| Basic Information | |
|---|---|
| IMG/M Taxon OID | 3300033989 Open in IMG/M |
| GOLD Reference (Study | Sequencing Project | Analysis Project) | Gs0136120 | Gp0356240 | Ga0334924 |
| Sample Name | Biocrust microbial communities from Mojave Desert, California, United States - 20HNC |
| Sequencing Status | Permanent Draft |
| Sequencing Center | DOE Joint Genome Institute (JGI) |
| Published? | N |
| Use Policy | Open |
| Dataset Contents | |
|---|---|
| Total Genome Size | 129159367 |
| Sequencing Scaffolds | 76 |
| Novel Protein Genes | 84 |
| Associated Families | 75 |
| Dataset Phylogeny | |
|---|---|
| Taxonomy Groups | Number of Scaffolds |
| All Organisms → cellular organisms → Bacteria | 4 |
| All Organisms → cellular organisms → Bacteria → Acidobacteria | 3 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans | 2 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → Oscillatoria nigro-viridis | 1 |
| All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Haemosporida → Plasmodiidae → Plasmodium | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp. | 1 |
| Not Available | 22 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 6 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium | 6 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae | 6 |
| All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. | 3 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Aphanothecaceae → Crocosphaera → Crocosphaera chwakensis | 2 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → environmental samples → uncultured Microcoleus sp. | 2 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium | 6 |
| All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → unclassified Saccharibacteria → Candidatus Saccharibacteria bacterium | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group | 3 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Tychonema → unclassified Tychonema → Tychonema sp. LEGE 06208 | 1 |
| All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → environmental samples → uncultured Ramlibacter sp. | 1 |
| All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1 |
| All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 1 |
| Ecosystem Assignment (GOLD) | |
|---|---|
| Name | Soil And Biocrust Microbial Communities From Mojave Desert, California, United States |
| Type | Environmental |
| Taxonomy | Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust → Soil And Biocrust Microbial Communities From Mojave Desert, California, United States |
| Alternative Ecosystem Assignments | |
|---|---|
| Environment Ontology (ENVO) | desert biome → desert → soil biocrust |
| Earth Microbiome Project Ontology (EMPO) | Unclassified |
| Location Information | ||||||||
|---|---|---|---|---|---|---|---|---|
| Location | USA: California | |||||||
| Coordinates | Lat. (o) | 34.7856 | Long. (o) | -115.66 | Alt. (m) | N/A | Depth (m) | N/A | Location on Map |
| Zoom: | Powered by OpenStreetMap © | |||||||
| Family | Category | Number of Sequences | 3D Structure? |
|---|---|---|---|
| F000265 | Metagenome / Metatranscriptome | 1420 | Y |
| F001042 | Metagenome / Metatranscriptome | 794 | Y |
| F001519 | Metagenome / Metatranscriptome | 679 | Y |
| F001926 | Metagenome / Metatranscriptome | 616 | Y |
| F002921 | Metagenome | 520 | Y |
| F003047 | Metagenome | 510 | Y |
| F004047 | Metagenome / Metatranscriptome | 455 | Y |
| F004218 | Metagenome / Metatranscriptome | 448 | Y |
| F005661 | Metagenome / Metatranscriptome | 393 | Y |
| F005774 | Metagenome / Metatranscriptome | 390 | Y |
| F006886 | Metagenome / Metatranscriptome | 362 | Y |
| F007252 | Metagenome / Metatranscriptome | 354 | Y |
| F008025 | Metagenome / Metatranscriptome | 340 | Y |
| F009290 | Metagenome / Metatranscriptome | 320 | Y |
| F009555 | Metagenome / Metatranscriptome | 316 | Y |
| F009736 | Metagenome / Metatranscriptome | 313 | Y |
| F009855 | Metagenome | 312 | Y |
| F009946 | Metagenome / Metatranscriptome | 310 | Y |
| F010813 | Metagenome / Metatranscriptome | 298 | Y |
| F012324 | Metagenome | 281 | Y |
| F012744 | Metagenome / Metatranscriptome | 277 | Y |
| F014784 | Metagenome / Metatranscriptome | 260 | Y |
| F014785 | Metagenome / Metatranscriptome | 260 | Y |
| F016792 | Metagenome / Metatranscriptome | 244 | Y |
| F017778 | Metagenome / Metatranscriptome | 238 | Y |
| F018678 | Metagenome / Metatranscriptome | 233 | Y |
| F022144 | Metagenome / Metatranscriptome | 215 | Y |
| F022153 | Metagenome | 215 | Y |
| F022748 | Metagenome / Metatranscriptome | 213 | Y |
| F028302 | Metagenome / Metatranscriptome | 192 | Y |
| F029331 | Metagenome / Metatranscriptome | 188 | Y |
| F030871 | Metagenome / Metatranscriptome | 184 | Y |
| F034817 | Metagenome | 173 | Y |
| F037412 | Metagenome / Metatranscriptome | 168 | Y |
| F037654 | Metagenome | 167 | Y |
| F042091 | Metagenome / Metatranscriptome | 159 | N |
| F043687 | Metagenome / Metatranscriptome | 156 | Y |
| F044877 | Metagenome / Metatranscriptome | 153 | N |
| F046866 | Metagenome | 150 | Y |
| F048771 | Metagenome / Metatranscriptome | 147 | Y |
| F050148 | Metagenome / Metatranscriptome | 145 | Y |
| F051625 | Metagenome / Metatranscriptome | 143 | Y |
| F051700 | Metagenome / Metatranscriptome | 143 | Y |
| F052381 | Metagenome / Metatranscriptome | 142 | Y |
| F052853 | Metagenome | 142 | Y |
| F055944 | Metagenome | 138 | Y |
| F056372 | Metagenome | 137 | Y |
| F057109 | Metagenome / Metatranscriptome | 136 | Y |
| F058553 | Metagenome / Metatranscriptome | 135 | Y |
| F060104 | Metagenome / Metatranscriptome | 133 | N |
| F062389 | Metagenome / Metatranscriptome | 130 | N |
| F062444 | Metagenome | 130 | Y |
| F062667 | Metagenome / Metatranscriptome | 130 | Y |
| F063357 | Metagenome | 129 | Y |
| F063432 | Metagenome | 129 | Y |
| F064527 | Metagenome / Metatranscriptome | 128 | Y |
| F067090 | Metagenome / Metatranscriptome | 126 | Y |
| F068444 | Metagenome / Metatranscriptome | 124 | Y |
| F069696 | Metagenome / Metatranscriptome | 123 | Y |
| F070770 | Metagenome | 122 | N |
| F071620 | Metagenome / Metatranscriptome | 122 | Y |
| F073081 | Metagenome | 120 | Y |
| F075779 | Metagenome / Metatranscriptome | 118 | Y |
| F078146 | Metagenome / Metatranscriptome | 116 | N |
| F079368 | Metagenome / Metatranscriptome | 116 | Y |
| F080891 | Metagenome / Metatranscriptome | 114 | Y |
| F085140 | Metagenome / Metatranscriptome | 111 | Y |
| F086616 | Metagenome / Metatranscriptome | 110 | N |
| F091337 | Metagenome | 107 | Y |
| F093265 | Metagenome / Metatranscriptome | 106 | Y |
| F096282 | Metagenome / Metatranscriptome | 105 | Y |
| F097687 | Metagenome / Metatranscriptome | 104 | Y |
| F102648 | Metagenome | 101 | Y |
| F103846 | Metagenome | 101 | Y |
| F104098 | Metagenome / Metatranscriptome | 101 | Y |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| Ga0334924_000279 | All Organisms → cellular organisms → Bacteria | 3439 | Open in IMG/M |
| Ga0334924_000370 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 3201 | Open in IMG/M |
| Ga0334924_000828 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans | 2553 | Open in IMG/M |
| Ga0334924_001890 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Oscillatoriaceae → Oscillatoria → Oscillatoria nigro-viridis | 2018 | Open in IMG/M |
| Ga0334924_003035 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Apicomplexa → Aconoidasida → Haemosporida → Plasmodiidae → Plasmodium | 1749 | Open in IMG/M |
| Ga0334924_003331 | All Organisms → cellular organisms → Bacteria | 1694 | Open in IMG/M |
| Ga0334924_005012 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1471 | Open in IMG/M |
| Ga0334924_005146 | All Organisms → cellular organisms → Bacteria | 1457 | Open in IMG/M |
| Ga0334924_005308 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Pseudanabaenales → Leptolyngbyaceae → Leptolyngbya → environmental samples → uncultured Leptolyngbya sp. | 1442 | Open in IMG/M |
| Ga0334924_005617 | Not Available | 1411 | Open in IMG/M |
| Ga0334924_006546 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1329 | Open in IMG/M |
| Ga0334924_007086 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium | 1290 | Open in IMG/M |
| Ga0334924_007090 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae | 1289 | Open in IMG/M |
| Ga0334924_008625 | Not Available | 1195 | Open in IMG/M |
| Ga0334924_009154 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 1168 | Open in IMG/M |
| Ga0334924_009301 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. | 1161 | Open in IMG/M |
| Ga0334924_009414 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium | 1155 | Open in IMG/M |
| Ga0334924_009958 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium | 1128 | Open in IMG/M |
| Ga0334924_012173 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1037 | Open in IMG/M |
| Ga0334924_012609 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria | 1023 | Open in IMG/M |
| Ga0334924_013626 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 989 | Open in IMG/M |
| Ga0334924_014164 | All Organisms → cellular organisms → Bacteria | 973 | Open in IMG/M |
| Ga0334924_014414 | Not Available | 965 | Open in IMG/M |
| Ga0334924_014727 | Not Available | 956 | Open in IMG/M |
| Ga0334924_015245 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Aphanothecaceae → Crocosphaera → Crocosphaera chwakensis | 941 | Open in IMG/M |
| Ga0334924_015363 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae | 937 | Open in IMG/M |
| Ga0334924_016772 | Not Available | 902 | Open in IMG/M |
| Ga0334924_017035 | Not Available | 896 | Open in IMG/M |
| Ga0334924_018683 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → environmental samples → uncultured Microcoleus sp. | 861 | Open in IMG/M |
| Ga0334924_019370 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Microcoleus → environmental samples → uncultured Microcoleus sp. | 847 | Open in IMG/M |
| Ga0334924_020424 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae | 826 | Open in IMG/M |
| Ga0334924_020931 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Aphanothecaceae → Crocosphaera → Crocosphaera chwakensis | 817 | Open in IMG/M |
| Ga0334924_021009 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium | 816 | Open in IMG/M |
| Ga0334924_023017 | Not Available | 782 | Open in IMG/M |
| Ga0334924_024126 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae | 765 | Open in IMG/M |
| Ga0334924_025044 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium | 750 | Open in IMG/M |
| Ga0334924_025623 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium | 742 | Open in IMG/M |
| Ga0334924_027453 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 719 | Open in IMG/M |
| Ga0334924_027791 | Not Available | 715 | Open in IMG/M |
| Ga0334924_028834 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 702 | Open in IMG/M |
| Ga0334924_029046 | Not Available | 700 | Open in IMG/M |
| Ga0334924_029190 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium | 698 | Open in IMG/M |
| Ga0334924_030244 | Not Available | 687 | Open in IMG/M |
| Ga0334924_031405 | All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Saccharibacteria → unclassified Saccharibacteria → Candidatus Saccharibacteria bacterium | 675 | Open in IMG/M |
| Ga0334924_031608 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 673 | Open in IMG/M |
| Ga0334924_031722 | Not Available | 671 | Open in IMG/M |
| Ga0334924_031862 | Not Available | 670 | Open in IMG/M |
| Ga0334924_036295 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium | 629 | Open in IMG/M |
| Ga0334924_036654 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 627 | Open in IMG/M |
| Ga0334924_037273 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium | 622 | Open in IMG/M |
| Ga0334924_037723 | Not Available | 618 | Open in IMG/M |
| Ga0334924_038616 | Not Available | 611 | Open in IMG/M |
| Ga0334924_039764 | Not Available | 603 | Open in IMG/M |
| Ga0334924_040077 | Not Available | 601 | Open in IMG/M |
| Ga0334924_042655 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae | 583 | Open in IMG/M |
| Ga0334924_042662 | Not Available | 583 | Open in IMG/M |
| Ga0334924_043254 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Microcoleaceae → Tychonema → unclassified Tychonema → Tychonema sp. LEGE 06208 | 579 | Open in IMG/M |
| Ga0334924_043395 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium | 579 | Open in IMG/M |
| Ga0334924_044193 | Not Available | 574 | Open in IMG/M |
| Ga0334924_044597 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria | 571 | Open in IMG/M |
| Ga0334924_044659 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → environmental samples → uncultured Ramlibacter sp. | 571 | Open in IMG/M |
| Ga0334924_045518 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium | 565 | Open in IMG/M |
| Ga0334924_046104 | All Organisms → cellular organisms → Bacteria → Terrabacteria group | 562 | Open in IMG/M |
| Ga0334924_046166 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium | 562 | Open in IMG/M |
| Ga0334924_047559 | Not Available | 554 | Open in IMG/M |
| Ga0334924_048005 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. | 552 | Open in IMG/M |
| Ga0334924_048106 | All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → unclassified Nitrososphaera → Nitrososphaera sp. | 551 | Open in IMG/M |
| Ga0334924_048783 | Not Available | 547 | Open in IMG/M |
| Ga0334924_048908 | Not Available | 547 | Open in IMG/M |
| Ga0334924_049992 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium | 541 | Open in IMG/M |
| Ga0334924_051847 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae | 532 | Open in IMG/M |
| Ga0334924_052195 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 530 | Open in IMG/M |
| Ga0334924_052712 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium | 528 | Open in IMG/M |
| Ga0334924_055523 | Not Available | 515 | Open in IMG/M |
| Ga0334924_057425 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans | 507 | Open in IMG/M |
| Ga0334924_058835 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium | 501 | Open in IMG/M |
| Scaffold ID | Protein ID | Family | Sequence |
|---|---|---|---|
| Ga0334924_000279 | Ga0334924_000279_2079_2456 | F022144 | MTANEPPQPPYVLLFEEAAPGAVPLLVSVDDRGALPLFDSAEKAQDFVDSTDFGPDWKPVEVSGAGLLAVLETCRGQVEYVALNPPPAREGGGMQVEMGALEELIEAYGASREDDLFGLGGFGQN |
| Ga0334924_000370 | Ga0334924_000370_574_759 | F037412 | MSKDFKCEVCRKPAASLHMRDVDGKWVCAYCIPEKELDACPGLRERLGLQPRASAQRKKA |
| Ga0334924_000828 | Ga0334924_000828_2395_2553 | F051625 | NTGNAQNQLDLIQYGSEADDFEFDEVGSTITTSPANTATCDQQVNQAASAAA |
| Ga0334924_001890 | Ga0334924_001890_243_824 | F005661 | MVHDAARTAKILDLQKQLRTAYNRHDAKIRANKVELERLTLEAIEGGLTDKAQIDKYVSKAIVAGAKHDQHIVNLSQQLQNELNLVKVQGASTQTLANADFRQRLLLIKANHQAKGQIQTNGFQQSLKAIQASPQQAIAMQAKRAAFTNYINAKDFDPIPAVSGASTGGNNSSVGNNSKGFLDGLFDFFSGRK |
| Ga0334924_003035 | Ga0334924_003035_1167_1391 | F001926 | VRHEDIPEINNPKIRFPVLEGDKLMKEVLNGGYNVHPIPPPNSEIKERIRKRYERERIKIEKLLTLGYTTSGDP |
| Ga0334924_003331 | Ga0334924_003331_839_1054 | F060104 | VIRLVAPLTVTFGVLTLVAALAMSMIAVPLAMATMVAGFCWSVERPGRGVPCSWCQAGCVECRERIELGAH |
| Ga0334924_005012 | Ga0334924_005012_415_1179 | F014784 | MNSLLEESSQRMREFFELASDAPLVAPEMAAKLELRPETAGGLAHFNIEWHVIPSASSVPLDNAYMARLYPLAPRDFRKEHEHGPSYRAQLITGHERHQGRIIGVETTAKPRYLPGNRQSYGTLYGHDASADPFAPYMGQAGMMNGTRYNHNYLSLRTFLGVVNDDWRARRLLPAGYRATVCPPAVFNLVGTIFHPEWSETETLELGFYRDPAGNATCYMVGSNAPNDFSYIDEIEGEGDWSLAGFRLALVPED |
| Ga0334924_005146 | Ga0334924_005146_945_1112 | F056372 | VIGQLKDFFSLERHRAKTLGGLLTRLAAKVAAYTCAQRINDSLGRPLRHLADLLV |
| Ga0334924_005308 | Ga0334924_005308_803_1441 | F005661 | MQFRVAQTSGAAHVAREFDYHSGPLTPELVNEAARKAKILDLQKQLRTAYNRHDAKIRSNKVELERLTLEAIEGGLTDKAQIDKYVGKAIVAGAKHDQHIVDLSQQLQHELSLVKVQGASTQTLANTGFRQRLLLIKASHTAKGQIQHNGFQQSLKAIQASPQQAIAMQQKRANFNAYINAKDFDPIPTVSGVSAGGNSSGMGNNSKSFLGSL |
| Ga0334924_005617 | Ga0334924_005617_3_194 | F104098 | LVQPGYKEEEDVSTPRSDAQAIEMLSGHPDSDRFIEEYRRLSARHPDTVEALTLTGETFYLEHR |
| Ga0334924_005617 | Ga0334924_005617_335_601 | F070770 | MAKKRAGGKSAPEAWIGRDVVIGVGASGARVSGELREVSDRGVVLHYGAEQHGRDPGHVFYPWSNGQAIQLPDEEQPADEEQPSGSGE |
| Ga0334924_005672 | Ga0334924_005672_565_747 | F103846 | VNSGGGYSLRAYPEGVEDPGKDLLAVGVVRADGIVALNPERPPAVAGEQGVAHSERSTKV |
| Ga0334924_006546 | Ga0334924_006546_996_1184 | F069696 | MRESYEPKDLSCDRQELLSRLRDPKPEDATLPAEAEGYLRHHPDDAEVREAREGLPELDQSE |
| Ga0334924_007086 | Ga0334924_007086_892_1065 | F034817 | MQRSAEQIVLICDKCREKLILLGFEEEWRSRHAIFQCECGQRLTLDGRADEEVPAAS |
| Ga0334924_007090 | Ga0334924_007090_2_241 | F048771 | TIQAIVEDRYGSLLSRYDIDVYLDGQPMRFDYGESSGRLTCPTGGLSSGTHAVEIEAFIESNYGSRRARKRWTFTVARR |
| Ga0334924_008625 | Ga0334924_008625_79_255 | F063357 | MLGDLLDHMEGAREVASGIVHEYPEYEAMAEEVRKATEMVAMACEVEAYGSREEDEQK |
| Ga0334924_008860 | Ga0334924_008860_98_307 | F073081 | MWGLSKSERRRHGAEMLYGLETGFREDGWPSEEFVYDAERDLYRFPDGEFAFFREYANERRLREMGIIG |
| Ga0334924_009154 | Ga0334924_009154_419_679 | F091337 | MASPTSGTTENPEVPRAKGGSYSKGTPAAAMDDIDATHSDERPSQGQWLSEAPPTGVLTGVLGEMSFYYGACWLHYRSAQRRDKTQ |
| Ga0334924_009301 | Ga0334924_009301_259_1041 | F012744 | MPHTDDCPAGRSQHLTRGVFFKNHVAKVYVFDRIKHGTALDILSRASAACRFESPDTAVSEHQWREYFGLPVMSLSAAANYYGLNVSELEHHIRRKITYAGGLFESGMLVLRGAALESAREMGHTAGIQQGFVLLPPRAVLNLCLYLRPVPAVAATVNAFWDYVVAQKLHESTSADWYYTSSQHVEIECDRIEEQRLLECLAEAKERKLYPYIQHFGRQTCFEAWARLFSYEGEFPPPRGSFYVERQDWFDRVSHISLWR |
| Ga0334924_009414 | Ga0334924_009414_108_371 | F037654 | MAASEFQLTLMSYLSEQGMSVAGLARQTGYSPVLLENLIAGKTRQMPVDFFVRVADALHMTMEEKDALVRSWAFGIENSSWSLTNSA |
| Ga0334924_009958 | Ga0334924_009958_683_1000 | F093265 | VSLLSLVGADGTALIEEKQMADKDRVDRELADAGWVPDGTFSEHLAIGESDDLCVLVHRSTWETDEPTYELYDAGRHISYWVHEIPTPDLAAKLLEEYGEPSEEE |
| Ga0334924_012173 | Ga0334924_012173_577_864 | F000265 | VREISLTHFNLTANPRSSMPELRGLQATPETKAEWTYAYQLFLEAPGVAYDEKKDRTSRIEYVAKKLNLTHKQAKRRIRNYEAWQRNIKKGLVTP |
| Ga0334924_012609 | Ga0334924_012609_484_717 | F058553 | MAQTRAVLPARFVPLADELLATTGASDYSTLIGILLSRYGKHLLNTWEIANCPQASVQQPIASVSITQPETFTPMEF |
| Ga0334924_013626 | Ga0334924_013626_364_798 | F003047 | MWTNTTSARVPVIYPESSENICRIGHTDTGREEEFMTGDALVEEINAAYVRLETATEELARADHKLAEHVSRVRLDNAEAILEARNERTASLYLDGMLDTEEHHRLQAGRTRAQLDLQHARHEVERLHLIVRLLGTQTGERTQD |
| Ga0334924_013626 | Ga0334924_013626_77_373 | F028302 | LSTSIERKEPTVADVHVYVNRTAAKEGTTLEDIEEALRNLDYVSDVDVNAPGNVIAVSFEGGKAEQEEIKDTVEGAGYEVSRLSVRSAISEERNLWDI |
| Ga0334924_014164 | Ga0334924_014164_328_531 | F064527 | MSPSAPADRIRTLLLRADNVLKNEGDEGDRRRRAIKALEEAREVARDPGVEPRVRELVERRLEGLGA |
| Ga0334924_014414 | Ga0334924_014414_371_598 | F096282 | MRFEHRGWIIELFLVGIHHPNYPYQIWEEARAIWKVVIDGRENSGTRTGDREKVLADIKAFIDWRIDDPDMKNIF |
| Ga0334924_014727 | Ga0334924_014727_1_120 | F079368 | HKARPAPVDVGELARYDRPVPGVADYDTLLLSGPCAGRA |
| Ga0334924_015245 | Ga0334924_015245_68_412 | F007252 | MKKSKGKSKCGRGGARPGAGGGCRWKHGKTKLVRLPVALVDKILEVARYMDQNEGRLPPSGSAVIMSGHPCQSLSPEEQKEFWAKEKARKLAEMVICGDERVWVSDTTFKELPD |
| Ga0334924_015363 | Ga0334924_015363_750_935 | F085140 | MRKLLGGLLLLGAAAGAVYALRNYLQDSTGAKRGDVQIILDTGSTVEPDAAEAQEFVDVARN |
| Ga0334924_016772 | Ga0334924_016772_285_572 | F068444 | LGKGKFFPEALGDRRRACMVVQQAPRRRVTPEGHNDLLDVWREQVDQARRGQEASWSLAQGLAQESVEAYQDFLESVFFYYGENARAAEKGTREG |
| Ga0334924_017035 | Ga0334924_017035_238_423 | F050148 | VDWDDGDAERQHRDPDIATEERRTLARHHLAVRLGIDPRLAEYLLELHERIEKLEDRPGS |
| Ga0334924_018683 | Ga0334924_018683_141_599 | F017778 | MAKGKTKGKRGGTRPGAGNPYKWKHRETKPVRLPIVLIPKILEIAQLIDGQEYIDRVEHEFDDEEGKPEYYNGYYAAELSYLRCGNDALASEVKNLRKENEALKAQLMELNNGVLPEPKPDFSSLLLVREPKPLAKQDRRKKRKAIFVEKQV |
| Ga0334924_019370 | Ga0334924_019370_1_324 | F078146 | MEFEFLDRMGYQINISWIVLPEGTREKQGQVIQAYYVRAFEPKLNIHQNTFAAVQAEESKKRIENLEQCKYDSLKKQVENWEQSGDDKDTIIKKIWEAGRDRLMVNI |
| Ga0334924_020424 | Ga0334924_020424_360_548 | F014785 | MAKLYCPCGQAEDLWGEFWWVGGRYRWLFFDYDRRSETFGEQVENCPACGRLLERKNLSAPS |
| Ga0334924_020931 | Ga0334924_020931_274_714 | F007252 | MNNKVHPFFEDVTLWDFNMKKSKGKSKCGRGGARPGAGGVCRWKHGRTKLVRLPVALLDEILEVARYMDQNEGRLPPCAPPVITSRHLSESLSGEELKEFLAKKKVRKLAEKVMCGDERVLVSDKTFAAFDIFEVPPPQKARSSNR |
| Ga0334924_021009 | Ga0334924_021009_1_381 | F016792 | RSDPTCEAPGTTATIWEHQSGGGPAEDGWLNASERPWLRSVIQNRPKVLTGRRQNGTRVGSPIGTLGDGGNMTRRTIGRSLPIRFSPLDNRVSPIRPVAARRRYPDRKGGDGGGGRGTAEQAKAVL |
| Ga0334924_023017 | Ga0334924_023017_259_537 | F051700 | MDSKMPHMTDPQDRRLKRIAREKGLTCPDCGSSEPVPREGGEPKDLPEGGLEVPVRCEACEGASEMALVLSPEEAQALGFHSLGGRPGKHGT |
| Ga0334924_024126 | Ga0334924_024126_130_345 | F048771 | MDGSYLSRHDIDVYLDGQPMRFSYGRSSGRLTGSTGSLSSGNHTVEIEVYTEDDAGNSKTGRKRWTFKIKK |
| Ga0334924_024713 | Ga0334924_024713_423_587 | F073081 | MLYELETGFREEGWPSDDFVYDAEHDLYRFADGEFAFSREYANERRLREMGIFG |
| Ga0334924_025044 | Ga0334924_025044_3_344 | F052853 | MQGLSLNLPTGYYMERDADVLVLRRLDGSMVVAFSVRGATPEAVRRMVEETIREGRSAYLQEPPAHEPSLQVRFFGHFEMSCEGDAIPLGRNGKALTILKYLLANRRRPVSQDH |
| Ga0334924_025623 | Ga0334924_025623_182_643 | F080891 | VRFTKHEPPSGSRFYEERWKRAGTRGAEGQEALSVVENLNGDWKVERLSGPVPMPFVWKRIRAGRGTTRISPPPRRRRGLPLQPKLPFRLEQREGHVALIYLGPLSFLVDELRLEEDGSWLGRANAAGIRYAWFRMLPFVGITNPASRIRNLG |
| Ga0334924_027453 | Ga0334924_027453_214_408 | F005774 | MDRDRLLRDLRWLAEGNPRYAGTDEEGKQNPAVAELMATDLLLGYIGDEAVTDVFNEIRGGHSP |
| Ga0334924_027791 | Ga0334924_027791_54_302 | F062667 | VTWKIIEIETAAPGWRTRGGPHEDGAPIALWALVENDAGERLVVGLDPTTEDGPGGRLIDVDRLVGRVADVDDGYTYRAPIS |
| Ga0334924_028834 | Ga0334924_028834_388_534 | F055944 | MARQLLVLLLAFAVGTAVAGALGAGLGTAFGIGQMFFVFALVYVLLRD |
| Ga0334924_029046 | Ga0334924_029046_145_360 | F029331 | MRSTQYQPAPGRTAQILRESTIVCRAIARHQREVALQGRTQEAREMEALSSGVYSMILGFTRGEHELSNAA |
| Ga0334924_029190 | Ga0334924_029190_112_282 | F057109 | MVENPDHDREEVPGRPAVSSENMQKQAQEGMEQRAEEGRGGTATRVRLFIRRLFGR |
| Ga0334924_030244 | Ga0334924_030244_204_440 | F029331 | MDTRSTHQYQPTPERTPERTAQILRESGIVARAIARHRREAALQARTEEAQEMEVLHRGVCRMALEVVRANQPISRAA |
| Ga0334924_030244 | Ga0334924_030244_497_652 | F009946 | MLERLLDIEVGEHGGVTEEIELICTRTGFRLRFLIHHIGEGFFRSVELGPS |
| Ga0334924_031405 | Ga0334924_031405_46_213 | F071620 | VRDLLLLLVAIVAAVGCAYYYVVAVLDQHRALSRSAALAFFVFSLIFAVFFRRIL |
| Ga0334924_031608 | Ga0334924_031608_3_140 | F046866 | MSTNNEVCLAWLAEALRRLRPAGQTKVVGYLEAVLEEVLFETKVHT |
| Ga0334924_031722 | Ga0334924_031722_316_642 | F067090 | MMAAMLLSTQRAEADTIHDVVSQTWPAPLVPTAEQIAYHEGGGVVNDGYCGWGMLPSTQALLGIPYGMTDDPYYCSAKAYELYRMYGWVPWTTYGWYTPGAGRTPITY |
| Ga0334924_031862 | Ga0334924_031862_324_653 | F018678 | MREEQDPLGDGREDALTRLIKEEAGEGHTVWASFNWVRPIELEQALEQQNRLTELVEAGRLVFKTAAIEEAIEEWSASKLRRVQSMHSAIILASEEELSLSRAMPMPPS |
| Ga0334924_036295 | Ga0334924_036295_1_237 | F010813 | IVVDQSFTVTSEGDNSNQCAGIQGVANTGNAQNQLDLIQYGSEADDFEFDEVGSSVDVSPSSTTECTQEVNQAASASG |
| Ga0334924_036654 | Ga0334924_036654_218_463 | F004218 | MARTFTLDTGISPSELLARARRAAAENGAIFVGDEVSGRFAHELVRGEYRMVGQTAVVDITDKHWMLPWPVLEVRLREFLR |
| Ga0334924_037273 | Ga0334924_037273_58_408 | F009555 | MAQIIERVQARYESREMPFGKVYEWRPVRVAMECDCGQKVTLSATSIRTTCSRCGADLGSFVHGIRERESRLPDKLTHPWFYDARERALQHEHDEAAHREGSRWRYNDITAATNEE |
| Ga0334924_037723 | Ga0334924_037723_274_579 | F086616 | MSQEPHIPRRYVTIRGKRATAEVWNSIPGRENEEIWLKGVRPIVKLAGEEGESAHNLMGRIHAALSEVGLRRRAQKFVMRAYYLGSYDDVLRLAEDYVEFE |
| Ga0334924_038616 | Ga0334924_038616_76_258 | F043687 | MAQGTVKDNVRDELDEAAGRGRREREERKETTPEEIARQPGSGGVKDNVRDEWADSQQRR |
| Ga0334924_039764 | Ga0334924_039764_276_431 | F009946 | MLERLLDIEVSEHGTVTEEIELICPMTGFRRRFLVHRIGEGFFRSMDLGPS |
| Ga0334924_040077 | Ga0334924_040077_302_601 | F042091 | TFKAKETITVDSPTLEHIFALLNGCSANFKYLCDNDIFVFATKNYLASLDNPESGKALNLLGVWTDTWPDASEELADGLDEAVQSIKFILAATAGGRND |
| Ga0334924_041085 | Ga0334924_041085_95_592 | F097687 | MGATELERLGRELSSRTEEVVARMMQRSAASTTLARVVEESFEDVGTVSTVAVARWMAGEGEAVAREVGQESWRIFAQLASQREAPLNEVTKRCLRWRDCTLEVLDESAADLGLPAETLATARGMVQRSLDVTLVRMCQSFEDERQRAHEELTSREKELVFLATHD |
| Ga0334924_042655 | Ga0334924_042655_8_217 | F030871 | MREVLKDRFGDIPVQVPRSEIEALGIEIGLDDPAEAARIFDRLKGISWRGDYVRSEEGWVAAWVREVIC |
| Ga0334924_042662 | Ga0334924_042662_1_141 | F052381 | DAYRIRRIYRRLARMRGRGHIRNLTVFIRHENVIRLLNFLGYRQDE |
| Ga0334924_043254 | Ga0334924_043254_166_579 | F006886 | QQFEQQNQTKAPEVTNIERFWTLTGNWGEFGSYFGAGLSASLIVRAIPALIPAAVILIPAAGLGLLVHTLTADGSAKLRSQLILIAVGTALLSANWDAWLAWVIANSKLLIFSFALIVITVGFVAAQLWSKLSNVNQ |
| Ga0334924_043395 | Ga0334924_043395_433_579 | F008025 | MAGIGKKIEGAAKKAAKDKASGDKKGKGTGGSKSGVDKAEKALKNRFK |
| Ga0334924_044193 | Ga0334924_044193_222_485 | F009736 | MPLSDPQQQFLENWMRSKAIVQCPTCGDAQWQFAQAAYVRALLEQGESDMSEEKGVVKVGCGNCGYVMLLDAETVGIRGLWAEGREL |
| Ga0334924_044597 | Ga0334924_044597_122_304 | F063432 | MDDDSFIITPTSHTPYAELDLLLNESDRAWTTLAPLQDDAERPDTVDAMNAQILAGLVSP |
| Ga0334924_044659 | Ga0334924_044659_2_514 | F009290 | MCGKNIVASTYKPTRRYTVEATAKNIDKTARTAREMAEAQRDSFEALAENFASAQRRSMGLAEGGLEFVRLQEDNARAAQEFFANGVRLLQRQQKNAEFVQGWTGDAVEVLREQAEHNARTTEAFARAISRQQESFRTLTQGWVGAYTDFFSPFAYARQGMRAFQQATRQG |
| Ga0334924_045518 | Ga0334924_045518_178_525 | F022153 | VTVADPRGFTSAFGKLEQAIEELVGAGGVKERLEAATMELSPVFPEDFPAGHLREEYADIRQALAWLPPEEGSGQALAESTLEAMTKEEAGTLAKSLFSLYASAAEAVYGGWHGR |
| Ga0334924_046104 | Ga0334924_046104_202_483 | F004218 | LKHSHECGREKVVARTFMMRTTVEPLSLLARARRVAKENGATLLGDERSGRFSHGMVGSEYRMVGQTVTVTVINKHWMLPWPVVEAQLREIVQ |
| Ga0334924_046166 | Ga0334924_046166_305_520 | F009855 | MHPHLSRQAIVLDVETTRYGRSYAGRRVEITHVEKDPATGGAVGYVVRMGDGGGDELPFEAEEIHIVEAWD |
| Ga0334924_047559 | Ga0334924_047559_79_444 | F062444 | VLLASGFTVPAAAQTDQESEQEGESGETDQLVEGLNEGDNANQCIAVQPVSNTGNAITAVDLIIQYPDGRQEAKRHDKFVLDLIDELDLEMDDVGSTIEMDPEQAVECAQAVDQAATAAS |
| Ga0334924_048005 | Ga0334924_048005_68_361 | F062389 | MLVNKLTELLITSIYSVHTSRRCEIFLTSLDMHLAQYSISNKNDIACREFSEKSALLLESYQEDVPKSLGKAESCLGEAIDLINLIVSASEAGVNNE |
| Ga0334924_048106 | Ga0334924_048106_2_346 | F001042 | VPKDLEAGADDTIVINKLLVNKLTELLINSIYSVHVSRRSEIFLTSLDMHLADFSISNKNDIVCREFTEKSSLLLESYQKDVPKSLGKAESCLGEAIDLINLIVSASEAEANNG |
| Ga0334924_048508 | Ga0334924_048508_177_386 | F022748 | MKKLLRRLVVLGAIAGAIYAARSYLRGESAPTGTVQIVFDDGSTRSLASNTTEGNEFIDTGQKIVEIGL |
| Ga0334924_048783 | Ga0334924_048783_83_397 | F044877 | VPEEIVTLDRKTLEEIFSLIGDCVDTITNLRHSDVFITSAKRCLLDTGNLELASSTEVGKAVLLMNSWLEVIPKSHKEMDAWLQQANAITYLALAPIKLGKSNG |
| Ga0334924_048908 | Ga0334924_048908_358_546 | F034817 | GGEFVQGAFEHQIVLTYKDCGERLVLFGPEEDWRSRHAVFACGSGHRFTLDGRADEEVLVAS |
| Ga0334924_049992 | Ga0334924_049992_153_362 | F012324 | MRAGGIVTGSQELRLPPGYRLDRSDPEVWTLRRPGGWVVARFSARGATKETIGEAAWEDHGCAGEEEYP |
| Ga0334924_051847 | Ga0334924_051847_395_532 | F075779 | MDRERPKASDSQETIPEAWIGQQVMLETTEALSTDLRAAAPVYLED |
| Ga0334924_052195 | Ga0334924_052195_42_287 | F001519 | MGETTGVVVERSAIRGKKGLCKSMRDLAIKSRVLGDGYYYIPIDLWPKAKEPITVHKHDWTVISSIPRTSRAGKKRAAAQK |
| Ga0334924_052712 | Ga0334924_052712_156_527 | F004047 | ERWEWAVRKEKNVQPDQSVSEMAEEVLMRQAKALSHRSGHSLEDARQAVSDTEAGRQLRDLANGEHRHEMAKQWQVGVFWDRAEERLMHQIGSEALSRFAAERPYSWVESYIERLEGKEERAR |
| Ga0334924_055523 | Ga0334924_055523_185_379 | F002921 | MDTRESSAPAHPSTEEHDDTVEAHYASLERPHACIDGWVFIGYVDEHGEERAASYRCRRCVDNR |
| Ga0334924_057425 | Ga0334924_057425_12_419 | F102648 | MERLFENDISNSREVRLEGTGQNRRVRPDRHVDTTDSRARAGVVGGGTGSGATFSRVGTTLLAKGSAPLETHEHAIATAASGVVLGASLVGARFPRLVAWPLTTVGALLGGIGLLRAARAAFFRWGPGRDPDGPE |
| Ga0334924_058835 | Ga0334924_058835_182_448 | F091337 | MGSPASVTTEKHEPPRGKGGAGPRGDPKAATGGVDVAHYSNERPSRGPWPSEAPPTGVLTGVLGELAFYYGACWLHYRSAPLRPGKTR |
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