Sample 3300017540

Overview

Basic Information
IMG/M Taxon OID	3300017540 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0127392 \| Gp0191727 \| Ga0180217
Sample Name	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C BE-Lig OP (version 2)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	519181799
Sequencing Scaffolds	24
Novel Protein Genes	25
Associated Families	19

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15	1
All Organisms → cellular organisms → Bacteria	7
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4
All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1
Not Available	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → unclassified Paracoccus → Paracoccus sp. J4	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Lignin-Adapted Enriched Soil Microbial Communities From Emeryville, California, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost → Lignin-Adapted Enriched Soil Microbial Communities From Emeryville, California, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → anthropogenic environment → compost
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	USA: Emeryville, California
Coordinates	Lat. (^o)	37.83	Long. (^o)	-122.29	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

Zoom:	Powered by OpenStreetMap^©

Family	Category	Number of Sequences	3D Structure?
F007999	Metagenome	341	Y
F011188	Metagenome / Metatranscriptome	294	Y
F019412	Metagenome / Metatranscriptome	230	Y
F028447	Metagenome / Metatranscriptome	191	Y
F031471	Metagenome / Metatranscriptome	182	Y
F036409	Metagenome / Metatranscriptome	170	N
F036417	Metagenome / Metatranscriptome	170	Y
F037930	Metagenome / Metatranscriptome	167	Y
F050234	Metagenome / Metatranscriptome	145	Y
F054879	Metagenome / Metatranscriptome	139	Y
F059781	Metagenome	133	Y
F067546	Metagenome	125	Y
F072045	Metagenome / Metatranscriptome	121	Y
F075144	Metagenome / Metatranscriptome	119	Y
F085354	Metagenome	111	Y
F091556	Metagenome / Metatranscriptome	107	Y
F097375	Metagenome / Metatranscriptome	104	Y
F104508	Metagenome	100	Y
F104646	Metagenome / Metatranscriptome	100	Y

Family

Category

Number of Sequences

3D Structure?

F007999

Metagenome

341

F011188

Metagenome / Metatranscriptome

294

F019412

Metagenome / Metatranscriptome

230

F028447

Metagenome / Metatranscriptome

191

F031471

Metagenome / Metatranscriptome

182

F036409

Metagenome / Metatranscriptome

170

F036417

Metagenome / Metatranscriptome

170

F037930

Metagenome / Metatranscriptome

167

F050234

Metagenome / Metatranscriptome

145

F054879

Metagenome / Metatranscriptome

139

F059781

Metagenome

133

F067546

Metagenome

125

F072045

Metagenome / Metatranscriptome

121

F075144

Metagenome / Metatranscriptome

119

F085354

Metagenome

111

F091556

Metagenome / Metatranscriptome

107

F097375

Metagenome / Metatranscriptome

104

F104508

Metagenome

100

F104646

Metagenome / Metatranscriptome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0180217_1000024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	328318	Open in IMG/M
Ga0180217_1000051	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	254205	Open in IMG/M
Ga0180217_1000252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	100449	Open in IMG/M
Ga0180217_1003629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12882	Open in IMG/M
Ga0180217_1007323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7799	Open in IMG/M
Ga0180217_1007420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15	7733	Open in IMG/M
Ga0180217_1019691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3649	Open in IMG/M
Ga0180217_1022413	All Organisms → cellular organisms → Bacteria	3271	Open in IMG/M
Ga0180217_1029898	All Organisms → cellular organisms → Bacteria	2593	Open in IMG/M
Ga0180217_1035242	All Organisms → cellular organisms → Bacteria	2255	Open in IMG/M
Ga0180217_1041676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1953	Open in IMG/M
Ga0180217_1044079	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
Ga0180217_1056007	All Organisms → cellular organisms → Bacteria	1517	Open in IMG/M
Ga0180217_1071405	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
Ga0180217_1078522	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1137	Open in IMG/M
Ga0180217_1078728	Not Available	1134	Open in IMG/M
Ga0180217_1081519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	1101	Open in IMG/M
Ga0180217_1083512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → unclassified Paracoccus → Paracoccus sp. J4	1079	Open in IMG/M
Ga0180217_1090401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1008	Open in IMG/M
Ga0180217_1103400	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus	901	Open in IMG/M
Ga0180217_1156722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium	639	Open in IMG/M
Ga0180217_1159749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	629	Open in IMG/M
Ga0180217_1160773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	626	Open in IMG/M
Ga0180217_1164836	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0180217_1000024

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

328318

Open in IMG/M

Ga0180217_1000051

All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae

254205

Open in IMG/M

Ga0180217_1000252

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

100449

Open in IMG/M

Ga0180217_1003629

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

12882

Open in IMG/M

Ga0180217_1007323

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

7799

Open in IMG/M

Ga0180217_1007420

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aminobacter → unclassified Aminobacter → Aminobacter sp. J15

7733

Open in IMG/M

Ga0180217_1019691

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

3649

Open in IMG/M

Ga0180217_1022413

All Organisms → cellular organisms → Bacteria

3271

Open in IMG/M

Ga0180217_1029898

All Organisms → cellular organisms → Bacteria

2593

Open in IMG/M

Ga0180217_1035242

All Organisms → cellular organisms → Bacteria

2255

Open in IMG/M

Ga0180217_1041676

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi

1953

Open in IMG/M

Ga0180217_1044079

All Organisms → cellular organisms → Bacteria

1862

Open in IMG/M

Ga0180217_1056007

All Organisms → cellular organisms → Bacteria

1517

Open in IMG/M

Ga0180217_1071405

All Organisms → cellular organisms → Bacteria

1233

Open in IMG/M

Ga0180217_1078522

All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium

1137

Open in IMG/M

Ga0180217_1078728

Not Available

1134

Open in IMG/M

Ga0180217_1081519

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium

1101

Open in IMG/M

Ga0180217_1083512

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → unclassified Paracoccus → Paracoccus sp. J4

1079

Open in IMG/M

Ga0180217_1090401

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi

1008

Open in IMG/M

Ga0180217_1103400

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Cystobacter → Cystobacter fuscus

901

Open in IMG/M

Ga0180217_1156722

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → unclassified Thermomicrobiales → Thermomicrobiales bacterium

639

Open in IMG/M

Ga0180217_1159749

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi

629

Open in IMG/M

Ga0180217_1160773

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi

626

Open in IMG/M

Ga0180217_1164836

All Organisms → cellular organisms → Bacteria

613

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0180217_1000024	Ga0180217_1000024174	F104508	MDLPDMLREALELQILEQDPEAAAGVVGSGVQEHGAAQVSQVLLEATAVALRRMVEITDEAFDAADLLAKLALDGAVPEHRLELLTEVLVAAAATAGGIRPSIDAMHQRLGDQDLVFGAWLGTLTGLRVVAMATESTEAEVVEDVVAAFEVPALEGPPSDDAADG
Ga0180217_1000051	Ga0180217_100005187	F031471	MRLTGFEAIEYAEKEGLTLHKSEDEFDPARSNLTIAEAEAIATEDPDLIWLEVPEDEYYGERKNMEPNR
Ga0180217_1000252	Ga0180217_100025242	F067546	MASVAPQRAPLSVRTEGPAIVLTLCEQLDDLTGPVLVDAVASAVATAPQRVEIDLTELLGWTDAGAQSLVRCRELCRDLPDGLHYRTGRGPGRDALLAAYR
Ga0180217_1000252	Ga0180217_100025257	F050234	VVPPWWLLIPMLEFPVLMALLDCWQRPPEHFAEGAEDRRAWLRWLLVAVLTVPVLLGYGIILGYFYAVVRRNSPASPR
Ga0180217_1003629	Ga0180217_10036296	F067546	MSSLASPRAPVTVRTEGDAVVLALADDLDAATGRALVSAVATAVAAGPQRVDIDLTAITRWTDEGATSLVRCRALCRELPEGLHYRTGRGPGRDALLAAYR
Ga0180217_1007323	Ga0180217_10073236	F050234	VIPPWPLLVLLLEFPVLMALLDCWQRPAEQFAEGAADRRAWLRWLLVAVVTIPVLVGYGIVLGYYYAVVRRRSPSAPG
Ga0180217_1007420	Ga0180217_10074201	F036409	PETKKWKGPVVEAPFNDWNIDGGCPNFDAAGNIMIWSAGYDRGPDVITGGESGAGGVYDLYWLPTSEVIDYYKKAAGIG
Ga0180217_1019691	Ga0180217_10196914	F059781	VHPERRLRIVTETARAVLDGRLDPRDGASTLTMQQAQITERLRSDRIDVTQAEADQVALTLRRLAEQVTDRGGSPDAVEAQQEIARILGELAQTLR
Ga0180217_1022413	Ga0180217_10224133	F085354	MAKKLAATSPAPSQPKPEERFVELMLVAADFVQSCGGLEPAKKALADAGKFVESAGSVESATRALEVLESLKQKIGT
Ga0180217_1029898	Ga0180217_10298982	F054879	MLDLPASDTRVFLFHAEDAAADPSAAMDRVNNWLAKDRSSSAYPNLKIANIDVVPDGRGGVYTVVVCSLGRATGA
Ga0180217_1035242	Ga0180217_10352425	F072045	VPVLHVRKPNEAPPPSRSSRAVREQQQKYDEFVRKIDANDVGDLELEPNENLRSVKVRLRRASSRLGVDIDIWDANGHVYFQRVTRRGRRRQA
Ga0180217_1041676	Ga0180217_10416762	F091556	MELFSLFIGWHPDDVFLRQVSVDMAELIIVFSTIAATLGVMVVFGNWWSR
Ga0180217_1044079	Ga0180217_10440793	F028447	MPDSPTPKPPPVERVDRFWTPDNPDGSGWADVDWVSAIQGSRYHYRHGAPFDEALAVLPPFYRVVTRLESDELIPHENSYYIPREQLGNFLAEMALAGGIEQVWHVEPCADPPAESRVRPPD
Ga0180217_1056007	Ga0180217_10560072	F037930	MTTSFTSSGKPKRTIASIQVERRYANVIRLFLAGELPDFNHQRHVHVANILRHLPYGRELMHLGLQVMAYRHFVPDKYSAEITDRYWAQLDGTLPDPAAFDDLPGGASGRPH
Ga0180217_1071405	Ga0180217_10714052	F007999	VDPNRLDTIAARGDQARRNLVAALRECGELADAVEHFEGDELLEVLAHIDSLRFVMAESSQLLQGVVRGFER
Ga0180217_1078522	Ga0180217_10785222	F036417	MVYYARVPLRKLIPTVLVRLETDDGAVTFRARWKRSALELQRVILFRLRHGRMLWFEDERGHDLCFRPERISGAVVDGRRIRE
Ga0180217_1078728	Ga0180217_10787281	F104508	MLREALELQILEQDPEAAAGVLGTGVSEHGATQVAEVLLEATAVALRRMVAITDEAFDLAELLTKLALDGAVPEHRLELLTEILTAAAATAGGIRPSIDALARRLGEQDLLFGAWLGTLTGLRVVAMATEVTEAELTEDVLLAFEVFPAGDDAPAEG
Ga0180217_1081519	Ga0180217_10815191	F011188	MDTYNIYMDETQVGEFDDEAYEVEFRVVPATKDDSDQQEAVVAGLDLVDLINLRDSLQQEIDNYALQALEAQAEAAEEAALDLDEG
Ga0180217_1083512	Ga0180217_10835123	F075144	PPMTTTRSVFLMSVQELVIAPRPNVGPKLDTVGPCQTRAWLSNPTIPMDLTTL
Ga0180217_1090401	Ga0180217_10904012	F097375	MDQSTTAIPNPLCEVGRTHPRDKHRMKPVEGYPGVWECAKHGIFATVLPEDVAASIERGSPYTMHNGEQGVAGRTGDDRPGGIVFYYRPERA
Ga0180217_1103400	Ga0180217_11034002	F037930	MTTFTKSGKPKRSIASMQIERRYRNVLTLFLSGQLPNFSHQRHVHVANILKHIPYGRELMHLGLQTMTYRQFVVGKYSAEITDFYWDQLDGTLPDPSVFDDLPGGADGTTGATPAACHQPDAGS
Ga0180217_1156722	Ga0180217_11567222	F007999	MNDLSRSNFQRGAQARQNLVSALRECGELADAVEHFEGQELLDVLLYLDGLRYVMAESGQLLQGVVRGHEG
Ga0180217_1159749	Ga0180217_11597491	F097375	MEQQSSGPNPLCEVGKTHPRDRHRMRPVEGHPGVWTCAKHDLFATVVDKEQAEAIERGDPFPMHDGTAGVASRVGDERPNGVILYYRAADDN
Ga0180217_1160773	Ga0180217_11607731	F104646	MSQTQTSGPNPPCEVGRNHPRDRHRMKPLADFPGVWECSRHEMFARIVPQEEADNLKRGDTIEMHSGGEGVVVRHGDERLGGVLIYYRAR
Ga0180217_1164836	Ga0180217_11648361	F019412	LRRWIRELGRHHLLHLDAMQILVLVLCTKGRSLRQAIADDARLESFGLQVTKETQPGRAPGWLKLHGTDRTRGALNIEWDSESSLLRARVITRGTRKPSPIVGEFVNYLLARFSSRIVSITTAFR

Scaffold ID

Protein ID

Family

Sequence

Ga0180217_1000024

Ga0180217_1000024174

F104508

MDLPDMLREALELQILEQDPEAAAGVVGSGVQEHGAAQVSQVLLEATAVALRRMVEITDEAFDAADLLAKLALDGAVPEHRLELLTEVLVAAAATAGGIRPSIDAMHQRLGDQDLVFGAWLGTLTGLRVVAMATESTEAEVVEDVVAAFEVPALEGPPSDDAADG

Ga0180217_1000051

Ga0180217_100005187

F031471

MRLTGFEAIEYAEKEGLTLHKSEDEFDPARSNLTIAEAEAIATEDPDLIWLEVPEDEYYGERKNMEPNR

Ga0180217_1000252

Ga0180217_100025242

F067546

MASVAPQRAPLSVRTEGPAIVLTLCEQLDDLTGPVLVDAVASAVATAPQRVEIDLTELLGWTDAGAQSLVRCRELCRDLPDGLHYRTGRGPGRDALLAAYR

Ga0180217_1000252

Ga0180217_100025257

F050234

VVPPWWLLIPMLEFPVLMALLDCWQRPPEHFAEGAEDRRAWLRWLLVAVLTVPVLLGYGIILGYFYAVVRRNSPASPR

Ga0180217_1003629

Ga0180217_10036296

F067546

MSSLASPRAPVTVRTEGDAVVLALADDLDAATGRALVSAVATAVAAGPQRVDIDLTAITRWTDEGATSLVRCRALCRELPEGLHYRTGRGPGRDALLAAYR

Ga0180217_1007323

Ga0180217_10073236

F050234

VIPPWPLLVLLLEFPVLMALLDCWQRPAEQFAEGAADRRAWLRWLLVAVVTIPVLVGYGIVLGYYYAVVRRRSPSAPG

Ga0180217_1007420

Ga0180217_10074201

F036409

PETKKWKGPVVEAPFNDWNIDGGCPNFDAAGNIMIWSAGYDRGPDVITGGESGAGGVYDLYWLPTSEVIDYYKKAAGIG

Ga0180217_1019691

Ga0180217_10196914

F059781

VHPERRLRIVTETARAVLDGRLDPRDGASTLTMQQAQITERLRSDRIDVTQAEADQVALTLRRLAEQVTDRGGSPDAVEAQQEIARILGELAQTLR

Ga0180217_1022413

Ga0180217_10224133

F085354

MAKKLAATSPAPSQPKPEERFVELMLVAADFVQSCGGLEPAKKALADAGKFVESAGSVESATRALEVLESLKQKIGT

Ga0180217_1029898

Ga0180217_10298982

F054879

MLDLPASDTRVFLFHAEDAAADPSAAMDRVNNWLAKDRSSSAYPNLKIANIDVVPDGRGGVYTVVVCSLGRATGA

Ga0180217_1035242

Ga0180217_10352425

F072045

VPVLHVRKPNEAPPPSRSSRAVREQQQKYDEFVRKIDANDVGDLELEPNENLRSVKVRLRRASSRLGVDIDIWDANGHVYFQRVTRRGRRRQA

Ga0180217_1041676

Ga0180217_10416762

F091556

MELFSLFIGWHPDDVFLRQVSVDMAELIIVFSTIAATLGVMVVFGNWWSR

Ga0180217_1044079

Ga0180217_10440793

F028447

MPDSPTPKPPPVERVDRFWTPDNPDGSGWADVDWVSAIQGSRYHYRHGAPFDEALAVLPPFYRVVTRLESDELIPHENSYYIPREQLGNFLAEMALAGGIEQVWHVEPCADPPAESRVRPPD

Ga0180217_1056007

Ga0180217_10560072

F037930

MTTSFTSSGKPKRTIASIQVERRYANVIRLFLAGELPDFNHQRHVHVANILRHLPYGRELMHLGLQVMAYRHFVPDKYSAEITDRYWAQLDGTLPDPAAFDDLPGGASGRPH

Ga0180217_1071405

Ga0180217_10714052

F007999

VDPNRLDTIAARGDQARRNLVAALRECGELADAVEHFEGDELLEVLAHIDSLRFVMAESSQLLQGVVRGFER

Ga0180217_1078522

Ga0180217_10785222

F036417

MVYYARVPLRKLIPTVLVRLETDDGAVTFRARWKRSALELQRVILFRLRHGRMLWFEDERGHDLCFRPERISGAVVDGRRIRE

Ga0180217_1078728

Ga0180217_10787281

F104508

MLREALELQILEQDPEAAAGVLGTGVSEHGATQVAEVLLEATAVALRRMVAITDEAFDLAELLTKLALDGAVPEHRLELLTEILTAAAATAGGIRPSIDALARRLGEQDLLFGAWLGTLTGLRVVAMATEVTEAELTEDVLLAFEVFPAGDDAPAEG

Ga0180217_1081519

Ga0180217_10815191

F011188

MDTYNIYMDETQVGEFDDEAYEVEFRVVPATKDDSDQQEAVVAGLDLVDLINLRDSLQQEIDNYALQALEAQAEAAEEAALDLDEG

Ga0180217_1083512

Ga0180217_10835123

F075144

PPMTTTRSVFLMSVQELVIAPRPNVGPKLDTVGPCQTRAWLSNPTIPMDLTTL

Ga0180217_1090401

Ga0180217_10904012

F097375

MDQSTTAIPNPLCEVGRTHPRDKHRMKPVEGYPGVWECAKHGIFATVLPEDVAASIERGSPYTMHNGEQGVAGRTGDDRPGGIVFYYRPERA

Ga0180217_1103400

Ga0180217_11034002

F037930

MTTFTKSGKPKRSIASMQIERRYRNVLTLFLSGQLPNFSHQRHVHVANILKHIPYGRELMHLGLQTMTYRQFVVGKYSAEITDFYWDQLDGTLPDPSVFDDLPGGADGTTGATPAACHQPDAGS

Ga0180217_1156722

Ga0180217_11567222

F007999

MNDLSRSNFQRGAQARQNLVSALRECGELADAVEHFEGQELLDVLLYLDGLRYVMAESGQLLQGVVRGHEG

Ga0180217_1159749

Ga0180217_11597491

F097375

MEQQSSGPNPLCEVGKTHPRDRHRMRPVEGHPGVWTCAKHDLFATVVDKEQAEAIERGDPFPMHDGTAGVASRVGDERPNGVILYYRAADDN

Ga0180217_1160773

Ga0180217_11607731

F104646

MSQTQTSGPNPPCEVGRNHPRDRHRMKPLADFPGVWECSRHEMFARIVPQEEADNLKRGDTIEMHSGGEGVVVRHGDERLGGVLIYYRAR

Ga0180217_1164836

Ga0180217_11648361

F019412

LRRWIRELGRHHLLHLDAMQILVLVLCTKGRSLRQAIADDARLESFGLQVTKETQPGRAPGWLKLHGTDRTRGALNIEWDSESSLLRARVITRGTRKPSPIVGEFVNYLLARFSSRIVSITTAFR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300017540: Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C BE-Lig OP (version 2)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences