Metagenome / Metatranscriptome Family F064893

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064893
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	60 residues
Representative Sequence	MSKIVRYEFMGSWLYFWLLCISGIGIPVAILYLLNGTLRIEDEMTDPEQFVSAFRAGRR
Number of Associated Samples	108
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.55 %
% of genes near scaffold ends (potentially truncated)	20.31 %
% of genes from short scaffolds (< 2000 bps)	65.62 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (5.469 % of family members)
Environment Ontology (ENVO)	Unclassified (16.406 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.375 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.32% β-sheet: 0.00% Coil/Unstructured: 43.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF06283	ThuA	4.69
PF01261	AP_endonuc_2	3.91
PF00763	THF_DHG_CYH	3.91
PF00155	Aminotran_1_2	3.12
PF13646	HEAT_2	3.12
PF03551	PadR	2.34
PF00005	ABC_tran	2.34
PF06580	His_kinase	2.34
PF06262	Zincin_1	2.34
PF02518	HATPase_c	1.56
PF05685	Uma2	1.56
PF02882	THF_DHG_CYH_C	1.56
PF07690	MFS_1	1.56
PF12543	DUF3738	1.56
PF04191	PEMT	1.56
PF01966	HD	1.56
PF13458	Peripla_BP_6	1.56
PF00528	BPD_transp_1	0.78
PF15902	Sortilin-Vps10	0.78
PF01578	Cytochrom_C_asm	0.78
PF01590	GAF	0.78
PF01512	Complex1_51K	0.78
PF01594	AI-2E_transport	0.78
PF01381	HTH_3	0.78
PF01128	IspD	0.78
PF07642	BBP2	0.78
PF13560	HTH_31	0.78
PF07676	PD40	0.78
PF00082	Peptidase_S8	0.78
PF01872	RibD_C	0.78
PF13374	TPR_10	0.78
PF13807	GNVR	0.78
PF01432	Peptidase_M3	0.78
PF00884	Sulfatase	0.78
PF01527	HTH_Tnp_1	0.78
PF00326	Peptidase_S9	0.78
PF07992	Pyr_redox_2	0.78
PF12831	FAD_oxidored	0.78
PF04255	DUF433	0.78
PF01597	GCV_H	0.78
PF01121	CoaE	0.78
PF13432	TPR_16	0.78
PF14691	Fer4_20	0.78
PF07786	HGSNAT_cat	0.78
PF08532	Glyco_hydro_42M	0.78
PF01546	Peptidase_M20	0.78
PF07929	PRiA4_ORF3	0.78
PF13532	2OG-FeII_Oxy_2	0.78
PF13620	CarboxypepD_reg	0.78
PF00011	HSP20	0.78
PF03737	RraA-like	0.78
PF05199	GMC_oxred_C	0.78
PF00392	GntR	0.78
PF02954	HTH_8	0.78
PF01029	NusB	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	5.47
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	4.69
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	2.34
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	2.34
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	2.34
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.34
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.34
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.34
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	1.56
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	1.56
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	0.78
COG4656	Na+-translocating ferredoxin:NAD+ oxidoreductase RNF, RnfC subunit	Energy production and conversion [C]	0.78
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	0.78
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.78
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.78
COG2068	CTP:molybdopterin cytidylyltransferase MocA	Coenzyme transport and metabolism [H]	0.78
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.78
COG1894	NADH:ubiquinone oxidoreductase, NADH-binding 51 kD subunit (chain F)	Energy production and conversion [C]	0.78
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.78
COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	Lipid transport and metabolism [I]	0.78
COG1207	Bifunctional protein GlmU, N-acetylglucosamine-1-phosphate-uridyltransferase/glucosamine-1-phosphate-acetyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1164	Oligoendopeptidase F	Amino acid transport and metabolism [E]	0.78
COG0746	Molybdopterin-guanine dinucleotide biosynthesis protein A	Coenzyme transport and metabolism [H]	0.78
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.78
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.78
COG0509	Glycine cleavage system protein H (lipoate-binding)	Amino acid transport and metabolism [E]	0.78
COG0339	Zn-dependent oligopeptidase, M3 family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	33.59 %
Unclassified	root	N/A	12.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.34 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19.53 %
Unclassified	root	N/A	12.50 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.34 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.56 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	9.38 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.25 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Chlorobi	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.25 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	5.47 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	2.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.78 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.78 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.78 %
unclassified Chlorobiota	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3.91 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	1.56 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Terracidiphilus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus	0.78 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.78 %
Chlorobi bacterium OLB7	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobi bacterium OLB7	0.78 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.78 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.78 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.34 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	1.56 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.78 %
unclassified Candidatus Solibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter	0.78 %
Labilitrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae	0.78 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.78 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.78 %
Chlorobi bacterium OLB7	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobi bacterium OLB7	0.78 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.34 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Candidatus Solibacter sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	0.78 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.78 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.78 %
Labilithrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix	0.78 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.78 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.78 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.78 %
Chlorobi bacterium OLB7	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobi bacterium OLB7	0.78 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	12.50 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.34 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Labilithrix luteola	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	0.78 %
Candidatus Solibacter sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	0.78 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.78 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.78 %
Terracidiphilus gabretensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	0.78 %
Singulisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	0.78 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.78 %
Chlorobi bacterium OLB7	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobi bacterium OLB7	0.78 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000227\|TB_AS07_7DRAFT_10008153	All Organisms → cellular organisms → Bacteria	5524	Open in IMG/M
3300001213\|JGIcombinedJ13530_104093460	All Organisms → cellular organisms → Bacteria → Acidobacteria	1243	Open in IMG/M
3300002491\|JGI24187J35170_1003718	All Organisms → cellular organisms → Bacteria	5924	Open in IMG/M
3300002914\|JGI25617J43924_10006863	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3550	Open in IMG/M
3300003666\|L3E_1039695	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300003668\|LSCM4L_1033136	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300003890\|Ga0063162_1096238	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	977	Open in IMG/M
3300004782\|Ga0062382_10001471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6213	Open in IMG/M
3300005332\|Ga0066388_105527122	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005453\|Ga0068705_10002936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	8402	Open in IMG/M
3300005536\|Ga0070697_101623722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	578	Open in IMG/M
3300005545\|Ga0070695_100332765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1132	Open in IMG/M
3300005591\|Ga0070761_10238479	Not Available	1085	Open in IMG/M
3300005712\|Ga0070764_10304040	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300005713\|Ga0066905_102298856	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005764\|Ga0066903_101605996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1233	Open in IMG/M
3300005764\|Ga0066903_103783468	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300005839\|Ga0068707_1001430	All Organisms → cellular organisms → Bacteria	16625	Open in IMG/M
3300005839\|Ga0068707_1098400	Not Available	1084	Open in IMG/M
3300005921\|Ga0070766_10746933	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300006176\|Ga0070765_102067924	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	532	Open in IMG/M
3300006755\|Ga0079222_10518688	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	880	Open in IMG/M
3300006755\|Ga0079222_10670447	Not Available	812	Open in IMG/M
3300006854\|Ga0075425_100188582	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2369	Open in IMG/M
3300006903\|Ga0075426_11151086	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300007072\|Ga0073932_1002358	All Organisms → cellular organisms → Bacteria	29544	Open in IMG/M
3300007072\|Ga0073932_1163249	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300009633\|Ga0116129_1000892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terracidiphilus → Terracidiphilus gabretensis	17483	Open in IMG/M
3300009692\|Ga0116171_10004832	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11982	Open in IMG/M
3300009764\|Ga0116134_1276484	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Chlorobi → unclassified Chlorobiota → Chlorobi bacterium OLB7	578	Open in IMG/M
3300009945\|Ga0117932_1002710	All Organisms → cellular organisms → Bacteria	14493	Open in IMG/M
3300009945\|Ga0117932_1154196	All Organisms → cellular organisms → Bacteria → Acidobacteria	1005	Open in IMG/M
3300010289\|Ga0129299_1019050	All Organisms → cellular organisms → Bacteria	3594	Open in IMG/M
3300010289\|Ga0129299_1028582	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2668	Open in IMG/M
3300010360\|Ga0126372_12518492	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010366\|Ga0126379_13733397	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300010376\|Ga0126381_102499979	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300010379\|Ga0136449_100002895	All Organisms → cellular organisms → Bacteria	51542	Open in IMG/M
3300010379\|Ga0136449_100153004	All Organisms → cellular organisms → Bacteria	4519	Open in IMG/M
3300010379\|Ga0136449_102658532	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300010381\|Ga0136547_102757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2155	Open in IMG/M
3300010397\|Ga0134124_12187651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	592	Open in IMG/M
3300011269\|Ga0137392_10932448	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300012917\|Ga0137395_10727171	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300012944\|Ga0137410_10565573	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	936	Open in IMG/M
3300012971\|Ga0126369_11460910	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300013101\|Ga0164313_11251491	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
(restricted) 3300013123\|Ga0172368_10007262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	11635	Open in IMG/M
(restricted) 3300013125\|Ga0172369_10037880	All Organisms → cellular organisms → Bacteria → Acidobacteria	3909	Open in IMG/M
3300013307\|Ga0157372_11304343	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300014160\|Ga0181517_10040448	All Organisms → cellular organisms → Bacteria → Acidobacteria	2946	Open in IMG/M
3300014164\|Ga0181532_10266678	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300014167\|Ga0181528_10634942	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300014200\|Ga0181526_10814552	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300014492\|Ga0182013_10436021	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300016294\|Ga0182041_11765912	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300016404\|Ga0182037_10562414	Not Available	964	Open in IMG/M
3300016422\|Ga0182039_10239777	All Organisms → cellular organisms → Bacteria → Acidobacteria	1471	Open in IMG/M
3300016750\|Ga0181505_10306206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	620	Open in IMG/M
3300016750\|Ga0181505_10709202	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300017927\|Ga0187824_10205584	Not Available	671	Open in IMG/M
3300017943\|Ga0187819_10623949	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300017946\|Ga0187879_10096571	All Organisms → cellular organisms → Bacteria	1696	Open in IMG/M
3300017946\|Ga0187879_10343910	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300017988\|Ga0181520_11062125	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300018034\|Ga0187863_10572667	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300018042\|Ga0187871_10469131	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300018044\|Ga0187890_10292862	All Organisms → cellular organisms → Bacteria → Proteobacteria	914	Open in IMG/M
3300018476\|Ga0190274_13736079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300020153\|Ga0197142_1029537	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera	2551	Open in IMG/M
3300020812\|Ga0214071_1364374	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300021406\|Ga0210386_10619467	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300021420\|Ga0210394_10012161	All Organisms → cellular organisms → Bacteria → Acidobacteria	8388	Open in IMG/M
3300021433\|Ga0210391_10566300	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300021478\|Ga0210402_10274772	All Organisms → cellular organisms → Bacteria → Acidobacteria	1558	Open in IMG/M
3300021560\|Ga0126371_10063033	All Organisms → cellular organisms → Bacteria	3582	Open in IMG/M
3300022548\|Ga0212092_1016438	All Organisms → cellular organisms → Bacteria	4862	Open in IMG/M
3300022554\|Ga0212093_1004405	All Organisms → cellular organisms → Bacteria	22642	Open in IMG/M
3300022593\|Ga0236338_1013447	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1952	Open in IMG/M
3300024295\|Ga0224556_1094102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	734	Open in IMG/M
3300025463\|Ga0208193_1000218	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	37126	Open in IMG/M
3300025858\|Ga0209099_1052002	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300025891\|Ga0209585_10483044	Not Available	514	Open in IMG/M
3300025906\|Ga0207699_11276533	Not Available	543	Open in IMG/M
3300025910\|Ga0207684_10127316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2186	Open in IMG/M
3300025939\|Ga0207665_10639615	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	833	Open in IMG/M
3300026278\|Ga0209018_1002692	All Organisms → cellular organisms → Bacteria	12128	Open in IMG/M
3300026278\|Ga0209018_1008879	All Organisms → cellular organisms → Bacteria	4271	Open in IMG/M
3300026278\|Ga0209018_1008938	All Organisms → cellular organisms → Bacteria	4244	Open in IMG/M
3300026509\|Ga0209809_1081733	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	871	Open in IMG/M
3300026551\|Ga0209648_10000098	All Organisms → cellular organisms → Bacteria	54942	Open in IMG/M
3300027545\|Ga0209008_1144722	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300027765\|Ga0209073_10102156	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Labilitrichaceae → Labilithrix → Labilithrix luteola	1013	Open in IMG/M
3300027765\|Ga0209073_10413963	Not Available	555	Open in IMG/M
3300027840\|Ga0209683_10007403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4304	Open in IMG/M
3300027854\|Ga0209517_10061963	All Organisms → cellular organisms → Bacteria	2722	Open in IMG/M
3300027857\|Ga0209166_10046615	Not Available	2553	Open in IMG/M
3300027879\|Ga0209169_10583640	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300028536\|Ga0137415_11244277	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300028735\|Ga0272446_1002955	All Organisms → cellular organisms → Bacteria	22228	Open in IMG/M
3300028735\|Ga0272446_1067395	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300028906\|Ga0308309_11491342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	578	Open in IMG/M
3300029397\|Ga0243510_100051	All Organisms → cellular organisms → Bacteria → Acidobacteria	133354	Open in IMG/M
3300031708\|Ga0310686_101446392	All Organisms → cellular organisms → Bacteria	21430	Open in IMG/M
3300031708\|Ga0310686_112143399	All Organisms → cellular organisms → Bacteria	2500	Open in IMG/M
3300031788\|Ga0302319_11142954	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300031812\|Ga0308411_10228359	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031875\|Ga0308405_1002066	All Organisms → cellular organisms → Bacteria	9664	Open in IMG/M
3300031941\|Ga0310912_10296191	All Organisms → cellular organisms → Bacteria → Acidobacteria	1252	Open in IMG/M
3300031966\|Ga0308420_1134662	Not Available	757	Open in IMG/M
3300032059\|Ga0318533_10424505	Not Available	972	Open in IMG/M
3300032059\|Ga0318533_10540849	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300032160\|Ga0311301_10147119	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	4282	Open in IMG/M
3300032160\|Ga0311301_11067694	All Organisms → cellular organisms → Bacteria → Acidobacteria	1056	Open in IMG/M
3300032397\|Ga0315287_11527482	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300032770\|Ga0335085_11070518	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300032893\|Ga0335069_10823175	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300032893\|Ga0335069_12569039	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300033418\|Ga0316625_102084690	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300033485\|Ga0316626_11854619	Not Available	545	Open in IMG/M
3300033983\|Ga0371488_0205312	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300034075\|Ga0373895_065213	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300034088\|Ga0373912_0245430	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300034169\|Ga0370480_0117903	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.19%
Engineered	Engineered	5.47%
Host-Associated	Host-Associated	2.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.34%
Aquatic	Environmental → Aquatic	39.84%
Plants	Host-Associated → Plants	2.34%
Wastewater	Engineered → Wastewater	1.56%
Bioreactor	Engineered → Bioreactor	1.56%
Bioremediation	Engineered → Bioremediation	1.56%
Industrial Production	Engineered → Industrial Production	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.44%
Freshwater	Environmental → Aquatic → Freshwater	20.31%
Thermal Springs	Environmental → Aquatic → Thermal Springs	17.97%
Peat	Environmental → Terrestrial → Peat	2.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.34%
Marine	Environmental → Aquatic → Marine	1.56%
Cave	Environmental → Terrestrial → Cave	1.56%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	1.56%
Metal	Engineered → Bioremediation → Metal	1.56%
Anaerobic	Engineered → Bioreactor → Anaerobic	0.78%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	0.78%
Engineered Product	Engineered → Industrial Production → Engineered Product	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.47%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	15.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.84%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.47%
Lake	Environmental → Aquatic → Freshwater → Lake	3.12%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.34%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	2.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.34%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.56%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	1.56%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.56%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.78%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	0.78%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	0.78%
Bioanode	Engineered → Industrial Production → Engineered Product → Bioanode	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.38%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	9.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.69%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.12%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.34%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	2.34%
Microbial Mats	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats	2.34%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	2.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.34%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.56%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water	1.56%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.56%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	1.56%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.78%
Cave Water	Environmental → Aquatic → Freshwater → Groundwater → Cave Water	0.78%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.78%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.78%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	0.78%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	0.78%
Unclassified	Engineered → Industrial Production → Engineered Product → Bioanode → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.69%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.69%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.91%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.91%
Anoxygenic And Chlorotrophic Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat	3.12%
Anoxygenic And Chlorotrophic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic	3.12%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.12%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.12%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.34%
Hot Spring Phototrophic Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat	2.34%
Hot Spring Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Microbial Mats → Hot Spring Microbial Mat	2.34%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.34%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.56%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.56%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water → Coalbed Water	1.56%
Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Microbial Mat	1.56%
Hot Spring Water Column	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Water Column	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.56%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	1.56%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.56%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Cave Water → Groundwater	0.78%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.78%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.78%
Hot Spring Sediments	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments	0.78%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.78%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.78%
Bioreactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Bioreactor	0.78%
Anode Biofilm	Engineered → Industrial Production → Engineered Product → Bioanode → Unclassified → Anode Biofilm	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000227	Groundwater microbial communities from subsurface biofilms in sulfidic aquifier in Frasassi Gorge, Italy, sample from two redox zones- AS07_7	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002491	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant BLVA 2012	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003666	Lithgow State Coal Mine Metagenomic Study (LSCM3 Early)	Environmental	Open in IMG/M
3300003668	Coalbed water microbial communities from the Lithgow State Coal Mine, New South Wales, Australia (LSCM4 Late Sample 5)	Environmental	Open in IMG/M
3300003890	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cm	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005453	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005839	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP NP MetaG	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007072	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Dewar Creek DC9 2012 metaG	Environmental	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009692	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG	Engineered	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009945	Combined Assembly of Gp0139326, Gp0139349, Gp0139350, Gp0139351	Environmental	Open in IMG/M
3300010289	Hot spring microbial mat communities from California, USA to study Microbial Dark Matter (Phase II) - Cone Pool mat layer C metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010381	Methanogenic microbial communities from bioreactors in Yantai Institute of Oceanology, CAS, Yantai, China ? reactor 2	Engineered	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013101	Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay4, Core 4569-4, 0-3 cm	Environmental	Open in IMG/M
3300013123 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11m	Environmental	Open in IMG/M
3300013125 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.25m	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020153	Sediment microbial communities from Great Boiling Springs, Gerlach, Nevada, United States - GBS 60_MetaG	Environmental	Open in IMG/M
3300020812	Anaerobic digester digestate microbial community, University of Toronto, Ontario, Canada - DG074 megahit	Engineered	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022548	Cone Pool_combined assembly	Environmental	Open in IMG/M
3300022554	Dewar_combined assembly	Environmental	Open in IMG/M
3300022593	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W2	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025858	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHW2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026278	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant BLVA 2012 (SPAdes)	Environmental	Open in IMG/M
3300026509	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028735	Hot spring microbial mat communities from Yellowstone National Park, WY, United States - YNP-CB-006-1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029397	Anode biofilm microbial communities from acetate-fed MFC - AM-anode biofilm	Engineered	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031812	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-BottomLayer	Environmental	Open in IMG/M
3300031875	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MS13	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031966	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS55	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034075	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A4A4.2	Engineered	Open in IMG/M
3300034088	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.1	Engineered	Open in IMG/M
3300034169	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
TB_AS07_7DRAFT_100081532	3300000227	Groundwater	MPKIIRYEFMGSWFRFWLMCLTVVGIPFAVLYLIDGTLRIEHEIDDPERFVEEFRSGRLTKKR*
JGIcombinedJ13530_1040934602	3300001213	Wetland	MSRIVRNEFMGSWLLFWLLCITGIGIPIAGLYLLNGTLRIEDEMADPEQFVSAFRAGKRA
JGI24187J35170_10037184	3300002491	Anoxygenic And Chlorotrophic Microbial Mat	VPKIIRYEFMGSWFRFWVLCLTVVGIPFAILYLINGTLRIEHELEDPESFVEQYRSGKLRRK*
JGI25617J43924_100068633	3300002914	Grasslands Soil	MSKIVRYEFMGSWLRFWLLCISIIGIPLAVLYLVNGTVRIEDELDEPELVLEKLRNRR*
L3E_10396951	3300003666	Coalbed Water	MSKIVRYEFMGSWLYFWLLSITVIGIPLALLYLISGTLRIEHHAIG
LSCM4L_10331362	3300003668	Coalbed Water	MSKIVRYEFMGSWLYFWLLSITVIGIPLALLYLISGTLRIEHQMDDPERFVESFRAGRLAPGPGVSSM*
Ga0063162_10962382	3300003890	Hot Spring Sediments	MSKIIRYEFMGSWFRFWLMCLTVIGIPFAVLYLIDGTLRIEHEIDDPERFVEAFRSGKLTKKS*
Ga0062382_100014715	3300004782	Wetland Sediment	MSKIVRYEFMGSRILFWLLSVSGVGIPLAILYLLNGTVRIEDDMDDPERFIAAFRSGGLKKG*
Ga0066388_1055271221	3300005332	Tropical Forest Soil	MSKIVRYEFMGNWLYFWLLWISVIETPLAILYLLNGMLRIENDVTDPEQFASEFRAGKR*
Ga0068705_100029369	3300005453	Anoxygenic And Chlorotrophic	MSKIVRYEFMGSWFRFWLMCLTIIGIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGKLTKKR*
Ga0070697_1016237222	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MQSGKLENMPKVVRYEFMGSWMLFWLLGISVIGIPLAILYLLNGTIRIEEELDHPEQFVADFRSGKLAGK*
Ga0070695_1003327652	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSKVVRYEFMGSWMLFWFLGISIIGIPLAILYLMNGTIRIEDELDDPEQFLAEFRSGKLAGK*
Ga0070761_102384791	3300005591	Soil	MSKIVRHEFMGSWIYFWLLCITVIGVPVAILYLLNGTLRIEDEVEDPEAFVSAFRAKKE*
Ga0070764_103040401	3300005712	Soil	MSKIVRNEFMGSWLLFSLLCLTVIGIPLAILYLLTGTIRIENEMEDPEKFIADLRAGNVGRSGN*
Ga0066905_1022988562	3300005713	Tropical Forest Soil	NWPLFWLLCISVLGLPIAVLYLVTGTIRVETEMTDPEGFVAAYRAGKRGKP*
Ga0066903_1016059961	3300005764	Tropical Forest Soil	MSKIVRYEFMGSWLYFWLLCISGIGIPVAILYLLNGTLRIEDEMTDPE
Ga0066903_1037834682	3300005764	Tropical Forest Soil	MSNIVRYEFMGSWLWFWLLCISGIGIPVAFLYVLTGTFRIETEMADPEEFVSTFRTGKR*
Ga0068707_100143011	3300005839	Anoxygenic And Chlorotrophic	MSKIIRYEFMGSWFRFWLMCLTIIGIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGKLTKKR*
Ga0068707_10984001	3300005839	Anoxygenic And Chlorotrophic	RYEFMGSWFRFWLMCLTIIAIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGKLTKKR*
Ga0070766_107469332	3300005921	Soil	MSKIVRNEFMGSWLLFSLLCLTVIGIPLAILYLLTGTIRIENDMEDPEKFIADLRAG
Ga0070765_1020679241	3300006176	Soil	MSKIVRNEFMGSWLLFSLLCLTIVGIPLALLYLLTGTIRIEEEIAEPEGFVAAFRARTIAKR*
Ga0079222_105186882	3300006755	Agricultural Soil	MSKVVRYEFMGSWMLFWLLGISIIGIPLAILYLMNGTIRIEDELDDPEQFLAEFRSGKLAGK*
Ga0079222_106704471	3300006755	Agricultural Soil	MAKIVRYEFMGSWMLFWLLGISILGIPLAILYLMNGTIRIEDKLDDPEQFVADFRSGKLAGK*
Ga0075425_1001885823	3300006854	Populus Rhizosphere	MSKVIRYEFMGSWMLFWLLGISIIGIPLAILYLMNGTIRIEDELDDPEQFLAEFRSGKLAGK*
Ga0075426_111510861	3300006903	Populus Rhizosphere	MPKVVRYEFMGSWMLFWLLGISVIGIPLAILYLLNGTIRIEEELDHPEQFVADFRSGKLAGK*
Ga0073932_100235820	3300007072	Hot Spring Sediment	VSRIIRYEFMGSWFRFWLMCLTVIGIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGKLAKTR*
Ga0073932_11632491	3300007072	Hot Spring Sediment	MSKIIRYEFMGSWFRFWLMCLTVIGIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGRLAKKR*
Ga0116129_10008925	3300009633	Peatland	MPKIVRYEFMGSWFIFWILCVTTIGIPIAILYLLNGTLRIEHELEDPEEFVSAFRDGKR*
Ga0116171_100048329	3300009692	Anaerobic Digestor Sludge	MSKIIRYEFMGSWFHFWVLSITVIGIPLALLYLLSGTLRIESEMDDPEHFVEQFRLRGRRSG*
Ga0116134_12764842	3300009764	Peatland	MSKIVRYEFMGSWLLFWLQCVTIIGIPLAILYVLNGTLRIEDETADPERFVSAFRAGKKG
Ga0117932_100271011	3300009945	Hot Spring Water Column	MSKIIRYEFMGSWFRFWLMCLTVIGIPFAVLYLIDGTLRMEHEIDDPERFVEAFRSGKLTKKS*
Ga0117932_11541962	3300009945	Hot Spring Water Column	MSRIIRYEFMGSWFRFWLMCLTVIGIPFAVLYLIDGTLRIEHEIDDPERFVEEFRSGRLTKKR*
Ga0129299_10190501	3300010289	Hot Spring Microbial Mat	MSKIIRYEFMGSWFRFWLMCLTVIGIPFAVLYLIDGTLRIEHEIDDPERFVEEFRSGKLTKKR*
Ga0129299_10285821	3300010289	Hot Spring Microbial Mat	MSKIIRYEFMGSWFRFWLMCLTVVGIPFALLYLINGTLRIEHEIDDPERFVEEFRSGKLTKKR*
Ga0126372_125184921	3300010360	Tropical Forest Soil	MSKIVRYEFMGSWLYFWLLCISGIGIPVAILYLLNGTLRIEDEMTDPEQFV
Ga0126379_137333971	3300010366	Tropical Forest Soil	MSNIVRYEFMGSWLWFWLLCISGIGIPVAVLYVLTGTFRIETEMADPEE
Ga0126381_1008071001	3300010376	Tropical Forest Soil	PVDGPAAGNGGSMMSKVVRYQFMGSWFLFWLLFVSGIGLPFALLYLLNTTIRLDSELTDPEEFMAAYRAGKLAKTRPTVLQKA*
Ga0126381_1024999791	3300010376	Tropical Forest Soil	MSKIVRYEFMGNWLYFWLLCISGIGIPVAILYLLNGTLRIEDEMTDPEQFVSAFRAGKR*
Ga0136449_10000289532	3300010379	Peatlands Soil	MSNIVRYEFMGSWLLFWLLCMTGIGIPFAVLYLLNGTLRIENEVADPEQFVSAFRAGRRK
Ga0136449_1001530042	3300010379	Peatlands Soil	MSKIIRNEFMGSWLLFSFLCITVIGIPLALLYLLSGTIRIETEMADPEQFVAAYRIGKMGKS*
Ga0136449_1026585322	3300010379	Peatlands Soil	MSKIIRNEFMGSWLLFSILCITVIGIPLALLYLLSGTIRIETEMEDPEQFVAAYRAGKLRKS*
Ga0136547_1027573	3300010381	Bioreactor	VRDHQGMSKLVRYEFMGSWLLFWALAITVIGIPLAILYLISGLLRIEHEMADPERFIAEFRARRG*
Ga0134124_121876511	3300010397	Terrestrial Soil	EFMGSWMLFWLLGISIIGIPLAILYLMNGTIRIEDELDDPEQFLAEFRSGKLAGK*
Ga0137392_109324482	3300011269	Vadose Zone Soil	MSKIVRYEFMGSWLWFWVLCVSIIGIPLAVLYLVNGTVRIEDELDEPELVLEKLRSGR*
Ga0137395_107271712	3300012917	Vadose Zone Soil	MSKIVRYEFMGSWLWFWLLCVSIIGIPLAVLYLVNGTVRIEDELDEPELVLEKLRSGR*
Ga0137410_105655732	3300012944	Vadose Zone Soil	MPKVVRYEFLGSWMLFWLLGISVIGIPLAILYLVNGTIRIEEELDYPEQFVADFRSGKLPGE*
Ga0126369_114609102	3300012971	Tropical Forest Soil	MSKIVRYEFMGSWLYFWLLCISGIGIPVAILYLLNGTLRIEDEMTDPEQFVSAFRAGRK*
Ga0164313_112514912	3300013101	Marine Sediment	IKEKEMGKIVRHEFMGNSIIFCILCLTGIGIPIAILYLINGTLRIETETEDPEEFVSQYRSGGSHR*
(restricted) Ga0172368_100072623	3300013123	Freshwater	MSKIIRYEFMGSWFYFWVLSITVIGIPLALLYLISGTLRIESAMDDPERFVEEFRLRNRRAG*
(restricted) Ga0172369_100378803	3300013125	Freshwater	RYEFMGSWFYFWVLSITVIGIPLALLYLISGTLRIESAMDDPERFVEEFRLRNRRAG*
Ga0157372_113043431	3300013307	Corn Rhizosphere	MSKVVRYEFMGSWMLLWFLGISIIGIPLAILYLMNGTIRIEDELDDPEQFLAEFRSGKLAGK*
Ga0181517_100404482	3300014160	Bog	MSKIIRHEFMGSWPLFWILCITGIGIPVALLYLLDGTIRIEDDMDNPEQFMADFRAGRLKKR*
Ga0181532_102666782	3300014164	Bog	MSRVVRNEFMGSWLLFSLLCLTVIGIPLAVLYLVTCTIRVETEMQDPEGFVAAWRAGKAGKR*
Ga0181528_106349421	3300014167	Bog	MSKIVRYEFMGSWPLFWLLCITGIGIPFAVLYLLNGTLRIDNEMADPEQFVSNFRAGKRI
Ga0181526_108145522	3300014200	Bog	MSNVIRNEFMGNWLLFSVLCLTVIGIPLALLYLLSGTIRIETQMEDPEQFVAAYRAGKLKRK*
Ga0182013_104360211	3300014492	Bog	MSKIIRNEFLGSWLLFTLLCLTVIGIPLALLYLLSGTIRIENEMEDPEQFVAALRAGKIAKR*
Ga0182041_117659121	3300016294	Soil	MSKIVRYEFMGSWLYFWLLCISGIGIPVAILYLLNGTLRIENELTDPEQVVSAFRAKKSGMW
Ga0182037_105624143	3300016404	Soil	MSKIVRYEFMGSWLYFWLLCISGIGIPVAILYLLNGTLRIEDEMTDPEQFVSAFRAGRR
Ga0182039_102397772	3300016422	Soil	MSKIVRYEFMGSWLYFWLHCISGIGIPVAILYLLNGTLRIEDEMTDPEQFVSAFRAGRK
Ga0181505_103062061	3300016750	Peatland	NEFMGSWLLFSLLCLTVIGIPLAVLYLVTCTIRVETEMQDPEGFVAAWRAGKAGKR
Ga0181505_107092022	3300016750	Peatland	MSKVIRNEFMGNWLLFSFLCITLIGIPLALLYLLTGTIRIETEMEDPEQFVVAYRTGRLRKG
Ga0187824_102055842	3300017927	Freshwater Sediment	MSKVVRYEFMGSWMLFWLLGISIIGIPLAILYLMNGTIRIEDEMDDPEQFLAEFRSGKLAGK
Ga0187819_106239491	3300017943	Freshwater Sediment	EFMGSWLFFWLLCITVVGIPVAILYLMNGTLRIEDEMADPEQFVSAFRARKRN
Ga0187879_100965712	3300017946	Peatland	MSRVVRNEFMGSWLLFSLLCLTVIGIPLAVLYLVTCTIRVETEMQDPEGFVAAWRAGKAGKR
Ga0187879_103439101	3300017946	Peatland	MSKVIRNEFMGNWLLFSVLCLTVIGIPLALLYLLSGTIRIETEMQDPEQFVAAYRAGKLKKS
Ga0181520_110621251	3300017988	Bog	RYEFMGSWALFWLLCITGIGMPFAVLYLLNGTLRIENEMADPEQFVSNFRAGKRI
Ga0187863_105726671	3300018034	Peatland	MSNVIRNEFMGNWLLFSVLCLTVIGIPLALLYLLSGTIRIETQMEDPEQFVAAYRAGKLKRK
Ga0187871_104691311	3300018042	Peatland	MSKLIRNQFMGSWFLFWLLSITIIGIPLAVLYLLEGTIRIETEMEDPETF
Ga0187890_102928622	3300018044	Peatland	MSRVVRNEFMGSWLLFSLLCLTVIGIPLAVLYLVTCTIRVETEMQDPEGFVA
Ga0190274_137360791	3300018476	Soil	MSKIVRYEFMGSWLYFWLMCITVIGLPIALLYILNGTIRIEEELKDPERFASEFRSGKLAGG
Ga0197142_10295372	3300020153	Sediment	MSKIIRYEFMGSWFRFWLMCLTIIGIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGKLAGKRR
Ga0214071_13643742	3300020812	Anaerobic Digester Digestate	MPKIVRYEFMGSWFYFWLLSITVIGIPLALLYLLSGTLRIGSAMEDPERFVEQFRLRQTS
Ga0210386_106194672	3300021406	Soil	MSKIVRHEFMGSWIYFWLLCITVIGIPVAILYLLNGTLRIEDEVEDPEAFVSAFRAKKG
Ga0210394_100121619	3300021420	Soil	MSKIIRYEFMGSWLRFWLLCITLVGIPFAVLYLLNGTLRIEDEMAEPEQFVSAYRAGKRN
Ga0210391_105663002	3300021433	Soil	MSKIVRNEFMGSWLLFSLLCLTIVGIPLALLYLLTGTIRIEEEIADPEGFVAAFRARTIGKR
Ga0187846_100819122	3300021476	Biofilm	MSKVVRYQFMGSWFWFWLLCISFVGIPFAILYLLNGTVRLESELSDPEEFLEAYRAGKLEKTRPTVLQKA
Ga0187846_103841582	3300021476	Biofilm	MSKVVRYQFMGSWFWFWLLCVSAVGIPFAILYLLNGTVRLESELSDPEEFLDAYRTGKIDKTRPVVLRKA
Ga0210402_102747722	3300021478	Soil	MSRIIRYEFMGSWLWFWLLCVSIIGIPLAVLYLVNGTVRIEDELDDPELVLEKLRSGR
Ga0126371_100630333	3300021560	Tropical Forest Soil	MSKIVRYEFMGSWLYFWLLCISGIGIPVAILYLLNGTLRIEDEMTDPEQFVSAFRAGRK
Ga0212092_10164384	3300022548	Hot Spring Microbial Mat	MSKIIRYEFMGSWFRFWLMCLTVIGIPFAVLYLIDGTLRIEHEIDDPERFVEEFRSGKLTKKR
Ga0212093_100440512	3300022554	Hot Spring Sediment	VSRIIRYEFMGSWFRFWLMCLTVIGIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGKLAKTR
Ga0236338_10134472	3300022593	Freshwater	MSKIIRHEFMGSRVLFWLLCITGIGLPLAVLYLVEGTIRIEDEMENPEQFAADFRAGRLRTK
Ga0224556_10941021	3300024295	Soil	MSKLVRYEFLGSWLLFWILCITGVGIPVAILYLLNGTLRIEDEMTDPEQFVSGFRAR
Ga0208193_100021816	3300025463	Peatland	MPKIVRYEFMGSWFIFWILCVTTIGIPIAILYLLNGTLRIEHELEDPEEFVSAFRDGKR
Ga0209099_10520022	3300025858	Anaerobic Digestor Sludge	MSKIIRYEFMGSWFHFWVLSITVIGIPLALLYLLSGTLRIESEMDDPEHFVEQFRLRGRRSG
Ga0209585_104830442	3300025891	Arctic Peat Soil	MSKIVRHEFLGNWLYFWLMCITGVLIPVALLYLLNGTVRVETEMDDPESCLQALRKGH
Ga0207699_112765331	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSKVVRYEFMGSWMLFWLLGISIIGIPLAILYLMNGTIRIEDELDDPEQFLAEFRSGKLAGK
Ga0207684_101273162	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSKVVRYEFMGSWMLFWLLGISIIGIPLAILYLMNGTIRIEDELDDPEQFLADFRSGKLAGK
Ga0207665_106396152	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPKVVRYEFMGSWMLFWLLGISVIGIPLAILYLLNGTVRIEEELDHPEQFVADFRSGKLAGK
Ga0209018_100269210	3300026278	Anoxygenic And Chlorotrophic Microbial Mat	VPKIIRYEFMGSWFRFWVLCLTVVGIPFAILYLINGTLRIEHELEDPESFVEQYRSGKLRRK
Ga0209018_10088794	3300026278	Anoxygenic And Chlorotrophic Microbial Mat	MSKIVRYEFMGSWFRFWLMCLTIIAIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGKLTKKR
Ga0209018_10089384	3300026278	Anoxygenic And Chlorotrophic Microbial Mat	MSKIIRYEFMGSWFRFWLMCLTIIGIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGKLTKKR
Ga0209809_10817332	3300026509	Anoxygenic And Chlorotrophic	MSKIVRYEFMGSWFRFWLMCLTIIGIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGKLTKKR
Ga0209648_1000009835	3300026551	Grasslands Soil	MSKIVRYEFMGSWLRFWLLCISIIGIPLAVLYLVNGTVRIEDELDEPELVLEKLRNRR
Ga0209008_11447222	3300027545	Forest Soil	MSKIIRYEFMGSWLFFWLLCITVIGIPVAILYLLN
Ga0209073_101021561	3300027765	Agricultural Soil	MATISRYEFMGSWLYFWLFCITGVGIPLAVLYLLNGTVRVETQV
Ga0209073_104139632	3300027765	Agricultural Soil	MSKVVRYEFMGSWMLFWLLGISIIGIPLAILYLMNGTIRIEDELDDPEQFLAEFRSGKLA
Ga0209683_100074035	3300027840	Wetland Sediment	MSKIVRYEFMGSRILFWLLSVSGVGIPLAILYLLNGTVRIEDDMDDPERFIAAFRSGGLKKG
Ga0209517_100619631	3300027854	Peatlands Soil	MSNIVRYEFMGSWLLFWLLCMTGIGIPFAVLYLLNGTLRIEN
Ga0209166_100466153	3300027857	Surface Soil	MGSWMLFWLLGISVIGIPLAILYLLNGTIRIEEELDHREQFVADFRSGKLPGK
Ga0209169_105836401	3300027879	Soil	MSKIVRNEFMGSWLLFSLLCLTVIGIPLAILYLLTGTIRIENEMEDPEKFIADLRAGNVGRSGN
Ga0137415_112442772	3300028536	Vadose Zone Soil	MSKIVRYEFMGSWLWFWLLCVSIIGIPLAVLYLVNGTVRIEDELDEPELVLEKLRSGR
Ga0272446_100295517	3300028735	Microbial Mat	MSKIIRYEFMGSWFRFWLMCLTVIGIPFAVLYLIDGTLRIEHEIDDPERFVEAFRSGKLTKKS
Ga0272446_10673952	3300028735	Microbial Mat	MGKIIRYEFLGNWLVFWGLSISVIGIPLALLYLLSGTVRIEHEMDDPERFVAQFRAGGLKGK
Ga0308309_114913421	3300028906	Soil	MSKIVRNEFMGSWLLFSLLCLTIVGIPLALLYLLTGTIRIEEEIAEPEGFVAAFRARTIAKR
Ga0243510_10005133	3300029397	Anode Biofilm	MPKIVRWEFLGSWLLFWVLCITVIGIPLAILYLLNGTVRIEHEVSDPERFVTEFRSGRLTRK
Ga0310686_1014463926	3300031708	Soil	MSKIIRYEFMGNWLLFWVLCITGIGIPFAILYLLNGTLRIEDEMADPEQFVSAFRAGKRN
Ga0310686_1121433993	3300031708	Soil	MSKIVRYEFMGSWLLFWLQCVTIIGIPLAILYLLNGTLRIEDETADPENFVSAFRAGKRS
Ga0302319_111429542	3300031788	Bog	MIGYVSMSKLVRYEFLGSWLLFWILCITGVGIPVAILYLLNGTLRIEDEMTDPEQFVSGFRARKRN
Ga0308411_102283592	3300031812	Hot Spring Phototrophic Mat	MPKIIRYEFMGSWFRFWLMCLTVVGIPFALLYLINGTLRIEHEIDDPERFVEEFRSGKLTKKR
Ga0308405_100206611	3300031875	Hot Spring Phototrophic Mat	MSKIVRYEFMGSWFRFWLMCLTIIGIPFAVLYLIDGTLRIEHDIDDPERLVEEFRSGKLTKKR
Ga0310912_102961911	3300031941	Soil	IVRYEFMGSWLYFWLLCISGIGIPVAILYLLNGTLRIEDEMTDPEQFVSAFRAGRK
Ga0308420_11346621	3300031966	Hot Spring Phototrophic Mat	RFWLMCLTIIGIPFAVLYLIDGTLRIEHDIDDPERFVEEFRSGKLTKKR
Ga0318533_104245053	3300032059	Soil	MSKIVRYEFMGSWLYFWLLCISGIGIPVAILYLLNGTLRIE
Ga0318533_105408491	3300032059	Soil	MSKIVRYEFMGNWLFFALLCITVIGIPVAILYLLNGTLHIETEL
Ga0311301_101471191	3300032160	Peatlands Soil	NIVRYEFMGSWLLFWLLCMTGIGIPFAVLYLLNGTLRIENEVADPEQFVSAFRAGRRK
Ga0311301_110676941	3300032160	Peatlands Soil	MSKIIRNEFMGSWLLFSFLCITVIGIPLALLYLLSGTIRIETEMADPEQFVAAYRIGKMGKS
Ga0307470_100049726	3300032174	Hardwood Forest Soil	MSKVVRYQFMGSWFWFWLLCVSAVGIPFAILYLLNGTVRLESELSDPEEFLEAYRTGKLAKSRPTVLQKA
Ga0315287_115274822	3300032397	Sediment	MSKIVRYEFMGSWFFFWLLSITVIGIPLALLYLLSGTLRIESGMEDPERFVEQFRLRG
Ga0335085_110705181	3300032770	Soil	MSKLIRFEFLGSWLLFWLFAITVIGIPLAILYLLSGTVVLSQPMDDPERFVSEFRSGRLNRR
Ga0335069_108231752	3300032893	Soil	MSKIVRYDFMGSWIYFWLLCITGIGIPFALLYLLNGTIQTHTEVSDPERFVQEFRAGKMGAA
Ga0335069_125690391	3300032893	Soil	MPKLIRFEFLGSWLLFWLFSITVIGVPLAILYLLSGTVVLSEPMEDPERFVSEFRAGRLRRG
Ga0316625_1020846902	3300033418	Soil	MSKIVRYEFMGNWFLFWVLSITVIGIPVALLYLISGTLRIESAMDDPEKFVERFRAGQVKPLTSA
Ga0316626_118546191	3300033485	Soil	MSRIVRHEFMGSWLMFWLLAISIIGLPLAVLYLIDGTVRIESDVEDAEAFVSAFRAGKK
Ga0371488_0205312_382_564	3300033983	Peat Soil	MSKIVRYEFMGSWLLFWLLCISGIGIPFAVLYLLNGTLRIEGEMADPEQFISAFRAGKRN
Ga0373895_065213_44_253	3300034075	Sediment Slurry	MEVRMSKIVRYEFMGNWFLFWVLSITVIGIPVALLYLISGTLRIESAMDDPEKFVERFRAGQVKAGPAA
Ga0373912_0245430_120_317	3300034088	Sediment Slurry	MSKIVRYEFMGNWFLFWVLSITVIGIPVALLYLISGTLRIESAMDDPEKFVERFRAGQVKAGPAA
Ga0370480_0117903_539_715	3300034169	Untreated Peat Soil	MSKIVRYEFLGSWLYFWLMCVTGLLIPVALLYLLNGTVRVDTEMDDPESCLEALRQRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters