Sample 3300026870

Overview

Basic Information
IMG/M Taxon OID	3300026870 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0099864 \| Gp0111025 \| Ga0208762
Sample Name	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC (SPAdes)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	Y
Use Policy	Open

Dataset Contents
Total Genome Size	41906213
Sequencing Scaffolds	31
Novel Protein Genes	32
Associated Families	32

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria	3
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1
Not Available	17
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2
All Organisms → cellular organisms → Bacteria → Acidobacteria	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Soil And Rhizosphere Microbial Communities From Centre Inrs-Institut Armand-Frappier, Laval, Canada
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil And Rhizosphere Microbial Communities From Centre Inrs-Institut Armand-Frappier, Laval, Canada

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → rhizosphere → soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Laval, Canada
Coordinates	Lat. (^o)	45.54	Long. (^o)	-73.72	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000453	Metagenome / Metatranscriptome	1120	Y
F000466	Metagenome / Metatranscriptome	1105	Y
F000708	Metagenome / Metatranscriptome	926	Y
F002918	Metagenome / Metatranscriptome	521	Y
F005249	Metagenome / Metatranscriptome	407	N
F006093	Metagenome / Metatranscriptome	382	Y
F008040	Metagenome / Metatranscriptome	340	Y
F009995	Metagenome / Metatranscriptome	310	Y
F011973	Metagenome / Metatranscriptome	285	Y
F012271	Metagenome / Metatranscriptome	282	Y
F012366	Metagenome / Metatranscriptome	281	Y
F012372	Metagenome / Metatranscriptome	281	Y
F014333	Metagenome / Metatranscriptome	264	N
F014663	Metagenome / Metatranscriptome	261	Y
F016219	Metagenome / Metatranscriptome	249	Y
F022488	Metagenome / Metatranscriptome	214	Y
F025163	Metagenome / Metatranscriptome	203	Y
F034114	Metagenome / Metatranscriptome	175	Y
F035000	Metagenome / Metatranscriptome	173	Y
F036743	Metagenome / Metatranscriptome	169	N
F041908	Metagenome / Metatranscriptome	159	Y
F041997	Metagenome / Metatranscriptome	159	Y
F043126	Metagenome / Metatranscriptome	157	Y
F054018	Metagenome / Metatranscriptome	140	N
F060881	Metagenome / Metatranscriptome	132	N
F064047	Metagenome / Metatranscriptome	129	Y
F072531	Metagenome / Metatranscriptome	121	N
F073511	Metagenome / Metatranscriptome	120	N
F094118	Metagenome / Metatranscriptome	106	N
F094595	Metagenome	106	Y
F096007	Metagenome	105	Y
F105138	Metagenome / Metatranscriptome	100	N

Family

Category

Number of Sequences

3D Structure?

F000453

Metagenome / Metatranscriptome

1120

F000466

Metagenome / Metatranscriptome

1105

F000708

Metagenome / Metatranscriptome

926

F002918

Metagenome / Metatranscriptome

521

F005249

Metagenome / Metatranscriptome

407

F006093

Metagenome / Metatranscriptome

382

F008040

Metagenome / Metatranscriptome

340

F009995

Metagenome / Metatranscriptome

310

F011973

Metagenome / Metatranscriptome

285

F012271

Metagenome / Metatranscriptome

282

F012366

Metagenome / Metatranscriptome

281

F012372

Metagenome / Metatranscriptome

281

F014333

Metagenome / Metatranscriptome

264

F014663

Metagenome / Metatranscriptome

261

F016219

Metagenome / Metatranscriptome

249

F022488

Metagenome / Metatranscriptome

214

F025163

Metagenome / Metatranscriptome

203

F034114

Metagenome / Metatranscriptome

175

F035000

Metagenome / Metatranscriptome

173

F036743

Metagenome / Metatranscriptome

169

F041908

Metagenome / Metatranscriptome

159

F041997

Metagenome / Metatranscriptome

159

F043126

Metagenome / Metatranscriptome

157

F054018

Metagenome / Metatranscriptome

140

F060881

Metagenome / Metatranscriptome

132

F064047

Metagenome / Metatranscriptome

129

F072531

Metagenome / Metatranscriptome

121

F073511

Metagenome / Metatranscriptome

120

F094118

Metagenome / Metatranscriptome

106

F094595

Metagenome

106

F096007

Metagenome

105

F105138

Metagenome / Metatranscriptome

100

Scaffold	Taxonomy	Length	IMG/M Link
Ga0208762_1000010	All Organisms → cellular organisms → Bacteria → Proteobacteria	2991	Open in IMG/M
Ga0208762_1000195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1482	Open in IMG/M
Ga0208762_1000355	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1276	Open in IMG/M
Ga0208762_1000748	Not Available	1027	Open in IMG/M
Ga0208762_1000754	Not Available	1024	Open in IMG/M
Ga0208762_1000802	Not Available	1003	Open in IMG/M
Ga0208762_1001266	Not Available	868	Open in IMG/M
Ga0208762_1001302	Not Available	861	Open in IMG/M
Ga0208762_1001418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	838	Open in IMG/M
Ga0208762_1001444	All Organisms → cellular organisms → Bacteria → Proteobacteria	834	Open in IMG/M
Ga0208762_1001895	All Organisms → cellular organisms → Bacteria → Proteobacteria	765	Open in IMG/M
Ga0208762_1001944	Not Available	760	Open in IMG/M
Ga0208762_1002046	Not Available	746	Open in IMG/M
Ga0208762_1002225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	724	Open in IMG/M
Ga0208762_1002427	Not Available	706	Open in IMG/M
Ga0208762_1002699	Not Available	684	Open in IMG/M
Ga0208762_1002752	Not Available	680	Open in IMG/M
Ga0208762_1003148	Not Available	652	Open in IMG/M
Ga0208762_1004025	Not Available	603	Open in IMG/M
Ga0208762_1004200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
Ga0208762_1004292	Not Available	591	Open in IMG/M
Ga0208762_1005375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
Ga0208762_1005759	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
Ga0208762_1006147	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
Ga0208762_1006183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
Ga0208762_1006652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
Ga0208762_1006679	Not Available	514	Open in IMG/M
Ga0208762_1006746	Not Available	513	Open in IMG/M
Ga0208762_1006797	Not Available	512	Open in IMG/M
Ga0208762_1006817	Not Available	511	Open in IMG/M
Ga0208762_1006840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0208762_1000010

All Organisms → cellular organisms → Bacteria → Proteobacteria

2991

Open in IMG/M

Ga0208762_1000195

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria

1482

Open in IMG/M

Ga0208762_1000355

All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis

1276

Open in IMG/M

Ga0208762_1000748

Not Available

1027

Open in IMG/M

Ga0208762_1000754

Not Available

1024

Open in IMG/M

Ga0208762_1000802

Not Available

1003

Open in IMG/M

Ga0208762_1001266

Not Available

868

Open in IMG/M

Ga0208762_1001302

Not Available

861

Open in IMG/M

Ga0208762_1001418

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843

838

Open in IMG/M

Ga0208762_1001444

All Organisms → cellular organisms → Bacteria → Proteobacteria

834

Open in IMG/M

Ga0208762_1001895

All Organisms → cellular organisms → Bacteria → Proteobacteria

765

Open in IMG/M

Ga0208762_1001944

Not Available

760

Open in IMG/M

Ga0208762_1002046

Not Available

746

Open in IMG/M

Ga0208762_1002225

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria

724

Open in IMG/M

Ga0208762_1002427

Not Available

706

Open in IMG/M

Ga0208762_1002699

Not Available

684

Open in IMG/M

Ga0208762_1002752

Not Available

680

Open in IMG/M

Ga0208762_1003148

Not Available

652

Open in IMG/M

Ga0208762_1004025

Not Available

603

Open in IMG/M

Ga0208762_1004200

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium

595

Open in IMG/M

Ga0208762_1004292

Not Available

591

Open in IMG/M

Ga0208762_1005375

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium

551

Open in IMG/M

Ga0208762_1005759

All Organisms → cellular organisms → Bacteria → Acidobacteria

539

Open in IMG/M

Ga0208762_1006147

All Organisms → cellular organisms → Bacteria

528

Open in IMG/M

Ga0208762_1006183

All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium

527

Open in IMG/M

Ga0208762_1006652

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria

515

Open in IMG/M

Ga0208762_1006679

Not Available

514

Open in IMG/M

Ga0208762_1006746

Not Available

513

Open in IMG/M

Ga0208762_1006797

Not Available

512

Open in IMG/M

Ga0208762_1006817

Not Available

511

Open in IMG/M

Ga0208762_1006840

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria

511

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0208762_1000010	Ga0208762_10000102	F025163	MQLTLALLEPFPPARQSPRQELDTETRAEALNILARIIAQACETTKQTETTDE
Ga0208762_1000195	Ga0208762_10001951	F022488	MKTLIATVALATALVAPIFTQAATAAPNDVIVGGKSIGQDPDANVRLQLRRDAGSEGF
Ga0208762_1000355	Ga0208762_10003552	F000708	MTKPDLALSQIAARFTQHDVEWSRGAFMIIDRRTTNPIARLRPIPDTDRFELFYWSNVKGRWTNFGNLGRMKLMLESAHEIVESDPMFRIPRGR
Ga0208762_1000748	Ga0208762_10007482	F006093	MQPTNLNLKAIARDAILRGDTKTLFHALDLLERVVPIATFMDFCTELDELRLQGVRPRPH
Ga0208762_1000754	Ga0208762_10007542	F094595	MATSPTPMKKAKQVNRAPQKRTFHFFIRVVDEAGNVIPGAKLKVERIITDARKVIEFMDTPNYSELGLTRVKHEIISTKRGTEEDGATQVG
Ga0208762_1000802	Ga0208762_10008021	F060881	IYALIIAAVLFLPTPARALDIGTRMPIKFGEVFVVRNDGGIRNWSGYFPYGATCPVKWRLPMWLVVTRVVADRVLLTVDLNNQVAELSCPHGTETSMPYAQARKRYAIR
Ga0208762_1000802	Ga0208762_10008022	F105138	MRRRASVTRYGEVIVVKNDGGVKNLTTYFPYGSICHTDLDLKTWLIVKRIVGEQTLLVVDFGVEITRLSCPHETETNMRYAQARKRYEDYVRALDDKFFSDLNGGN
Ga0208762_1001266	Ga0208762_10012662	F096007	MADLAPTVSRHVLAAPASAAAGESRWRVVARTAFPFLVVAVLWEF
Ga0208762_1001302	Ga0208762_10013021	F054018	MRKLDIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY
Ga0208762_1001418	Ga0208762_10014181	F064047	MTLKKSSRAGLVALALGIMLGLFLSVASFDASYAQAPAPERTKRR
Ga0208762_1001444	Ga0208762_10014441	F072531	VVTPSHGYADYYYDAIGAWDVIEQWLARLSGHATVYSFSQANDWVNEPITRSMTYWNDTFHFSLTMGRGILTGLAGLPEAARPNNFMERLTPERVASHVESRRQAVRRWAQANPSFVVRFEDARQRWLEQNRR
Ga0208762_1001895	Ga0208762_10018951	F094118	LSCWSFICMFAVVPFFEPFRLINENVSAGARYSLRSQVPGFLASILVTALLIVIVIRMLRHPYSLHHYGPAQLLIAVGAFGAVGAAIALFQAYRAKRPVSPAAAIRGVPWRRAAILAVFPILALVHLSLGVRDEVPTARDASLRNYLQQHASIAVGQPFRGYATTIWLDKSGELSAGPNQAGLNDAGRYYYGRDFFRARYGETFTETDLWRWNIPTFEEYGEWTSVQAHAFALRLLAPAGTTTHSNYLRAFTID
Ga0208762_1001944	Ga0208762_10019441	F041908	KEGPSGSAIRSLIPSHRELLRSKAVVVSVAETPGQ
Ga0208762_1002046	Ga0208762_10020462	F034114	MPMIMIESVVVAGAVNNNLVSGSAFEFARSQAIVSVGVVQSATGGFATIQAGSDIVAEEFSVPILTTYPIIPDNMYFTDVMNAGDRLVIRYRNP
Ga0208762_1002225	Ga0208762_10022251	F043126	MRSLFAMILAMMVSFPAVSSAQPDQTTLRRVHVMTGAGTLPRNPTNRLEFLRYATTGEPRLTGAQL
Ga0208762_1002427	Ga0208762_10024271	F036743	TRATDGEYQLGGYDRVALVSLTLSAGFGLAGCAAIDDLKVSIFQWLDPVNFTGEGEELLGYAPETRLIPPAEIPKQAARAPSKRIKPATRKLQRPQTVVLPPKKPPISDSPETATPGETEGQSAWPHSMRSRTPNPEAPPSFDGRFCAECWGLPAKAE
Ga0208762_1002699	Ga0208762_10026991	F005249	MVKLTTKEDIALLVEEASEMFEETGCVPDVDGKKVRAEKIVPRAKRYILETIDNPKASYDAAIWHSPGYTLVLSWLSQKWLKYCHKLAPTVLKDADLRLPKDQRKLCLDWAADELTRQITRRRQRFH
Ga0208762_1002752	Ga0208762_10027521	F014333	VTGCSSRGLLGRPQRSYLFAMSSMPPEYLRSELVTPSKLHAAEMPTLRGFDEEFGQAAGVTQLDRTRSILLAVALGAVILGGLTLVWVAVDGGVRPKGASAAPTSSQNTAPAESRELVDRLLSQVEALKSEVRELTEAQQQPAHAIEAEQESRNRAPPLYWYSDPAALSSGAESGPEPRGVVPLPRRPANSRTALR
Ga0208762_1003148	Ga0208762_10031482	F035000	GPGRRMDELLRKAEEMGLNYDEKAELSLLLQAKGRSRAPS
Ga0208762_1004025	Ga0208762_10040251	F012366	PMTRSGRVATLEEAKAQLWKSWDAWKAWAKLEEMP
Ga0208762_1004200	Ga0208762_10042001	F041997	MRIGLFRSTIACLALALGATSPAAAAELIPFKIGISAPVVTIFPVWMGEAGGFYEKEGIKTEVINMEG
Ga0208762_1004292	Ga0208762_10042921	F000453	RQVLEKRPAALCAGQLGQRLGRYRLFHDGVIVRIKFEATDASGKAHKRSSTNHVYSHCLVVHFAAHPPSTLWPKGIAACSHAEWAANPALAERKAHRWRKEPSVEAIEILEARQV
Ga0208762_1005375	Ga0208762_10053751	F000466	MAHVLTYLPKVETLRKWKDEKQVAYQSVVKRDWVATGRIDFATRLNGNSPDADQPSEFKLLIEERRIVESIAGSENLEIQWRPATLKEAKAVVAQYHKYLSEHSLIKT
Ga0208762_1005759	Ga0208762_10057591	F012271	GTLPRPAMAEGAEALIDLLEKIGVDFRVSEVRGALEDILRFGSANIPDLWLSDEEMVEKGLVEE
Ga0208762_1006147	Ga0208762_10061471	F009995	MVKVCDCFPELKDITDARERRYRSHPDKPAPEGPRSFVEVKVTSIGQLNELVDCKK
Ga0208762_1006183	Ga0208762_10061832	F012372	GLKGGIVRKVAVGKTRSSLEKALASIKQNLESRAQ
Ga0208762_1006652	Ga0208762_10066521	F008040	MVKHGALSKSHVHQMLASKDARVRRAAYTLLEASNPGLRRNSELFLEIIRFIWEANPSYDIYREFNKRHLIVPYKVHELISARLKVEKQEQQRAAADQHADEVRRQEGGFFQRLFRRRMPALQSARC
Ga0208762_1006679	Ga0208762_10066791	F016219	TMVAVTYGTHRIPTAKTAERAKAAAPRKGLFARFMDALVESRLQSVHREISRHAHLLPYTLDERGNRLINTVDKMPFSG
Ga0208762_1006746	Ga0208762_10067461	F011973	MALQPHRLEFKPHRLEFIFAMVLAMAVTVLAITTWAAPSYPESDWAAPIPPIYRSQHLNL
Ga0208762_1006797	Ga0208762_10067971	F073511	LQQKKQNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK
Ga0208762_1006817	Ga0208762_10068171	F014663	MTDEAMVRIRPPMKTVWRWSARLARPIVLKDGTRLVTLGDVRMFILQQPEHIQDRSSWHQAAELVILAAELGGSIDAATAQVEDALFLEARYARRWQ
Ga0208762_1006840	Ga0208762_10068402	F002918	MALKLRPTGLGSGIDKDRPDYTVVTGEWEVGRIYETRGGPDNLRWFWSMTVNVL

Scaffold ID

Protein ID

Family

Sequence

Ga0208762_1000010

Ga0208762_10000102

F025163

MQLTLALLEPFPPARQSPRQELDTETRAEALNILARIIAQACETTKQTETTDE

Ga0208762_1000195

Ga0208762_10001951

F022488

MKTLIATVALATALVAPIFTQAATAAPNDVIVGGKSIGQDPDANVRLQLRRDAGSEGF

Ga0208762_1000355

Ga0208762_10003552

F000708

MTKPDLALSQIAARFTQHDVEWSRGAFMIIDRRTTNPIARLRPIPDTDRFELFYWSNVKGRWTNFGNLGRMKLMLESAHEIVESDPMFRIPRGR

Ga0208762_1000748

Ga0208762_10007482

F006093

MQPTNLNLKAIARDAILRGDTKTLFHALDLLERVVPIATFMDFCTELDELRLQGVRPRPH

Ga0208762_1000754

Ga0208762_10007542

F094595

MATSPTPMKKAKQVNRAPQKRTFHFFIRVVDEAGNVIPGAKLKVERIITDARKVIEFMDTPNYSELGLTRVKHEIISTKRGTEEDGATQVG

Ga0208762_1000802

Ga0208762_10008021

F060881

IYALIIAAVLFLPTPARALDIGTRMPIKFGEVFVVRNDGGIRNWSGYFPYGATCPVKWRLPMWLVVTRVVADRVLLTVDLNNQVAELSCPHGTETSMPYAQARKRYAIR

Ga0208762_1000802

Ga0208762_10008022

F105138

MRRRASVTRYGEVIVVKNDGGVKNLTTYFPYGSICHTDLDLKTWLIVKRIVGEQTLLVVDFGVEITRLSCPHETETNMRYAQARKRYEDYVRALDDKFFSDLNGGN

Ga0208762_1001266

Ga0208762_10012662

F096007

MADLAPTVSRHVLAAPASAAAGESRWRVVARTAFPFLVVAVLWEF

Ga0208762_1001302

Ga0208762_10013021

F054018

MRKLDIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY

Ga0208762_1001418

Ga0208762_10014181

F064047

MTLKKSSRAGLVALALGIMLGLFLSVASFDASYAQAPAPERTKRR

Ga0208762_1001444

Ga0208762_10014441

F072531

VVTPSHGYADYYYDAIGAWDVIEQWLARLSGHATVYSFSQANDWVNEPITRSMTYWNDTFHFSLTMGRGILTGLAGLPEAARPNNFMERLTPERVASHVESRRQAVRRWAQANPSFVVRFEDARQRWLEQNRR

Ga0208762_1001895

Ga0208762_10018951

F094118

LSCWSFICMFAVVPFFEPFRLINENVSAGARYSLRSQVPGFLASILVTALLIVIVIRMLRHPYSLHHYGPAQLLIAVGAFGAVGAAIALFQAYRAKRPVSPAAAIRGVPWRRAAILAVFPILALVHLSLGVRDEVPTARDASLRNYLQQHASIAVGQPFRGYATTIWLDKSGELSAGPNQAGLNDAGRYYYGRDFFRARYGETFTETDLWRWNIPTFEEYGEWTSVQAHAFALRLLAPAGTTTHSNYLRAFTID

Ga0208762_1001944

Ga0208762_10019441

F041908

KEGPSGSAIRSLIPSHRELLRSKAVVVSVAETPGQ

Ga0208762_1002046

Ga0208762_10020462

F034114

MPMIMIESVVVAGAVNNNLVSGSAFEFARSQAIVSVGVVQSATGGFATIQAGSDIVAEEFSVPILTTYPIIPDNMYFTDVMNAGDRLVIRYRNP

Ga0208762_1002225

Ga0208762_10022251

F043126

MRSLFAMILAMMVSFPAVSSAQPDQTTLRRVHVMTGAGTLPRNPTNRLEFLRYATTGEPRLTGAQL

Ga0208762_1002427

Ga0208762_10024271

F036743

TRATDGEYQLGGYDRVALVSLTLSAGFGLAGCAAIDDLKVSIFQWLDPVNFTGEGEELLGYAPETRLIPPAEIPKQAARAPSKRIKPATRKLQRPQTVVLPPKKPPISDSPETATPGETEGQSAWPHSMRSRTPNPEAPPSFDGRFCAECWGLPAKAE

Ga0208762_1002699

Ga0208762_10026991

F005249

MVKLTTKEDIALLVEEASEMFEETGCVPDVDGKKVRAEKIVPRAKRYILETIDNPKASYDAAIWHSPGYTLVLSWLSQKWLKYCHKLAPTVLKDADLRLPKDQRKLCLDWAADELTRQITRRRQRFH

Ga0208762_1002752

Ga0208762_10027521

F014333

VTGCSSRGLLGRPQRSYLFAMSSMPPEYLRSELVTPSKLHAAEMPTLRGFDEEFGQAAGVTQLDRTRSILLAVALGAVILGGLTLVWVAVDGGVRPKGASAAPTSSQNTAPAESRELVDRLLSQVEALKSEVRELTEAQQQPAHAIEAEQESRNRAPPLYWYSDPAALSSGAESGPEPRGVVPLPRRPANSRTALR

Ga0208762_1003148

Ga0208762_10031482

F035000

GPGRRMDELLRKAEEMGLNYDEKAELSLLLQAKGRSRAPS

Ga0208762_1004025

Ga0208762_10040251

F012366

PMTRSGRVATLEEAKAQLWKSWDAWKAWAKLEEMP

Ga0208762_1004200

Ga0208762_10042001

F041997

MRIGLFRSTIACLALALGATSPAAAAELIPFKIGISAPVVTIFPVWMGEAGGFYEKEGIKTEVINMEG

Ga0208762_1004292

Ga0208762_10042921

F000453

RQVLEKRPAALCAGQLGQRLGRYRLFHDGVIVRIKFEATDASGKAHKRSSTNHVYSHCLVVHFAAHPPSTLWPKGIAACSHAEWAANPALAERKAHRWRKEPSVEAIEILEARQV

Ga0208762_1005375

Ga0208762_10053751

F000466

MAHVLTYLPKVETLRKWKDEKQVAYQSVVKRDWVATGRIDFATRLNGNSPDADQPSEFKLLIEERRIVESIAGSENLEIQWRPATLKEAKAVVAQYHKYLSEHSLIKT

Ga0208762_1005759

Ga0208762_10057591

F012271

GTLPRPAMAEGAEALIDLLEKIGVDFRVSEVRGALEDILRFGSANIPDLWLSDEEMVEKGLVEE

Ga0208762_1006147

Ga0208762_10061471

F009995

MVKVCDCFPELKDITDARERRYRSHPDKPAPEGPRSFVEVKVTSIGQLNELVDCKK

Ga0208762_1006183

Ga0208762_10061832

F012372

GLKGGIVRKVAVGKTRSSLEKALASIKQNLESRAQ

Ga0208762_1006652

Ga0208762_10066521

F008040

MVKHGALSKSHVHQMLASKDARVRRAAYTLLEASNPGLRRNSELFLEIIRFIWEANPSYDIYREFNKRHLIVPYKVHELISARLKVEKQEQQRAAADQHADEVRRQEGGFFQRLFRRRMPALQSARC

Ga0208762_1006679

Ga0208762_10066791

F016219

TMVAVTYGTHRIPTAKTAERAKAAAPRKGLFARFMDALVESRLQSVHREISRHAHLLPYTLDERGNRLINTVDKMPFSG

Ga0208762_1006746

Ga0208762_10067461

F011973

MALQPHRLEFKPHRLEFIFAMVLAMAVTVLAITTWAAPSYPESDWAAPIPPIYRSQHLNL

Ga0208762_1006797

Ga0208762_10067971

F073511

LQQKKQNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK

Ga0208762_1006817

Ga0208762_10068171

F014663

MTDEAMVRIRPPMKTVWRWSARLARPIVLKDGTRLVTLGDVRMFILQQPEHIQDRSSWHQAAELVILAAELGGSIDAATAQVEDALFLEARYARRWQ

Ga0208762_1006840

Ga0208762_10068402

F002918

MALKLRPTGLGSGIDKDRPDYTVVTGEWEVGRIYETRGGPDNLRWFWSMTVNVL

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300026870: Soil and rhizosphere microbial communities from Laval, Canada - mgLMC (SPAdes)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences