Metagenome / Metatranscriptome Family F078928

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078928
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	44 residues
Representative Sequence	IREAQKNKDEQMEDVYWDRLDVANRLADECKANIQQIFNDTFGA
Number of Associated Samples	106
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.92 %
% of genes near scaffold ends (potentially truncated)	92.24 %
% of genes from short scaffolds (< 2000 bps)	91.38 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.345 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (18.103 % of family members)
Environment Ontology (ENVO)	Unclassified (66.379 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (86.207 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.94% β-sheet: 0.00% Coil/Unstructured: 43.06%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF04055	Radical_SAM	0.86
PF13186	SPASM	0.86
PF00255	GSHPx	0.86
PF08003	Methyltransf_9	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.10 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.34 %
Viruses	superkingdom	All Organisms → Viruses	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	57.76 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	12.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.76 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	12.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.76 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	12.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.76 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	12.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.76 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	12.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.76 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	12.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.76 %
Maribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter	12.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.76 %
unclassified Maribacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter	12.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.76 %
Unclassified	root	N/A	6.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	57.76 %
Maribacter sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	12.93 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.76 %
Unclassified	root	N/A	6.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001419\|JGI11705J14877_10130968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300001936\|GOS2220_1000127	All Organisms → Viruses → Predicted Viral	1742	Open in IMG/M
3300001951\|GOS2249_1021788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1249	Open in IMG/M
3300004448\|Ga0065861_1120262	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	523	Open in IMG/M
3300005523\|Ga0066865_10335150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300005914\|Ga0075117_1118793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	774	Open in IMG/M
3300005933\|Ga0075118_10196173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300006190\|Ga0075446_10107759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300006193\|Ga0075445_10316388	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	526	Open in IMG/M
3300006789\|Ga0098054_1329386	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	544	Open in IMG/M
3300006925\|Ga0098050_1081280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	835	Open in IMG/M
3300007074\|Ga0075110_1072200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300007074\|Ga0075110_1075529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300007234\|Ga0075460_10255888	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300007541\|Ga0099848_1315128	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300009409\|Ga0114993_11281066	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300009420\|Ga0114994_10633526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	700	Open in IMG/M
3300009422\|Ga0114998_10310877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300009423\|Ga0115548_1136903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300009447\|Ga0115560_1409017	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300009472\|Ga0115554_1244580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300009495\|Ga0115571_1382455	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300009496\|Ga0115570_10289010	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	713	Open in IMG/M
3300009496\|Ga0115570_10377784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300009505\|Ga0115564_10317715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300009507\|Ga0115572_10427756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300009507\|Ga0115572_10765636	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300009526\|Ga0115004_10980059	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	506	Open in IMG/M
3300009593\|Ga0115011_10793525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	783	Open in IMG/M
3300009703\|Ga0114933_10638456	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	685	Open in IMG/M
3300011129\|Ga0151672_142385	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012928\|Ga0163110_11400561	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300012936\|Ga0163109_11336173	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300012954\|Ga0163111_10781714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	907	Open in IMG/M
3300014959\|Ga0134299_1047803	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	620	Open in IMG/M
3300017713\|Ga0181391_1126691	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300017719\|Ga0181390_1174243	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	529	Open in IMG/M
3300017728\|Ga0181419_1113438	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300017737\|Ga0187218_1124370	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300017744\|Ga0181397_1164268	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	564	Open in IMG/M
3300017750\|Ga0181405_1186830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300017751\|Ga0187219_1192491	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300017753\|Ga0181407_1093054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	763	Open in IMG/M
3300017755\|Ga0181411_1146054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300017771\|Ga0181425_1201060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300017776\|Ga0181394_1088305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	999	Open in IMG/M
3300017776\|Ga0181394_1124980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300017818\|Ga0181565_10497633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300017949\|Ga0181584_10593537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300017951\|Ga0181577_10269727	All Organisms → Viruses → Predicted Viral	1114	Open in IMG/M
3300017969\|Ga0181585_10626993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	709	Open in IMG/M
3300018410\|Ga0181561_10031955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3573	Open in IMG/M
3300018413\|Ga0181560_10293263	Not Available	763	Open in IMG/M
3300018418\|Ga0181567_10366931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	958	Open in IMG/M
3300018421\|Ga0181592_10551731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	789	Open in IMG/M
3300018421\|Ga0181592_10630667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
3300018542\|Ga0188841_100219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1126	Open in IMG/M
3300018544\|Ga0188857_100050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	920	Open in IMG/M
3300018548\|Ga0188869_100270	All Organisms → Viruses → Predicted Viral	1026	Open in IMG/M
3300018563\|Ga0188861_1000307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1133	Open in IMG/M
3300018642\|Ga0188867_1001375	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300018642\|Ga0188867_1001480	All Organisms → Viruses → Predicted Viral	1070	Open in IMG/M
3300019077\|Ga0188868_1000906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300019098\|Ga0188859_1001288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1200	Open in IMG/M
3300020055\|Ga0181575_10050851	All Organisms → Viruses → Predicted Viral	2643	Open in IMG/M
3300020165\|Ga0206125_10326012	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300020177\|Ga0181596_10060627	All Organisms → Viruses → Predicted Viral	2138	Open in IMG/M
3300020194\|Ga0181597_10269139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	778	Open in IMG/M
3300020207\|Ga0181570_10406729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300020253\|Ga0211685_1016004	All Organisms → Viruses → Predicted Viral	1110	Open in IMG/M
3300020382\|Ga0211686_10239553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
3300020414\|Ga0211523_10281823	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	682	Open in IMG/M
3300020419\|Ga0211512_10428446	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	594	Open in IMG/M
3300020460\|Ga0211486_10363068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	621	Open in IMG/M
3300020468\|Ga0211475_10431614	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300020601\|Ga0181557_1170310	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300021365\|Ga0206123_10211515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300021957\|Ga0222717_10532695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300021959\|Ga0222716_10491127	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	692	Open in IMG/M
3300021960\|Ga0222715_10637847	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300022068\|Ga0212021_1127982	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	520	Open in IMG/M
3300022935\|Ga0255780_10375003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300023087\|Ga0255774_10276763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	818	Open in IMG/M
3300023105\|Ga0255782_10340976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	688	Open in IMG/M
3300023170\|Ga0255761_10238624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	993	Open in IMG/M
3300023180\|Ga0255768_10382011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300025137\|Ga0209336_10195416	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	502	Open in IMG/M
3300025168\|Ga0209337_1210579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	780	Open in IMG/M
3300025168\|Ga0209337_1241530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300025637\|Ga0209197_1097464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	874	Open in IMG/M
3300025687\|Ga0208019_1186098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300025704\|Ga0209602_1222511	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300025770\|Ga0209362_1200800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300025886\|Ga0209632_10335146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300025889\|Ga0208644_1235157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300025892\|Ga0209630_10272837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300026097\|Ga0209953_1046169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	620	Open in IMG/M
3300026187\|Ga0209929_1095799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300027522\|Ga0209384_1079848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	813	Open in IMG/M
3300027672\|Ga0209383_1161638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	685	Open in IMG/M
3300028132\|Ga0228649_1128286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300031142\|Ga0308022_1151541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	667	Open in IMG/M
3300031167\|Ga0308023_1037356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	954	Open in IMG/M
3300031519\|Ga0307488_10360744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	912	Open in IMG/M
3300031621\|Ga0302114_10251429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300031623\|Ga0302123_10257315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300031623\|Ga0302123_10340652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	710	Open in IMG/M
3300031701\|Ga0302120_10333897	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Maribacter → unclassified Maribacter → Maribacter sp.	544	Open in IMG/M
3300032011\|Ga0315316_10318123	All Organisms → Viruses → Predicted Viral	1305	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	84.48%
Freshwater	Environmental → Aquatic → Freshwater	9.48%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	6.03%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	21.55%
Oceanic	Environmental → Aquatic → Marine → Oceanic	15.52%
Unclassified	Environmental → Aquatic → Marine → Unclassified	13.79%
Pelagic	Environmental → Aquatic → Marine → Pelagic	11.21%
Strait	Environmental → Aquatic → Marine → Strait	11.21%
Lentic	Environmental → Aquatic → Freshwater → Lentic	9.48%
Coastal	Environmental → Aquatic → Marine → Coastal	8.62%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	6.03%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.72%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.86%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	18.10%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	13.79%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	12.93%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	11.21%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	11.21%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	9.48%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	8.62%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	5.17%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	3.45%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.59%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.86%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.86%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	18.10%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	12.93%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	11.21%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	9.48%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.48%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	9.48%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.31%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	2.59%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.59%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.59%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	2.59%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.72%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.72%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.72%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.72%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.72%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.86%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.86%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.86%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.86%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.86%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	0.86%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300001936	Marine microbial communities from Halifax, Nova Scotia, Canada - GS004	Environmental	Open in IMG/M
3300001951	Marine microbial communities from North Seamore Island, Equador - GS034	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005914	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ	Environmental	Open in IMG/M
3300005933	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKE	Environmental	Open in IMG/M
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300007074	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK8	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009422	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009447	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509	Environmental	Open in IMG/M
3300009472	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110404	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009505	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523	Environmental	Open in IMG/M
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300011129	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300014959	Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0148 : 4 days incubation	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017737	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2)	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017751	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018048	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018542	Metatranscriptome of marine microbial communities from Baltic Sea - GS677_3p0	Environmental	Open in IMG/M
3300018544	Metatranscriptome of marine microbial communities from Baltic Sea - GS683_3p0	Environmental	Open in IMG/M
3300018548	Metatranscriptome of marine microbial communities from Baltic Sea - GS695_3p0	Environmental	Open in IMG/M
3300018563	Metatranscriptome of marine microbial communities from Baltic Sea - GS684_3p0	Environmental	Open in IMG/M
3300018642	Metatranscriptome of marine microbial communities from Baltic Sea - GS695_0p1	Environmental	Open in IMG/M
3300019060	Metatranscriptome of marine microbial communities from Baltic Sea - GS680_3p0	Environmental	Open in IMG/M
3300019073	Metatranscriptome of marine microbial communities from Baltic Sea - GS683_0p1	Environmental	Open in IMG/M
3300019077	Metatranscriptome of marine microbial communities from Baltic Sea - GS695_0p8	Environmental	Open in IMG/M
3300019098	Metatranscriptome of marine microbial communities from Baltic Sea - GS684_0p1	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020165	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1	Environmental	Open in IMG/M
3300020177	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041402US metaG (spades assembly)	Environmental	Open in IMG/M
3300020194	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041403US metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020253	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX555982-ERR598945)	Environmental	Open in IMG/M
3300020382	Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020460	Marine microbial communities from Tara Oceans - TARA_A100001037 (ERX555931-ERR599097)	Environmental	Open in IMG/M
3300020468	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)	Environmental	Open in IMG/M
3300020601	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300023087	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG	Environmental	Open in IMG/M
3300023105	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025637	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110512 (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025704	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524 (SPAdes)	Environmental	Open in IMG/M
3300025770	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025886	Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300026097	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027672	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA (SPAdes)	Environmental	Open in IMG/M
3300028132	Seawater microbial communities from Monterey Bay, California, United States - 61D	Environmental	Open in IMG/M
3300031142	Marine microbial communities from water near the shore, Antarctic Ocean - #353	Environmental	Open in IMG/M
3300031167	Marine microbial communities from water near the shore, Antarctic Ocean - #418	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031623	Marine microbial communities from Western Arctic Ocean, Canada - CB21_32.1	Environmental	Open in IMG/M
3300031701	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Bottom	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11705J14877_101309682	3300001419	Saline Water And Sediment	EAMEDIYWDRLDVANRLADECKSRIQMIFNDTFGA*
GOS2220_10001275	3300001936	Marine	QRMIREAQKGKDEQMEDVYWDRMDTANRLADDCKARIQHIFNDTFGA*
GOS2249_10217882	3300001951	Marine	EAQKEKDELTEDVYWDRLDVANHLADDCKGKIQQIFNDTFGA*
Ga0065861_11202621	3300004448	Marine	IREAQKENDEIKEDVYWDRLDTANHLADECKGRIQQIFNDTFGA*
Ga0066865_103351501	3300005523	Marine	IKEAHKEKNELSEDVYWDRLDAANRLADQCKADIQQIFNDTFGA*
Ga0075117_11187932	3300005914	Saline Lake	KRMIREAQKNSDEMSEDVYWDRLDTANRLADDCKARIQHIFNDTFGA*
Ga0075118_101961731	3300005933	Saline Lake	REAQKGKDEQMEDVYWDRMDTANRLADDCKGSIQQIFNDTFGA*
Ga0075446_101077592	3300006190	Marine	QKNKDEQIEDIYWDRLDVANRLADECKDNIQQIFNDTFGT*
Ga0075445_103163881	3300006193	Marine	KNKDEQIEDIYWDRLDVANRLADECKDNIQQIFNDTFGT*
Ga0098054_13293862	3300006789	Marine	QKNKDEQMEDVYWDRLDVANRLADECKANIQQIFSDTFGA*
Ga0098050_10812802	3300006925	Marine	MIKEAQKNKDEQMEDVYWDRLDVANRLADECKGNIQQIFNDTFGA*
Ga0075110_10722002	3300007074	Saline Lake	QKGKDEQMEDVYWDRMDTANRLADDCKGSIQQIFNDTFGA*
Ga0075110_10755291	3300007074	Saline Lake	NAKRMIREAQKGKDEQMEDVYWDRMDTANRLADECKGRIQQIFNDTFGA*
Ga0075460_102558881	3300007234	Aqueous	MIREAQKNKDEQMEDVYWDRLDVANRLADECKANIQQIFNDTFGA*
Ga0099848_13151281	3300007541	Aqueous	MEDIYWDRLDVANRLADECKSRIQMIFNDTFGAQIINKHV*
Ga0114993_112810662	3300009409	Marine	DKDEQMEDVYWDRMDTANRLADDCKGNIQQIFNDTFGA*
Ga0114994_106335261	3300009420	Marine	AQKDKDELKEDVYWDRLDQANHLADDCKGKIQQIFSDTFGA*
Ga0114998_103108771	3300009422	Marine	DLSEDVYWDRLDTANHLADECKGRIQQIFNDTFGA*
Ga0115548_11369032	3300009423	Pelagic Marine	QKNKDEQMEDVYWDRLDVANRLADECKANIQQIFNDTFGA*
Ga0115560_14090171	3300009447	Pelagic Marine	AKRMIREAQKGKDEQMEDVYWDRMDTANRLADDCKASIQQIFNDTFGA*
Ga0115554_12445802	3300009472	Pelagic Marine	DEQMEDVYWDRLDVANRLADDCKDKIQAIFSDTFGA*
Ga0115571_13824552	3300009495	Pelagic Marine	QNAKRMIREAQKGKDEQMEDVYWDRMDTANRLADDCKAKIQQIFNDTFGA*
Ga0115570_102890101	3300009496	Pelagic Marine	REAQKGKDEQMEDVYWDRLDVANRLADEHKDKIQQIFNDTFGS*
Ga0115570_103777842	3300009496	Pelagic Marine	AQKGKDEQMEDVYWDRMDTANRLADDCKARIQHIFNDTFGA*
Ga0115564_103177151	3300009505	Pelagic Marine	EAQKGKEDLSEDVYWDRLDTANHLADECKGRIQQIFNDTFGA*
Ga0115572_104277561	3300009507	Pelagic Marine	SAKRMIKEAQKNKDEQMEDVYWDRLDVANRLADECKANIQQIFSDTFGA*
Ga0115572_107656361	3300009507	Pelagic Marine	KEAQKNKDEQMEDVYWDRLDVANRLADDCKGNIQQIFNDTFGA*
Ga0115004_109800591	3300009526	Marine	KGKDEQMEDVYWDRMDTANRLADDCKARIQQIFNDTFGA*
Ga0115011_107935252	3300009593	Marine	MIREAQKSKDELTEDVYWDRLDVANRLADECKGNIQQIFNDTFGA*
Ga0114933_106384561	3300009703	Deep Subsurface	NAKRMIKEAQRSKDQLTEDVYWDRLDVANHLADECKENIQAIFNDTFGA*
Ga0151672_1423852	3300011129	Marine	IKEAQKSKDEQMEDVYWDRLDAANRLADECKGNIQQIFSDTFGT*
Ga0163110_114005611	3300012928	Surface Seawater	IKEAQKAKDIAQEDVYYDRLDTANHLADQCKSNIQQIFNDTFGG*
Ga0163109_113361732	3300012936	Surface Seawater	QNAKRMIREAQKEKDELMEDVYWDRLDVANRLADDCKTKIQHIFNDTFGA*
Ga0163111_107817141	3300012954	Surface Seawater	IREAQKEKDELMEDVYWDRLDVANRLADECKSKIQHIFNDTFGA*
Ga0134299_10478032	3300014959	Marine	QSAKRMIREAQKGKDEQMEDVYWDRLDVANRLADECKANIQQIFSDTFGT*
Ga0181391_11266911	3300017713	Seawater	IREAQKSKDELTEDVYWDRLDVANRLADECKGNIQQIFNDTFGA
Ga0181390_11742431	3300017719	Seawater	IKEAQKSKDELTEDVYWDRLDVANRLADDCKTNIQQIFSDTFGA
Ga0181419_11134381	3300017728	Seawater	KSKDELTEDVYWDRLDVANRLADDCKTNIQQIFSDTFGT
Ga0187218_11243701	3300017737	Seawater	QSAKRMIREAQKEDNTTQEDVYYDRLDQANHLADQCKSNIQQIFNDTFGG
Ga0181397_11642681	3300017744	Seawater	QSAKRMIKEAQKNKDEQMEDVYWDRLDVANRLADECKANIQQIFSDTFGG
Ga0181405_11787341	3300017750	Seawater	DITSAKRMIREAQRSKDELMEDVYWDRLDVANRLADECKANIQQIFSDTFGG
Ga0181405_11868301	3300017750	Seawater	DQVEDVYWDRLDAANHLADECKGRIQQIFSDTFGA
Ga0187219_11924911	3300017751	Seawater	EAQKNKDEQMEDVYWDRLDVANRLADECKANIQQIFSDTFGA
Ga0181407_10930542	3300017753	Seawater	AQKNKDEQMEDVYWDRLDVANRLADECKGNIQQIFSDTFGG
Ga0181411_11460541	3300017755	Seawater	IREAQKEDNTTQEDVYYDRLDQANHLADQCKSNIQQIFNDTFGG
Ga0181425_12010602	3300017771	Seawater	DELTEDVYWDRLDVANRLADDCKTNIQQIFSDTFGA
Ga0181394_10883052	3300017776	Seawater	KGKDAQVEDVYWDRLDAANHLADECKGRIQQIFSDTFGA
Ga0181394_11249801	3300017776	Seawater	QKEDNTTQEDVYYDRLDQANHLADDCKGKIQQIFNDTFGG
Ga0181565_104976332	3300017818	Salt Marsh	AKRMIREAQKEKDELMEDVYWDRLDVANRLADDCKGKIQHIFNDTFGG
Ga0181552_101350351	3300017824	Salt Marsh	IQNAKRMIKEAQKNKDETMEDIYWDRLDVANRLADECKSRIQMIFNDTFGA
Ga0181584_105935372	3300017949	Salt Marsh	DEQMEDVYWDRLDVANRLADDCKSNIQQIFNDTFGA
Ga0181577_102697271	3300017951	Salt Marsh	NAKRMIREAQKEKDELMEDVYWDRLDVANRLADECKGKIQHIFNDTFGG
Ga0181585_106269931	3300017969	Salt Marsh	QKNKDEAMEDIYWDRLDVANRLADECKSRIQMIFNDTFGA
Ga0181606_107072061	3300018048	Salt Marsh	IQNAKRMIREAQKDEDELTEDVYWDRLDVANRLADECKSRIQMIFNDTFGA
Ga0181561_100319551	3300018410	Salt Marsh	NKDEQMEDVYWDRLDVANRLADDCKANIQQIFNDTFGA
Ga0181560_102932631	3300018413	Salt Marsh	SAKRMIKEAQKDKDELTEDVYWDRLDSANRLADECKANIQNIFNETFRG
Ga0181567_103669311	3300018418	Salt Marsh	QKNKDEQMEDVYWDRLDVANRLADECKANIQQIFNDTFGA
Ga0181592_105517312	3300018421	Salt Marsh	AKRMIKEAQKNKDEAMEDIYWDRLDVANRLADECKSRIQMIFSDTFGA
Ga0181592_106306671	3300018421	Salt Marsh	EAQKDEDELTEDVYWDRLDVANRLADECKSRIQHIFNDTFGA
Ga0188841_1002192	3300018542	Freshwater Lake	IGRHRGAKRMIREAQKNSDEMSEDVYWDRLDSANHLADECKARIQQIFNDTFGG
Ga0188857_1000502	3300018544	Freshwater Lake	AKRMIREAQKGKDEQMEDVYWDRMDTANRLADDCKARIQHIFNDTFGA
Ga0188869_1002701	3300018548	Freshwater Lake	TIGRHRGAKRMIREAQKGKDEQMEDVYWDRLDVANRLADEYKDKIQQIFSDTFGT
Ga0188861_10003072	3300018563	Freshwater Lake	MIREAQKNSDEMSEDVYWDRLDSANHLADECKARIQQIFNDTFGG
Ga0188867_10013751	3300018642	Freshwater Lake	RGAKRMIREAQKGKEDLSEDVYWDRLDTANHLADECKGRIQQIFNDTFGA
Ga0188867_10014802	3300018642	Freshwater Lake	GAKRMIREAQKGKDEQMEDVYWDRLDVANRLADEYKDKIQQIFSDTFGT
Ga0188853_1000671	3300019060	Freshwater Lake	RPVIVIRLTIGRHRGAKRMIREAQKNSDEMSEDVYWDRLDSANHLADECKARIQQIFNDTFGG
Ga0188855_10002732	3300019073	Freshwater Lake	FTIGRHRGAKRMIREAQKGKEDLSEDVYWDRLDTANHLADECKGRIQQIFNDTFGA
Ga0188855_10002912	3300019073	Freshwater Lake	RLTIGRHRGAKRMIREAQKGKDEQMEDVYWDRMDTANRLADDCKARIQHIFNDTFGA
Ga0188868_10009061	3300019077	Freshwater Lake	EAQKGKEDLSEDVYWDRLDTANHLADECKGRIQQIFNDTFGA
Ga0188859_10012881	3300019098	Freshwater Lake	TIGRHRGAKRMIREAQKNSDEMSEDVYWDRLDSANHLADECKARIQQIFNDTFGG
Ga0181575_100508515	3300020055	Salt Marsh	REAQKNKDEQMEDVYWDRLDVANRLADECKANIQQIFNDTFGA
Ga0206125_103260121	3300020165	Seawater	EQMEDVYWDRLDVANRLADECKGNIQQIFNDTFGT
Ga0181596_100606275	3300020177	Salt Marsh	RMSREAQKDEDELTEDVYWDRLDVANRLADECKSNIQRIFNDTFGA
Ga0181597_102691391	3300020194	Salt Marsh	IREAQKEKDEQMEDVYWDRLDVANRLADECKGNIQQIFNDTFGA
Ga0181570_104067291	3300020207	Salt Marsh	RMIREAQKAKDEQMEDVYWDRLDVANRLADDCKAKIQHIFNDTFGA
Ga0211685_10160041	3300020253	Marine	EKDEVKEDVYWDRLDSANHLADECKGRIQQIFNDTFGV
Ga0211686_102395532	3300020382	Marine	KDELSEDVYWDRLDTANYLADECKGRIQQIFNDTFGA
Ga0211523_102818231	3300020414	Marine	QKEKDELMEDVYWDRLDVANRLADDCKTKIQHIFNDTFGA
Ga0211512_104284461	3300020419	Marine	AQKEKNEQSEDVYWDRLDVANRLADECKGMLQQIFNDTFGS
Ga0211548_103862661	3300020454	Marine	DIQNAKRLIREAQKLKDAQMEDVYWDRLDVANRLADECKGKIQQIFSDTFGT
Ga0211486_103630681	3300020460	Marine	EAQKEKDSAKEHIYYDRLDTANHLADSYKSEIQHIFNQTFGA
Ga0211475_104316142	3300020468	Marine	KEKDPAKEDIYYDRLDTANHLADSYKSEIQHIFNQTFGA
Ga0181557_11703102	3300020601	Salt Marsh	MIREAQKNKDEQMEDVYWDRLDVANRLADECKANIQQIFNDTFGA
Ga0206123_102115152	3300021365	Seawater	KRMIKEAQKNKDEQMEDVYWDRLDVANRLADECKANIQQIFSDTFGT
Ga0222717_105326952	3300021957	Estuarine Water	EQMEDVYWDRLDVANRLADECKANIQQIFNDTFGA
Ga0222716_104911272	3300021959	Estuarine Water	IREAQKNKDEQMEDVYWDRLDVANRLADECKANIQQIFNDTFGA
Ga0222715_106378472	3300021960	Estuarine Water	AKRMIREAQKNKDEQMEDVYWDRLDVANRLADECKANIQQIFNDTFGA
Ga0212021_11279822	3300022068	Aqueous	SAKRMIKEAQKNKDEQMEDVYWHRLDVANRLADECKANIQQIFNDTFGA
Ga0255780_103750032	3300022935	Salt Marsh	DEQMEDVYWHRLDVANRLADECKANIQQIFNDTFGA
Ga0255774_102767632	3300023087	Salt Marsh	QKEKDELMEDVYWDRLDVANRLADECKGKIQHIFNDTFGG
Ga0255782_103409761	3300023105	Salt Marsh	IREAQKEKDELMEDVYWDRLDVANRLADECKGKIQHIFNDTFGG
Ga0255761_102386242	3300023170	Salt Marsh	QREKDEAKEDIYYDRLDVANRLADECKSRIQHIFNDTFGA
Ga0255768_103820111	3300023180	Salt Marsh	ELTEDVYWDRLDVANRLADECKSRIQMIFNDTFGA
Ga0209336_101954162	3300025137	Marine	KRMIREAQKDNDQLTEDVYWDRLDQANHLADDCKGKIQQIFSDTFGA
Ga0209337_12105792	3300025168	Marine	KRMIREAQKGKDEQMEDVYWDRMDTANRLADDCKARIQHIFNDTFGA
Ga0209337_12415301	3300025168	Marine	RMIKEAQKSKDEQMEDVYWDRLDAANRLADECKGNIQQIFSDTFGT
Ga0209197_10974641	3300025637	Pelagic Marine	REAQKGKDEQMEDVYWDRMDTANRLADDCKARIQHIFNDTFGA
Ga0208019_11860981	3300025687	Aqueous	KRMIREAQKDEDELTEDVYWDRLDVANRLADECKSKIQHIFNDTFGA
Ga0209602_12225112	3300025704	Pelagic Marine	NKDEQMEDVYWDRLDVANRLADECKANIQQIFSDTFGA
Ga0209362_12008002	3300025770	Marine	AKRMIKEAQKNKDEQMEDVYWDRLDVANRLADECKADIQQIFSDTFGA
Ga0209632_103351461	3300025886	Pelagic Marine	QKGKDEQMEDVYWDRLDVANRLADEHKDKIQQIFNDTFGS
Ga0208644_12351571	3300025889	Aqueous	RMIREAQKEKDELMEDVYWDRLDVANRLADECKGKIQHIFNDTFGG
Ga0209630_102728372	3300025892	Pelagic Marine	NKDEQMEDVYWDRLDVANRLADECKGNIQQIFSDTFGA
Ga0209953_10461691	3300026097	Pond Water	KGKDEQMEDVYWDRLDVANRLADECKDKIQQIFSDTFGS
Ga0209929_10957991	3300026187	Pond Water	MIKEAQKNKDEAMEDIYWDRLDVANRLADECKSRIQMIFNDTFGA
Ga0209384_10798482	3300027522	Marine	QKNKDEQIEDIYWDRLDVANRLADECKDNIQQIFNDTFGT
Ga0209383_11616381	3300027672	Marine	KNKDEQIEDIYWDRLDVANRLADECKDNIQQIFNDTFGT
Ga0228649_11282862	3300028132	Seawater	EDNTTQEDVYYDRLDQANHLADDCKGKIQQIFNDTFGG
Ga0308022_11515412	3300031142	Marine	REAQKTKDEMAEDVYWDRLDSANHLADECKGRIQQIFNDTFGA
Ga0308023_10373561	3300031167	Marine	DNATQEDVYYDRLDQANHLADQCKSSIQQIFNDTFGR
Ga0307488_103607442	3300031519	Sackhole Brine	MIREAQKGKEDLSEDVYWDRLDTANHLADECKGRIQQIFNDTFGA
Ga0302114_102514291	3300031621	Marine	SAKRMIREAQKGKDEQMEDVYWDRMDTANRLADDCKARIQHIFNDTFGA
Ga0302123_102573152	3300031623	Marine	SKRMIKEAKKEKDDMKEAVYYDRLDSANSLADKYKGDIQQIFNHTFGG
Ga0302123_103406521	3300031623	Marine	QSAKRMIREAQKNDDEMSEDVYWDRLDSANRLADECKGKIQHIFNDTFGG
Ga0302120_103338972	3300031701	Marine	KRMIREAQKNDDEMSEDVYWDRLDTANHLADECKGRIQQIFNDTFGA
Ga0315316_103181231	3300032011	Seawater	MIREAQKEKDEVTEDVYWDRLDVANRLADECKSKLQQIFNDTFGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078928

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences