Metagenome / Metatranscriptome Family F073511

Basic Information
Family ID	F073511
Family Type	Metagenome / Metatranscriptome
Number of Sequences	120
Average Sequence Length	93 residues
Representative Sequence	MFRPLLVASLATVAIVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Number of Associated Samples	108
Number of Associated Scaffolds	120

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.33 %
% of genes near scaffold ends (potentially truncated)	40.83 %
% of genes from short scaffolds (< 2000 bps)	78.33 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (55.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (10.000 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 21.51% Coil/Unstructured: 78.49%
Feature Viewer

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Pfam ID	Name	% Frequency in 120 Family Scaffolds
PF08448	PAS_4	19.17
PF03734	YkuD	19.17
PF13343	SBP_bac_6	3.33
PF00072	Response_reg	2.50
PF00196	GerE	1.67
PF01336	tRNA_anti-codon	0.83
PF14579	HHH_6	0.83
PF00905	Transpeptidase	0.83

COG ID	Name	Functional Category	% Frequency in 120 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	19.17
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	19.17

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.00 %
Unclassified	root	N/A	45.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.00 %
Unclassified	root	N/A	45.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.00 %
Unclassified	root	N/A	45.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.50 %
Unclassified	root	N/A	45.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	41.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	20.83 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.17 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10.00 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	4.17 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	5.00 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	4.17 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.83 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.00 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	5.00 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4.17 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.83 %
Rhizobiales bacterium GAS113	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	0.83 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_4433372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1023	Open in IMG/M
2228664022\|INPgaii200_c0336962	Not Available	632	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c016700	Not Available	633	Open in IMG/M
3300000156\|NODE_c0717498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5438	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101464200	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10093613	Not Available	636	Open in IMG/M
3300004479\|Ga0062595_100277380	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300004633\|Ga0066395_10011247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	3322	Open in IMG/M
3300004633\|Ga0066395_10267478	Not Available	923	Open in IMG/M
3300004785\|Ga0058858_1161197	Not Available	884	Open in IMG/M
3300004798\|Ga0058859_11775215	Not Available	740	Open in IMG/M
3300004800\|Ga0058861_11693582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	639	Open in IMG/M
3300004801\|Ga0058860_10000484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1458	Open in IMG/M
3300005162\|Ga0066814_10042092	Not Available	725	Open in IMG/M
3300005163\|Ga0066823_10004711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1750	Open in IMG/M
3300005328\|Ga0070676_10044415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	2586	Open in IMG/M
3300005329\|Ga0070683_100075014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3159	Open in IMG/M
3300005332\|Ga0066388_100065116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3905	Open in IMG/M
3300005332\|Ga0066388_101072043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1360	Open in IMG/M
3300005332\|Ga0066388_104546571	Not Available	706	Open in IMG/M
3300005337\|Ga0070682_100020427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3895	Open in IMG/M
3300005354\|Ga0070675_100592778	All Organisms → cellular organisms → Bacteria → Proteobacteria	1005	Open in IMG/M
3300005366\|Ga0070659_101032055	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300005434\|Ga0070709_10280010	Not Available	1212	Open in IMG/M
3300005438\|Ga0070701_10161995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1296	Open in IMG/M
3300005441\|Ga0070700_101701853	Not Available	541	Open in IMG/M
3300005466\|Ga0070685_10049900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2415	Open in IMG/M
3300005518\|Ga0070699_101373689	Not Available	648	Open in IMG/M
3300005535\|Ga0070684_101144327	Not Available	732	Open in IMG/M
3300005548\|Ga0070665_101684199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300005564\|Ga0070664_100038371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4031	Open in IMG/M
3300005616\|Ga0068852_101319296	All Organisms → cellular organisms → Bacteria → Proteobacteria	743	Open in IMG/M
3300005764\|Ga0066903_100605486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1900	Open in IMG/M
3300005764\|Ga0066903_101410467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1309	Open in IMG/M
3300005764\|Ga0066903_103419500	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005844\|Ga0068862_100370691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1333	Open in IMG/M
3300006041\|Ga0075023_100447184	Not Available	570	Open in IMG/M
3300006579\|Ga0074054_11891614	Not Available	1006	Open in IMG/M
3300006606\|Ga0074062_12038647	Not Available	1097	Open in IMG/M
3300006871\|Ga0075434_100311564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1594	Open in IMG/M
3300006954\|Ga0079219_10020782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2427	Open in IMG/M
3300009011\|Ga0105251_10040025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2287	Open in IMG/M
3300009036\|Ga0105244_10352508	Not Available	678	Open in IMG/M
3300009092\|Ga0105250_10031178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	2141	Open in IMG/M
3300009174\|Ga0105241_11702324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	613	Open in IMG/M
3300009553\|Ga0105249_11108198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	862	Open in IMG/M
3300010043\|Ga0126380_10001281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9433	Open in IMG/M
3300010043\|Ga0126380_10123371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1605	Open in IMG/M
3300010047\|Ga0126382_11758434	Not Available	581	Open in IMG/M
3300010358\|Ga0126370_10003497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7640	Open in IMG/M
3300010359\|Ga0126376_10050906	All Organisms → cellular organisms → Bacteria → Proteobacteria	2929	Open in IMG/M
3300010359\|Ga0126376_12779081	Not Available	539	Open in IMG/M
3300010360\|Ga0126372_10859582	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300010361\|Ga0126378_11937556	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300010373\|Ga0134128_10273805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1892	Open in IMG/M
3300010375\|Ga0105239_10302784	Not Available	1800	Open in IMG/M
3300010376\|Ga0126381_100650587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1504	Open in IMG/M
3300010396\|Ga0134126_10733569	Not Available	1121	Open in IMG/M
3300012474\|Ga0157356_1014568	Not Available	583	Open in IMG/M
3300012476\|Ga0157344_1002235	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300012488\|Ga0157343_1006571	Not Available	788	Open in IMG/M
3300012492\|Ga0157335_1008133	Not Available	798	Open in IMG/M
3300012496\|Ga0157353_1012982	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
3300012519\|Ga0157352_1045142	Not Available	638	Open in IMG/M
3300012948\|Ga0126375_11075517	Not Available	661	Open in IMG/M
3300012955\|Ga0164298_10963409	Not Available	627	Open in IMG/M
3300012958\|Ga0164299_10539887	Not Available	784	Open in IMG/M
3300012984\|Ga0164309_10056177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2306	Open in IMG/M
3300012987\|Ga0164307_11287470	Not Available	610	Open in IMG/M
3300013306\|Ga0163162_10521138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1318	Open in IMG/M
3300013306\|Ga0163162_10880996	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300013307\|Ga0157372_11437625	Not Available	795	Open in IMG/M
3300014325\|Ga0163163_10095248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2996	Open in IMG/M
3300014968\|Ga0157379_11869482	Not Available	591	Open in IMG/M
3300015373\|Ga0132257_102729903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	643	Open in IMG/M
3300015374\|Ga0132255_104658093	Not Available	581	Open in IMG/M
3300017792\|Ga0163161_10800696	All Organisms → cellular organisms → Bacteria → Proteobacteria	792	Open in IMG/M
3300017947\|Ga0187785_10004342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4653	Open in IMG/M
3300017947\|Ga0187785_10006497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3884	Open in IMG/M
3300020078\|Ga0206352_10711823	Not Available	569	Open in IMG/M
3300021560\|Ga0126371_10151879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS113	2378	Open in IMG/M
3300021560\|Ga0126371_12188669	Not Available	667	Open in IMG/M
3300022530\|Ga0242658_1116508	Not Available	657	Open in IMG/M
3300022533\|Ga0242662_10234913	Not Available	589	Open in IMG/M
3300025900\|Ga0207710_10570908	Not Available	590	Open in IMG/M
3300025907\|Ga0207645_10014247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5326	Open in IMG/M
3300025926\|Ga0207659_10683069	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300025933\|Ga0207706_10081660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2841	Open in IMG/M
3300025934\|Ga0207686_10056767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2462	Open in IMG/M
3300025934\|Ga0207686_11462946	Not Available	563	Open in IMG/M
3300025937\|Ga0207669_10231694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1363	Open in IMG/M
3300025940\|Ga0207691_10374288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1216	Open in IMG/M
3300025944\|Ga0207661_10047173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3419	Open in IMG/M
3300025944\|Ga0207661_12134308	Not Available	506	Open in IMG/M
3300025945\|Ga0207679_10227626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1572	Open in IMG/M
3300025960\|Ga0207651_10922184	Not Available	778	Open in IMG/M
3300025961\|Ga0207712_10257344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1414	Open in IMG/M
3300026041\|Ga0207639_11864360	Not Available	562	Open in IMG/M
3300026118\|Ga0207675_101261163	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300026121\|Ga0207683_10027632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4902	Open in IMG/M
3300026802\|Ga0207511_104602	Not Available	650	Open in IMG/M
3300026870\|Ga0208762_1006797	Not Available	512	Open in IMG/M
3300027775\|Ga0209177_10165166	Not Available	762	Open in IMG/M
3300027910\|Ga0209583_10538276	Not Available	584	Open in IMG/M
3300028380\|Ga0268265_10637616	All Organisms → cellular organisms → Bacteria → Proteobacteria	1023	Open in IMG/M
3300028711\|Ga0307293_10061012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1179	Open in IMG/M
3300028718\|Ga0307307_10163397	Not Available	698	Open in IMG/M
3300028807\|Ga0307305_10004739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5760	Open in IMG/M
3300028814\|Ga0307302_10434369	Not Available	650	Open in IMG/M
3300028878\|Ga0307278_10317998	Not Available	687	Open in IMG/M
3300030903\|Ga0308206_1204255	Not Available	502	Open in IMG/M
3300031543\|Ga0318516_10007683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5054	Open in IMG/M
3300031680\|Ga0318574_10258815	Not Available	1007	Open in IMG/M
3300031751\|Ga0318494_10441387	Not Available	757	Open in IMG/M
3300031771\|Ga0318546_11289550	Not Available	513	Open in IMG/M
3300031782\|Ga0318552_10485223	Not Available	631	Open in IMG/M
3300031943\|Ga0310885_10097823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1326	Open in IMG/M
3300032042\|Ga0318545_10048081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1439	Open in IMG/M
3300032055\|Ga0318575_10047563	Not Available	1956	Open in IMG/M
3300034661\|Ga0314782_216999	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.67%
Host-Associated	Host-Associated	37.50%
Engineered	Engineered	0.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.00%
Plants	Host-Associated → Plants	34.17%
Human	Host-Associated → Human	3.33%
Aquatic	Environmental → Aquatic	1.67%
Solid Waste	Engineered → Solid Waste	0.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.67%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.67%
Digestive System	Host-Associated → Human → Digestive System	3.33%
Sediment	Environmental → Aquatic → Sediment	1.67%
Roots	Host-Associated → Plants → Roots	0.83%
Grass	Engineered → Solid Waste → Grass	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.33%
Loam	Environmental → Terrestrial → Soil → Loam	15.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.83%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.17%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.67%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.83%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.83%
Composting	Engineered → Solid Waste → Grass → Composting	0.83%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.67%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.33%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	3.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.67%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.83%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.83%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.83%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.67%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.33%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	3.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.33%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.50%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.67%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.67%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.67%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.67%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.67%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.83%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.83%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.83%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.83%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.83%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.83%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.83%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.83%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012474	Unplanted soil (control) microbial communities from North Carolina - M.Soil.3.yng.040610	Environmental	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012492	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610	Host-Associated	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026802	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-C (SPAdes)	Environmental	Open in IMG/M
3300026870	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0181.00005230	2162886013	Switchgrass Rhizosphere	MFRPLLIASLATLAIVGGVALFAEPGAEVRANTPVTKNDRPEIQLATQECTQHTWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASSNGK
INPgaii200_03369621	2228664022	Soil	QGVFMFRPLLIASLATVVIVGSIALLAAPGAEVRANTPATKNDRPEIQLATQACTQHTWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASSNGK
ARSoilOldRDRAFT_0167001	3300000044	Arabidopsis Rhizosphere	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
NODE_07174988	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MFRPLLIASTAIVAIVGGVVILAAPSAEVRANTPTAKSDQPEIQLAADECSQHAWPYYPGNCIRDHRRSSGKASDVRVVFASQLPNVASSNEK*
INPhiseqgaiiFebDRAFT_1014642002	3300000364	Soil	MFRPLLIASLATVVIVGSIALLAAPGAEVRANTPATKNDRPEIQLATQACTQHTWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASSNGK*
AF_2010_repII_A001DRAFT_100936132	3300000793	Forest Soil	LATVAIVGGVAILAGPGAEVRANTPATKSDRPEIQLVTRECAQHAWPYYPGNCIRDXRRSSGKASDVRVVFASQLPNAASSNGK*
Ga0062595_1002773801	3300004479	Soil	MFRPLLIASLATLAIVGGVALFAEPGAEVRANTPVTKNDRPEIQLATQECTQHTWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0066395_100112475	3300004633	Tropical Forest Soil	MFRPLLIASLATVAIVGGVAILAGPGAEVRANTPATKSDRPEIQLVTRECAQHAWPYYPGNCIRDHRRSSGKASDVRVVFASQLPNAASSNGK*
Ga0066395_102674781	3300004633	Tropical Forest Soil	MFRPLLIASLATVAFVGGFALLAAPGAEVRANTPATKNDRPEIQLATQECAQHAWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASNNGK*
Ga0058858_11611971	3300004785	Host-Associated	PLLVASLATVAIIGGVAFLAVPGAEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0058859_117752151	3300004798	Host-Associated	QNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0058861_116935822	3300004800	Host-Associated	QNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0058860_100004841	3300004801	Host-Associated	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0066814_100420922	3300005162	Soil	ANLGFLQQKAELLQGVFMFRPLLIASLAVATVGGVALLAAPSAEVRANTPATKNDRPETQLVTRECAQHAWPYYPGDCIRDHRRSSGKASDVRVFFASQLPDAALSNRK*
Ga0066823_100047112	3300005163	Soil	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0070676_100444153	3300005328	Miscanthus Rhizosphere	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0070683_1000750141	3300005329	Corn Rhizosphere	MFRPLLVASLTTVAIVGGVTVLAAPGTEVRANTPSTKSDRPEIQLAAHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNVASSNGK*
Ga0066388_1000651161	3300005332	Tropical Forest Soil	MFRPLLVASLATIAIVGGVALLAGPGAEVRANTPATKNDRTEIQLATQECAQHTWPYYPGDCIRDHRHSSGKASDVRVVFASQMPNAASSNGK*
Ga0066388_1010720432	3300005332	Tropical Forest Soil	MFRPLLIASLATVAIVGGVAILAGSGAEVRANTPATKNDRPEIQLATQECAHHTWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0066388_1045465712	3300005332	Tropical Forest Soil	MFRPLLVASLATVAIVGGVALLAAPGAEVRANTPSTKSDRPEIQLVTQECSQHAWPYYPGDCIRDQRRSSGKASDVRVVFANQMPNAALSNRK*
Ga0070682_1000204275	3300005337	Corn Rhizosphere	QNSLQGVFMFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNVASSNGK*
Ga0070675_1005927782	3300005354	Miscanthus Rhizosphere	MFRPLLVASLTTVAIVGGVTVLAAPGTEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0070659_1010320552	3300005366	Corn Rhizosphere	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSN
Ga0070709_102800101	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VFMFRPLLIASLATLAIVGGVALFAEPGAEVRANTPVTKNDRPEIQLATQECTQHTWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0070701_101619952	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0070700_1017018531	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPLLVASLTTVAIVGGVTVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNVASSNGK*
Ga0070685_100499004	3300005466	Switchgrass Rhizosphere	LLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0070699_1013736891	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0070684_1011443271	3300005535	Corn Rhizosphere	QNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0070665_1016841992	3300005548	Switchgrass Rhizosphere	QNSLQGVFMFRPLLIASLATLAIVGGVALFAEPGAEVRANTPVTKNDRPEIQLATQECTQHTWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0070664_1000383713	3300005564	Corn Rhizosphere	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNVASSNGK*
Ga0068852_1013192962	3300005616	Corn Rhizosphere	FMFRPLLVASLTTVAIVGGVTVLAAPGTEVRANTPSTKSDRPEIQLAAHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0066903_1006054861	3300005764	Tropical Forest Soil	MFRPLLIASTAIVAIVGGVAILAAPSAEVRANTPTAKSDQPEIQLAADECSQHAWPYYPGNCIRDHRRSSGKASDVRVVFASQLPNVASSNGK*
Ga0066903_1014104672	3300005764	Tropical Forest Soil	MFRPLLIVSTAIVAIVGGVAISAAPNAEVRANTPTTNSDRPEIRLATHECAQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQLPNVASSNGK*
Ga0066903_1034195001	3300005764	Tropical Forest Soil	MFRPLLIASTAIVAIVGGVAILAAPRAEVRANTPTTKSDRPEIQLATHECAQHAWPYYPGDCIRDHRRSSGKASDVRVVF
Ga0068862_1003706913	3300005844	Switchgrass Rhizosphere	MFRPLLVASLATLAIIGGVAFLAVPGAEVRANTPSMKSERPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0075023_1004471842	3300006041	Watersheds	MFRPLLIASLAVVATVGGVALLAAPSAEVRANTPSTKNDRPETQLVTRECAQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQLPDAALSNRK*
Ga0074054_118916141	3300006579	Soil	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSAGKASDVRVVFASQMSNVASSNGK*
Ga0074062_120386472	3300006606	Soil	LQQKKQNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0075434_1003115642	3300006871	Populus Rhizosphere	MFRPLLVASLTTVAIVGGVTVLAAPGTEVRANTPSTKSDRPEIQLAAHECSQHAWPYYPGDCIRYHRRSSGKASDVRVVFASQMPNVASSNGK*
Ga0079219_100207824	3300006954	Agricultural Soil	MFRPLLVASLTTVAIVGGVAVLAAPGTEVRANTPSTKSDRPETQLVTHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0105251_100400254	3300009011	Switchgrass Rhizosphere	VAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0105244_103525081	3300009036	Miscanthus Rhizosphere	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSTKSERPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0105250_100311782	3300009092	Switchgrass Rhizosphere	LQQKKQNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0105241_117023241	3300009174	Corn Rhizosphere	TVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0105249_111081981	3300009553	Switchgrass Rhizosphere	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQM
Ga0126380_100012816	3300010043	Tropical Forest Soil	MFRPLLIASLATVAFVGGFALLAAPGAEVRANTPATKNDRREIQLATQECAQHAWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASNNGK*
Ga0126380_101233711	3300010043	Tropical Forest Soil	MFRPLLIASTAIVAIVGGVAILAAPSAEVRANTPTAKSDQPEIQLAADECSQHAWPYYPGNCIRDHRRSSGKASDVRVVFASQLPNVASSNEK*
Ga0126382_117584341	3300010047	Tropical Forest Soil	MFRPLLIASLASVAIVSGVALLVAPSAEVRANTPTTKSDRSDIQLVTHECAQHAWPYYPADCIRDHRRSSGKASDVRVVVASQSPNAASTS
Ga0126370_100034977	3300010358	Tropical Forest Soil	MFRPLLIASLATVAFVGGFALLAAPGAEVRANTPATKNDRPEIQLSTQECAQHAWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASNNGK*
Ga0126376_100509065	3300010359	Tropical Forest Soil	MFRPLLIASLATVAFVGGFALLAAPGAEVRANTPATKNDRPEIQLATQECAQHAWPYYPGDCIRCQRRSSGKASDVRVVFASQMPNAASNNGK*
Ga0126376_127790812	3300010359	Tropical Forest Soil	MFRPLLIASLATVAIVGGVAILAGSGAEVRANTPATKNDRPEIQLATQECAHHTWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNA
Ga0126372_108595822	3300010360	Tropical Forest Soil	MFRPLLIASLATVAIVGGVAILAGPGAEVRANTLATKSDRPEIQLVTRECAQHAWPYYPGNCIRDHRRSSGTASDVRVVFASQLPNVASSNGK*
Ga0126378_119375561	3300010361	Tropical Forest Soil	MFRPLLIASLATVAIVGGVAILAGPGAEVRANTPATKSDRPEIQLVTRECAQHAWPYYPGDCIRDHRRSSGKASDV
Ga0134128_102738052	3300010373	Terrestrial Soil	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0105239_103027842	3300010375	Corn Rhizosphere	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0126381_1006505872	3300010376	Tropical Forest Soil	MFRPLLIASLATVAIVGGVAIFAGPGAEVRANTPATKSDRPEIQLVTRECAQHAWPYYPGNCIRDHRRSSGKASDVRVVFASQLPNAASSNGK*
Ga0134126_107335692	3300010396	Terrestrial Soil	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPEIQLAAHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0157356_10145681	3300012474	Unplanted Soil	MFRPLLVASLTTVAIVGGVAVLAAPGTEVRANTPSTKSDRPEIQLAAHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0157344_10022352	3300012476	Arabidopsis Rhizosphere	MFRPLLVASLTTVAIVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0157343_10065711	3300012488	Arabidopsis Rhizosphere	MFRPLLVASLATVAIIGGVAFLTVPGAEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0157335_10081331	3300012492	Arabidopsis Rhizosphere	MFRPVLVASLATVAIIGGVAFLAVPGAEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0157353_10129822	3300012496	Unplanted Soil	LVASLATVAIIGGVAFLAVPGAEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0157352_10451421	3300012519	Unplanted Soil	GVFMFRPLLVASLTTVAIVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNVASSNGK*
Ga0126375_110755171	3300012948	Tropical Forest Soil	MFRPLLVASLATIAIVGGVALLAGPGAEVRANTPAAKSDQPEIQLAADECSQHAWPYYPGNCIRDHRRSSGKASDVRVVFASQLPNAASSNGK*
Ga0164298_109634091	3300012955	Soil	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSMKSDRPELQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0164299_105398872	3300012958	Soil	LQQKKQNSLQGVFMFRPLLVASLATVAIVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0164309_100561772	3300012984	Soil	LQQKKQNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0164307_112874702	3300012987	Soil	RPLLVASLATVAIVGGVAVLAAPGTEVRANTPSTKSDRPEIQLATQECTQHTWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0163162_105211381	3300013306	Switchgrass Rhizosphere	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAAS
Ga0163162_108809962	3300013306	Switchgrass Rhizosphere	MFRPLLVASLTTVAIVGGVTVLAAPGTEVRANTPSTKSDRPEIQLAAHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0157372_114376251	3300013307	Corn Rhizosphere	MFRPLLVASLATVAIVGGVAVLAAPGTEVRANTPSTKSDRPEIQLAAHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK*
Ga0163163_100952481	3300014325	Switchgrass Rhizosphere	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPN
Ga0157379_118694821	3300014968	Switchgrass Rhizosphere	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVAS
Ga0132257_1027299032	3300015373	Arabidopsis Rhizosphere	LQGVFMFRPLLIASLATLAIVGGVALFAEPGAEVRANTPVTKNDRPEIKLATQECTQHTWPYYPGDCIRDQRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0132255_1046580931	3300015374	Arabidopsis Rhizosphere	MFRPLLVASLTTVAIVGGVTVLAAPGTEVRANTPSTKSDRPEIQLAAHECSQLAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK*
Ga0163161_108006961	3300017792	Switchgrass Rhizosphere	QNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Ga0187785_100043422	3300017947	Tropical Peatland	MFRPLLIASTAIVAIVGGGAILAAPSVEVRANTPTTKSDRPEIQLATHECAQHAWPYYPGDCIRDYRRSSGKASDVRVVFASQLPNVASSNGK
Ga0187785_100064974	3300017947	Tropical Peatland	MFRPLLVASLATVAIVGGVALLAAPGAEVRANTPSTKSDRPEIQLATQECSQHAWPYYPGDCIRDQRRSSGKASDVRVVFANQMPNAALSNRK
Ga0206352_107118232	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	QNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK
Ga0126371_101518793	3300021560	Tropical Forest Soil	MFRPLLIASLATVAIVGGVAILAGPGAEVRANTLATKSDRPEIQLVTRECAQHAWPYYPGNCIRDHRRSSGKASDVRVVFASQLPNAASSNGK
Ga0126371_121886692	3300021560	Tropical Forest Soil	MFRPLLIASTAIVAIVGGVAILAAPSAEVRANTPTAKSDQPEIQLAADECSQHAWPYYPGNCIRDHRRSSGKASDVRVVFASQLPNVASSNGK
Ga0242658_11165082	3300022530	Soil	SLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK
Ga0242662_102349131	3300022533	Soil	SLQGVFMFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSMKSDRPELQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Ga0207710_105709081	3300025900	Switchgrass Rhizosphere	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Ga0207645_100142475	3300025907	Miscanthus Rhizosphere	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Ga0207659_106830692	3300025926	Miscanthus Rhizosphere	MFRPLLVASLTTVAIVGGVTVLAAPGTEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK
Ga0207706_100816605	3300025933	Corn Rhizosphere	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Ga0207686_100567674	3300025934	Miscanthus Rhizosphere	FMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK
Ga0207686_114629461	3300025934	Miscanthus Rhizosphere	MFRPLLIASLATLAIVGGVALFAEPGAEVRANTPVTKNDRPEIQLATQECTQHTWPYYPGDCIRDQRRSSGKASDVRVV
Ga0207669_102316942	3300025937	Miscanthus Rhizosphere	MFRPLLVASLATVAIVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Ga0207691_103742883	3300025940	Miscanthus Rhizosphere	GVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK
Ga0207661_100471731	3300025944	Corn Rhizosphere	MFRPLLVASLTTVAIVGGVTVLAAPGTEVRANTPSTKSDRPEIQLAAHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNVASSNGK
Ga0207661_121343081	3300025944	Corn Rhizosphere	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANSPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSN
Ga0207679_102276262	3300025945	Corn Rhizosphere	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNVASSNGK
Ga0207651_109221841	3300025960	Switchgrass Rhizosphere	QKKQNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK
Ga0207712_102573442	3300025961	Switchgrass Rhizosphere	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Ga0207639_118643602	3300026041	Corn Rhizosphere	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK
Ga0207675_1012611631	3300026118	Switchgrass Rhizosphere	ATVAIIGGVAFLAVPGAEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK
Ga0207683_100276321	3300026121	Miscanthus Rhizosphere	LATVAIIGGVAFLAVPGAEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Ga0207511_1046021	3300026802	Soil	MFRPLLVASLATGAIIGGVAFLAVPGAEVRANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Ga0208762_10067971	3300026870	Soil	LQQKKQNSLQGVFMFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLATHECSQHAWPYYPGDCIRDRRRSSGKASDVRVVFASQMSNVASSNGK
Ga0209177_101651661	3300027775	Agricultural Soil	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPETQLVTHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK
Ga0209583_105382762	3300027910	Watersheds	MFRPLLIASLAVVATVGGVALLAAPSAEVRANTPSTKNDRPETQLVTRECAQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQLPDAALSNRK
Ga0268265_106376161	3300028380	Switchgrass Rhizosphere	MFRPLLVASLATVAFVGGVAVLAAPGTEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMSNVASSNGK
Ga0307293_100610122	3300028711	Soil	MIRALLIASLAAPTTVGGVALLTTPSAEVKASTPSATRDRPELQITTHECAQHAWPYYPGVCIRDHRRSSGKASDVRVVFASQLPNAAISNTK
Ga0307307_101633971	3300028718	Soil	MIRALLIASLAAPTTVGGVALLTTPSAEVKASTPSATRDRPEIQITTHECAQHAWPYYPGVCIRDHRRSSGKASDVRVVFASQLPNAAISNTK
Ga0307305_100047395	3300028807	Soil	MIRTLLIASLAAPTTVGGVALLTTPSAEVKASTPSATRDRPEIQITTHECAQHAWPYYPGVCIRDHRRSSGKASDVRVVFASQLPNAAISNTK
Ga0307302_104343691	3300028814	Soil	MIRTLLIASLAAPTTVGGVALLTTPSAEVKASTPSATRDRPELQITTHECAQHAWPYYPGVCIRDHRRSSGKASDVRVVFASQLPNAAISNTK
Ga0307278_103179981	3300028878	Soil	RCRELSMIRTLLIASLAAPTTVGGVALLTTPSAEVKASTPSATRDRPEIQITTHECAQHAWPYYPGVCIRDHRRSSGKASDVRVVFASQLPNAAISNTK
Ga0308206_12042551	3300030903	Soil	LLIASLAAPTTVGGVALLTTPSAEVKASTPSATRDRPEIQITTHECAQHAWPYYPGVCIRDHRRSSGKASDVRVVFASQLPNAAISNTK
Ga0318516_100076833	3300031543	Soil	MFRPLLIASLATVAIVGGVAILAGPGAEVRANTPATKSDRPEIQLVTRECAQHAWPYYPGNCIRDHRHSSGKASDVRVVFASQLPNAASSNGK
Ga0318574_102588152	3300031680	Soil	LIASLATVAIVGGVAILAGPGAEVRANTPATKSDRPEIQLVTRECAQHAWPYYPGNCIRDHRHSSGKASDVRVVFASQLPNAASSNGK
Ga0318494_104413871	3300031751	Soil	LRGVFMFRPLLIASLATVAIVGGVAILAGPGAEVRANTPATKSDRPEIQLVTRECAQHAWPYYPGNCIRDHRHSSGKASDVRVVFASQLPNAASSNGK
Ga0318546_112895501	3300031771	Soil	MFRPLIIASLATVAIVGGVAILAGPGAELRAKTPAAKSDRPEIQLVTRECAQHAWPYYPGNCIRDHRRSSGKASDVRV
Ga0318552_104852231	3300031782	Soil	MFRPLLIASLATVAIVGGVAILAGPGAEVRANTPATTSDRPEIQLVTRECAQHAWPYYPGNCIRDHRHSSGKASDVRVVFASQLPNAASSNGK
Ga0310885_100978231	3300031943	Soil	MFRPLLVASLATVAIIGGVAFLAVPGAEVRANTPSTKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVR
Ga0318545_100480811	3300032042	Soil	MFRPLLIASLATVAIVGGVAILAGPGAEVRANTPATKSDRPEIQLVTRECAQHAWPYYPGNCIRDHRHSSGKASDVRVVFA
Ga0318575_100475634	3300032055	Soil	MFRPLLIASLATVAIVGGVAILAGPGAEFRANTPATKSDRPEIQLVTRECAQHAWPYYPGNCIRDHRHSSGKASDVRVVFASQLPNAASSNGK
Ga0314782_216999_24_305	3300034661	Soil	MFRPLLVASLATVAIIGGVAFLAVPGAEARANTPSMKSDRPEIQLATHECSQHAWPYYPGDCIRDHRRSSGKASDVRVVFASQMPNAASSNGK

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F073511

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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