Metagenome / Metatranscriptome Family F069434

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069434
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	64 residues
Representative Sequence	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMSCLRCGRS
Number of Associated Samples	72
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	91.94 %
% of genes near scaffold ends (potentially truncated)	19.35 %
% of genes from short scaffolds (< 2000 bps)	79.03 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.806 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (31.452 % of family members)
Environment Ontology (ENVO)	Unclassified (89.516 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (67.742 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.65% β-sheet: 0.00% Coil/Unstructured: 48.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
a.140.2.1: SAP domain	d1v66a_	1v66	0.63552
a.24.9.1: alpha-catenin/vinculin	d1st6a5	1st6	0.63061
a.77.1.3: Caspase recruitment domain, CARD	d4a2wa4	4a2w	0.62904
a.29.3.2: acyl-CoA oxidase C-terminal domains	d2ddha2	2ddh	0.62367
e.22.1.1: Dehydroquinate synthase, DHQS	d1sg6a_	1sg6	0.6218

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF06094	GGACT	34.68
PF12224	Amidoligase_2	4.03
PF01420	Methylase_S	0.81
PF01381	HTH_3	0.81
PF13437	HlyD_3	0.81
PF01168	Ala_racemase_N	0.81
PF02773	S-AdoMet_synt_C	0.81
PF02837	Glyco_hydro_2_N	0.81
PF00872	Transposase_mut	0.81
PF00476	DNA_pol_A	0.81
PF01471	PG_binding_1	0.81
PF05598	DUF772	0.81
PF00574	CLP_protease	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.61
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.61
COG0192	S-adenosylmethionine synthetase	Coenzyme transport and metabolism [H]	0.81
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	0.81
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.81
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.81
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.81 %
All Organisms	root	All Organisms	49.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.81 %
cellular organisms	root	All Organisms → cellular organisms	48.39 %
Viruses	superkingdom	All Organisms → Viruses	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.81 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	20.16 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	3.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.81 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	20.16 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	3.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.81 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	12.90 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	3.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.61 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.81 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	11.29 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	3.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.61 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.81 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	3.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.61 %
unclassified Eubacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales	0.81 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.81 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.81 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	3.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.61 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.81 %
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	0.81 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.81 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	3.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.61 %
Clostridium minihomine	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium minihomine	0.81 %
Clostridiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	0.81 %
Negativicutes	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001567\|Draft_10001239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	38718	Open in IMG/M
3300001567\|Draft_10005285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	11919	Open in IMG/M
3300001567\|Draft_10005652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	11185	Open in IMG/M
3300001567\|Draft_10041914	Not Available	1743	Open in IMG/M
3300001567\|Draft_10081821	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300001567\|Draft_10196426	Not Available	504	Open in IMG/M
3300001682\|SAHD_10055135	Not Available	1765	Open in IMG/M
3300001865\|JGI2065J20421_1000316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	68996	Open in IMG/M
3300001865\|JGI2065J20421_1000336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	65189	Open in IMG/M
3300002498\|TOLCLC_10021529	All Organisms → cellular organisms → Bacteria	29869	Open in IMG/M
3300002498\|TOLCLC_10022674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3266	Open in IMG/M
3300002498\|TOLCLC_10022675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2450	Open in IMG/M
3300002498\|TOLCLC_10031085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	4476	Open in IMG/M
3300002498\|TOLCLC_10402244	Not Available	512	Open in IMG/M
3300002898\|draft_10134514	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300003471\|FeGluNO3_10023000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	15900	Open in IMG/M
3300003471\|FeGluNO3_10023001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Negativicutes	3800	Open in IMG/M
3300006033\|Ga0075012_10150949	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300006033\|Ga0075012_10198417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1432	Open in IMG/M
3300006033\|Ga0075012_10281837	Not Available	1141	Open in IMG/M
3300006033\|Ga0075012_10296981	Not Available	1103	Open in IMG/M
3300006033\|Ga0075012_10310165	Not Available	1072	Open in IMG/M
3300006033\|Ga0075012_10599715	Not Available	692	Open in IMG/M
3300006033\|Ga0075012_10687614	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300009121\|Ga0118671_1042099	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300009121\|Ga0118671_1060394	Not Available	1054	Open in IMG/M
3300009121\|Ga0118671_1067543	Not Available	980	Open in IMG/M
3300009121\|Ga0118671_1074235	Not Available	923	Open in IMG/M
3300009122\|Ga0118674_1008132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	3461	Open in IMG/M
3300009122\|Ga0118674_1009877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3009	Open in IMG/M
3300009122\|Ga0118674_1010313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2924	Open in IMG/M
3300009360\|Ga0118672_1056260	Not Available	1097	Open in IMG/M
3300009362\|Ga0118673_1064489	Not Available	1104	Open in IMG/M
3300009362\|Ga0118673_1083605	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300009607\|Ga0123327_1141555	Not Available	823	Open in IMG/M
3300009607\|Ga0123327_1209834	Not Available	632	Open in IMG/M
3300009647\|Ga0123326_1129825	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300009647\|Ga0123326_1156329	Not Available	720	Open in IMG/M
3300009652\|Ga0123330_1055648	Not Available	1690	Open in IMG/M
3300009652\|Ga0123330_1149740	Not Available	852	Open in IMG/M
3300009656\|Ga0123329_1033681	All Organisms → cellular organisms → Bacteria	2482	Open in IMG/M
3300009659\|Ga0123328_1096415	Not Available	1238	Open in IMG/M
3300009666\|Ga0116182_1054093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2246	Open in IMG/M
3300009666\|Ga0116182_1212140	Not Available	851	Open in IMG/M
3300009670\|Ga0116183_1118533	Not Available	1358	Open in IMG/M
3300009671\|Ga0123334_1142550	Not Available	1155	Open in IMG/M
3300009671\|Ga0123334_1409549	Not Available	568	Open in IMG/M
3300009676\|Ga0116187_1338143	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	668	Open in IMG/M
3300009680\|Ga0123335_1171831	All Organisms → Viruses → Predicted Viral	1150	Open in IMG/M
3300009680\|Ga0123335_1250740	Not Available	879	Open in IMG/M
3300009681\|Ga0116174_10139249	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300009682\|Ga0116172_10282166	Not Available	818	Open in IMG/M
3300009682\|Ga0116172_10413967	Not Available	632	Open in IMG/M
3300009687\|Ga0116144_10421708	Not Available	665	Open in IMG/M
3300009688\|Ga0116176_10411984	Not Available	659	Open in IMG/M
3300009689\|Ga0116186_1147797	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300009693\|Ga0116141_10069762	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300009694\|Ga0116170_10093713	Not Available	1921	Open in IMG/M
3300009696\|Ga0116177_10652629	Not Available	546	Open in IMG/M
3300009715\|Ga0116160_1070652	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300009715\|Ga0116160_1081126	All Organisms → cellular organisms → Bacteria	1446	Open in IMG/M
3300009720\|Ga0116159_1298970	Not Available	621	Open in IMG/M
3300009767\|Ga0116161_1039416	All Organisms → cellular organisms → Bacteria	2617	Open in IMG/M
3300009767\|Ga0116161_1076497	All Organisms → cellular organisms → Bacteria	1666	Open in IMG/M
3300009770\|Ga0123332_1232016	Not Available	766	Open in IMG/M
3300009770\|Ga0123332_1248858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium minihomine	732	Open in IMG/M
3300009770\|Ga0123332_1253362	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	724	Open in IMG/M
3300009770\|Ga0123332_1308627	Not Available	637	Open in IMG/M
3300009773\|Ga0123333_10120258	Not Available	1243	Open in IMG/M
3300009773\|Ga0123333_10226645	Not Available	806	Open in IMG/M
3300009780\|Ga0116156_10483484	Not Available	590	Open in IMG/M
3300009783\|Ga0116158_10539108	Not Available	612	Open in IMG/M
3300009838\|Ga0116153_10218947	Not Available	782	Open in IMG/M
3300009873\|Ga0131077_11697032	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300010327\|Ga0116246_10079622	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300010338\|Ga0116245_10331266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium	797	Open in IMG/M
3300010344\|Ga0116243_10676164	Not Available	612	Open in IMG/M
3300010351\|Ga0116248_10705163	Not Available	713	Open in IMG/M
3300010352\|Ga0116247_10253659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1430	Open in IMG/M
3300010353\|Ga0116236_10690043	Not Available	830	Open in IMG/M
3300010353\|Ga0116236_10745339	Not Available	791	Open in IMG/M
3300010355\|Ga0116242_10601362	Not Available	990	Open in IMG/M
3300010356\|Ga0116237_11337764	Not Available	591	Open in IMG/M
3300010365\|Ga0116251_10099279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1959	Open in IMG/M
3300010365\|Ga0116251_10638742	Not Available	555	Open in IMG/M
3300010429\|Ga0116241_10284726	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300014206\|Ga0172377_10701208	Not Available	803	Open in IMG/M
3300019239\|Ga0180030_1221040	Not Available	988	Open in IMG/M
3300025677\|Ga0209719_1157220	Not Available	624	Open in IMG/M
3300025713\|Ga0208195_1161793	Not Available	725	Open in IMG/M
3300025713\|Ga0208195_1261121	Not Available	500	Open in IMG/M
3300025737\|Ga0208694_1071550	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1430	Open in IMG/M
3300025748\|Ga0208459_1115304	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300025762\|Ga0208040_1182479	Not Available	749	Open in IMG/M
3300026194\|Ga0209509_1025003	All Organisms → cellular organisms → Bacteria	1838	Open in IMG/M
3300026194\|Ga0209509_1065987	Not Available	903	Open in IMG/M
3300026194\|Ga0209509_1069005	Not Available	875	Open in IMG/M
3300026195\|Ga0209312_1051727	Not Available	1204	Open in IMG/M
3300026195\|Ga0209312_1073680	Not Available	930	Open in IMG/M
3300026198\|Ga0209313_1044515	Not Available	1129	Open in IMG/M
3300026198\|Ga0209313_1065690	Not Available	863	Open in IMG/M
3300026250\|Ga0209612_1013142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3684	Open in IMG/M
3300026250\|Ga0209612_1110783	Not Available	752	Open in IMG/M
3300026252\|Ga0209722_1033943	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300026255\|Ga0209613_1021144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2381	Open in IMG/M
3300026255\|Ga0209613_1057744	Not Available	1170	Open in IMG/M
3300026290\|Ga0209510_1085812	Not Available	1175	Open in IMG/M
3300026290\|Ga0209510_1211978	Not Available	602	Open in IMG/M
3300027851\|Ga0209066_10096973	All Organisms → cellular organisms → Bacteria	1960	Open in IMG/M
3300027851\|Ga0209066_10187433	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300027851\|Ga0209066_10241985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1046	Open in IMG/M
3300028326\|Ga0268263_1000217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	130238	Open in IMG/M
3300028326\|Ga0268263_1000263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	106998	Open in IMG/M
3300028326\|Ga0268263_1000350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	85721	Open in IMG/M
(restricted) 3300028561\|Ga0255343_1334203	Not Available	525	Open in IMG/M
(restricted) 3300028567\|Ga0255342_1104402	All Organisms → cellular organisms → Bacteria	1319	Open in IMG/M
(restricted) 3300028570\|Ga0255341_1056343	All Organisms → cellular organisms → Bacteria	2062	Open in IMG/M
(restricted) 3300028570\|Ga0255341_1315322	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	568	Open in IMG/M
3300028602\|Ga0265294_10849055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	502	Open in IMG/M
3300029311\|Ga0167331_1038500	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300029446\|Ga0167332_1016346	All Organisms → cellular organisms → Bacteria	2164	Open in IMG/M
3300029446\|Ga0167332_1023889	All Organisms → cellular organisms → Bacteria	1583	Open in IMG/M
3300029822\|Ga0134854_1075922	Not Available	630	Open in IMG/M
3300029942\|Ga0168096_1010594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2781	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	89.52%
Environmental	Environmental	10.48%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	53.23%
Bioreactor	Engineered → Bioreactor	31.45%
Aquatic	Environmental → Aquatic	8.87%
Built Environment	Engineered → Built Environment	3.23%
Terrestrial	Environmental → Terrestrial	1.61%
Solid Waste	Engineered → Solid Waste	0.81%
Unclassified	Engineered → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	39.52%
Anaerobic	Engineered → Bioreactor → Anaerobic	30.65%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	12.10%
Freshwater	Environmental → Aquatic → Freshwater	8.87%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	3.23%
Soil	Environmental → Terrestrial → Soil	1.61%
Landfill	Engineered → Solid Waste → Landfill	0.81%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.81%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.81%
Unclassified	Engineered → Unclassified → Unclassified	0.81%
Unclassified	Engineered → Bioreactor → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	39.52%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	30.65%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	8.87%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	8.87%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	3.23%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	3.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	1.61%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.81%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.81%
Dissolved Organics (Anaerobic)	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic)	0.81%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	0.81%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	39.52%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	30.65%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	8.87%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	8.87%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	3.23%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	3.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.61%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.81%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.81%
Activated Sludge	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge	0.81%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	0.81%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	31.45%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	26.61%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	8.87%
Watersheds	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Watersheds	8.06%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	8.06%
Bioreactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Bioreactor	4.03%
Biosolids	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Biosolids	3.23%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	3.23%
Wetland Sediment	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Wetland Sediment	1.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.81%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.81%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.81%
Activated Sludge	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Activated Sludge → Activated Sludge	0.81%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	0.81%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001567	Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, Canada	Engineered	Open in IMG/M
3300001682	Cattle waste upflow reactor	Engineered	Open in IMG/M
3300001865	Microbial communities from bioreactor (seeded with sewage sludge) at LBNL, California, USA - Biofuel metagenome 5	Engineered	Open in IMG/M
3300002498	Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, Canada	Engineered	Open in IMG/M
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered	Open in IMG/M
3300003471	Fe-reducing enrichment culture from wetland. Sample 5 with periodic nitrate additions.	Environmental	Open in IMG/M
3300006033	Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15	Environmental	Open in IMG/M
3300009121	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.A IDBA	Engineered	Open in IMG/M
3300009122	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C13.But.B IBDA	Engineered	Open in IMG/M
3300009360	Syntrophic microbial communities from biogas reactors in Seattle, WA - R1.C12.But.B IBDA	Engineered	Open in IMG/M
3300009362	Syntrophic microbial communities from biogas reactors - R1.C13.But.A IBDA	Engineered	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009647	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA	Engineered	Open in IMG/M
3300009652	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNA	Engineered	Open in IMG/M
3300009656	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA	Engineered	Open in IMG/M
3300009659	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009676	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA6_MetaG	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300009682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG	Engineered	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300009688	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC08_MetaG	Engineered	Open in IMG/M
3300009689	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG	Engineered	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300009694	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW1_MetaG	Engineered	Open in IMG/M
3300009696	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC10_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG	Engineered	Open in IMG/M
3300009767	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS3_MetaG	Engineered	Open in IMG/M
3300009770	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C12 SIP DNA	Engineered	Open in IMG/M
3300009773	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C12 SIP DNA	Engineered	Open in IMG/M
3300009780	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG	Engineered	Open in IMG/M
3300009783	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC052_MetaG	Engineered	Open in IMG/M
3300009838	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC028_MetaG	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010327	AD_CNMVca	Engineered	Open in IMG/M
3300010338	AD_JPMRca	Engineered	Open in IMG/M
3300010344	AD_JPASca	Engineered	Open in IMG/M
3300010351	AD_USPNca	Engineered	Open in IMG/M
3300010352	AD_JPHWca	Engineered	Open in IMG/M
3300010353	AD_USCAca	Engineered	Open in IMG/M
3300010355	AD_USDVca	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010365	AD_USDIca	Engineered	Open in IMG/M
3300010429	AD_USRAca	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300019239	Anaerobic biogas reactor microbial communites from Seattle, Washington, USA - Biogas_R2-A RNA time zero (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025677	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025737	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025748	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025762	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026194	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026195	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026198	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026250	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026252	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026255	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300026290	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027851	Freshwater microbial communities in response to fracking from Pennsylvania, USA - Allegheny Zone_MetaG_DW_15 (SPAdes)	Environmental	Open in IMG/M
3300028326	Microbial communities from bioreactor (seeded with sewage sludge) at LBNL, California, USA - Biofuel metagenome 5 (SPAdes)	Engineered	Open in IMG/M
3300028561 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant16	Engineered	Open in IMG/M
3300028567 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant14	Engineered	Open in IMG/M
3300028570 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant12	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300029311	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP12 - Kappala-digested 113	Engineered	Open in IMG/M
3300029446	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP13 - Kappala-digested 114	Engineered	Open in IMG/M
3300029822	Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T	Engineered	Open in IMG/M
3300029942	Biosolids microbial communities from sewage treatment plant in Sweden - SWESTP8 - Uppsala-digested 109	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_1000123946	3300001567	Hydrocarbon Resource Environments	WNIFDHTDVPEPLWDLQRQGKHSEARRAAIRLTFRHPFRMLPVIISCLNCGRS*
Draft_100052853	3300001567	Hydrocarbon Resource Environments	MNHIFDKTTCWNIFDHSDTPEPLWDPQRQGKHSEARRAAIRLTVKHPLRILPVIISCRRCGRS*
Draft_100056527	3300001567	Hydrocarbon Resource Environments	MDRIFDKSTCWNIFDHADAPEPLWDLQRQGKHSEVRCAAIRLTIRHPLRMLLVIISCIHCGYWEAKHS*
Draft_100419143	3300001567	Hydrocarbon Resource Environments	MNRIFDKXTCWNIFDHTDSPEPLWDLQRQGKHTEARCIAXRLTXRHPLRMLPVIINCLLCXRS*
Draft_100818211	3300001567	Hydrocarbon Resource Environments	MNRIFDKNTCWNIFDHTDSPEPLWDLQRQGKHTEARCIAIRLTLRHPLRMLPVIINCLL
Draft_101964261	3300001567	Hydrocarbon Resource Environments	MNRIFDRTTCWNIFDHTDTPEPLWNLQRQGKHTEARCIAMRLTLRHPLRMLPVIINCLLCSRS*
SAHD_100551355	3300001682	Activated Sludge	MNRIFDKTTCWNIFDHTDSPDPLWDLQRQGKHREAQKAAIRLTLRHPLRMLPVIVNCLRCGRS*
JGI2065J20421_10003165	3300001865	Bioreactor	MKHIFDRTTCWNIFDHAEDPERYWALQRAGLHEKARKAAIRLTLKHPLRMISVIIACARCG*
JGI2065J20421_100033659	3300001865	Bioreactor	MKRIFDKATCWNIFDHAKDPERYWALQHAGLHDAARTAAIFLTLRHPLRMIPVIIACARYG*
TOLCLC_100215297	3300002498	Hydrocarbon Resource Environments	MNRIFEKTTCWNIFDHTDVPEPLWDLQRQGKHSEARRAAIRLTFRHPFRMLPVIISCLNCGRS*
TOLCLC_100226744	3300002498	Hydrocarbon Resource Environments	MNRVFDKNTCWNIFDHTDSPEPLWDLQRQGKHTEARCIALRLTLRHPLRMLPVIINCLLCRRS*
TOLCLC_100226751	3300002498	Hydrocarbon Resource Environments	MNRIFDKNTCWNIFDHTDSPEPLWDLQRQGKHTEARCIAMRLTFRHPLRMLPVIINCLLC
TOLCLC_100310853	3300002498	Hydrocarbon Resource Environments	MNRIFDKTTCWNIFDHTDSPEVLWDLQRQGKHSKARRAAIRLTFRHPLRMLPVIINCLLCRRS*
TOLCLC_104022442	3300002498	Hydrocarbon Resource Environments	VKHIFDKTTCWNIFDHSDTPEPLWELQRQGKYNETRRAAIRLTLKHPLRMLPVIYNCLRCGRF*
draft_101345142	3300002898	Biogas Fermenter	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCNRS*
FeGluNO3_1002300021	3300003471	Wetland Sediment	MKRIFDKTTCWEIFDHTDEPERYWALQRAGLHDAARTAAILLTLRHPLRMIPVIIACARCG*
FeGluNO3_100230015	3300003471	Wetland Sediment	MKHIFDETTCWNIFDHTDGPERYWALQRAGLHDAAQVAALCLTLRHPLRMIPVIIACARCG*
Ga0075012_101509492	3300006033	Watersheds	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHNEARQAAIQLTLRHPLRMLPVIVNCLRCRRF*
Ga0075012_101984174	3300006033	Watersheds	MKHIFDKTTCWNIFDHTDNPEPLWELQRQGKHREARRAAVRLTLRHPIRMLPIIFNSLRIKALI*
Ga0075012_102818372	3300006033	Watersheds	MKHIFDKTTCWNIFDHTDSPERLWDLQRQGKHREAQKTAIRLTLRHPLRMLPVIVNCLRCGRS*
Ga0075012_102969814	3300006033	Watersheds	MRHIFDKTTCWNIFDHAEDPERYWALQRTGLQKEARRAAIRLTLQHPLRMIPVIIACARCR*
Ga0075012_103101652	3300006033	Watersheds	MNRIFDKTTCWNIFDHTDNPEPLWDLQRQGKHRKARRAAIRLTLRHPIRMLTVIVNCLRCGRS*
Ga0075012_105997152	3300006033	Watersheds	MNRIFDKTTCWNIFDHTDKPEPLWNLQRQGRHSEARRAAIRLTFKHPMRMLPVIFNCLRCGRS*
Ga0075012_106876142	3300006033	Watersheds	MRHIFDKTTCWNIFDHANDPERYWALQRAGLHEEACQAAIRLTLRHPLRMIPVIIACVRCG*
Ga0118671_10420994	3300009121	Anaerobic Wastewater Sludge	MNRIFDKTTCWNIFDHTGTPEPLWDLQRQGKHSEARRAAIRLTLLHPFRMLPVIISCLRCNRS*
Ga0118671_10603944	3300009121	Anaerobic Wastewater Sludge	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCNR
Ga0118671_10675433	3300009121	Anaerobic Wastewater Sludge	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAKRLTLKHPLRMLPVIISCIRCASWAARHS*
Ga0118671_10742353	3300009121	Anaerobic Wastewater Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCNR
Ga0118674_10081325	3300009122	Anaerobic Wastewater Sludge	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCNRS*
Ga0118674_10098775	3300009122	Anaerobic Wastewater Sludge	MNRIFDKTTCWNIFDHTDTPEALWDLQRQGKHSDARRAAIRLTLRHPLRMLPVITSCLRCSRY*
Ga0118674_10103133	3300009122	Anaerobic Wastewater Sludge	MNRIFDKGTCWNIFDHTDTPEPFWDLQRQGKHDEARRAAMRLTFRHPLRMLPVIISCIRCASWAARHS*
Ga0118672_10562602	3300009360	Anaerobic Wastewater Sludge	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQEKHNDARRAAIRLTIRHPLRMLPVIISCIRCASWAAKHS*
Ga0118673_10644891	3300009362	Anaerobic Wastewater Sludge	MNRIFDKTTCWNIFDHTDAPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMSCLRCSRY*
Ga0118673_10836051	3300009362	Anaerobic Wastewater Sludge	RIFDKGTCWNIFDHTDTPEPLWDLQRQEKHNDARRAAIRLTIRHPLRMLPVIISCIRCASWAAKHS*
Ga0123327_11415553	3300009607	Anaerobic Biogas Reactor	MKRIFDKGTCWNIFDHTDTPEPLWDLQRQEKHNDARRAAIRLTIRHPLRMLPVIISCIRCASWAAKHS*
Ga0123327_12098342	3300009607	Anaerobic Biogas Reactor	MNRIFDKGTCWNIFDHTDTPEPFWDLQRQGKHDEARRAAMRLTFRHPLRMLPVIISCIRCASWTAKHS*
Ga0123326_11298251	3300009647	Anaerobic Biogas Reactor	SRRRNTMNRIFDKTTCWNIFDHTDTPEALWDLQRQGKHSDARRAAIRLTLRHPLRMLPVITSCLRCSRY*
Ga0123326_11563292	3300009647	Anaerobic Biogas Reactor	MNRIFDKGTCWNIFDHTDTPEPFWDLQRRGKHDEARRAAMRLTFRHPLRMLPVIISCTRCASWAAKHS*
Ga0123330_10556484	3300009652	Anaerobic Biogas Reactor	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAKRLTLKHPLRMLPVIISCICCASWAARHS*
Ga0123330_11497403	3300009652	Anaerobic Biogas Reactor	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIMSCLRCGRS*
Ga0123329_10336816	3300009656	Anaerobic Biogas Reactor	MNRIFDKGTCWNIFDHTDTPEPLWDLQHQGKHDEARRAAKRLTLKHPLRMLPVIISCIRCASWAARHS*
Ga0123328_10964153	3300009659	Anaerobic Biogas Reactor	MNRIFDKTTCWNIFDHTDNPEPLWDLQRQGKHSDARRAAFRITLRHPLRMLPVIVSCLRSSRS*
Ga0116182_10540935	3300009666	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTNTPERYWDLQRQGKHSEARRAAIRLTLRHPIRMLPVIMSCLRCSRS*
Ga0116182_12121403	3300009666	Anaerobic Digestor Sludge	MKRIFDKATCWNIFDHTDTPEPLWDLQRQGKHEKARRAAMRLTLKHPLRMLPVIISCIRCAFWAAKHS*
Ga0116183_11185334	3300009670	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMSCLRC
Ga0123334_11425504	3300009671	Anaerobic Biogas Reactor	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCL
Ga0123334_14095491	3300009671	Anaerobic Biogas Reactor	SRRRNTMNRIFDKTTCWNIFDHTDTPEALWDLQRQGKHSEARRAAIWLTLLHPHRMVPVIISCLRCNRS*
Ga0116187_13381433	3300009676	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMSCLRCNRS*
Ga0123335_11718312	3300009680	Anaerobic Biogas Reactor	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAMRLTFRHPLRMLPVIISCIRCASWTAKHS*
Ga0123335_12507403	3300009680	Anaerobic Biogas Reactor	MNRIFDKTTCWNIFDHTDTPEALWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCGRS*
Ga0116174_101392492	3300009681	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKYSDARRAAIRLTLRHPLRMLPVIVSCLRCNRS*
Ga0116172_102821661	3300009682	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMSCLRCSRS*
Ga0116172_104139672	3300009682	Anaerobic Digestor Sludge	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAIRLTFRYPLRMLPVIISCIRCASWAAKHS*
Ga0116144_104217082	3300009687	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEALWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMCCLRCGRS*
Ga0116176_104119841	3300009688	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDNPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIMSCLRCNRS*
Ga0116186_11477973	3300009689	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEALWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMSCLRCNRS*
Ga0116141_100697623	3300009693	Anaerobic Digestor Sludge	MNHIFDKTPCWNIFDHTDTPEALWDLQRQGKHSEARRAAIKLTLLHPFRMLPVIINCLRCGRS*
Ga0116170_100937134	3300009694	Anaerobic Digestor Sludge	MKRIFDNTTCWNIFDHTDDPERYWALQRAGLHDAARAAAIFLTLRHPLRMVPVIIACA
Ga0116177_106526291	3300009696	Anaerobic Digestor Sludge	MNRVFDKTTCWNIFDHTDTPEALWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIMSCLRCGRS*
Ga0116160_10706524	3300009715	Anaerobic Digestor Sludge	MNRIFDKGTCWNIFDHTDNPEPFWDLQRQGKHDEARRAAKRLALKHPLRMLPVIISCIRCASWAAKHS*
Ga0116160_10811262	3300009715	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIMSCLRCGRS*
Ga0116159_12989701	3300009720	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMSCLRCGRS*
Ga0116161_10394162	3300009767	Anaerobic Digestor Sludge	MYRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAKRLTLKHPLRMLPVIISCIRCASWAAKHS*
Ga0116161_10764974	3300009767	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEALWDLQRQGKHSEARRAAIWLTLLHPHRMVPVIISCLRCNRS*
Ga0123332_12320163	3300009770	Anaerobic Biogas Reactor	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPIIMSCLRCNRS*
Ga0123332_12488583	3300009770	Anaerobic Biogas Reactor	RTATGKHTLWNQEGGTFMNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAKRLTFRHPLRMLPVIISCIRCASWAARHS*
Ga0123332_12533623	3300009770	Anaerobic Biogas Reactor	MNHIFDKTPCWNIFDHTDTPEALWDLQRQGKHSEARRAAIKLTLLHPFRMLPVIISSLRCNRS*
Ga0123332_13086272	3300009770	Anaerobic Biogas Reactor	MEVRTVKHIFDKTTCWNIFDHTDTPEPLWNLQRAGRHSAARRAAILLTLRHPFRMIPVIVACHRGF*
Ga0123333_101202581	3300009773	Anaerobic Biogas Reactor	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIINCLRCGRS*
Ga0123333_102266451	3300009773	Anaerobic Biogas Reactor	NIFDHTDTPEPLWDLQRQEKHNDARRAAIRLTIRHPLRMLPVIISCIRCASWTAKHS*
Ga0116156_104834841	3300009780	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCGRS*
Ga0116158_105391082	3300009783	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAILLTLLHPHRMVPVIISCLRCNRS*
Ga0116153_102189471	3300009838	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDSPEPLWGLQRQGKHSEARRVAIDLTLRHPLRMLPVI
Ga0131077_116970322	3300009873	Wastewater	MKRIFDNTTCWNIFDHTDDPERYWALQRAGLYDAARAAAILLTLRHPLRMIPVIIACARCG*
Ga0116246_100796222	3300010327	Anaerobic Digestor Sludge	MKRIFDNTTCWNIFDHTDDPERYWALQRVGLHDAARTAAILLTLRYPLRMIPVIIACARCG*
Ga0116245_103312663	3300010338	Anaerobic Digestor Sludge	MKRIFDKTTCWNIFDHTDDPERYWALQRVGLHDAALTAAIRLTLRHPLRMIPVIIACARFG*
Ga0116243_106761641	3300010344	Anaerobic Digestor Sludge	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCGRS*
Ga0116248_107051631	3300010351	Anaerobic Digestor Sludge	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAKRLTLKHPLRMLPVIISCIRCASWAAKHS*
Ga0116247_102536593	3300010352	Anaerobic Digestor Sludge	YIMKRIFDNTTCWNIFDHTDDPERYWALQRAGLHDAARTAAICLTLRHPLRMIPVIIACARS*
Ga0116236_106900433	3300010353	Anaerobic Digestor Sludge	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVILCCL
Ga0116236_107453391	3300010353	Anaerobic Digestor Sludge	MNHIFDKTPCWNIFDHTDTPEALWDLQRQGKHSEARRAAIKLTLLHPFRMLPVIISC
Ga0116242_106013623	3300010355	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIWLTLLHPHRMVPVIISCLRCNRS*
Ga0116237_113377641	3300010356	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDSPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMCCLRCGRS*
Ga0116251_100992794	3300010365	Anaerobic Digestor Sludge	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAKRLTLKHPLRMLPVIISCIRCAFWAARHS*
Ga0116251_106387422	3300010365	Anaerobic Digestor Sludge	MNRIFDKGICWNIFDHTDTPEPLWDLQRQGKHDEARRAAIRLTFRHPLRMLPVIISCIRCGYWAARHS*
Ga0116241_102847263	3300010429	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDSPEPLWDLQRQGKHSEARRVAIDLTLRHPLRMLPVILCCLRCGRS*
Ga0172377_107012082	3300014206	Landfill Leachate	MNRIFDMTTCWNIFDHTDAPEPLWDLQRQGKHSETRRAAIRLTLRHPLRMLPVIISCRRRGRF*
Ga0180030_12210402	3300019239	Anaerobic Biogas Reactor	MNRIFDKTTCWNIFDHTDAPEALWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIISCLRCNR
Ga0209719_11572202	3300025677	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMSCLRCGRS
Ga0208195_11617932	3300025713	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIVSCLRCNRS
Ga0208195_12611212	3300025713	Anaerobic Digestor Sludge	MKRIFDKATCWNIFDHTDTPEPLWDLQRQGKHEKARRAAMRLTLKHPLRMLPVIISCIRCAFWAAKHS
Ga0208694_10715503	3300025737	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIMSCLRCGRS
Ga0208459_11153043	3300025748	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCNRS
Ga0208040_11824793	3300025762	Anaerobic Digestor Sludge	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAFRITLRHPLRMLPVIVSCLRCNRS
Ga0209509_10250032	3300026194	Anaerobic Biogas Reactor	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQEKHNDARRAAIRLTIRHPLRMLPVIISCIRCASWAAKHS
Ga0209509_10659872	3300026194	Anaerobic Biogas Reactor	MNRIFDKTTCWNIFDHTDTPEALWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCGRS
Ga0209509_10690051	3300026194	Anaerobic Biogas Reactor	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPIIMS
Ga0209312_10517273	3300026195	Anaerobic Biogas Reactor	MKRIFDKGTCWNIFDHTDTPEPLWDLQRQEKHNDARRAAIRLTIRHPLRMLPVIISCIRCASWAAKHS
Ga0209312_10736804	3300026195	Anaerobic Biogas Reactor	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPV
Ga0209313_10445153	3300026198	Anaerobic Biogas Reactor	MNRIFDKTTCWNIFDQTDSPEPLWDLQRQGKHSEARRAAIRLPLRHPLRMLPVILCCLRCSHSRINRHSRPVHRPAER
Ga0209313_10656902	3300026198	Anaerobic Biogas Reactor	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIVSCLRCSRY
Ga0209612_10131425	3300026250	Anaerobic Biogas Reactor	MNRIFDKTTCWNIFDHTDTPEALWDLQRQGKHSDARRAAIRLTLRHPLRMLPVITSCLRCSRY
Ga0209612_11107832	3300026250	Anaerobic Biogas Reactor	MNRIFDKTTCWNIFDHTGTPEPLWDLQRQGKHSEARRAAIRLTLLHPFRMLPVIISCLRCNRS
Ga0209722_10339434	3300026252	Anaerobic Biogas Reactor	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCNRS
Ga0209613_10211445	3300026255	Anaerobic Biogas Reactor	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLRCGRS
Ga0209613_10577444	3300026255	Anaerobic Biogas Reactor	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAKRLTFRHPLRMLPVIISCIRCASWAARHS
Ga0209510_10858124	3300026290	Anaerobic Biogas Reactor	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIVSCLR
Ga0209510_12119781	3300026290	Anaerobic Biogas Reactor	MNRIFDKGTCWNIFDHTDTPEPFWDLQRQGKHDEARRAAMRLTFRHPLRMLPVIISCIRCASWTAKHS
Ga0209066_100969732	3300027851	Watersheds	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHNEARQAAIQLTLRHPLRMLPVIVNCLRCRRF
Ga0209066_101874332	3300027851	Watersheds	MNRIFDKTTCWNIFDHTDNPEPLWDLQRQGKHRKARRAAIRLTLRHPIRMLTVIVNCLRCGRS
Ga0209066_102419851	3300027851	Watersheds	MKHIFDKTTCWNIFDHTDNPEPLWELQRQGKHREARRAAVRLTLRHPIRMLPIIFNSLRIKALI
Ga0268263_10002175	3300028326	Bioreactor	MKRIFDKATCWNIFDHAKDPERYWALQHAGLHDAARTAAIFLTLRHPLRMIPVIIACARY
Ga0268263_10002635	3300028326	Bioreactor	MKRIFDKTTCWNIFDHAKDPECYWALQHAGLHDAARTAAIYLTLRHPLRMIPVIIACARS
Ga0268263_100035087	3300028326	Bioreactor	MKHIFDRTTCWNIFDHAEDPERYWALQRAGLHEKARKAAIRLTLKHPLRMISVIIACARC
(restricted) Ga0255343_13342032	3300028561	Wastewater	TMNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMSCLRCGRS
(restricted) Ga0255342_11044023	3300028567	Wastewater	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIMSCLRCGRS
(restricted) Ga0255341_10563434	3300028570	Wastewater	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSEARRAAIKLTLLHPFRMLPVIISCLRCNRS
(restricted) Ga0255341_13153221	3300028570	Wastewater	CWNIFDHTDTPEPLWDLQRQGKHSEARRAAIRLTLRHPLRMLPVIMSCLRCGRS
Ga0265294_108490552	3300028602	Groundwater	MNRIFDMTTCWNIFDHTDAPEPLWDLQRQGKHSETRRAAIRLTLRHPLRMLPVIISCRRRGRF
Ga0167331_10385003	3300029311	Biosolids	MNRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIMSCLRCNRS
Ga0167332_10163463	3300029446	Biosolids	MNRIFDKGTCWNIFDHTDTPEPLWDLQRQGKHDEARRAAKRLTLKHPLRMLPVIISCIRCASWAARHS
Ga0167332_10238893	3300029446	Biosolids	MNHIFDKTTCWNIFDHTDTPEALWDLQRQGKHSEARRAAIKLTLLHPFRMLPVIISCLRCNRS
Ga0134854_10759223	3300029822	Fermentation Pit Mud	MYRIFDKGTCWNIFDHTDSPEPLWDLQRQGKHDEARRAAKRLTLKHPLRMLPVIISCIRCASWAAKHS
Ga0168096_10105946	3300029942	Biosolids	MKRIFDKTTCWNIFDHTDTPEPLWDLQRQGKHSDARRAAIRLTLRHPLRMLPVIMSCLRCNRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters