3300002498: Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, Canada

Overview

Basic Information

• IMG/M Taxon OID: 3300002498
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0047444 | Gp0053498 | Ga0010764
• Sample Name: Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, Canada
• Sequencing Status: Permanent Draft
• Sequencing Center: McGill University
• Published?: Y
• Use Policy: Open

Dataset Contents

• Total Genome Size: 736029846
• Sequencing Scaffolds: 46
• Novel Protein Genes: 56
• Associated Families: 42

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Archaea → Euryarchaeota	4
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium GWA2_32_17	1
Not Available	14
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Salegentibacter → Salegentibacter salarius	1
All Organisms → cellular organisms → Bacteria	7
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2
All Organisms → cellular organisms → Bacteria → Atribacterota → unclassified Atribacterota → Candidatus Atribacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	1
All Organisms → cellular organisms → Bacteria → Synergistetes → unclassified Synergistota → Synergistetes bacterium ADurb.BinA166	1
All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Hydrocarbon Resource Environments Microbial Communities From Canada And Usa
• Type: Engineered
• Taxonomy: Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments → Hydrocarbon Resource Environments Microbial Communities From Canada And Usa

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Water (non-saline)

Location Information

• Location: Northern Alberta, Canada
• Coordinates
  • Lat. (^o): 54.0
  • Long. (^o): -114.0
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F003987	Metagenome / Metatranscriptome	458	Y
F007838	Metagenome / Metatranscriptome	344	Y
F014212	Metagenome	265	Y
F017851	Metagenome / Metatranscriptome	238	Y
F019675	Metagenome	228	Y
F019676	Metagenome / Metatranscriptome	228	Y
F028047	Metagenome	193	Y
F029922	Metagenome / Metatranscriptome	187	Y
F030486	Metagenome / Metatranscriptome	185	Y
F032323	Metagenome	180	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
TOLCLC_10000051	All Organisms → cellular organisms → Archaea → Euryarchaeota	60049
TOLCLC_10000075	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa	21741
TOLCLC_10000511	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium GWA2_32_17	2357
TOLCLC_10001010	Not Available	37961
TOLCLC_10001150	All Organisms → cellular organisms → Archaea → Euryarchaeota	32167
TOLCLC_10003133	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Salegentibacter → Salegentibacter salarius	1379
TOLCLC_10004143	All Organisms → cellular organisms → Bacteria	8908
TOLCLC_10004601	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon	5832
TOLCLC_10005145	All Organisms → cellular organisms → Archaea → Euryarchaeota	2211
TOLCLC_10005379	Not Available	2547

Sequences

Scaffold ID	Protein ID	Family	Sequence
TOLCLC_10000051	TOLCLC_1000005127	F035532	MSFDPISFLANVERIFSAATGLSDVKSWTRPTKLTTTFETPEVAIEMIAGSMDSISLSYPNRQIEFYVRFVIFEEQTSSASKIGTIYSGIIDAVRSNPDLRTKSGSATCDYFGTFYGRNISFDLAATQRNGVSVNAMKIDVPCLVREI*
TOLCLC_10000075	TOLCLC_1000007533	F029922	LEKSIEFIDKKDWEMLPMLSREELYGFEIFDISEMIMSIEHAIDYTEGYRFLFLCFGSEESSEKAKAVMKILEDYLQIVKDVYRFKMAEKKKRENFLKGVNA*
TOLCLC_10000075	TOLCLC_100000754	F070633	VSHYLQLGPNKCKGDYNLVVVPISDGILTSIERDNFSIAMDTEGRLILTRKDRKVQLVFDYEKGFMTGVLGGILYDTFEIPKQEGTDYHG*
TOLCLC_10000075	TOLCLC_100000755	F053881	MSGLLKISKESLGEKERKLYLKLYKHIIESFEIDELAADQIALALISQKCILLPRLLSGEDIDINQTSESIRKWLAEYRLTPKSREKEKEVTINLSAIIEEIHRERDNPN*
TOLCLC_10000511	TOLCLC_100005113	F074913	SWRRVAVARVFALVVRCRVMRLLLYSRVGKNRDTRRGTPTGAGAGRGVIHKTATLVTQLSRHGAPIAYTDLLATVF*
TOLCLC_10001010	TOLCLC_1000101039	F053881	MTGLLKISKESLGEKERKLYSKLYRHIIESFEIDELGADQISLALVCQKCILLPRLLSGEDVDINQVSESIRKWLSEYRLTPKSREKEKEVTINLSAIIEEIHRERENPN*
TOLCLC_10001010	TOLCLC_1000101040	F070633	ILGGRDTGLRDRAKSRLVLDVSHSQSDEGFVYSVRQHLPLGPKKCTGGFNLVVVPLSDGILTSIDRDNFNVAVDTEGRLILTRLDRKIQLVFDYDKGFMTGVLGGVLYDTFEIPKHEGTDYHG*
TOLCLC_10001150	TOLCLC_1000115026	F054063	MSVDRKLRFTQVIMNAWLYGVESTANVFFDRPKLFYRKWGTMAIRPFIESWGELGMEFQKGLSPYNTVKMFIDALVTAQFFNPDDFEFAGDDKNFTFKAIQCPYKFHCKKLIGEQKEIACLRAITLLGALDYNIEGESLKYKYNFEFNENAPCLVSFERFKD*
TOLCLC_10003133	TOLCLC_100031331	F030486	ANVRRYVQLAQSRGGACFCTRGAMQDHADITLFSRWQKP*
TOLCLC_10004143	TOLCLC_100041438	F095527	MNKTMKISLLILIPALLIMALPIGILSEDYETATTSAISYLERIDPENPYLLLAKDTAITNPKMSINFALKGIIESENGKKEDNLNKALEIMSSLKIIPEDRKDMFNVLILEYNLTRSQKYIEDSAKASNLRYLANSGEYLKQANEDLNEINGNGLEETEAKLKKIAETYMNRSSNYSNLYKEMALISYDENRYLATTLFSIYAKNDNQSFDESLDVILTRFENEWNSFFGSGAYKDSPFSPDSLKELQRKAINYRGEGNEDFAN
TOLCLC_10004601	TOLCLC_100046017	F070633	LRDRAKNRLVLDVSHSQGDEGFVYSVRQHLPLGPKKCTGGFNLVVVPLSDGILTSIDRDNFNVAVDTEGRLILTRLDRKIQLVFDYDKGFMTGVLGGVLYDTFEIPKHEGTDYHG*
TOLCLC_10005145	TOLCLC_100051454	F029922	LAKSIDLMEKRQMDLLPTLSREELYGFGIIDISEMIMSIEHAINYAEGYRFLLLCFGNEGSSDKAKMIMKGLEDYLEIVKDVYRFKVNEKKRKENFFMGEIC*
TOLCLC_10005379	TOLCLC_100053792	F007838	MLLLFIMTCEIYGQVPAGITVVVKNPSWQAEDAAKESLEKADRIRQITTLTEQVNTQKESLQAIRDATEKLRKINRKVANYHNLELAIAQVSDSYTRVLGSLKAIDEHNCFKPSEYHMLSESMMGLLSQTSYSITTLTVVLTDNFSEMSDGERLLNMNQAIKELRENLGVINSAIIEVEILDNQRMQLRTLNYINSIFK*
TOLCLC_10013770	TOLCLC_1001377085	F070634	MESTIIRESTNRRGPHIICVLEFDTGEILMRIDDNRTGIQEDIALREYINAYEVYYDFDQGWMANGQEIPYKDSF*
TOLCLC_10014078	TOLCLC_1001407846	F070634	RAKDREKGAIMESTIIRESTMRRGPHIICVLEFDTGEILMRIDDNRTGIQEDIALREYINAYEVYYDFDQGWMANGQEIPYKDSF*
TOLCLC_10017668	TOLCLC_100176681	F043160	MAKKNFDNLKNSHLGGGLSNLIPEMNNEQESKKPKVVYKDVPKTFLMVLEDYEYLQTYSRYMAFHSNSKYPLKRSLSDAIKLLREAHPEIQ*
TOLCLC_10021529	TOLCLC_100215297	F069434	MNRIFEKTTCWNIFDHTDVPEPLWDLQRQGKHSEARRAAIRLTFRHPFRMLPVIISCLNCGRS*
TOLCLC_10022674	TOLCLC_100226743	F070634	MPSTILRESTVRKGRHIISVLEFESGDIVMYVDDNRTGIKEDIQLREYINAYEVYYDLDQGWMANGQEIPYKDSF*
TOLCLC_10022674	TOLCLC_100226744	F069434	MNRVFDKNTCWNIFDHTDSPEPLWDLQRQGKHTEARCIALRLTLRHPLRMLPVIINCLLCRRS*
TOLCLC_10022675	TOLCLC_100226751	F069434	MNRIFDKNTCWNIFDHTDSPEPLWDLQRQGKHTEARCIAMRLTFRHPLRMLPVIINCLLC
TOLCLC_10027659	TOLCLC_100276592	F048134	MNEEKKSQINLAIPERYRNLLRRMAAERMMENPAEIVSGTSIATEILVTALQEIAGENKKERGRENE*
TOLCLC_10031085	TOLCLC_100310853	F069434	MNRIFDKTTCWNIFDHTDSPEVLWDLQRQGKHSKARRAAIRLTFRHPLRMLPVIINCLLCRRS*
TOLCLC_10031085	TOLCLC_100310854	F070634	MSSTILRESTVRKGRHIISVLEFESGDIVMYVDDNRTGIQEDIALREYINAYEVYYDLDQGWMAYGQEIPYKDSF*
TOLCLC_10031365	TOLCLC_100313654	F037999	LFVFGKFSEMPMAERVKLMKDPAELIDYVRKESHVIWKAVEAFFRRENREGRDVLIEGVAILPELMSRLEDIPHRVVFIGNQGENHQENIKKFAEENEHDWMGGESDQYISAYAMFVKRMSAYIEQEAKKHGLDYIEMDKKLFGDVTEAVMKSLGLSTWTSIRSISSGG*
TOLCLC_10032350	TOLCLC_100323505	F080212	MRITARQQMAVHQAQAQALCWLLQQPLGAGGEVLAGLTRTLAFGRPLSGAEWAAMPPADRERESRAFHARVLRLFRRGLTIRCPIVARVVPTPRGMQVERFRDAKGPDQGLLRLLEARGDRLRRCQLCGAWFWRERKRTYCGPCFQSGTARSKVHRAKAKAARAGRILRGETGLDGRIASTPESG*
TOLCLC_10040943	TOLCLC_1004094315	F032553	LERLAGVTVLSVDRSKHQARVRVEEGTTSPDQVVAAIQEAGRFQAKPA*
TOLCLC_10050218	TOLCLC_1005021811	F088355	MKNLSNKLNVFAGQKGQLVVAILTIALFVLAAGAPNATIGIGR*
TOLCLC_10050218	TOLCLC_100502187	F088355	MKNITNKISVFAGQKGQLVVAILTIALFVLAAGAPNATIGIGR*
TOLCLC_10064836	TOLCLC_100648366	F056198	SNLTVKLGIFFSQKAVTVQGGYGALFAVRVQILLSITRVAVQV*
TOLCLC_10087803	TOLCLC_100878036	F059711	MRNRIYHTSINLLIEPEMYQRIKMIATLQKTTMSKIIRESIKLWLSRYDKENNSITTENSTDEEE*
TOLCLC_10093896	TOLCLC_100938961	F019676	MKKHMFVSCVAAFTLALTFTLVGCDRKVSETKSSSVSSDGTVRSKEKTVTQAADGTVTKTEESKK
TOLCLC_10100615	TOLCLC_101006151	F055311	MAEDLLDYWVRLIKTIFPANAWINSRFSNNDYLIQIDWKLQNDSENPAKRSPKIEIIIKEGAINDYIDKNREDRDVSDILLKEFICGRYHQSITDDEVDARPHASTKAWLISRDVLNCKPPFEARKSG*
TOLCLC_10105969	TOLCLC_101059691	F017851	VTSAASQQFFDTFPPEVAQGILEGDRLRVHAAKVSVVRDGSGVAFAIDTLPRDGRPLEWERITRKICKILKSEVERLPAGTKRALAAAAHLLPADEPILLFQVDTWLSMQDDGGSWWEVPGYLSLMGIALPDVIKASERAKKRVLREVCKL*
TOLCLC_10106351	TOLCLC_101063511	F028047	MESDMKEAIFRNDWHQLGEKQIVDLFNEHFTGVTIQPGESIIKRLKMMEVCTLEILEDRSTSTVYRIRQTDEVFHVFQPDGKLLSYTTEEYYLQKPIDELVKEYSKKDPIFKIEKVSDFKEIIHHLKSPKFRALFVDGTYDKMEWIDQPSEDITQIEKLMKKMGAFYTSYVKK*
TOLCLC_10120317	TOLCLC_101203171	F086617	MAXXXXXXXXXXKASITVDVPLEFADLEWSEFMLQSLLSGYTRGLTDVEPLIDEDDMKAGKVDLTTEGDRLVNVAVELDYTPRTKDTADEEVARAQATLERDLEKYRLFVLDRCEKLQCRTE*
TOLCLC_10123478	TOLCLC_101234781	F073228	KYGEFLYKIVMVFPHNMEVDKTELARLIKISNNTLTFERKNGENFTIDERDIEHMDLFRSPNYRGGE*
TOLCLC_10125391	TOLCLC_101253911	F019675	LGMRRTRQTIAIVTGLLGVLLIVRGVAGGVWPLSLQLIAGVALVVVAVLRWRMLG*
TOLCLC_10129788	TOLCLC_101297884	F070634	MESTIVRESTVKRGPHIICVLEFDTGELLMRVDDTRCGIQEDIALREYINAYEVYYDFDHGWMINGQEIPYRDCF*
TOLCLC_10142032	TOLCLC_101420321	F103842	GKTVPELLDKINEFTKQYSVGNIFDVSIMEVLDKQIETDEKKYDNNGRVEVSDRIKISTFEYSYYAIVLILIEE*
TOLCLC_10165052	TOLCLC_101650521	F092294	MTRGDIPHSNVFANLHDVTLQRLDVYQTNNGHPVFYDSAHFAPSVDLWNTVPVIYVTTEPGTPAQHPRPEDIANGTLPPQFRPVGSVSRANLPQSGEPALRGAVAFSDPEIEALAAAGKLSLSTGFSSPEAPDPGRPGATRIAGNVTPNHVLVFERGACPNCFPNDNGAT
TOLCLC_10175507	TOLCLC_101755074	F042954	MEDIQVRNGLYGFEFRDRDMRRVEERKTYDCKQLWQRNHEIVNLTAQGFKQVEVAEILGITPQTVSNTLNGELGQRKLSELRREKDEDAKKTVEKIRVLTNKALQVYHEIFDNESGEATLKERKDVADTVVLELSGLRAPTKIQSTSVSTVLTAEELAVFRERGLRAARQMGVVIDV
TOLCLC_10184942	TOLCLC_101849422	F014212	MKIRLILAFLIISVSAGAQLIHVEGSKALGINYAYVKNGFNVSSRITFYKNNNLAFRGSIDFERVRFDLSKVSIVYANPELMYTFYNPGDKLFFNVKGGVLTGAEFISNSILDKKKSQFFVGENIGLSAEYFISNKIMLNLDFDQRFLQMSKVGKASFIIQLGINYNF*
TOLCLC_10194900	TOLCLC_101949003	F097599	GATFHNLQETDMDDESKGLLKTIADALTRAPATQHDNLAEMTNLKQELATKTTEFENLKQELATLKAAQETAKKDAEWDVMKANLPAGWLGAKEAETRKEYEAAPGAFALKVVAFKNTQPGEKAAEGSGVGQSADGAESTEEQQFANMAAEFEKRLGIKVV*
TOLCLC_10196473	TOLCLC_101964732	F051949	MLTDAGTARLDLFTDSLMLEVGDDLFLAPLDKLSALMQCRASFCQLSRRYIGTGGHYLDAVQGIGLRRSKTGSALLFIERGALYSLPVVELREVLHGVRSSCRISRALTTTEILRVAGVAA*
TOLCLC_10202270	TOLCLC_102022701	F100850	KVDIDNDRDNDNVKIIKKVYKRDNSCPTQSDSIQLKGKILPKGVIVLADFEPCELKDGRATLNIPTNPNLKFVVLSIDKKGNDHDGAIVTKQKIQSLSKNTGLYVVNFDDKMTGIDPVTGKKKTLDEINGLALYNTATKSLDFKSGNSLALTAVLKK*
TOLCLC_10213322	TOLCLC_102133222	F076128	MFIEILVLLIFLVASLYLAYQFRSCGHQMGILQGSNASLSADLEKTREENIKLVAELQKTRVDLALTRGELEKTRAALNSCTDAINGGS*
TOLCLC_10257908	TOLCLC_102579082	F080313	MLDRPTIMVVDDEPTALASMLDALTRRFGGDYRIEPHLSPP
TOLCLC_10275332	TOLCLC_102753322	F003987	MIPALPCGTFADSATPPGAFYIAAFEEGDAPHHVGEYRIDVAIQALQALKACGYDDVEVGSIERGDRVHLLLIGLDGEARFGDISPGCVAVAPVGVQE*
TOLCLC_10277070	TOLCLC_102770701	F065906	MSKPLTPDEEVVFRELVRLDVEPHHIPAELFEGFMERLAESSNLPLDRARRAIHGLIDRGIFDAGEEGEEERVQKDREIIRDLLLHDPEIQELLKKIVAEIVQTSLK*
TOLCLC_10298128	TOLCLC_102981282	F032323	MSYLVLRLKNDTALKFRLLHSVLNGDPSYSVKEYREEPDPLDNNYQIISFTAYEKGPYSPIRKILKEFIKNNEVEYLNESSADRSM*
TOLCLC_10339921	TOLCLC_103399211	F048149	MIISYERSLEENINEGIKTLEYHISSQNYPIVNEMLQLQIETLQWVLNKQKKENSLESLKQIINFKVKRLEYELKKIARRDIEHTSKIVYQLEMLECCKIIINWDLQRRTKTKTTKEDSISALC*
TOLCLC_10369923	TOLCLC_103699231	F042655	MREFEVTIPQAYMNFINKEIKKPKRLNTELLELWLEKELDLENPGSYGNLPTDESHITVQTLPNGNYRLTISDLCFGMIVSHVQPEPHSRRKLTDEDILRCWLEIKIEEDETEHRIKVKELT*
TOLCLC_10402244	TOLCLC_104022441	F070634	VTNDILKESSVRKGRHIITVLEFQSGEVMMYVDDSKTGIKEDIALREYINAYEIYY
TOLCLC_10402244	TOLCLC_104022442	F069434	VKHIFDKTTCWNIFDHSDTPEPLWELQRQGKYNETRRAAIRLTLKHPLRMLPVIYNCLRCGRF*
TOLCLC_10438187	TOLCLC_104381871	F043481	MSKEIKLERGVRGYNIVKTKCPNCEAEFLFKIHKDTVHDVAGEGMYYPEENVVRCKICMSTFKYQYESK*
TOLCLC_10445290	TOLCLC_104452902	F058179	MTSTEIIAMLVWYAFIAAGIALIYLLSTMLSDAATLSMTGSCAGQGFSNITIEADLLMASINQTVNGTTWQIWGAPV*