Metagenome Family F067546

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F067546
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	97 residues
Representative Sequence	MTPVAARRSPVTVRSVGAAVVLELADLLDASTGVALVAAAEAALTTDPERVDIDLRSLQSWTQEGAVALVRCREICGDLPDGLHYRTGRGPGRAALLAAYT
Number of Associated Samples	80
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.72 %
% of genes near scaffold ends (potentially truncated)	24.80 %
% of genes from short scaffolds (< 2000 bps)	78.40 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (89.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (38.400 % of family members)
Environment Ontology (ENVO)	Unclassified (33.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (37.600 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.68% β-sheet: 19.38% Coil/Unstructured: 51.94%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.84
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.84
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
c.13.2.1: SpoIIaa-like	d1vc1a_	1vc1	0.78
c.13.2.1: SpoIIaa-like	d1vc1a_	1vc1	0.78
c.14.1.2: ClpP/crotonase	d1fc6a4	1fc6	0.75
c.14.1.2: ClpP/crotonase	d1fc6a4	1fc6	0.75
c.13.2.1: SpoIIaa-like	d1th8b_	1th8	0.74
c.13.2.1: SpoIIaa-like	d1th8b_	1th8	0.74
c.14.1.3: ClpP/crotonase	d4qiia_	4qii	0.73
c.14.1.3: ClpP/crotonase	d4qiia_	4qii	0.73
c.14.1.0: ClpP/crotonase	d3i47a1	3i47	0.72
c.14.1.0: ClpP/crotonase	d3i47a1	3i47	0.72

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00459	Inositol_P	32.80
PF00072	Response_reg	28.80
PF00486	Trans_reg_C	5.60
PF01212	Beta_elim_lyase	3.20
PF02585	PIG-L	1.60
PF00672	HAMP	1.60
PF00293	NUDIX	1.60
PF02518	HATPase_c	1.60
PF00919	UPF0004	0.80
PF11992	TgpA_N	0.80
PF00370	FGGY_N	0.80
PF02668	TauD	0.80
PF10646	Germane	0.80
PF00440	TetR_N	0.80
PF00485	PRK	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	6.40
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	3.20
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	3.20
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	3.20
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	3.20
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	3.20
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	3.20
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	3.20
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	3.20
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	3.20
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	3.20
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	3.20
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	3.20
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	3.20
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	3.20
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	3.20
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	3.20
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.60
COG0621	tRNA A37 methylthiotransferase MiaB	Translation, ribosomal structure and biogenesis [J]	0.80
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.60 %
Unclassified	root	N/A	10.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.60 %
Unclassified	root	N/A	10.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.60 %
Unclassified	root	N/A	10.40 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	84.80 %
Unclassified	root	N/A	10.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	84.00 %
Unclassified	root	N/A	10.40 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	39.20 %
Unclassified	root	N/A	10.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	27.20 %
Unclassified	root	N/A	10.40 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	9.60 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.40 %
Acidothermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales	0.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	27.20 %
Unclassified	root	N/A	10.40 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples	8.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.80 %
Acidothermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae	0.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	27.20 %
Unclassified	root	N/A	10.40 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	8.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.80 %
Acidothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus	0.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	27.20 %
Unclassified	root	N/A	10.40 %
uncultured Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	8.80 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.40 %
Acidothermus cellulolyticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus → Acidothermus cellulolyticus	0.80 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8937053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0548426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300000787\|JGI11643J11755_11183319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	569	Open in IMG/M
3300000890\|JGI11643J12802_10609188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Acidothermales → Acidothermaceae → Acidothermus → Acidothermus cellulolyticus	1555	Open in IMG/M
3300003312\|P12013IDBA_1000318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33631	Open in IMG/M
3300003313\|P32013IDBA_1000985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	18623	Open in IMG/M
3300003315\|P22013IDBA_10003447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9833	Open in IMG/M
3300004157\|Ga0062590_101804932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	627	Open in IMG/M
3300004480\|Ga0062592_102448908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	524	Open in IMG/M
3300004643\|Ga0062591_100789954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	874	Open in IMG/M
3300004643\|Ga0062591_101827348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	621	Open in IMG/M
3300005286\|Ga0065721_10251485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300006048\|Ga0075363_101012848	Not Available	512	Open in IMG/M
3300006051\|Ga0075364_11070041	Not Available	548	Open in IMG/M
3300006801\|Ga0079223_10800977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	596	Open in IMG/M
3300006876\|Ga0079217_10530836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300007004\|Ga0079218_12309895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300007521\|Ga0105044_10008336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14223	Open in IMG/M
3300009084\|Ga0105046_10408004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1366	Open in IMG/M
3300009095\|Ga0079224_100021213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9233	Open in IMG/M
3300009095\|Ga0079224_102275066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	771	Open in IMG/M
3300009120\|Ga0117941_1181063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	579	Open in IMG/M
3300011200\|Ga0137471_100114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	2637	Open in IMG/M
3300012045\|Ga0136623_10184613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	898	Open in IMG/M
3300012188\|Ga0136618_10001049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10385	Open in IMG/M
3300012527\|Ga0136633_1008537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5796	Open in IMG/M
3300012530\|Ga0136635_10006868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3530	Open in IMG/M
3300012531\|Ga0136640_10167356	Not Available	961	Open in IMG/M
3300012684\|Ga0136614_11102624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300012901\|Ga0157288_10178750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	659	Open in IMG/M
3300015064\|Ga0167641_117916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300015163\|Ga0167665_1025315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1168	Open in IMG/M
3300015371\|Ga0132258_10142351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5739	Open in IMG/M
3300015371\|Ga0132258_11124019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1986	Open in IMG/M
3300015373\|Ga0132257_101552822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300015374\|Ga0132255_102315925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300017540\|Ga0180217_1000252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	100449	Open in IMG/M
3300017540\|Ga0180217_1003629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12882	Open in IMG/M
3300017646\|Ga0182737_1132558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	569	Open in IMG/M
3300017787\|Ga0183260_10072671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2519	Open in IMG/M
3300017787\|Ga0183260_10203149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1388	Open in IMG/M
3300017787\|Ga0183260_10664316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	663	Open in IMG/M
3300017789\|Ga0136617_10856929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300017789\|Ga0136617_10994505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300018031\|Ga0184634_10202575	Not Available	903	Open in IMG/M
3300018077\|Ga0184633_10476997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	610	Open in IMG/M
3300018422\|Ga0190265_10005773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8792	Open in IMG/M
3300018422\|Ga0190265_10635575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1187	Open in IMG/M
3300018422\|Ga0190265_10754292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1095	Open in IMG/M
3300018422\|Ga0190265_11618233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	759	Open in IMG/M
3300018422\|Ga0190265_13525719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	522	Open in IMG/M
3300018429\|Ga0190272_10079451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2024	Open in IMG/M
3300018429\|Ga0190272_10281629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1273	Open in IMG/M
3300018429\|Ga0190272_11274087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	729	Open in IMG/M
3300018429\|Ga0190272_11780097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	642	Open in IMG/M
3300018429\|Ga0190272_11793241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	640	Open in IMG/M
3300018432\|Ga0190275_10664577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1096	Open in IMG/M
3300018432\|Ga0190275_10674969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1088	Open in IMG/M
3300018432\|Ga0190275_13562576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	504	Open in IMG/M
3300018465\|Ga0190269_10002166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9171	Open in IMG/M
3300018465\|Ga0190269_10014872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3495	Open in IMG/M
3300018465\|Ga0190269_10020668	All Organisms → cellular organisms → Bacteria	2962	Open in IMG/M
3300018465\|Ga0190269_10043911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2050	Open in IMG/M
3300018465\|Ga0190269_10046297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1998	Open in IMG/M
3300018465\|Ga0190269_10234068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300018465\|Ga0190269_10433453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300018465\|Ga0190269_10602441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	743	Open in IMG/M
3300018466\|Ga0190268_11275672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	617	Open in IMG/M
3300018466\|Ga0190268_11277502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	617	Open in IMG/M
3300018466\|Ga0190268_11514257	Not Available	584	Open in IMG/M
3300018469\|Ga0190270_10016571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4408	Open in IMG/M
3300018469\|Ga0190270_11683345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	688	Open in IMG/M
3300018469\|Ga0190270_12633122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	565	Open in IMG/M
3300018469\|Ga0190270_13224574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	517	Open in IMG/M
3300018476\|Ga0190274_10941295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	934	Open in IMG/M
3300018481\|Ga0190271_10242859	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300018481\|Ga0190271_10763361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1091	Open in IMG/M
3300018481\|Ga0190271_11180179	Not Available	888	Open in IMG/M
3300018481\|Ga0190271_11357292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	830	Open in IMG/M
3300018481\|Ga0190271_11844759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300018481\|Ga0190271_13263030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300019377\|Ga0190264_10155387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1187	Open in IMG/M
3300019377\|Ga0190264_10290257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M
3300019377\|Ga0190264_11464925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	590	Open in IMG/M
3300019377\|Ga0190264_12193271	Not Available	514	Open in IMG/M
3300019767\|Ga0190267_10540481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	702	Open in IMG/M
3300021559\|Ga0210409_11342096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	591	Open in IMG/M
3300022214\|Ga0224505_10045660	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300022309\|Ga0224510_10567419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	670	Open in IMG/M
3300025514\|Ga0208490_100787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	15630	Open in IMG/M
3300027823\|Ga0209490_10421200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	763	Open in IMG/M
3300027831\|Ga0209797_10014085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	3708	Open in IMG/M
3300027843\|Ga0209798_10013418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4460	Open in IMG/M
3300027850\|Ga0209591_10153485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1922	Open in IMG/M
3300028590\|Ga0247823_11462558	Not Available	512	Open in IMG/M
3300028592\|Ga0247822_11547256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	561	Open in IMG/M
3300028596\|Ga0247821_11041329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	550	Open in IMG/M
3300028802\|Ga0307503_10406268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	713	Open in IMG/M
3300028809\|Ga0247824_10999227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	529	Open in IMG/M
3300028812\|Ga0247825_10532695	Not Available	838	Open in IMG/M
3300030006\|Ga0299907_11240510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	533	Open in IMG/M
3300030336\|Ga0247826_11658951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300030336\|Ga0247826_11768546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300030619\|Ga0268386_10464188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	875	Open in IMG/M
3300031228\|Ga0299914_11152338	Not Available	624	Open in IMG/M
3300031229\|Ga0299913_11054683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	777	Open in IMG/M
3300031229\|Ga0299913_11657414	Not Available	590	Open in IMG/M
3300031455\|Ga0307505_10182173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300031548\|Ga0307408_100232506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1511	Open in IMG/M
3300031731\|Ga0307405_11769888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	549	Open in IMG/M
3300031903\|Ga0307407_10825533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300031911\|Ga0307412_11375119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	638	Open in IMG/M
3300031965\|Ga0326597_10278266	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300031965\|Ga0326597_10400184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1527	Open in IMG/M
3300032002\|Ga0307416_100827837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → environmental samples → uncultured Acidimicrobiales bacterium	1023	Open in IMG/M
3300032002\|Ga0307416_103551188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	522	Open in IMG/M
3300033407\|Ga0214472_10107837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2761	Open in IMG/M
3300033407\|Ga0214472_10316023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1483	Open in IMG/M
3300033407\|Ga0214472_11831004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	510	Open in IMG/M
3300033417\|Ga0214471_10110255	All Organisms → cellular organisms → Bacteria	2266	Open in IMG/M
3300033551\|Ga0247830_10856297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	724	Open in IMG/M
3300034169\|Ga0370480_0144530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	814	Open in IMG/M
3300034384\|Ga0372946_0585985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.60%
Host-Associated	Host-Associated	9.60%
Engineered	Engineered	0.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.00%
Aquatic	Environmental → Aquatic	17.60%
Plants	Host-Associated → Plants	9.60%
Solid Waste	Engineered → Solid Waste	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.20%
Freshwater	Environmental → Aquatic → Freshwater	13.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.20%
Sediment	Environmental → Aquatic → Sediment	2.40%
Marine	Environmental → Aquatic → Marine	1.60%
Roots	Host-Associated → Plants → Roots	1.60%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.80%
Grass	Engineered → Solid Waste → Grass	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.40%
Ice	Environmental → Aquatic → Freshwater → Ice	12.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.60%
Sediment	Environmental → Aquatic → Marine → Sediment	1.60%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.80%
Composting	Engineered → Solid Waste → Grass → Composting	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.20%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	8.80%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.60%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	5.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.80%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	3.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.60%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.60%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.80%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	38.40%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	8.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	5.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.80%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.20%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	2.40%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	2.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.40%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.60%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.60%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Ore Pile And Mine Drainage Contaminated Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.60%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.60%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.80%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.80%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.80%
Serpentinite Rock And Fluid	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Serpentinite Rock And Fluid	0.80%
Rice-Straw Enriched Compost	Engineered → Solid Waste → Grass → Composting → Bioreactor → Rice-Straw Enriched Compost	0.80%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003312	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P1 sample	Environmental	Open in IMG/M
3300003313	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P3 sample	Environmental	Open in IMG/M
3300003315	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P2 sample	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005286	Mesophilic microbial community from rice straw/compost enrichment Sample: eDNA_1	Engineered	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006801	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2011	Environmental	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009084	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (megahit assembly)	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300011200	Arctic soil microbial communities form glacier forefield, Midre Lovenbreen, Svalbard, Norway (Sample 6 - S13.3.30.a - transect 3, age 5 years, surface depth)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012531	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ864 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300015064	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7B, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015163	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb1b, glacier snout)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017540	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C BE-Lig OP (version 2)	Environmental	Open in IMG/M
3300017646	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 5th pass 30_C BE-Lig OP (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300025514	Serpentinite rock and fluid subsurface biosphere microbial communities from McLaughlin Reserve, California, USA - CR11Aug_CSWold (SPAdes)	Environmental	Open in IMG/M
3300027823	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-06 (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027850	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01 (SPAdes)	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01943920	2088090015	Soil	MPVASRRAPVTVRSDGTAVVLELSDALDPVVGRVLVDAVISAVATGPERVDIDLRQLSSWTREGVKALVRCRDICHGLPGGLHYRTGRGPGRDALLAAYS
ICChiseqgaiiDRAFT_05484262	3300000033	Soil	MTPVAARRAPVTVRTDGGAVVLELSXCLDPLVGRVLVDAVTSAVATAPERVDIDLRSLSAWTDEGARSLVRCRELCRELPGGLHYRTGRGPGREALLAAYS*
JGI11643J11755_111833192	3300000787	Soil	MTPVAARRAPVTVRTDGGAVVLELSDCLDPLVGRVLVDAVTSAVATAPERVDIXLRSLSAWTDEGARSLVRCRELCRELPGGLHYRTGRGPGREALLAAYS*
JGI11643J12802_106091882	3300000890	Soil	MPVASRRAPVTVRSDGTAVVLELSDALDPVVGRVLVDAVISAVATGPERVDIDLRQLSSWTREGVKALVRCRDICHGLPGGLHYRTGRGPGRDALLAAYS*
P12013IDBA_10003186	3300003312	Ore Pile And Mine Drainage Contaminated Soil	MTPLAEPVTVRIEDAAVVFEISDALDAATGSALVAAAESAVGTVPERVHIDLQHLRSWTPEGASSLVRCREICRDLPGGLHYRTGRGPGREALLAAYS*
P32013IDBA_10009859	3300003313	Ore Pile And Mine Drainage Contaminated Soil	MSSLASRSAPVTVRTEGGAVVLELVDALDAPTGQVLVDAVASAVATSPERVEIDLTGLSTWTDAGATSLVSCREMCRDLPEGLHYRTGRGPGRDALLAAYR*
P22013IDBA_100034472	3300003315	Ore Pile And Mine Drainage Contaminated Soil	VTVRSDGAAVVLELAAALDDMVGRVLVDAVESAVATGPERIDIDLTGLVDWTQEGAEALVQCRELCRSLPEGLHYRTGRGPGREALLAAYA*
Ga0062590_1018049321	3300004157	Soil	MTPVAARRHPVTVRSESGTGGPLVVLQLASLLDAEAGEALVAAAEAALAADPQRVDIDLTSLQSWTQDGAAALVRCRAICSDLPDGLHYRTGRGPGRSALLAAYQ*
Ga0062592_1024489081	3300004480	Soil	MTPVAARRHPVTVRAEPGTVILQVSNLLDADAGAALVAAAAAALTTDPQRVDIDLTGLQSWTQDGAAALVHCRAVCGDLPDGLHYRTGRGPGRAALLAAYQ*
Ga0062591_1007899542	3300004643	Soil	MTPVAARRHPVTVRTEPGAVVLEVASLLDADTGAALVAAAEAALLTGPQRVDIDLTALQSWTQDGAAALVQCRAVCGDLPDGLHYRTGRGPGRAALLSAYQ*
Ga0062591_1018273481	3300004643	Soil	LVVLAVASLLDGEAGDALVVAAEAALATDVQRVDIDLTTLQSWTQEGASALVRCRAVCSELPDGLHYRTGRGPGRAALLAAYQ*
Ga0065721_102514851	3300005286	Rice-Straw Enriched Compost	MASVAPQRAPLSVRTEGPAIVLTLCEQLDDLTGPVLVDAVASAVATAPQRVEIDLTELLGWTDAGAQSLVRCRELCRDLPDGLHYRTGRGPGRDALLAAYR*
Ga0075363_1010128482	3300006048	Populus Endosphere	MGTGPPDAPGSLLPMTPVAARRAPVTVRSDGSAVVLELSDLLDGSAGDALVAAATAALDTTPERVDIDLRLLQSWTQEGAASLVRCREICSDLPDGLHYR
Ga0075364_110700411	3300006051	Populus Endosphere	MTPVAARRAPVTVRSDGSAVVLELSDLLDESTGEALVAAATAALDTTPERVDIDLRLLQSWTQEGAAALVRCREICGDLPDGLHY
Ga0079223_108009772	3300006801	Agricultural Soil	MSSLASPRAPVIVRNEGDAVVLELVDHLDEETGRVLVDAVAAAVASDPQRVDIDLTGIARWTDEGAASLVRCREMCRQLPEGLHYRT
Ga0079217_105308362	3300006876	Agricultural Soil	MSPVAVPRSPVTVRADGRTVILEVSELLDAGTGAALLAAAEAAVTTDPERVDIDLTSLLSWTQDGAAALVQCRAVCADLPDGLHYRTGRGPGRSALLAAYT*
Ga0079218_123098951	3300007004	Agricultural Soil	MTPVAARRAPVTVRTDGAAVVLELSSALDPLVGRVLVDAVESAVAMSPDRVDIDLRSITEWTEEGARSLVRCRELCRDLPDGLHYRTGRGPGRDALLAAYA*
Ga0079218_131430691	3300007004	Agricultural Soil	MSPVAVPRSPVTVRADGRTVILEVSELLDAGTGAALLAAAEAAVTTDPERVDIDLTSLLSWTQDGAAALVQCRAVCADLP
Ga0105044_1000833610	3300007521	Freshwater	MTPVAARRAPVTVRSTDAAVVLELSDLLDATSGEALVAAANAALETSPARVDIDLRGLRSWTQDGAVSLVRCREICSGLPQGLHYRTGRGPGRAALLAAYA*
Ga0105046_104080042	3300009084	Freshwater	MTPVAARRAPVTVRSTDAAVVLELSDLLDATSGEALVAAANAALETSPARVDIDLRGLRSWTQDGAVALVRCREICSDLPQGLHYRTGRGPGRAALLAAYA*
Ga0079224_1000212133	3300009095	Agricultural Soil	MSSLASPRAPVIVRNEGDAVVLELVDHLDEETGRVLVDAVAAAVASDPQRVDIDLTGIARWTDEGAASLVRCREMCRQLPEGLHYRTGRGPGRDALLAAYR*
Ga0079224_1022750662	3300009095	Agricultural Soil	VTSLASRSAPLTVRTESGAVVLEVGDTLDERTGGVLVDAVASAVATTPERVDIDLTALTGWTAAGASSLVQCREMCRGLPDGLHYRTGRGAGREALLAAYR*
Ga0117941_11810631	3300009120	Lake Sediment	LQRERHTIAEPVRQAAYMTPVAARRAPVTVRTEGATVVLELSQSLDQQVGRVLVDAVASALATNPERIHIDLRELSSWTDEGARALVACRELCGDLPDGLHYCTGRGPGRDALLAAYC*
Ga0137471_1001142	3300011200	Glacier Forefield Soil	MTPVAARRAPVTVRTDDGAVVLVLSDALDHTVARVLIDAVTSAISTSPQRVDIDLRALVSWTDEGARALVACRELCRDLPDGLHYRTGRGPGREALLAAYA*
Ga0136623_101846132	3300012045	Polar Desert Sand	MSAIAARRTPVTVRTVGGAVVLELSTLLDAYAGEALVAAAEAALTTEPHRVDIDLRALKSWTQDGVRSLVRCRAVCGDLPDGLHYRTGRGPGRAALLAAYS*
Ga0136618_1000104910	3300012188	Polar Desert Sand	MTVVAARPASLTVRTDGGAVILELSDLLDAATGDALVAAAEAALATDPERVDIDLRALQSWTQDGVSSLLRCRAICGDLPDGLHYRTGRGPGRAALLAAYS*
Ga0136633_10085377	3300012527	Polar Desert Sand	MMPVAAQRAPVTVRTAGAAVILELSDLLDASTGEALVSAAQAALTTDPERVDIDLRALQSWTQEGVASLVACRAVCGDLPDGLHYRTGRGPGRAALLAAYA*
Ga0136635_100068683	3300012530	Polar Desert Sand	MPVDARPAAVTVRTDGVAVVLELSDLLVGRTGEALVAAAETALATDPERVDIDLRALQSWTQDGVVALVRCRAICGDLSDGLHYRTGRGPGRAALLAAYT*
Ga0136640_101673561	3300012531	Polar Desert Sand	MSAIAARRTPVTVRTDGGAVVLELSDLLDADAGDALVAAAEAALTTEPQRVDIDLRALQSWTQDGVRSLVRCRAVCGDLPDGLHYRTGRGPGRAALLAAYS*
Ga0136614_111026242	3300012684	Polar Desert Sand	VLELAVCLDASTGQTLVAAAEAALTTEPERVDIDLRGLRSWTPEGVVALVRCRAICGDLPDGLHYRTGRGPGREALLAAYS*
Ga0157288_101787501	3300012901	Soil	MTPVAARRHPVTVRTEPGAVVLEVASLLDADTGAALVAAAEAELLTRPQRIDIDLTALQSWTQDGAAALVQCRAVCGDLPDGLHYRTGRGPGRAALLSAYQ*
Ga0167641_1179161	3300015064	Glacier Forefield Soil	TPVAARRAPVTVRTEGAAVVLELADLLDAGTAEALVAAAEAALRTDPERVDIDLRALRSWTQDGVVALVRCREICSDLPDGLHYRTGRGPGRSALLAAYT*
Ga0167665_10253152	3300015163	Glacier Forefield Soil	MTPVAARPAPVTVHTNGAAVVLELSDALDPTAGRALVDAVTSAVAHHAERVDIDLRLLVSWTLEGARALVRCRELCRDLPDGLHYRTGRGPGREALLAAYA*
Ga0132258_101423512	3300015371	Arabidopsis Rhizosphere	VVLQLASLLDAEAGEALVAAAEAALAADPQRVDIDLTSLQSWTQEGAAALVRCRAICSDLPDGLHYRTGRGPGRSALLAAYQ*
Ga0132258_111240193	3300015371	Arabidopsis Rhizosphere	MTPVAARRHPVTVRTEPGAVVLEVASLLDADTGAALVAAAEAALLTAPQRVDIDLTALQSWTQDGAAALVQCRAVCGDLPDGLHYRTGRGPGRAALLSAYQ*
Ga0132257_1015528222	3300015373	Arabidopsis Rhizosphere	MTPVAARRHPVTVRSESGTEGPLVVLQLASLLDAEAGEALVAAAEAALAADPQRVDIDLTSLQSWTQDGAAALVRCRAICSDLPDGLHYRTGRGPGRSALPAAYQ*
Ga0132255_1023159252	3300015374	Arabidopsis Rhizosphere	MTPVAARRHPVTVRTEPGAVVLEGASLLDADTGAALVAAAEAALLTGPQRVDIDLTALQSWTQDGAAALVQCRAVCGDLPDGLHYRTGRGPGRAALLSAYQ*
Ga0180217_100025242	3300017540	Compost	MASVAPQRAPLSVRTEGPAIVLTLCEQLDDLTGPVLVDAVASAVATAPQRVEIDLTELLGWTDAGAQSLVRCRELCRDLPDGLHYRTGRGPGRDALLAAYR
Ga0180217_10036296	3300017540	Compost	MSSLASPRAPVTVRTEGDAVVLALADDLDAATGRALVSAVATAVAAGPQRVDIDLTAITRWTDEGATSLVRCRALCRELPEGLHYRTGRGPGRDALLAAYR
Ga0182737_11325581	3300017646	Compost	MTPVAARRAPLTVRTEGAAVVLELSDSLDPTTGRVLVDAVASAVATAPERVDIDLRAISTWTHDGAHALVECRELCRDLPEGLHYRTGRGPGRAALLAAYS
Ga0183260_100726712	3300017787	Polar Desert Sand	MTVVAARPASLTVRTDGGAVILEVSDLLDASTGDALVAAAEAALATDPERVDIDLRALRSWTQDGVSSLVRCRAICGDLPDGLHYRTGRGPGRAALLAAYS
Ga0183260_102031491	3300017787	Polar Desert Sand	MLPVAAQRAPLTVRTDGAAVILELSDLLDASTGEALVSAAQAALATDPERVDIDLRALQSWTQEGVASLVACRAVCADLPDGLHYRTGRGPGRAALLAAYA
Ga0183260_106643162	3300017787	Polar Desert Sand	GPALWPPMTSVAARGLPVTVRSQGGAVILELAVCLDAGTGQALVAAAEAALTTDPERVDIDLRGLRSWTPEGVVALVRCRSICGDLPDGLHYRTGRGPGREALLAAYS
Ga0136617_108569291	3300017789	Polar Desert Sand	ASRRAPVTVRTDGGAVVLELSDLLDAPTGDALVAAAVAALGAEPERVDIDLRGLQSWTQEGAMALVRCRAVCGDLPDGLHYRTGRGPGRAALLAAYAE
Ga0136617_109945051	3300017789	Polar Desert Sand	RTDGGAVILELSDLLDASTGDALVAAAEAALATDPERVDIDLRALQSWTQDGVSSLLRCRAICGDLPDGLHYRTGRGPGRAALLAAYS
Ga0184634_102025751	3300018031	Groundwater Sediment	MTPVAARREPVTVRSEPGAVVLEVADLLDAGAGEVLVAAAEAAVSMRPERVDIDLTGLQSWTQEGAAALVRCREVCGDLPDGLHYRTGRGPGRAALLAAYT
Ga0184633_104769972	3300018077	Groundwater Sediment	MTPVAARREPVTVRSEPGAVVLEVADLLDAGAGEVLVAAAEAAVSMRPERVDIDLTGLQSWTQDGAAALVRCREVCGDLPDGLHYRTGRGPGRAALLAAYA
Ga0190265_100057737	3300018422	Soil	MTPVAARRAPVTVRTEGAAVVLELSDNLDATVGRALVDAATAAVAAAPERLDIDLRNLRSWTPDGATALVRCREICTDLADGLHYRTGRGPGRDALLAAYT
Ga0190265_106355752	3300018422	Soil	MTPVAARRAPVTVRTEPGAVVLELAELLDAPVGAALLAAAEAALATEPERVDIDLTALQSWTQEGAAALVRCREVCSDLPDGLHYRTGRGPGRAALLAAYS
Ga0190265_107542922	3300018422	Soil	VTVRTDGAAVVLELSDLLDAGTGDALVAAAEAALTTDPERVDIDLRGLQSWTQDGVSALVRCRSICGDLPDGLHYRTGRGPGRAALLAAYA
Ga0190265_116182331	3300018422	Soil	MTPLAARRAPLTVHTEPGAVVLELADLLDASTGAALIAAAEAALATEPERVDVDLTALQSWTQEGAAALVRCREVCTDLPGGLHYRTGRGPGRAALLAAYT
Ga0190265_135257191	3300018422	Soil	AARRAPVTVRTDGAAVVLELSGLLDAGTGAALVAAAEAALTTDPERVDIDLRALQSWTQEGVSALVRCRSICGDLPDGLHYRTGRGPGRAALLAAYA
Ga0190272_100794513	3300018429	Soil	MTPVASRRAPVTVRTEGAAVVLELSDNLDATVGRALVDAATAAVADTPERLDIDLRRLRTWTQDGAIALVRCREICGDLADGLHYRTGRGPGRDALLAAYS
Ga0190272_102816292	3300018429	Soil	MTPVAARRAPVTVRTDGAAVVLELSDSLDSLVGRVLVDAVTSAVATHPDRVDIDLRSITDWTDDGARALVQCRELCRDLPDGLHYRTGRGPGRDALLAAYA
Ga0190272_112740872	3300018429	Soil	MTPVAARRAPVTVRTEGAAVVLELSDNLDATVGRALVDAATAAVAAAPERLDIDLRNLQSWTPDGASALVRCREICTDLADGLHYRTGRGPGRDALLAAYT
Ga0190272_117800971	3300018429	Soil	MTPVASRRAPVTVRTEGAAVVLELSDILDAAVGRTLVDAATAAVADGPERLDIDLRKLRTWTPDGAIALVRCREICSDLADGLHYRTGKGPGREALLSAYS
Ga0190272_117932412	3300018429	Soil	VVLELSDLLDAGIGAALVAAAEAALLTEPERVDIDLRVLQSWTQDGVTALVRCREICSDLPDGLHYRTGRGPGRAALLAAYT
Ga0190275_106645772	3300018432	Soil	MTFVAARREPVTVRTELGTVVLEVSDLLDGLAGDALVAAAEAAVTTDPERVDINLTALQSWTQEGAAALVRCRALCSDLPDGLHYRTGRGPGRAALLAAYS
Ga0190275_106749692	3300018432	Soil	MTSLAARRAPVTVRTELATVILEVCDLLDAGAGDALVAAAEAACATEPERVDIDLTALQSWTQEGAASLVRCRAVCGDLPDGLHYRTGRGPGRAALLAAYT
Ga0190275_135625761	3300018432	Soil	EGAAVVLELSDTLDATVGRALVDAATAAVADTPERLDIDLRRLRTWTHDGAVALVRCREICGDLADGLHYRTGRGPGRDALLAAYS
Ga0190269_100021668	3300018465	Soil	MSSLASRSAPVTVRTEGGAVVLELVDALDEPTGRVLVDAVASAVATSPERVEIDLTGLSTWTDGGATSLVSCREMCRDLPEGLHYRTGRGPGRDALLAAYR
Ga0190269_100148723	3300018465	Soil	MTPVAARRAPVTVRTEGAVVVLELSDVLDPLVGRVLVDAVTSALSMRPERIEIDLRLLESWTDDGVCALVTCRELCRELPDGLHYRTGRGPGRAALLAAYTCD
Ga0190269_100206683	3300018465	Soil	MTPVAARRAPVTVHHDGGAVVLELSHHLDQLVGRVLVDAVAAALDPRPERIEIDLQALETWTPDGARALVECRALCRDLPDGLHYRTGRGPGRDALLAAYT
Ga0190269_100439113	3300018465	Soil	VTVRTDGAAVVLELSDSLDLRTGRVLVDAVASAVATTPARVDIDLTGLVDWCDEGVASLVQCRELCRDLPEGLHYRTGRGPGRDALLAAYR
Ga0190269_100462971	3300018465	Soil	MTPVAARRAPVTVRTEGAAVVLELSDNLDDKVGRALVDAAAAAVADGPERLDIDLRNLRTWTPDGASALVRCRELCGDLADGLHYRTGRGPGRDALLSAYS
Ga0190269_102340682	3300018465	Soil	MSQLASRPAPVTVRSEGAAVVLELADRLDDRVGRVLIDAVTSAITTTPVRVDIDLRALESWTPEGARTLVACRQLCRDLPDGLHYRTGRGPGREALLAAYS
Ga0190269_104334532	3300018465	Soil	VTVHTDGAVVVLELSHHLDQLVGRVLVDAVTAALGHKPERIEIDLQALESWTPDGARALVDCRALCRDLPDGLHYRTGRGPGRDALLAAYT
Ga0190269_106024412	3300018465	Soil	MTPVAARRAPVTVRTDGAAVVLELSSALDPLVGRVLVDAVESAVAMSPDRVDIDLRSITEWTEEGARSLVRCRELCRDLPDGLHYRTGRGPGREALLAAYA
Ga0190268_112756721	3300018466	Soil	MTPVASRRAPVTVHTDGGAVVLELSDSLDLLVGRALLDAVTSAVATGPERVDIDLRSITGWTEDGAKALVQCRELCCDLPDGLHYRTGR
Ga0190268_112775022	3300018466	Soil	PVAARRSPVTVHADGAVVVLEVSDLLDDGAGAALVAAAEAALTTDPRRMDIDLTALCSWTQDGAASLVRCRSICADLPDGLHYRTGRGPGRDALLAAYA
Ga0190268_115142571	3300018466	Soil	RRAPVTVRTTGAAVILELADHLDAAAGEALVTAAEAAVTTEPDRVDIDLRGLQSWTRDGVAALVRCRAVCGDLPDGLHYRTGRGPGRAALLAAYT
Ga0190270_100165716	3300018469	Soil	MTPVAARHEPVTVRTEPGAVVLELSDLLDAGAGAALVAAAESAISTLPERVDIDLTGLQSWTQDGAAALVRCREVCGDLPDGLHYRTGRGPGRAALLAAYT
Ga0190270_116833452	3300018469	Soil	MPPVAARREPVTVRSEPGAVVLEVADLLDHGAGEALVAAAEAAVSTLPERVDIDLTGLQSWTQEGATALVRCREVCGDLPDGLHYRTGRGPGRAALLAAYA
Ga0190270_126331222	3300018469	Soil	MTPVAARRSPVTVRSVGAAVVLELADLLDASTGVALVAAAEAALTTDPERVDIDLRSLQSWTQEGAVALVRCREICGDLPDGLHYRTGRGPGRAALLAAYT
Ga0190270_132245741	3300018469	Soil	MTPVAARRLPVTVRREPGAVILELADLLDADTGAALVAAAEAALASDPERVDIDLTALQSWTQEGAAALVRCRAVCGDLPDGLHYRTGRGPGRAALLAAYT
Ga0190274_109412952	3300018476	Soil	VTACRNGSAVVLELADLLDATTGAALVAAATAALDTQPSRVDIDLRALQSWTQQGVVALVRCREICGDLPEGLHYRTGRGPGRAALLAAYA
Ga0190274_128938851	3300018476	Soil	LDATSGEALVSAAQAALQTNPQRVDIDLRSLQSWTQDGVVALVRCREICADLPEGLHYRTGRGPGRAALLAAYA
Ga0190271_102428592	3300018481	Soil	MTPVDARRAPVTVRIDGAAVVLELADLLDADTGAALVAAADAATATGPTRVDIDLRRLKSWTQDGAAALVCCREICGELPDGLHYRTGRGPGRAALLAAYT
Ga0190271_107633612	3300018481	Soil	VTVRSDGAAVVLELADLLDESIGEALVAAATAALETTPERVDIDLRLLQSWTQEGAAALVRCREICGDLPDGLHYRTGRGPGRAALLAAYS
Ga0190271_111801792	3300018481	Soil	MTPVAARRHPVTVRRESGTDGPSVTLELSELLDADIGAALVAAAEAALATEPHRLDIDLTALQSWTQDGAAALVRCRDLCSDLPDGLHYRTGRGPGRAALLAAYT
Ga0190271_113572921	3300018481	Soil	MSPVAARREPVTVRSEPGAVVLEVADLLDHGAGEALVAAAEAAVSTLPERVDIDLTGLQSWTQEGAAALVRCREVCGDLPDGLHYRTGRGPGRAALLAAYT
Ga0190271_118447592	3300018481	Soil	AGQGPSVVLELATLLDADAGAALVAAAEAALTTDPQRVDIDLSALQSWTQDGAAALVRCRAVCGDLPEGLHYRTGRGPGRAALLAAYQ
Ga0190271_132630301	3300018481	Soil	VTARSDGAAVVLELSDLLDGTTAEALVAAAHAALETNPARVDIDLRALQSWTQDGVQSLVRCREICGDLPDGLHYRTGRGPGRAALLAAYA
Ga0190264_101553871	3300019377	Soil	MTPVAARRAPVTVRTDGAAVVLELSDSLDSLVGRVLVDAVTSAVATHPDRVDIDLRSIIEWTQEGARALVQCRELCRDLPDGLHYRTGRGPGREALLAAYA
Ga0190264_102902572	3300019377	Soil	MPVASRRAPVIVRTDGVAVVLELSDSLDPMVGRALVDAVAAAVATGPERVDIDLRSIVSWTIEGAGALVQCRELCRDLPDGLHYRTGRGPGREALLAAYA
Ga0190264_114649251	3300019377	Soil	VTVRTTSAAVVLELSDLLDAGAGDALVAAAEAALLTEPERVDIDLRALQSWTQDGVVALVRCRAICGDLPDGLHYRTGRGPGRAALLAAYT
Ga0190264_121932712	3300019377	Soil	MTPVAARRSQVTVRSEGDAVILELSDNLDATVGRALVDAATAAVADGPERLDIDLRKLRSWTPEGAIALVRCREICAD
Ga0190267_105404811	3300019767	Soil	MSPVAARRAPVTVRTDGAAVVLELSDALDPLVGRVLVDAVTSAVATNPDRVDIDLRSITGWTPEGARALVQCRELCRDLPDGLHYRTGRGPGREALLAAYA
Ga0210409_113420961	3300021559	Soil	MTPVAARRAPVTVRSEGAAVVLELSDTLDATVGRALVDAATAAVADAPERLDIDLRKLRTWTPDGAIALVRCREICSDLADGLHYRTGRGPGRDALLSAYS
Ga0224505_100456603	3300022214	Sediment	MTPATARRSPLTVRSDRGALVLELADLLDASVGEALVAAADAALETSPSRVDIDLQRLQSWTHEGALALVRCREICRDLPEGLHYRTGRGPGRAALLAAYA
Ga0224510_105674191	3300022309	Sediment	MTPATARRSPLTVRSDRGALVLELADLLDASVGEALVAAADAALETSPSRVDIDLQRLQSWTHEGALALVRCREICRDLPEGLHYRTGRGPGRSALLAAYA
Ga0208490_1007875	3300025514	Serpentinite Rock And Fluid	VTSLASRSAPLTVRTESGAVVLELGDTLDERTGGVLVDAVASAVATTPERVDIDLTALTGWTAQGATSLVQCREMCRGLPDGLHYRTGRGAGREALLAAYR
Ga0209490_104212001	3300027823	Freshwater	MTPVAARRAPVTVRSTDAAVVLELSDLLDATSGEALVAAANAALETSPARVDIDLRGLRSWTQDGAVALVRCREICSDLPQGLHYRTG
Ga0209797_100140855	3300027831	Wetland Sediment	MVMSSVPPVAAGRVPVIVRTEGTAVVLELSDLLDASAGNALVAAAEAARSTGPDRIHIDLRGLQTWTQEGVAALVRCRTICSDLPEGLHYRTGRGPGRAALLAAYT
Ga0209798_100134181	3300027843	Wetland Sediment	PVAAGRVPVIVRTEGTAVVLELSDLLDASAGNALVAAAEAARSTGPDRIHIDLRGLQTWTQEGVAALVRCRTICSDLPEGLHYRTGRGPGRAALLAAYT
Ga0209591_101534852	3300027850	Freshwater	VTVRSTDAAVVLELSDLLDATSGEALVAAANAALETSPARVDIDLRGLRSWTQDGAVSLVRCREICSGLPQGLHYRTGRGPGRAALLAAYA
Ga0247823_114625582	3300028590	Soil	VTVRSDGAALVLELSDHLDADTGAALVAAAEAALVTAPERVDIDLRGLQSWTREGVAALVRCRAVCADLPDGLHYRT
Ga0247822_115472561	3300028592	Soil	VTVRAEPGTVILQVSNLLDADAGAALVAAAEAALTTDPQRVDIDLTGLQSWTQDGAAALVRCREVCGDLPDGLHYRTGRGPGRAALLAAYA
Ga0247821_110413292	3300028596	Soil	APERRSRPPPCRPMTPVAARRHPLTVRTEPGTVVLELASLLDAGAGAALVAAAEAALAMEPQRVDIDLTALQSWTQDGAAALVQCRVVCGDLPDGLHYRTGRGPGRAALLAAYQ
Ga0307503_104062681	3300028802	Soil	MTPVAARLTPVTVRTEPGAIVLELADLLDAGAGAALVAAAEAALLTLPERVDIDLTALQSWTQEGAAALVRCREVCGDLPDGLHYRTGRGPGRAALLAAYS
Ga0247824_109992271	3300028809	Soil	RTASDRRSRPPPFPPMTPVAARRAPVTIRTEPGAVVLELADLLDARAGAALVAAAEAALGTQPERVDIDLTALQSWTQDGAAALVRCREVCGDLPDGLHYRTGRGPGRAALLAAYA
Ga0247825_105326951	3300028812	Soil	VTVRSDGAALVLELSDHLDADTGAALVAAAEAALVTAPERVDIDLRGLQSWTREGVAALVRCRAVCADLPDGLHYRTGRGPGRAALLAAYT
Ga0299907_112405102	3300030006	Soil	PPAASRHAPVIVRTDGAAVILELSDCLDPIAGRALVDAVEAAVATGPDRVDIDLRSIAAWTDEGAAALVQCRELCRELPDGLHYRTGRGPGREALLAAYA
Ga0247826_116589511	3300030336	Soil	LVVLQLASLLDAEAGEALVADAEAALAADPQRVDIDLTSLQSWTQEGAAALVRCRAICSDLPDGLHYRTGRGPGRSALLAAYQ
Ga0247826_117685462	3300030336	Soil	LQMAELLDADAGDALVAAAEAALLTEPQRVDIDLTALQSWTQDGAAALVRCRAVCGDLPDGLHYRTGRGPGRAALLAAYQ
Ga0268386_104641881	3300030619	Soil	VTVRTDGAAVVLELSDLLDAGTGDALVAAAEAALLTDPERVEIDLRALQSWTHGGVVSLVRCRAICSDLPNGLHYRTGRGPGRAALLAAYT
Ga0299914_111523382	3300031228	Soil	SRSAPFLPMTPVAARRAPVTVRTEGAAVVLELSDLLDADTGDALVAAAEAALSTEPDRVDIDLRGLRSWTQDGARSLVRCRTVCTDLPDGLHYRTGRGPGRAALLAAYA
Ga0299913_110546832	3300031229	Soil	VTVRTEGAAVVLELSDLLDADTGDALVAAAEAALSTEPERVDIDLRALRSWTQDGARSLVRCRTVCTDLPDGLHYRTGRGPGRAALLAAYA
Ga0299913_116574142	3300031229	Soil	MPPVTARTPLTVHTDAGTVVLEVSDLLDGGAGAALVAAAEAALTTAPQRIDIDLTALRSWTQDGAAALVQCRSVCADLPDGLHYRTGRGPGR
Ga0307505_101821732	3300031455	Soil	MTPVASRRAPVTVRTEGAAVVLELSDTLDANVGRALVDAATAAVADTPERLDIDLRKLRTWTPDGAIALVRCREICGDLADGLHYRTGRGPGRDALLAAYS
Ga0307408_1002325063	3300031548	Rhizosphere	MTPVAARRSQVTVRSEGDAVILELSDTLDATVGRALVDAATAAVADAPERLDIDLRQLRSWTPEGAIALVRCREICTDLADGLHYRTGKGPGRDALLSAYS
Ga0307405_117698881	3300031731	Rhizosphere	VTVRTEGAAVVLELSDLLDAGTGDALVAAAEAALSTRPDRVDIDLRALQSWTQEGVASLVRCRSICCDLPDGLHYRTGRGPGRSALLAAYT
Ga0307407_108255331	3300031903	Rhizosphere	VVLELSDLLDAGTGDALVAAAEAALSTQPDRVDIDLRALQSWTQEGVASLVRCRSICCDLPDGLHYRTGRGPGRSALLAAYT
Ga0307412_113751192	3300031911	Rhizosphere	MTPVAARRSQVTVRSEGDAVILELSDTLDATVGRALVDAATAAVADAPERLDIDLRQLRSWTPEGAIALVRCREICTDLADGLHYRTGKGPGR
Ga0326597_102782661	3300031965	Soil	MPVAARRAPVTVHTDAGAVVLELSDSLDSLVGRVLIDAVSSAVASQAQRVDIDLRSLASWSHEGARALVECREICRDLPDGLHYRTGRGPGRDALLAAYA
Ga0326597_104001842	3300031965	Soil	MTPVAARRAPVTVRTEGAAVVLELSDALDPMVGRVLIDAVASAVATAPERVDIDLRSLMSWTDEGARALVRCRELCRDLPDGLHYRTGRGAGREALLAAYA
Ga0307416_1008278371	3300032002	Rhizosphere	MPVASRRRPVIVHTDGVAVVLELSDSLDPAVGRALVDAVTAAVATGPERVDIDLRSIVSWTIEGAGALVQCRELCRDLPDGLHYRTGRGPGREALLAAYA
Ga0307416_1035511881	3300032002	Rhizosphere	MTPVAARRAPVTVRTDGAAVVLELSDALDRLVGRVLLDAVASAVATSPERVDIDLSSLASWTPEGAQTLVECRAICRELPDGLHYRTGRGPGRDALLAAYA
Ga0214472_101078372	3300033407	Soil	MTSVAARDALVTVRDLGTAVVLEVADCLDALTGRVLVDAVTSAIETEPQRVDIDLRTLASWTHDGARSLVRCRELCRDLPDGLHYRTGRGPGREALLAAYA
Ga0214472_103160232	3300033407	Soil	MTPVAARRAPVTVRTKGAAAVLELSDALDSSVGQILIEKLREAVSSGPERVDIDLRGLVSWTPEGAGALVTCREICREVPDGLHFRTGRGAGREALLAAYS
Ga0214472_118310041	3300033407	Soil	MPPVASRQAPVIVRTDGAAVILELSDCLDPTVGRALVDAVMAAVATGPNRVDIDLRSIVGWTLEGAGALVRCRELCRELPDGLHYRTGRGPGREALLAAYT
Ga0214471_101102552	3300033417	Soil	VTVRTEGAAVVLELSDLLDAGTGDALVAAAEAAVSTQPERVDIDLRALQSWTQEGVASLVQCRSICTDLPDGLHYRTGRGPGRSALLAAYT
Ga0247830_108562971	3300033551	Soil	MTPVAARRHPLTVRTEPGTVVLELASLLDAGAGAALVAAAEAALAMEPQRVDIDLTALQSWTQDGAAALVQCRVVCGDLPDGLHYRTGRGPGRAALLAAYQ
Ga0370480_0144530_336_641	3300034169	Untreated Peat Soil	MTPVTARPSPVTVRSDKGAVVLELSDLLDANVGEALVAAARAALDAAPARVDIDLRALQSWTKDGAVALVRCREICSDLPEGLHYRTGRGPGRAALLAAYA
Ga0372946_0585985_65_370	3300034384	Soil	MTPVAARRAPVTVRTEGAAVVLELSDILDATVGRALIDAATAAVADAPERVDIDLRQLRTWTPDGAIALVRCREICADLADGLHYRTGRGPGRDALLSAYS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067546

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences