgrass PhyllosphereMNKVRAIYKPRKPLVEGEAEPPQKRARPAGPMGLGRPVYPLLGSPRSHLSRADSSHLLEFMSFTIAPLLTSLSWRYLRGKDRIGNPSLN
Ga0182197_115112413300017408Switchgrass PhyllosphereVDGCRELNKVQAIYEPRKPPVEGEAEPPRKRARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFV
Ga0182199_110142613300017412Switchgrass PhyllosphereVRAIYKLRKPPVEGEAEPPQKQARPAGPMGLGRLAYPLSGSPRSHLLRVNSSHLLELMSFTILPLWTSLSWRYLRGKDRIGNPSLNLHLL
Ga0182199_113837513300017412Switchgrass PhyllosphereVDGCPELNKVRAINEPRKPPVEGEAEPPQKQARPAGLMGLGRPAYPLLGPPQSHLSRVDSLHLLEFMSFMIAPLWTSLSWRYPQGNDRIGNPSLNLHLLCLIPKYLDLFFVGLV
Ga0182196_108349213300017432Switchgrass PhyllosphereVRAIYKSRKPPIEGEAEPPQKWARPAGLMGLGRPAYPLSGPPQSHLSRVDSSHLLEFMSFTIAPVWTSLSWRYPRGKDRIGNPSLNLYLLGLIPKYLDLIFV
Ga0182196_110178113300017432Switchgrass PhyllosphereMNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRSAYPLSGSPRSHLSRVDSSHLLEFMSFTIAPLWMSLSWRYLWGKDRIGNPSLNLHLLCLIPKYLDLIFV
Ga0182196_114174713300017432Switchgrass PhyllosphereVRAIYKSRKPPVKGEAEPPQKRARPSGPMGLGRPAYPLSGSPRSHISRVDSSHLLEFMSFTIAPLWTSLSWRNLRGKDRIGNPS
Ga0182194_110874913300017435Switchgrass PhyllosphereMNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHLLRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIG
Ga0182200_109118013300017439Switchgrass PhyllosphereMRAIFKPRKPPVEGEAEPPRKRARPAGLMGLGRLAYPLSGLPRSPLSRVDSLHLLEFTSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLLCLIPKYLDLIFVGSVLWALLED
Ga0182215_113266713300017447Switchgrass PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPK
Ga0182212_103187213300017691Switchgrass PhyllosphereVDGCLELNKVGAIYKPRKPSVEGEAEPPQKRSGPAGPMGLGRPAYPFSGSPRSHLWRVDSSHLLEFLSFTIAPLWTLLSWRYLRGKDRIGNPSLN
Ga0182216_122169513300017693Switchgrass PhyllosphereVDGCFEMNKVRAIYKPRKPTVEGEAEPPQKWARPAGPMGLNWPAYPLSGSPWSHLSCVDSLHLLEFMSFTIAPLWTSLSWRYLWGKDRIGNPSLNLHLLCLIPKYLDLI
Ga0207869_100457113300025517Ionic Liquid And High Solid EnrichedVDGCFELNKVRAIYKPRKPPVEGEAEPPQKRAGPAGPMGLGRPAYPFSGSPRSHLWRVDSSHLLEFLSFTIAPLWTLLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0207646_1083738213300025922Corn, Switchgrass And Miscanthus RhizosphereVDGCFELNKVRAIYKPRKPPVEGEAKPPRKRAGPAGPMGLGRPAYPVSGSPRSHFSRADSSHLLEFMSFTIAPLLTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGL
Ga0268322_100928013300028049PhyllosphereVDSISELNKVRAIYKPRKPPVEGEAKPTRKRAGPAGPMGLGRPAYPFSGSPRSHLSRVDSSHLLEFLSFTIAPLWTLLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLI
Ga0268306_102430513300028054PhyllosphereVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHLLRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIP
Ga0268338_100256713300028055PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPFLNL
Ga0268330_105199613300028056PhyllosphereEFWVDGCFEMNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHLSRVDSSHLLEFMSFTIAPLWMSLSWRYLWGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0268330_106236623300028056PhyllosphereAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHFSRADSSHLLEFMSFTIAPLLTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0268352_100672613300028057PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALL
Ga0268332_107266313300028058PhyllosphereKPPVEGEAEPPRKWSRPAGLMGLGRPAYPLSGPPWSSLSRVDSSHLLEFMSFTIAPLSTSLSWRYPRGKDRIGNPSLNLYLLGLIPKYLDLIFVGLVLWTLLEDGCA
Ga0268342_101534213300028062PhyllosphereMVRAIYKPRKPPVEGEAEPPRKRARPAGLMGLGPPAYPLSGPPRSHLSRVNYSHLLEFMSFTIAPLWMLLSWIYLQGKDRIGNPSLNLYLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0268342_103306713300028062PhyllosphereVDGCSELNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPISGSPQSHFSRADSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGSVLW
Ga0268342_104352913300028062PhyllosphereTRAGRQPPPVLALGFRRVLGGLIPESNKVRAIYKSRKPPIEGEAEPPQKWARPAGLMGLGRPAYPLSGPPRSPLSRVDSSHLLEFMSFTIAPLWTSLSWRYPRGKDRIGNPSLNLYLLGLIPKYLDLIFVGLVLWTLLEDGCA
Ga0268334_101721213300028140PhyllosphereVDGCLELNKVRAIYKPRKPPVEGEAEPPQKRAGPAGPMGLGRPAYPFSGSPRSHLWRVDSSHLLEFLSFMIAPLWMLLSWRYLRGKDRIENPSLNLH
Ga0268320_100899723300028153PhyllosphereVDGCLELNKVRAIYKPRKPPVEGEAKPPRKRAGPAGPMGLGRPAYPLSGSPRSHFSRADSSHLLEFMSFTIAPLLTSLSWRYLRGKDRIRNP
Ga0268264_1051352113300028381Switchgrass RhizosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVG
Ga0268325_10147313300028463PhyllosphereVDSLSELNKVRAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLD
Ga0268317_100293713300028468PhyllosphereIEFWVDGCSELNKVRAIYKPRKPPVEGEAKPPQKQARSAGPMGLGRPAYPVSGLPRSHLLRADSLHLLEFMSFTIAPLWTSLSWRYLRGNDRIGNPSLNLCLLCLILKYLDLIFVGLVL
Ga0268315_102816313300028472PhyllosphereMNKVRAIYKPRKPTVEGEAEPPQKRARPAGPMGLNWPAYPLSGSPWSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLE
Ga0268331_102491613300028474PhyllosphereMVEGEAEPPQKRARPAGPMGLNWPAYPLSGSPWSHLSCVDSSHLLEFMSFTIAPLWMSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLILVGLVLWALLEDGCA
Ga0268335_101840813300028527PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDECASNQHGLWSFLWALAFVFLRVSARS
Ga0268311_101792213300028529PhyllosphereMNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHLSRVDSSHLLEFMSFTIAPLWMSLSWRYLWGKDRIENPSLNLHLLCLIPKYLDLIFVGLVLWALL
Ga0214492_109545223300032464Switchgrass PhyllosphereVDGCPELNKVRAIYKPRKPPVEGEAEPPRKRARPSDLMGLGRPAYPLSGPPRSHLSHVDSWHLLEFMSFTIAPLWALLSWRYLQRKDRIGNPSLNLYLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0214488_108131213300032467Switchgrass PhyllosphereVDGCLELNKVRAIYKPRKPPVEGEAKPPRKQAGPAGPMGLGQPAYPVSGSPRSHFSRADSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLI
Ga0214488_112258213300032467Switchgrass PhyllosphereGEAEPPRKRARPSDLMGLGRPAYPLSGPPRSHLSHVDSWHLLEFMSFTIAPLWTSLSWRYLQGKDRIGNPSLNLYLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0214488_114111423300032467Switchgrass PhyllosphereRAIYEPRKPPVEGEAEPPRKWARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLEFMFFTIAPLWISLSWRYLRENDRIENPFLNLHLFCLIPKYLNLIFVGLVLWALLEDGCA
Ga0214495_115508513300032490Switchgrass PhyllosphereVEFWVDGCSELNKVRAIYKPRKPPVEGEAKPTRKRAGPAGPMGLGRPAYPFSGSPRSHLSRVDSSHLLEFLSFTIAPLWTLLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0214490_115519713300032502Switchgrass PhyllosphereVDGFRELNKVRAIYKPRKPPVEGEAEPPRKRSRPAGPMGLGRPAYSLSGSPQSHLSRVGSSHLLEFMSFTIAPLWMSLSWRYLRGKDRIENPSLNLHLLFLIPKYLDLILQESPKDRAHEDEIKILRD
Ga0214490_115608613300032502Switchgrass PhyllosphereVDSLSELNKVRAIYKPRKPPVEGEAKPPRKRAGPAGPMGLGRPAYPLSGSPRSHFSRADSSHLLEFMFFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDL
Ga0214483_100301313300032548Switchgrass PhyllosphereVDSISELNKVRAIYKPRKPPVEGEAKPTRKRAGPAGPMGLGQPAYPLSGSPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0214483_105585613300032548Switchgrass PhyllosphereVDGCRELNKVRAIYKPRKPPVEGEAEPPRKRARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFV
Ga0214500_118355413300032589Switchgrass PhyllosphereVRAIYKPRKPPVEGEAEPPRKRARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFV
Ga0214489_105852013300032590Switchgrass PhyllosphereVDGCRELNKVQAIYEPRKPPVEGEAEPPRKWARPAGLMGLGRPAYPLSGPPRSHLSRVDSLHLLEFMSFTIAPLCTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWVLLEDGCA
Ga0214484_100906733300032591Switchgrass PhyllosphereVDGCLELNKMRAIYKPRKPPVEGEAEPPQKGAMPAGPMGLCRAAYPLSGSPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIENPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0321338_100513053300032593Switchgrass PhyllosphereMNKVRAIYKPRKPPVEGEAEPPRKRARPSGLMGLGRPAYPLSGPPRSHLSHVDSWHLLEFMSFTIAPLWALLSWRYLQRKDRIGNPSLNLYLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0214497_108772913300032689Switchgrass PhyllosphereVDGCPELNKVRSIYEPRKPPVEGKAEQPRKRSSLAGLMGLGWPAYPLSGPPRSRLLRVDSSHLLKFMSFMIAPLWTSLSWRYLRGKDRIENPSLNLHLLCLIPKYLDLIFMGLVLWALLEDG
Ga0214497_111691513300032689Switchgrass PhyllosphereVDGCRELNKVRAIYKPRKPPVEGEAEPRQKSARPAGPMGLGRPAYPVSGSHQSHFSRADFSHLLEFMFFTIAPLWTSLSWRYLREKDRIGNPSLNFHLLCLIPKYLDLIFVGSVLWALLEDGCA
Ga0214497_113009413300032689Switchgrass PhyllosphereDGCSELNKVRAIYEPRKPPVEGEAEPPRKWVRPAAYPLSDSPQSHLSRVDSSHLLEFMSFTIAPLLTSLSWRYLRGKDRIGNPSSNLHLLCLIPKYLDLIFMGLVLWALLEDGCA
Ga0214485_107334613300032698Switchgrass PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSRVDSSHLLEFLSFTIAPLWMSLSWRYLRGKDRIGNPSLNLHLLC
Ga0214494_102412023300032699Switchgrass PhyllosphereELNKVRAIYKPRKPPVEGEGKPPQKRAGPAGPMGLGRPAYPFSGSPRSHLWRVDSSHLLEFLSFTIAPLWTLLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0314753_100099423300032757Switchgrass PhyllosphereVRAIYKPRKPPVEGEAEPPRKRARPSDLMGLGRPAYPLSGPPRSHLSHVDSWHLLEFMSFTIAPLWALLSWRYLQRKDRIGNPSLNLYLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0314753_105268823300032757Switchgrass PhyllosphereMNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHFSRADSSHLLDFMSFTIAPLLTSLSWRYLRGKDRIGNPSSNLHLLCLIPKYLDLIFMGLVLWALLEDGCA
Ga0314746_112436413300032758Switchgrass PhyllosphereVRAIYKPRKPPVEGEAEPPRKRARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLECMSFTIAPLWTSSKRLHLLCLIPKYLDLIFVGLVLWALLEDG
Ga0314733_102779513300032761Switchgrass PhyllosphereVRAIYKPRKPPVEEEGKPPQKRAGPAGPMGLGRPAYPFLGSPRSHFWRVDSSHLLEFLSFTIAPLWTLLSWRYLQGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0314731_108556913300032790Switchgrass PhyllosphereVDRSPELNKVRAIYEPRKPPVEGEAELPRKWARPAGLMGLGRPAYPLSGPPRSHLSRVDSLHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLISVGLVLWALLEDGCA
Ga0314735_102367823300032824Switchgrass PhyllosphereVDGRFELNKVRAIYKPRKPPVEGEAEPPQKRAGPAGLMGLGRPAYPFLGSPRSHLWRVDSSHLLEFLSFTIAPLWTLLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGSVLWALLEDGCA
Ga0314743_111163613300032844Switchgrass PhyllosphereVDGCPELNKVRAIYKPRKPPVEGEGKPPQKRAGPAGPMGLGRPAYPFSGSPRSHFWRVDSSHLLEFLSFTIAPLWTLLSWRYLRGKDRIGNPSLN
Ga0314747_100363713300032890Switchgrass PhyllospherePVEGEAEPPRKRARPSGLMGLGRPAYPLSGPPRSHLSHVDSWHLLEFMSFTIAPLWALLSWRYLQRKDRIGNPSLNLYLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0314749_100153813300032915Switchgrass PhyllosphereVDRSPELNKVRAIYEPRKPPVEGEAELPRKWARPAGLMGLGRPAYPLSGPPRSHLSRPDSSHHLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLISVGLVLWALLEDGCA
Ga0314721_11522623300032917Switchgrass PhyllosphereVDRSPELNKVRAIYEPRKPPVEGEAEPPQKRARPAGPMGLGWPAYPLSGSPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGSVLWALLEDGCA
Ga0314738_105630813300032959Switchgrass PhyllosphereIYKPRKPPVEGEAEPPRKRARPSGLMGLGRPAYPLSGPPRSHLSHVDSSHLLEFMSFTIAPLWMSLSCRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGLVLWALLEDGCA
Ga0314752_104614313300032976Switchgrass PhyllosphereVDGCLELNKVRAIYKPRKPPVEGEAEPPQKRARPAGPMGLGRPAYPLSGSPRSHLSRVDSSHLLEFLSFMIAPLWTLLSWRYLRGKDRIGNPSLNLHLLCLIPK
Ga0314768_107600413300033523Switchgrass PhyllosphereVRAIYKPRKPPVEGEAEPPRKRARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGSVLWALLEDG
Ga0314758_117233613300033525Switchgrass PhyllosphereMDGCSALIKVRAIYKPRKPPVEGEAEPPRKRARPAGLMGLGRPAYPLSGPPRSHLSRVDSSHLLEFMSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPK
Ga0314757_100208713300033534Switchgrass PhyllosphereVDGCLELNKVRAIYKPRKPPVEGEAEPPQKRAGPAGPMGLGRPAYPISGSPRSHLSRVDSSHLLEFLSFTLAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLI
Ga0314759_100489323300033535Switchgrass PhyllosphereVDGCLELNKVGAIYKPRKPPVEGEAKPTRKRAGPAGPIGLGRPAYPFSGSPRSHFSCVDSSHLLEFLSFTIAPLWTSLSWRYLRGKDRIGNPSLNLHLLCLIPKYLDLIFVGSVLWALLEDGCA
Ga0314762_111182813300033539Switchgrass PhyllosphereVDGCFELNKVRAIYKPRKPPVEGEAKPPQKRARPAGPMGLGRPAYPVSGSPRSHLLRADSSHLLEFMSFTIALLWTSLSWRYLRGKDRIGNPSLNLYLLCLIPKYLDLIFVGLVLWALLEDGCA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.