Metagenome / Metatranscriptome Family F104098

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104098
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	73 residues
Representative Sequence	MQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSATHPDTVEALTLTGETFYLEHRRGQPPG
Number of Associated Samples	63
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.00 %
% of genes near scaffold ends (potentially truncated)	28.71 %
% of genes from short scaffolds (< 2000 bps)	89.11 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.81

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.446 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Sand → Desert → Soil (23.762 % of family members)
Environment Ontology (ENVO)	Unclassified (27.723 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.356 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.86% β-sheet: 11.65% Coil/Unstructured: 50.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.81
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.81
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SCOP family	SCOP domain	Representative PDB	TM-score
a.73.1.1: Retrovirus capsid protein, N-terminal core domain	d1em9a_	1em9	0.61274
a.73.1.1: Retrovirus capsid protein, N-terminal core domain	d2eiaa2	2eia	0.59151
c.124.1.5: IF2B-like	d2a0ua1	2a0u	0.58709
a.24.13.0: automated matches	d6n9ba1	6n9b	0.58124
a.93.1.2: Myeloperoxidase-like	d1q4ga1	1q4g	0.58112

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13481	AAA_25	0.99
PF08241	Methyltransf_11	0.99
PF13586	DDE_Tnp_1_2	0.99
PF07883	Cupin_2	0.99
PF00313	CSD	0.99
PF13730	HTH_36	0.99
PF03288	Pox_D5	0.99
PF01609	DDE_Tnp_1	0.99
PF05239	PRC	0.99
PF13464	DUF4115	0.99
PF07366	SnoaL	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.99
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.99
COG3378	DNA primase, phage- or plasmid-associated	Mobilome: prophages, transposons [X]	0.99
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.99
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.99
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.99
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.44 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.45 %
Unclassified	root	N/A	43.56 %
Viruses	superkingdom	All Organisms → Viruses	0.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.45 %
Unclassified	root	N/A	43.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	52.48 %
Unclassified	root	N/A	43.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.52 %
Unclassified	root	N/A	43.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	40.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.94 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.98 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	1.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	40.59 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.98 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	1.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	40.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.95 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	31.68 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples	4.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.95 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	31.68 %
uncultured Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	4.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.95 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1.98 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.98 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805009\|FNTS007_GKN1E7E02IO5CF	Not Available	507	Open in IMG/M
2209111000\|2209643260	Not Available	540	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c053502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	705	Open in IMG/M
3300000095\|LCrCPGB2aDRAFT_c064198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	634	Open in IMG/M
3300000750\|JGI12272J11983_1118496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	903	Open in IMG/M
3300002568\|C688J35102_118185031	Not Available	536	Open in IMG/M
3300002568\|C688J35102_119814877	Not Available	783	Open in IMG/M
3300002568\|C688J35102_120480614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1104	Open in IMG/M
3300004081\|Ga0063454_102085937	Not Available	503	Open in IMG/M
3300004153\|Ga0063455_100998681	Not Available	606	Open in IMG/M
3300010036\|Ga0126305_10026563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	3113	Open in IMG/M
3300010036\|Ga0126305_10029801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2963	Open in IMG/M
3300010036\|Ga0126305_10795240	Not Available	643	Open in IMG/M
3300010039\|Ga0126309_10005874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	4782	Open in IMG/M
3300010039\|Ga0126309_10053265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1943	Open in IMG/M
3300010039\|Ga0126309_10127076	Not Available	1344	Open in IMG/M
3300010039\|Ga0126309_11212358	Not Available	519	Open in IMG/M
3300010044\|Ga0126310_10043916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2440	Open in IMG/M
3300010044\|Ga0126310_10219746	Not Available	1263	Open in IMG/M
3300010166\|Ga0126306_10258977	Not Available	1329	Open in IMG/M
3300012043\|Ga0136631_10073073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	1291	Open in IMG/M
3300012045\|Ga0136623_10000846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9828	Open in IMG/M
3300012045\|Ga0136623_10254569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300012045\|Ga0136623_10256598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	744	Open in IMG/M
3300012091\|Ga0136625_1343710	Not Available	501	Open in IMG/M
3300012093\|Ga0136632_10321039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	696	Open in IMG/M
3300012183\|Ga0136624_1160978	Not Available	729	Open in IMG/M
3300012184\|Ga0136610_1027108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2101	Open in IMG/M
3300012184\|Ga0136610_1028429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	2051	Open in IMG/M
3300012184\|Ga0136610_1051317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1491	Open in IMG/M
3300012678\|Ga0136615_10074821	Not Available	1672	Open in IMG/M
3300012679\|Ga0136616_10099063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1377	Open in IMG/M
3300012680\|Ga0136612_10115412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1362	Open in IMG/M
3300012681\|Ga0136613_10757461	Not Available	518	Open in IMG/M
3300012684\|Ga0136614_10065739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	2744	Open in IMG/M
3300013011\|Ga0169967_1021723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1315	Open in IMG/M
3300013024\|Ga0170682_1107954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	503	Open in IMG/M
3300014488\|Ga0182001_10013375	Not Available	1811	Open in IMG/M
3300014488\|Ga0182001_10095937	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300014488\|Ga0182001_10187477	Not Available	744	Open in IMG/M
3300014488\|Ga0182001_10267953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	671	Open in IMG/M
3300017695\|Ga0180121_10239653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	679	Open in IMG/M
3300017787\|Ga0183260_10051242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3067	Open in IMG/M
3300017787\|Ga0183260_10112969	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300017787\|Ga0183260_11008798	Not Available	511	Open in IMG/M
3300017789\|Ga0136617_10199223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1688	Open in IMG/M
3300017789\|Ga0136617_10363054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1176	Open in IMG/M
3300018422\|Ga0190265_10242642	Not Available	1844	Open in IMG/M
3300018465\|Ga0190269_10254388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	992	Open in IMG/M
3300018465\|Ga0190269_10399131	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300018465\|Ga0190269_11056842	Not Available	621	Open in IMG/M
3300018465\|Ga0190269_11219892	Not Available	593	Open in IMG/M
3300018465\|Ga0190269_11671437	Not Available	535	Open in IMG/M
3300018466\|Ga0190268_11814876	Not Available	550	Open in IMG/M
3300018719\|Ga0193596_1056417	Not Available	566	Open in IMG/M
3300018757\|Ga0193612_1067356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	602	Open in IMG/M
3300018875\|Ga0193608_1083265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	702	Open in IMG/M
3300018910\|Ga0193598_1058041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	918	Open in IMG/M
3300018914\|Ga0193594_1031906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1386	Open in IMG/M
3300018914\|Ga0193594_1081671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	739	Open in IMG/M
3300018920\|Ga0190273_10168578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1332	Open in IMG/M
3300018920\|Ga0190273_10188277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1277	Open in IMG/M
3300018920\|Ga0190273_11005309	Not Available	688	Open in IMG/M
3300018920\|Ga0190273_11540578	Not Available	590	Open in IMG/M
3300018931\|Ga0193601_1030897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1712	Open in IMG/M
3300018931\|Ga0193601_1123372	Not Available	715	Open in IMG/M
3300018939\|Ga0193593_1034453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1281	Open in IMG/M
3300018946\|Ga0193599_1034001	All Organisms → Viruses → Predicted Viral	1842	Open in IMG/M
3300018946\|Ga0193599_1126827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium	836	Open in IMG/M
3300018946\|Ga0193599_1185634	All Organisms → cellular organisms → Bacteria → Terrabacteria group	656	Open in IMG/M
3300018984\|Ga0193605_1029607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1691	Open in IMG/M
3300018984\|Ga0193605_1096609	Not Available	900	Open in IMG/M
3300018984\|Ga0193605_1240131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	522	Open in IMG/M
3300019135\|Ga0193602_1058839	Not Available	908	Open in IMG/M
3300019135\|Ga0193602_1059434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	903	Open in IMG/M
3300019142\|Ga0193597_1141791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	721	Open in IMG/M
3300019377\|Ga0190264_10567498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	799	Open in IMG/M
3300019377\|Ga0190264_11913963	Not Available	539	Open in IMG/M
3300019767\|Ga0190267_10427065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	752	Open in IMG/M
3300019767\|Ga0190267_11163819	Not Available	561	Open in IMG/M
3300020181\|Ga0196958_10144250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	819	Open in IMG/M
3300020181\|Ga0196958_10298875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	595	Open in IMG/M
3300020181\|Ga0196958_10351976	Not Available	553	Open in IMG/M
3300024426\|Ga0196960_10166141	Not Available	693	Open in IMG/M
3300028705\|Ga0307276_10027743	Not Available	1155	Open in IMG/M
3300030513\|Ga0268242_1062068	Not Available	722	Open in IMG/M
3300032002\|Ga0307416_103502860	Not Available	525	Open in IMG/M
3300033989\|Ga0334924_005617	Not Available	1411	Open in IMG/M
3300034005\|Ga0334930_048248	Not Available	716	Open in IMG/M
3300034006\|Ga0334934_020335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	906	Open in IMG/M
3300034131\|Ga0334911_019385	Not Available	935	Open in IMG/M
3300034132\|Ga0334915_006334	Not Available	2050	Open in IMG/M
3300034132\|Ga0334915_052000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	827	Open in IMG/M
3300034133\|Ga0334916_060279	Not Available	517	Open in IMG/M
3300034136\|Ga0334933_023221	Not Available	891	Open in IMG/M
3300034173\|Ga0334925_082509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	692	Open in IMG/M
3300034393\|Ga0334914_006233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	1239	Open in IMG/M
3300034402\|Ga0334960_033498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	699	Open in IMG/M
3300034687\|Ga0334905_051452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	625	Open in IMG/M
3300034779\|Ga0334945_076671	Not Available	605	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.01%
Host-Associated	Host-Associated	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.22%
Aquatic	Environmental → Aquatic	20.79%
Plants	Host-Associated → Plants	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.24%
Freshwater	Environmental → Aquatic → Freshwater	20.79%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.62%
Sand	Environmental → Terrestrial → Soil → Sand	27.72%
Ice	Environmental → Aquatic → Freshwater → Ice	20.79%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	5.94%
Loam	Environmental → Terrestrial → Soil → Loam	4.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.69%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	27.72%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	20.79%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	6.93%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	5.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.95%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	23.76%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	20.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.84%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.90%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.95%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	4.95%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	3.96%
Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.99%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805009	Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site	Environmental	Open in IMG/M
2209111000	Soil microbial communities from Colorado Plateau, Greene Butte sample - Dark Crust, Colorado Plateau, Green Butte	Environmental	Open in IMG/M
3300000095	Soil microbial communities from Colorado Plateau, Green Butte sample - Light Crust, Colorado Plateau, Green Butte 2	Environmental	Open in IMG/M
3300000750	Soil microbial communities from Moab, Utah, sample - Soil Crust Dry out, 3 days (biological replicate A) D5A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005506	Soil microbial communities from Colorado Plateau, USA - Soil Crust after dry out 3A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012043	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ601 (22.06)	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012091	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ483 (23.06)	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012183	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ469 (22.06)	Environmental	Open in IMG/M
3300012184	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012679	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ299 (21.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300013011	Gypsum crust endolithic microbial communities from the Atacama Desert, Chile - KM37	Environmental	Open in IMG/M
3300013024	Gypsum crust hypoendolithic microbial communities from the Atacama Desert, Chile - KM37, HE	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018719	Soil crust microbial communities from Colorado Plateau, Utah, USA - late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018757	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018875	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 49.5 hrs after wetting v1	Environmental	Open in IMG/M
3300018910	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300018914	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 42 hrs after wetting v1	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300018931	Soil crust microbial communities from Colorado Plateau, Utah, USA - early stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018939	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300018946	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid-late stage, 0 min after wetting v1	Environmental	Open in IMG/M
3300018984	Soil crust microbial communities from Colorado Plateau, Utah, USA - earlymid stage, 9 hrs after wetting v1	Environmental	Open in IMG/M
3300019135	Soil crust microbial communities from Colorado Plateau, Utah, USA - midlate stage, 18 hrs after wetting v1	Environmental	Open in IMG/M
3300019142	Soil crust microbial communities from Colorado Plateau, Utah, USA - mid late stage, 3 min after wetting v1	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300030513	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG (v2)	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300033989	Biocrust microbial communities from Mojave Desert, California, United States - 20HNC	Environmental	Open in IMG/M
3300034005	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 26HNS	Environmental	Open in IMG/M
3300034006	Biocrust microbial communities from Mojave Desert, California, United States - 30SMC	Environmental	Open in IMG/M
3300034131	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 7HMS	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034133	Biocrust microbial communities from Mojave Desert, California, United States - 12HMC	Environmental	Open in IMG/M
3300034136	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 29HNS	Environmental	Open in IMG/M
3300034173	Biocrust microbial communities from Mojave Desert, California, United States - 21HNC	Environmental	Open in IMG/M
3300034393	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 10HMS	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M
3300034687	Soil microbial communities from Mojave Desert, California, United States - 1NOC	Environmental	Open in IMG/M
3300034779	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 41SMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS007_04282920	2119805009	Soil	MEMMHWYNPLTMEEEEVSTPMSDAQAIEILSGRRDSDRFIEEYRRRRAMQTDVVKALIFTGGMFYREHRRGQPSG
2209800121	2209111000	Soil	WYNPVTKEEEDVPAPVNDEQAIGMLSGHPDSDRFIEEYRRLSATHPDTVEALTLTGETFYLEHRRGQPPG
LCrCPGB2aDRAFT_0535021	3300000095	Soil	MQTMHWYNPVTKEEEDVPVPLNDEQAIEMLSGHWDSDRFIEEYRRIRATHPDTIDALTLTGETFYLEHRRGQPPG*
LCrCPGB2aDRAFT_0641981	3300000095	Soil	MQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSAXHPDTVEALTLTGETFYLEHRRGQPPG*
JGI12272J11983_11184961	3300000750	Soil	MEMMHWYNPLTMEEEEVSAPMSDPQAIEILSGHQDSDRFIEEYRRRRGMQTDVVKALIFTGEMFYREHRRGQPPG*
C688J35102_1181850311	3300002568	Soil	TEEDVSAPMTDAQAIEVLSGHPRSVRYIEEYQRLRAIHPDIVIALTLTGETFYWEHRRGQPPG*
C688J35102_1198148771	3300002568	Soil	MQMMHWYNPTTRNEEDVPAPMSDAQAIEMLSGHPDSGRFIEEYRRVRAIQLDRVEALISTGETFYWEHRRGQPPG*
C688J35102_1204806142	3300002568	Soil	MQMMHWYNPTTRTEEDVPVPMSDAQAIEMLSGHPNSEQFIEEYRRLRAIHEVVVEALALTGETFYWEHRRGQPPG*
Ga0063454_1020859371	3300004081	Soil	MQMMHWYNPITRTEEDVSAPMTDAQAIEVLSGHPRSVRYIEEYQRLRAIHPDIVIALTLTGETFYWEHRRGQPPG*
Ga0063455_1009986812	3300004153	Soil	METMHWYNPLKMEEEDVPIPMSDAQAIEMLSGHPDSDRFIEEYRRLSATHQDHVEALALTGETFYWEHRQGQPPG*
Ga0068912_100629363	3300005506	Soil	SAPMSDPQAIEILSGHQDSDRFIEEYRRRRGMQTDVVKALIFTGEMFYREHRRGQPPG*
Ga0126305_100265633	3300010036	Serpentine Soil	MEKMRWYNPTTKEEEEVPTPMSDAQAIEMLSGHPDSDRFIEEYRRLCATHQDHVEALVLTGETFYREHRRGQPPG*
Ga0126305_100298015	3300010036	Serpentine Soil	MEMMHWYNPLAMEEEDVPVPMSDAQAIEMLSGHPDSDRFIEEYRRLSAAHQDHVEALVLTGETFYREHRRGQPPG*
Ga0126305_107952401	3300010036	Serpentine Soil	MEMMHWYNPLTMEEEEVSAPMSDAQAIEMLSGHPDSERFIEEYRRLCATHQDHVEALVLTGETFYREHRRGQPPG*
Ga0126309_100058744	3300010039	Serpentine Soil	MQKIRWYNPTTREEEEVPAPMSDAQAIELLSGDPDSDRFIEEYRRLSAAHPDTVDALTLTGETFYWEHRQGQPPG*
Ga0126309_100532654	3300010039	Serpentine Soil	MEMMHWYNPLKMEEEDVPIPTSDAQAIEMLSGHPDSERFIEEYRRLSAAYPDQVEALVLTGDTFYLEHRRGQPPG*
Ga0126309_101270761	3300010039	Serpentine Soil	MQMMRWYNPKIRAEEEVQAPMSEAQAIEMLSGNSRSNQFIQEYRRMRAMHSNIVVALTLTGETFYWEHRKGQPPH*
Ga0126309_112123581	3300010039	Serpentine Soil	PTTREEEEVPTPMSDAQAIEMLSGHQKSVRFIEEYQRLRAMHPDIGVALTLTGETFYWEHRRAQPPG*
Ga0126310_100439164	3300010044	Serpentine Soil	MMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSATHPDTIDALTLMGETFYLEHRRRQPPG*
Ga0126310_102197462	3300010044	Serpentine Soil	METMHWYNPLKMEEEDAPVPMSDAQAIELLSGHPDSDRFIEEYRRLSATHQDLVEALALTGETFYWEHRQGQPPG*
Ga0126306_102589773	3300010166	Serpentine Soil	MEMMHWYNPLAMKEEDVPVPMSDAQAIEMLSGHPDSERFIEEYRRLCATHQDHVEALVLTGETFYREHRRGQPPG*
Ga0136631_100730733	3300012043	Polar Desert Sand	MHWYNPTTRMEEDVPAPMSDAQAIEMLSRHQDSDRFIEEYRRLSAAHPNTVEALALTGETFYREHRRGQPPG*
Ga0136623_1000084617	3300012045	Polar Desert Sand	MQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHLDSDRFIEEYRRRSATHPDTIDALTLTGETFYWEHRRGQPPG*
Ga0136623_102545691	3300012045	Polar Desert Sand	MELMHWYNPLTMEEEKVHVPMSDAQAIEILSGHPDSDRFIEEYRRRRAMQTDIVKALIFTGEMSYREHRRGQPPGR*
Ga0136623_102565982	3300012045	Polar Desert Sand	MEEEDVPAPMSDAQAIEILSGHPDSDRFIEEYRRLCATHQDHVEALVLTGETFYWERRRGQPPG*
Ga0136625_13437101	3300012091	Polar Desert Sand	MEMMHWYNPLTMEEEDVSAPMSYAQAIEILSGHQDSDRFIEEYRRRRAMQADVVKALIFTGEMFYREQRRGQPPG*
Ga0136632_103210391	3300012093	Polar Desert Sand	MEMMHWYNPVTKEEEDVPVPMNDEQAIDMLSGHADSDRIIEEYRRRRAMQTDVVKALIFTGEMFYR
Ga0136624_11609781	3300012183	Polar Desert Sand	MHWYNPTTRMEEDVPAPMSDAQAIEMLSGHQDSDRFIEEYRRLSAAHPNTVEALALTGETFYREHRRGQPPG*
Ga0136610_10271084	3300012184	Polar Desert Sand	MEMMHWYNPVTKEEEDVPVPMNDEQAIDMLSGHADSDRIIEEYRRRRAMQTDVVKALIFTGEMFYREHRRGQPPG*
Ga0136610_10284293	3300012184	Polar Desert Sand	MQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHLDSDRFIEEYRRRSATHPDTIDALPLTGETFYWEHRRGQPPG*
Ga0136610_10513173	3300012184	Polar Desert Sand	KGGPMELMHWYNPLTMEEEKVHVPMSDAQAIEILSGHPDSDRFIEEYRRRRAMQTDIVKALIFTGEMSYREHRRGQPPGR*
Ga0136615_100748213	3300012678	Polar Desert Sand	MAKGGPMEMMHWYNPLTMEEEDVSAPMSYAQAIEILSGHQDSDRFIEEYRRRRAMQADVVKALIFTGEMFYREQRRGQPPG*
Ga0136616_100990632	3300012679	Polar Desert Sand	MQTMHWYNPVTKEEEDGPEPMNDEQAIDMPSGHPDSDRFIEEYRRRRATHPDIVDALTLTGETFCRERRRGQPPG*
Ga0136612_101154121	3300012680	Polar Desert Sand	MHWYNPTTRMEEDVPAPISDAQAIEMLSGHSDSDRFIEEYRRLSATHPDTVEALALTGETFYREHRRGQPPG*
Ga0136613_107574611	3300012681	Polar Desert Sand	NKLMAKGGPMEMMHWYNPLTMEEEDVSAPMSYAQAIEILSGHQDSDRFIEEYRRRRAMQADVVKALIFTGEMFYREQRRGQPPG*
Ga0136614_100657396	3300012684	Polar Desert Sand	VHWYNPTTQTEEDVTAPMSDAQAIEMLSGHSDSDRFIEEYRRLSATHPDTVEALALTGETFYREHRRGQPPG*
Ga0169967_10217233	3300013011	Rock	MQTMHWYNPVTKEEEDVPAPLNDEQAIEMLSGHPDSGRFIEEYRRVRATQSDTVDALTLTGEMLYLEHRRGQPPG*
Ga0170682_11079541	3300013024	Rock	PMQTMHWYNPVTKEEEDVPAPLNDEQAIEMLSGHPDSGRFIEEYRRVRATQSDTVDALTLTGEMLYLEHRRGQPPG*
Ga0182001_100133752	3300014488	Soil	MHWYNPTTRDDEDVPIPQSEAQAIEMLSGHPDSDRFIEEYRRIRSRHPGFVDALIFTGKQFRWEHRRGQPPG*
Ga0182001_100959372	3300014488	Soil	MEEEEVSAPMSDAQAIEMLSGHRDSDRFIEEYRIRREMQTDVVKALIFTGEMFYREHRRGQPPN*
Ga0182001_101874771	3300014488	Soil	TRAQEEVPAPMSEAQAIEILSGHQRSDRFIEEYRRLRGVHRDIVVALTLTGETFYWDHRKGQPPH*
Ga0182001_102679531	3300014488	Soil	MQTTHWYNPVTKEEEDVPVPLNDEQAIEMLSGHPDSDRFIEEYRRLSATHPDTVEALTLTGETFYLEHRRGQPPG*
Ga0180121_102396532	3300017695	Polar Desert Sand	MEIMHWYNPVTKVEEDVPSPMSDAQAIEMLSGHSDSDRFIEEYRRLSATHPDTVEALALTGETFYREHRRGQPPG
Ga0183260_100512426	3300017787	Polar Desert Sand	MHWYNPTTRMEEDVPAPMSDAQAIEMLSRHQDSDRFIEEYRRLSAAHPNTVEALALTGETFYREHRRGQPPG
Ga0183260_101129692	3300017787	Polar Desert Sand	MMHWYNPVIKEEEDVPAPMSDAQAIEMLSGHPDSDRFIDEYRRLRATQIYSDTVEALALTGETFYREHRMGQPPG
Ga0183260_110087981	3300017787	Polar Desert Sand	MEMMHWYNPLTMEEEDVPAPMSDAQAIEILSGHPDSDRFIEEYRRLCATHQDHVEALVLTGETFYWERRRGQPPG
Ga0136617_101992232	3300017789	Polar Desert Sand	MHWYNPTTRMEEDVPAPMSDAQAIEMLSGHQDSDRFIEEYRRLSAAHPNTVEALALTGETFYREHRRGQPPG
Ga0136617_103630541	3300017789	Polar Desert Sand	MELMHWYNPLTMEEEKVHVPMSDAQAIEILSGHPDSDRFIEEYRRRRAMQTDIVKALIFTGEMSYREHRRGQPPGR
Ga0190265_102426424	3300018422	Soil	MQTIHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRRSATHPDTIDALTLTGETFYWEHRRGQPPG
Ga0190269_102543883	3300018465	Soil	MQTMHWYNPVTKEDEDVPAPMNDEQAIGMLSGHSDSDRFIEEYRRRSATHPDTIDALTLTGETFYWEHRRGQPPG
Ga0190269_103991311	3300018465	Soil	MQRMHWYNPLKMEEEDVPVPMSDAQAIEMLSGHPDSDRFIEEYRRVSATHQDHIEALVLTGETFYWE
Ga0190269_110568421	3300018465	Soil	MQTMHWCNPVTKEEEDVPAPMNDEQAIGMLSGHSDSDRFIEEYRRLSATHPDTIDALTLTGETFYLEHRRGQPPG
Ga0190269_112198921	3300018465	Soil	MEMMHWYNPLTMEEEEVSAPMSDAQAIEILSGHQDSDRFIEEYRRRRGMQTDVVKALIFTGEIFYSEHRKGQPPN
Ga0190269_116714371	3300018465	Soil	MQTIHRYNPVTKKEEDVPVPLNDEQAIEMLSGHSDSDRFIEEYRRIRATHPDTIDALTLTGETFYLEHRRGQPPG
Ga0190268_118148762	3300018466	Soil	LKREEEDVPIPMSDAQAIEMLSGHPDSDRFIEEYRRLSATQQDRLEALSFTGETFYWEHRRAQPPG
Ga0193596_10564172	3300018719	Soil	FMEMMHWYNPLTMEEEGVSAPMSDAQAIEILSGHRDSERFIEEYRRRRAMQTDVVKALIFTGEMFYREHRRGQPPG
Ga0193612_10673561	3300018757	Soil	MQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSATHPDTVEALTLTGETFYLEHRRGQPPG
Ga0193608_10832651	3300018875	Soil	CKLMAKGDLMQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSARHPDTVEALTLTGETFYLEHRRGQPPG
Ga0193598_10580411	3300018910	Soil	MQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSARHPDTVEALTLTGETFYLEHRRGQPPG
Ga0193594_10319063	3300018914	Soil	MEMMHWYNPLTMEEEEVSAPMSDAQAIEILSGHRDSDRFIEEYRRRRAMQTDVVKALIFTGEMFYREHRRGQLPG
Ga0193594_10816712	3300018914	Soil	MQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSATHPDTIDALTLTGETFYLEHRRGQPPG
Ga0190273_101685782	3300018920	Soil	MQTMHWYNPVTRNEEDVLAPMSDAQAIEMLSGHLRSDRFIEEYRRLREMHSDIVVALTLTGEMFYWEHRGSQPPG
Ga0190273_101882772	3300018920	Soil	MQTMHWYNPVTKEEEDVPVPLNDEQAIGMLSGHSDSDRFIEEYRRRSATHPDTIDALTLTGETFYWEHRRGQPPG
Ga0190273_110053091	3300018920	Soil	MQTMHWYNPLTMEEEEVSAPMSDAQAIEMLSGHRDSDRFIEEYRIRREMHADVVKALIFTGEIFYSEHRRGQPPG
Ga0190273_115405782	3300018920	Soil	MQTMQWYTPKTRAQEEVPASISEAQPIEMLSGHPKSDRFIEEYRRLRAMLPDIVVALTLTGDTFYWEHGKRQPPN
Ga0193601_10308974	3300018931	Soil	MEMMHWYNPLTMEEEGVSAPMSDAQAIEILSGHRDSERFIEEYRRRRAMQTDVVKALIFTGEMFYREHRR
Ga0193601_11233721	3300018931	Soil	VTKEEEDVPVPLNDEQAIEMLSGHSDSDRFIEEYRRIRATHPDTIDALALTGETFYLEHRRGQPPG
Ga0193593_10344532	3300018939	Soil	MQTMHWYNPVTKEEEDVPVPLNDEQAIEMLSGHWDSDRFIEEYRRIRATHPDTIDALTLTGETFYLEHRRGQPPG
Ga0193599_10340011	3300018946	Soil	MEEEEVSAPMSDAQAIEILSGHRDSDRFIEEYRRRRAMQTDVVKALIFTGEMFYREHRRGQLPG
Ga0193599_11268271	3300018946	Soil	VSAPMSDAQAIEILSGHQDSDRFIEEYRRRRGMQTDVVKALIFTGEMFYREHRRGQPPG
Ga0193599_11856341	3300018946	Soil	MEMMHWYNPLTMEEEEVSAPMSDPLAIEILSGHQDSDRFIEEYRRRRGMQTDVVKALIFTGEMFYR
Ga0193605_10296072	3300018984	Soil	MEMMHWYNPLTMEEEGVSAPMSDAQAIEILSGHRDSERFIEEYRRRRAMQTDVVKALIFTGEMFYREHRRGQPPG
Ga0193605_10966092	3300018984	Soil	MRVMQWYNPTTRKEENVPAPMSDAQAIEMLSGHRYSNRFIEEYRRMRETHSDVVVALTLTGETFYWEHRVTQPPG
Ga0193605_12401311	3300018984	Soil	MQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSATHPDTIEALTLTGETFYLEHRRGQPPG
Ga0193602_10588391	3300019135	Soil	MQTMHWYNPVTKEEEDVPTPMLDAQAIEMLSGHPDSDRFIEEYRRLSARHPDIIDALTLTEETFY
Ga0193602_10594341	3300019135	Soil	MEMMHWYNPLTMEEEEVSAPMSDAQAIEILSGHRDSERFIEEYRRRRAMQTDVVKALIFTGEMFYREHRRGQPPG
Ga0193597_11417912	3300019142	Soil	MQTMHWYNPVTKEEEDVPVPLNDEQAIEMLSGHSDSDRFIEEYRRIRATHPDIIDALALTGETFYLEHRRGQPPG
Ga0190264_105674982	3300019377	Soil	MQTMHWYNPVTKEEEDVPVPMNDEQAIGMLSGHSDSDRFIEEYRRRSATHPDTIDALTLTGETFYWEHRRGQPPG
Ga0190264_119139631	3300019377	Soil	MQTMHWYNPLTMEEEEVSAPMSDAQAIEMLSGHRDSDRFIEEYRIRREMQTDVVKALIFTGE
Ga0190267_104270651	3300019767	Soil	MAKGGLMQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHSDSDRFIEEYRRLSATHPDTIDALTLTGETFYWEHRRGQPPG
Ga0190267_111638191	3300019767	Soil	MELMHWYNPLTMEEEAIPFPTSEAQAIEILSGHPKSNRFIEEYQRLHAIHPDIVIALTLT
Ga0196958_101442501	3300020181	Soil	TAKGGPMQTMHWYNPVTKEEEDVPVPLNDEQAIEMLSGHPDSDRFIEEYRRIRATHPDPIDALTLAGETFYLEHRRGQPPG
Ga0196958_102988751	3300020181	Soil	EEVPAPVSEAQAIEMLSGHPHSDRFIEEYRRIRGTHPDIVEALTLTGETFYWEHLEGQPP
Ga0196958_103519762	3300020181	Soil	MEMMHWYNPLTMEEEEVSAPMSDAQAIEILSGHRDSDRFIEEYRRRRGMQTDVVKALIFTGEMFYREHRRGQPPG
Ga0196960_101661411	3300024426	Soil	MEMMHWYNPLTMEEEEVSAPMSDAQAIEKLSGHRDSDRFIEEYRRRRGMQTDVVKALIFTGEMFYREHRRGQPPG
Ga0307276_100277431	3300028705	Soil	MQKIRWYNPTTWEEEEVPAPMSEAQAIEMLSGHPDSDRFIEEYRRLSATHRDYVEALALTGETFYWEHRRAQPPG
Ga0268242_10620681	3300030513	Soil	MRTMHWYNPTTRDDEDVPIPQSEAQAIEMLSGHPDSDRFIEEYRRIRSRHPGFVDALIFTGKQFRWEHRRGQPPG
Ga0307416_1035028601	3300032002	Rhizosphere	MRTMHWYNPMTRSEEEVPAPMSKAQAIEMLSGHPDSDRFIEEYRRLRATHPDIVEALALAGEAFYWEHIRGQPPG
Ga0334924_005617_3_194	3300033989	Hypolithic Biocrust	LVQPGYKEEEDVSTPRSDAQAIEMLSGHPDSDRFIEEYRRLSARHPDTVEALTLTGETFYLEHR
Ga0334930_048248_64_291	3300034005	Sub-Biocrust Soil	MQTMHWYNPVTKEEEDVPTPRSDAQAIEMLSGHPDSDRFIEEYRRLSARHPDTVEALTLTGETFYLEHRRGQPPG
Ga0334934_020335_589_834	3300034006	Biocrust	MAKGVLMQTMHWYNPVTKQEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSARHPDTVEALTLTGETFYLEHRRGQPPG
Ga0334911_019385_466_693	3300034131	Sub-Biocrust Soil	MQTMHWYNPVTKEEEDVPTPRSDAQAIEMLSGHPNSDRFIEEYRRRSATHPDTVEALTLTGETFYLEHRRGQPPG
Ga0334915_006334_505_732	3300034132	Hypolithic Biocrust	MQTMHWYNPVTKEEEDVPTPRSDAQAIEMLSGHPNSDRFIEEYRRLSATHPDTVEALTLTGETFYLEHRRGQPPG
Ga0334915_052000_2_211	3300034132	Hypolithic Biocrust	MQMMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSARHPDTVDALTLTGETFYLEHRR
Ga0334916_060279_3_218	3300034133	Hypolithic Biocrust	HWYNPVTKEEEDVPTPRSDAQAIEMLSGHPNSDRFIEEYRRLSATHPDTVEALTLTGETFYLEHRRGQPPG
Ga0334933_023221_303_530	3300034136	Sub-Biocrust Soil	MQTMHWCNPVTKEEEDVPTPRSDAQAIEMLSGHPNSDRFIEEYRRLSATHPDTVDALTLTGETFYLEHRRGQPPG
Ga0334925_082509_487_690	3300034173	Hypolithic Biocrust	MQMMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSARHPDTVEALTLTGETFYLEH
Ga0334914_006233_663_890	3300034393	Sub-Biocrust Soil	MQTMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSARHPDPVEALTLTGETFYLEHRRGQPPG
Ga0334960_033498_2_184	3300034402	Sub-Biocrust Soil	MQMMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSARHPDTIDALTLT
Ga0334905_051452_123_350	3300034687	Soil	MQMMHWYNPVTKEEEDVPAPMNDEQAIGMLSGHPDSDRFIEEYRRLSARHPDPVEALTLTGETFYLEHRRGQPPG
Ga0334945_076671_194_421	3300034779	Sub-Biocrust Soil	MQTMHWYNPVTKEEEDVPTPRSDAQAIEMLSGHPNSDRFIEEYRRLSATHPDTVDALTLTGETFYLEHRRGQPPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104098

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences