Metagenome / Metatranscriptome Family F065861

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065861
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	63 residues
Representative Sequence	MGIIIVIRRKISLIYRENSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT
Number of Associated Samples	92
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.20 %
% of genes near scaffold ends (potentially truncated)	37.01 %
% of genes from short scaffolds (< 2000 bps)	85.83 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (67.717 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (62.205 % of family members)
Environment Ontology (ENVO)	Unclassified (92.126 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (66.142 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92 1TahiMoana_10030982 2supr62_10041432 3Deep_10303281 4Vondamm_100077122 5Ga0066855_103179251 6Ga0066854_101068931 7Ga0066839_101035762 8Ga0066383_100390151 9Ga0066368_101327232 10Ga0066368_102853732 11Ga0066374_101343302 12Ga0066375_100602482 13Ga0081602_10042198 14Ga0068504_11176432 15Ga0068471_13210772 16Ga0068472_103068022 17Ga0068488_12286282 18Ga0068482_13035992 19Ga0068481_14792722 20Ga0068503_102827383 21Ga0099697_12968761 22Ga0005502_12902992 23Ga0079249_15349422 24Ga0066376_106580232 25Ga0066367_11759172 26Ga0105711_13383822 27Ga0114996_100494722 28Ga0114996_104203092 29Ga0114996_105072112 30Ga0114996_106001572 31Ga0114996_107455281 32Ga0114996_109191211 33Ga0114993_100884732 34Ga0114993_105594651 35Ga0114993_108320671 36Ga0114993_112335801 37Ga0115002_102777551 38Ga0115002_108550021 39Ga0114999_104724611 40Ga0114999_108489902 41Ga0114999_113218041 42Ga0133547_108429052 43Ga0133547_118903131 44Ga0138381_1565711 45Ga0138392_10232332 46Ga0138382_11341082 47Ga0138399_10994241 48Ga0138398_10204711 49Ga0138398_12493421 50Ga0211679_10559741 51Ga0211680_102701681 52Ga0211575_103116532 53Ga0211553_102539551 54Ga0211670_103751802 55Ga0206695_10794371 56Ga0206695_13745891 57Ga0206695_14725511 58Ga0232639_12169232 59Ga0232646_11624112 60Ga0232637_106670471 61Ga0208329_10067992 62Ga0208470_10387592 63Ga0208055_10018971 64Ga0208336_10113602 65Ga0208831_10128282 66Ga0208571_10010152 67Ga0208570_10415602 68Ga0208471_10357361 69Ga0208747_10620031 70Ga0208747_10928881 71Ga0207963_10036742 72Ga0208113_10042452 73Ga0208391_10181322 74Ga0208895_11771742 75Ga0208131_10980272 76Ga0208879_11226122 77Ga0207991_10066092 78Ga0209753_11348371 79Ga0209554_11158601 80Ga0209445_10477022 81Ga0209445_10870152 82Ga0209445_11132812 83Ga0209035_102946452 84Ga0209089_101526921 85Ga0209089_101614162 86Ga0209089_103033502 87Ga0209089_103218212 88Ga0209501_100815832 89Ga0209501_102348072 90Ga0209402_105839951 91Ga0257113_10570562 92Ga0257113_11793111 93Ga0308140_10210052 94Ga0308136_10270332 95Ga0308136_10618811 96Ga0308131_10055881 97Ga0308131_10904352 98Ga0308145_10117952 99Ga0308145_10355721 100Ga0308135_10095741 101Ga0308135_10660742 102Ga0308125_10375922 103Ga0308125_10825112 104Ga0302132_101326852 105Ga0302119_102022251 106Ga0302118_100216884 107Ga0302133_101828751 108Ga0302133_105419161 109Ga0302139_100991802 110Ga0310122_101910061 111Ga0310123_109357461 112Ga0310120_104254602 113Ga0310124_105390092 114Ga0310125_101677432 115Ga0315329_105937342 116Ga0315305_10653172 117Ga0315305_10999001 118Ga0315303_10737232 119Ga0315301_10544172 120Ga0310345_102338212 121Ga0310345_103477972 122Ga0310342_1009780492 123Ga0310342_1011973702 124Ga0310342_1020357562 125Ga0310342_1027223401 126Ga0315299_14500_1_174 127Ga0315300_050504_46_246
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92 1TahiMoana_10030982 2Deep_10303281 3Ga0066855_103179251 4Ga0081602_10042198 5Ga0114996_100494722 6Ga0114993_105594651 7Ga0114999_104724611 8Ga0208055_10018971 9Ga0208747_10620031 10Ga0209554_11158601 11Ga0308140_10210052 12Ga0308145_10355721 13Ga0308125_10375922 14Ga0310124_105390092
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66 1Ga0068488_12286282 2Ga0066376_106580232 3Ga0114996_100494722 4Ga0114996_109191211 5Ga0114993_108320671 6Ga0114993_112335801 7Ga0115002_102777551 8Ga0114999_113218041 9Ga0138398_10204711 10Ga0211670_103751802 11Ga0206695_10794371 12Ga0206695_13745891 13Ga0209753_11348371 14Ga0209554_11158601 15Ga0209035_102946452 16Ga0257113_10570562 17Ga0308140_10210052 18Ga0308131_10055881 19Ga0308145_10117952 20Ga0302133_105419161 21Ga0310120_104254602 22Ga0315303_10737232 23Ga0310345_103477972 24Ga0310342_1027223401
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.57% β-sheet: 0.00% Coil/Unstructured: 40.43%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF00185	OTCace	22.83
PF00127	Copper-bind	13.39
PF02729	OTCace_N	5.51
PF10431	ClpB_D2-small	3.94
PF06418	CTP_synth_N	1.57
PF04963	Sigma54_CBD	1.57
PF04552	Sigma54_DBD	0.79

Showing 1 to 7 of 7 entries

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COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1508	DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog	Transcription [K]	2.36
COG0504	CTP synthase (UTP-ammonia lyase)	Nucleotide transport and metabolism [F]	1.57

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.72 %
Unclassified	root	N/A	32.28 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.72 %
Unclassified	root	N/A	32.28 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.72 %
Unclassified	root	N/A	32.28 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	55.91 %
Unclassified	root	N/A	32.28 %

Name	Rank	Taxonomy	Distribution
Candidatus Marinimicrobia	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	55.91 %
Unclassified	root	N/A	32.28 %

Name	Rank	Taxonomy	Distribution
Candidatus Marinimicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1.57 %
Candidatus Marinimicrobia bacterium PRS2	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium PRS2	50.39 %
Unclassified	root	N/A	32.28 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001679\|TahiMoana_1003098	Not Available	8810	Open in IMG/M
3300001768\|supr62_1004143	Not Available	3615	Open in IMG/M
3300001781\|Deep_1030328	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium PRS2	1304	Open in IMG/M
3300001783\|Vondamm_10007712	Not Available	4803	Open in IMG/M
3300005431\|Ga0066854_10106893	Not Available	933	Open in IMG/M
3300005594\|Ga0066839_10103576	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia	987	Open in IMG/M
3300005953\|Ga0066383_10039015	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium PRS2	1526	Open in IMG/M
3300006002\|Ga0066368_10132723	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium PRS2	854	Open in IMG/M
3300006002\|Ga0066368_10285373	Not Available	559	Open in IMG/M
3300006012\|Ga0066374_10134330	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium PRS2	717	Open in IMG/M

Showing 1 to 10 of 125 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	7.09%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.79%
Oceanic	Environmental → Aquatic → Marine → Oceanic	88.19%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.94%

Habitat	Taxonomy	Distribution
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	4.72%
Black Smokers	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers	0.79%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	3.15%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.57%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	81.89%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	3.15%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.94%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Black Smokers Hydrothermal Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume	0.79%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	7.09%
Diffuse Hydrothermal Fluid	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluid	0.79%
Diffuse Vent Fluid, Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Vent Fluid, Hydrothermal Vents	0.79%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	1.57%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	0.79%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	2.36%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	62.20%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.51%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	4.72%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.94%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.57%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	4.72%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.36%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.79%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001679	Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific Ocean	Environmental	Open in IMG/M
3300001768	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Deep Background Supr62	Environmental	Open in IMG/M
3300001781	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Deep Sites	Environmental	Open in IMG/M
3300001783	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Sites	Environmental	Open in IMG/M
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental	Open in IMG/M
3300005431	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV75	Environmental	Open in IMG/M
3300005594	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82	Environmental	Open in IMG/M
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental	Open in IMG/M
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental	Open in IMG/M
3300006012	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A	Environmental	Open in IMG/M

Showing 1 to 10 of 92 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TahiMoana_10030982	3300001679	Black Smokers Hydrothermal Plume	MGIIIVIRRKISLIYRENSFIFNLPFRVVLFMIRGEIIGRNNISAVLPTLEEGLLHKNKLVLNCLT*
supr62_10041432	3300001768	Hydrothermal Vent Plume	MGIIIVIRRKISLIYRENSFIFAVPLRVVLYRIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT*
Deep_10303281	3300001781	Hydrothermal Vent Plume	SFIFNLPISMLLFVFRRDIIGRNKNSAAIPTLEEGLLHKNKRVLNYLT*
Vondamm_100077122	3300001783	Hydrothermal Vent Plume	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNISAVLPTLEEGLLHKNKLVLNCLT*
Ga0066855_103179251	3300005402	Marine	MGIIIVIRRKISLIYRENSFTFNPPFGVVLFMIRGEIKGCNNISAAIPTLEE
Ga0066854_101068931	3300005431	Marine	MGIIIVIRRKISLIYRENCFIFSLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT*
Ga0066839_101035762	3300005594	Marine	MGIIIVIRRKISLIYRENCFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNNLVLNCLI*
Ga0066383_100390151	3300005953	Marine	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT*
Ga0066368_101327232	3300006002	Marine	VIRRKISLIYRENCFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNNLVLNCLT*
Ga0066368_102853732	3300006002	Marine	MGIIIVIRRKISLIYRKNCFIFNLPFRVVLFMIRGEIIGRNNVSAAIPTLEEGLLHKNNLVINCLT*
Ga0066374_101343302	3300006012	Marine	MGIIIVIRRKISLIYRENCFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNRLVLNCLT*
Ga0066375_100602482	3300006019	Marine	TGKMGIIIVIRRKISLIYRENCFIFNLPFRVVLFMIRGRIIGRNNISAVLPTLEEGLLHKNKLVLNCLT*
Ga0081602_10042198	3300006080	Diffuse Hydrothermal Fluid	LIYRKNSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLTLGEGNAFIF*
Ga0068504_11176432	3300006304	Marine	MGIIIVIRRKISLIYRENSFIFNLPFRVVLFMIRGEIIGRNDISAAIPTLEEGLLHKNNLVLNCLT*
Ga0068471_13210772	3300006310	Marine	MGIIIVIRRKISLIYRENSYIFNLPFRVVLFMIRGEIIGCNNIYAAIPTLEEGLLHKNKLVLNCLT*
Ga0068472_103068022	3300006313	Marine	MGIIIVIRRKISLIYRKNSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT*
Ga0068488_12286282	3300006331	Marine	MGIIIVIRRKISLIYRENSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT*
Ga0068482_13035992	3300006338	Marine	MGIIIVIRRKISLIYRENCIIFNPPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT*
Ga0068481_14792722	3300006339	Marine	MGIIIVIRRKISLIYRENSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNNLVINCLT*
Ga0068503_102827383	3300006340	Marine	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT*
Ga0099697_12968761	3300006347	Marine	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNRLVLNCLT*
Ga0005502_12902992	3300006716	Deep Ocean	MGIVIVIRRKISLIYRKNSFIFNPPLRVVLFMIRGEIIGCNNISAAIPTLEEGLLHKNKLVLNCLT*
Ga0079249_15349422	3300006731	Marine	IRRKISLIYRKNSFTFALPFRAVLFKIGGKIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0066376_106580232	3300006900	Marine	IRRKISLIYRKNSFIFNLPISMLLFVFRRDIIGSNNNSAAIPTLEEGLLHKNKRVLNYLT
Ga0066367_11759172	3300007291	Marine	MGIIIVIRRKISLIYRKNSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNRLVLNCLT*
Ga0105711_13383822	3300007777	Diffuse Vent Fluid, Hydrothermal Vents	MGIIIVIRRKISLIYRENSFIFNLRFRVVLFMIRGEIIGRNNVSAAIPTLEEGLLHKNKLVLNCLT*
Ga0114996_100494722	3300009173	Marine	MGIIIMIGRKLSLIYRKNSFIFDLPLRAILFGIRGAFIERNNNFAAIPTSEEGLLHKNNLVLN*
Ga0114996_104203092	3300009173	Marine	MGIIIVIRRKISLIYRKNSFIFNPLFRVVLSMIRGEIIGRNNLSAAIPTLEEGLLHKNKLVLNCLT*
Ga0114996_105072112	3300009173	Marine	MGIIILIRRKISLINRKNSFTFALPFRVVLFKIGGEIIGRNNNSAAIPTLEEGLLHKNKLVLNY*
Ga0114996_106001572	3300009173	Marine	MGIIIVIRRKISLIYRKNSFIFDLPFRVVLFRIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNYLT*
Ga0114996_107455281	3300009173	Marine	MIRRKISLIYRKNSFIFNLPVRVVLFRIRGEIIGRNNISAVLPTLEEGLLHKNKLVLNCLT*
Ga0114996_109191211	3300009173	Marine	GKMGIIIVIRRKMSLIFRENSFIFNLPLRVVLFMIKGGIIGYNNISAAIPTLEEGLLHKNKLVLNCST*
Ga0114993_100884732	3300009409	Marine	MGIIIMIGRKLSLIYRKNSFIFDLPLRAILFRIRGAFIGRNNNFAAIPTSEEGLLHKNNLVLN*
Ga0114993_105594651	3300009409	Marine	KISLIYRKNSFIFNLPFRVVLFMFRGEIIGHNNISAAIPTPGGGTSAQKLVLNCLT*
Ga0114993_108320671	3300009409	Marine	MGIIIVIRRKISLIYRENSFTFAVSLRVVLYRIRGKIIGRNNNSAAIPTLEEGLLHKNKLVLNYLT*
Ga0114993_112335801	3300009409	Marine	TGKMGIITVIRRKISLIYRKNSFIFNLLFGTLLFMFRVEILGRNKNFAAIPTLEEGLLHKNKLVLNCLT*
Ga0115002_102777551	3300009706	Marine	MGIVIVIKRKISLIYRKNSFIFNHPSKVVLYRIRGKMIGRNNNSAAIPTLEEALLHKNKLVLNCLT*
Ga0115002_108550021	3300009706	Marine	MGIIIMIRRKISLIYRKNSFIFNLPVRVVLFRIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT*
Ga0114999_104724611	3300009786	Marine	MGIIIMIRRKISLIYRKNSFIFNLPVRVVLFRIRGEIIGRNNISA
Ga0114999_108489902	3300009786	Marine	MGIIIVIRRKISLIYRKNSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLALNCLT*
Ga0114999_113218041	3300009786	Marine	MGIIILIRRKISLINRKNSFTFALPFRVVLFKIGGEIIGRNNNSAAIPTLEEGLLHKNKL
Ga0133547_108429052	3300010883	Marine	MGIIIVIRRKIIVIRRKMSLIFRENSFIFNLPLRVVLFMIKGGIIGYNNISAAIPTLEEGLLHKNKLVLNCST*
Ga0133547_118903131	3300010883	Marine	MGTIIVIRGKISLIYRENSFTFAISLRVVLYRIRGKFIGRNNNFAAIPTLEEGLLHKNKLVLNYLT*
Ga0138381_1565711	3300011290	Marine	IVIRRKISLIYRKNSFIFNLPFRVVLFMIRGEIIGRNNISAALPTLEEGLLHKNNLVINCLT*
Ga0138392_10232332	3300011313	Marine	MGIIIVIRRKISLIYRENSIIFDLSFRVVLFKIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLDCLT*
Ga0138382_11341082	3300011314	Marine	MGIIIVIRRKISLIYRENSITFDLPFRVVLFMIRGEIIGPNNNSAAIPTLEEGLLHKNKLVLNCLT*
Ga0138399_10994241	3300011316	Marine	FIFDLSISMLLFVFRRDIIGRNNNSAAIPTLEEGLLHKNRLVLNCLT*
Ga0138398_10204711	3300011327	Marine	MGIIIEIRRKISLIYRENCFIFSLRFRVVLFMIRGETIGLNNNSAAIPTLEEGLLHKNKLVLNYLT*
Ga0138398_12493421	3300011327	Marine	KGIIIVIRRKISLIYRENSIIFDLPFGVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT*
Ga0211679_10559741	3300020263	Marine	MGIIIMIRRKISLIYRKNSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT
Ga0211680_102701681	3300020389	Marine	MGIIIVIRRKISLIYRKNSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT
Ga0211575_103116532	3300020407	Marine	MGIIIVIRRKISLIYRENCFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT
Ga0211553_102539551	3300020415	Marine	MGIIIVIRRKISLIYRKNSFIFNLPFRVVLFMIRGEIIGRNNVSAAIPTLEEGLLHKNKLVLNCLT
Ga0211670_103751802	3300020434	Marine	MGIIIMIRRKISLINRENSFTFNPPPRVVLFMIRGDILGCNSISAAIPTLEEGLLHKNKLVLNCLT
Ga0206695_10794371	3300021348	Seawater	MIRRKISLIYRENRFIFNLPLRAVLFMIRGEIIGRNNISAAIPTLEEGLLQKNKLVLNY
Ga0206695_13745891	3300021348	Seawater	MDIIIVIRRKLSLIYRKNSFIFDLPLRVVLFRIRGGFLGCNNNSAAIPTLEEGLLHKNKLVLNYLT
Ga0206695_14725511	3300021348	Seawater	MGIIIVIRRKISLIYRKNSFIFNLPFRVVLLMIRGEIIGCNNVSAAIPTLEEGLLHKNRLVLNCLT
Ga0232639_12169232	3300021977	Hydrothermal Vent Fluids	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0232646_11624112	3300021978	Hydrothermal Vent Fluids	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNRLVLNCLT
Ga0232637_106670471	3300021980	Hydrothermal Vent Fluids	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNNFAAIPTLEEGLLHKNKLVLNCLA
Ga0208329_10067992	3300025211	Deep Ocean	MGIIIVIRGKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0208470_10387592	3300025219	Deep Ocean	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNNSAVLPTLEEGLLHKNKLVLNCLT
Ga0208055_10018971	3300025220	Deep Ocean	LIYRENSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKL
Ga0208336_10113602	3300025221	Deep Ocean	MGIIIVIRRKISLIYRENSFTFNLPFRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0208831_10128282	3300025222	Deep Ocean	MGIIIVIRRKISLIYRENSIIFDLAFRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0208571_10010152	3300025232	Deep Ocean	LIYRENSIIFDLPFRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0208570_10415602	3300025249	Deep Ocean	MGIIIVIRRKISLIYRGNSITFDLPFRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0208471_10357361	3300025255	Deep Ocean	MGIIIVIRRKISLIYRENSFIFNPPFKVVLFMIRGEIIGRNNNFAAIPTLEEGLLHKNKRVLNYLT
Ga0208747_10620031	3300026074	Marine	MGVIIMIRRKISLIYWKKSFTFDPPPRVILFMIRGGVIGHNNISAAIPTLEEGLL
Ga0208747_10928881	3300026074	Marine	MGIIIVIRRKISLIYRENSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT
Ga0207963_10036742	3300026080	Marine	MGIIIVIRRKISLIYRENCFIFNLPFRVVLFMIRGEIIGRNNISAVLPTLEEGLLHKNKLVLNCLT
Ga0208113_10042452	3300026087	Marine	MGIIIVIRRKISLIYRENCFIFNLPFRVVLFMIRGEIIGRNNISAALPTLEEGLLHKNKLVLNCLT
Ga0208391_10181322	3300026108	Marine	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNISAVLPTLEEGLLHKNKLVLNY
Ga0208895_11771742	3300026207	Marine	MKDWLNTLLFIRIIIVIRRKISLIYRENCFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNNLVLNCLI
Ga0208131_10980272	3300026213	Marine	MGIIIVIRRKISLIYRENSVIFYLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNNLVLNCLI
Ga0208879_11226122	3300026253	Marine	MGIIIVIRRKISLIYRENSFIFILPFRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNRLVLNY
Ga0207991_10066092	3300026264	Marine	LIYRENSFIFNLPFRVVLFMIRGEIIGRNNVSAAIPTLEEGLLHKNKLVLNCLT
Ga0209753_11348371	3300027622	Marine	MIWGKISLIYRKNSYIFNLPFRVVLFMIRGEIIGRNNVSAAIPTLEEGLLHKNKLVLNCL
Ga0209554_11158601	3300027685	Marine	IIVIRRKISLIYGENSYIFNLLISMLLFVFRRSIIGCNNNSAAIPTLEEGLLHKNKLVLN
Ga0209445_10477022	3300027700	Marine	MGIIIVIRGKISLIYRENSLIFNLPFRVVLFMIRGETIGLNNNSAAIPTLEEGLLHKNKLVLNYLT
Ga0209445_10870152	3300027700	Marine	IYRENSFIFNLPFRVVLFMIRGEIIGRNNISAVLPTLEEGLLHKNRLVLNCLT
Ga0209445_11132812	3300027700	Marine	IYRENSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT
Ga0209035_102946452	3300027827	Marine	GIIIMIRRKISLIYRKNSFIFNLPERVVLFRIGGDIIGHNNISAAIPTLEEGLLHKNKLVLNCLT
Ga0209089_101526921	3300027838	Marine	VIRRKISLIYRKNSFIFNLPFRVILFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCL
Ga0209089_101614162	3300027838	Marine	MGIIIMIRRKISLIYRKNSFIFNLPVRVVLFRIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT
Ga0209089_103033502	3300027838	Marine	MGIIIMIGRKLSLIYRKNSFIFDLPLRAILFRIRGAFIGRNNNFAAIPTSEEGLLHKNNLVLN
Ga0209089_103218212	3300027838	Marine	MGIIILIRRKISLINRKNSFTFALPFRVVLFKIGGEIIGRNNNSAAIPTLEEGLLHKNKLVLNY
Ga0209501_100815832	3300027844	Marine	MGIIIMIRRKISLIYRKNSFIFNLPVRVVLFRIRGEIIGRNNISAVLPTLEEGLLHKNKLVLNCLT
Ga0209501_102348072	3300027844	Marine	MGIIIMIGRKLSLIYRKNSFIFDLPLRAILFGIRGAFIERNNNFAAIPTSEEGLLHKNNLVLN
Ga0209402_105839951	3300027847	Marine	LINRKNSFTFALPFRVVLFKIGGEIIGRNNNSAAIPTLEEGLLHKNKLV
Ga0257113_10570562	3300028488	Marine	MGIIIVIRGKISLIYRENSLIFNLPFRVVLFVIRGETIGLNNNSAAIPTLEEGLLHKNKLVLNYLT
Ga0257113_11793111	3300028488	Marine	IIVIRRKISLIYRENSFIFNLPFRVVLFMIRGKIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0308140_10210052	3300030727	Marine	GINIYNQDKKSLIYKENSFTFNLPISMLLLVLRRDAGCNNDFAAIPTFGGGLLHKNKLVLNCLT
Ga0308136_10270332	3300030728	Marine	RKISLIYRKNSFIFDLPFRVVLFRIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNYLT
Ga0308136_10618811	3300030728	Marine	IRRKISLIYRKNSFIFNLPVRVVLFRIRGRIIGRNNVSAVLPTLEEGLLHKNKLVLNCLT
Ga0308131_10055881	3300030729	Marine	IGMIIVIRIKISLIYRKNSFTFALPFRVVLFKIGGGIIGRNNNSAAIPTLEEGLLHKNKLVLNYLT
Ga0308131_10904352	3300030729	Marine	MIRKKISLIYRKNSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCL
Ga0308145_10117952	3300031378	Marine	IRRKISLIYRKNSFIFNLPVRVVLFRIRGEIIGRNNVSAVLPTLEEGLLHKNKLVLNCLT
Ga0308145_10355721	3300031378	Marine	KISLIYRENSFTFAISLRVVLYRIRGKIIGRNNNSAAIPTLEEGLLHKNKLVLNYLT
Ga0308135_10095741	3300031559	Marine	IIVIRRKISLIYRKNSFIFNLPFRVILFMIRGEIIGRNNISAAIPTLEEGLLHKNKLGLNCLT
Ga0308135_10660742	3300031559	Marine	GIIIVIRRKISLIYRENSFTFAVSLRVVLYRIRGKIIGRNNNSAAIPTLEEGLLHKNKLVLNY
Ga0308125_10375922	3300031581	Marine	VIVIKRKISLIYRKNSFIFNHPSKVVLYRIRGKMIGRNNNSAAIPTLEEALLHKNKLVLNCLT
Ga0308125_10825112	3300031581	Marine	RKISLIYRKNSFIFNLPVRVILFRIRGEIIGRNNISAAIPTLEEGLLHKNKLVLNCLT
Ga0302132_101326852	3300031605	Marine	MGIIIVIRRKISLIYRENSFTFAISLRVVLYRIRGKIIGRNNNSAAIPTLEEGLLHKNKLVLNYLT
Ga0302119_102022251	3300031606	Marine	CAGKMGIVIVIKRKISLIYRKNSFIFNHPSKVVLYRIRGKMIGRNNNSAAIPTLEEALLHKNKLVLNCLT
Ga0302118_100216884	3300031627	Marine	MGIVIVIKRKISLIYRKNSFIFNHPSKVVLYRIRGKMIGLNNNSAAIPTLEEALLHKNKLVLNCLT
Ga0302133_101828751	3300031646	Marine	MGIIIVIRRKISLIYRKNSFIFDLPFRVVLFRIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNYLT
Ga0302133_105419161	3300031646	Marine	MGIIVMIREKISLIYRKNSFIFNLPYRVVLFMFRGEIIGRNNISAAIPAPGGGTSAQKLVLNCLT
Ga0302139_100991802	3300031693	Marine	MGIIIVIRRKISLIYRKNSVIFNPLFRVVLSMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0310122_101910061	3300031800	Marine	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNISAALPTLEEGLLHKNKLVLNCLT
Ga0310123_109357461	3300031802	Marine	GKMGIIIVIRRKISLIYRKNSIIFDLPFRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0310120_104254602	3300031803	Marine	MGIIIMIRRKISLINRKNSVTFNPPSRVVLFMIRGEIIGRNNNFAAIPTLEEGLLHKNKLVLNYLT
Ga0310124_105390092	3300031804	Marine	LIYRKNSFIFNLPVRVVLFRIGGEIIGRNNVSAVLPTLEE
Ga0310125_101677432	3300031811	Marine	MGIIIVIRGKISLIYRENSLIFNLPFKVVLFMIRGETIGLNNNSAAIPTLEEGLLHKNKLVLNYLT
Ga0315329_105937342	3300032048	Seawater	MGIIIVIRRKISLIYRENSFIFNLPFRVVLFMIRGEIIGHNNNSAAIPTLEEGLLHKNKRVLNYLT
Ga0315305_10653172	3300032127	Marine	VIRGKISLIYRENSLIFNLPFRVVLFMIRGETIGLNNNSAAIPTLEEGLLHKNKLVLNYL
Ga0315305_10999001	3300032127	Marine	IIVIRRKISLIYWENSFIFNLPYRVVLFMIRGEIIGRNNNSAAIPTLEEGLLHKNKLVLNCLT
Ga0315303_10737232	3300032146	Marine	KISLIYRKNSFIFNPSLRVVLYRIREEIIGSNNNSAAIPTLEEGLLHRNKLVLNYLTLGEGNAFMF
Ga0315301_10544172	3300032161	Marine	IIVIRRKITLIYRKNSFIFNLPFRVVLFMIRGEIIGRNNISAAIPTLEEGLLHKNSLVLNCLT
Ga0310345_102338212	3300032278	Seawater	MGIIIVIRRKISLIYRENSYIFNLPFRVVLFMIRGEIIGCNNISAAIPTLEEGLLHKNKLVLNCLT
Ga0310345_103477972	3300032278	Seawater	MGIIIVIWRKISLIYRKNSFIFNPLFRVVLFMIRGKIVGRNNNSAAIPTLEEGLLQKNKLVLNY
Ga0310342_1009780492	3300032820	Seawater	YAGKMGIIIMIRRKISLINRENSFTFNPPPRVVLFMIRGDILGCNSISAAIPTLEEGLLHKNKLVLNCLT
Ga0310342_1011973702	3300032820	Seawater	MGIIIVIRRKISLIYRENSYIFNLPFRVVLFMIRGEIIGCNNIYAAIPTLEEGLLHKNKLVLNCLT
Ga0310342_1020357562	3300032820	Seawater	MGIIIVIRRKISLIYRKNSYIFNLPFRVVLFMIRGEIIGRNNVSAAIPTLEEGLLHKNRLVLNCLT
Ga0310342_1027223401	3300032820	Seawater	MGVIIMIRRKISLIYWKKSFTFDPPPRVILFMIRGGVIGHNNISAAIPTLEEGLLHKNKLVLNCLT
Ga0315299_14500_1_174	3300034481	Marine	KISLIYSKNSFIFNLPFRVVLFMIRGEIIGRNNVSAAIPTLEEGLLHKNKLVLNCLT
Ga0315300_050504_46_246	3300034679	Marine	MGIIIVIRRKISLIYRENSIIFDLPFRVVLFMIRGEIIGRNNISAALPTLEEGLLHKNNLVLNCLT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters