Metagenome / Metatranscriptome Family F054018

Basic Information
Family ID	F054018
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	64 residues
Representative Sequence	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Number of Associated Samples	115
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	54.29 %
% of genes near scaffold ends (potentially truncated)	51.43 %
% of genes from short scaffolds (< 2000 bps)	82.14 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (62.857 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (32.857 % of family members)
Environment Ontology (ENVO)	Unclassified (38.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.429 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 26.56% β-sheet: 10.94% Coil/Unstructured: 62.50%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF13191	AAA_16	4.32
PF03401	TctC	3.60
PF00536	SAM_1	2.88
PF04392	ABC_sub_bind	2.16
PF00589	Phage_integrase	1.44
PF05598	DUF772	1.44
PF02556	SecB	0.72
PF01966	HD	0.72
PF12697	Abhydrolase_6	0.72
PF00196	GerE	0.72
PF02743	dCache_1	0.72
PF13358	DDE_3	0.72
PF00999	Na_H_Exchanger	0.72
PF13602	ADH_zinc_N_2	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.60
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.16
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.72
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.72
COG1952	Preprotein translocase subunit SecB	Intracellular trafficking, secretion, and vesicular transport [U]	0.72
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.72
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.72
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.72
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.86 %
All Organisms	root	All Organisms	37.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.86 %
cellular organisms	root	All Organisms → cellular organisms	37.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.86 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	22.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.71 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.00 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.86 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.71 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.57 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.86 %
Aquibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.86 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.86 %
Aquibium carbonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.86 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.86 %
Bradyrhizobium sp. URHA0002	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHA0002	1.43 %
Bradyrhizobium sp. BRP22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	0.71 %
Bradyrhizobium sp. Leo170	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	0.71 %
Aquibium carbonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102GFKB5	Not Available	508	Open in IMG/M
2170459005\|F1BAP7Q01DQ9A7	Not Available	519	Open in IMG/M
3300000955\|JGI1027J12803_103000096	Not Available	602	Open in IMG/M
3300001686\|C688J18823_10239639	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300002568\|C688J35102_120703891	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300003544\|Ga0007417J51691_1042736	Not Available	662	Open in IMG/M
3300003572\|Ga0007424J51698_1005760	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300004798\|Ga0058859_10081858	Not Available	503	Open in IMG/M
3300004800\|Ga0058861_10067962	Not Available	518	Open in IMG/M
3300004801\|Ga0058860_12157558	Not Available	680	Open in IMG/M
3300005147\|Ga0066821_1001482	Not Available	1166	Open in IMG/M
3300005148\|Ga0066819_1002527	Not Available	977	Open in IMG/M
3300005160\|Ga0066820_1004461	Not Available	775	Open in IMG/M
3300005163\|Ga0066823_10015134	Not Available	1138	Open in IMG/M
3300005164\|Ga0066815_10008385	Not Available	1222	Open in IMG/M
3300005344\|Ga0070661_100294135	Not Available	1263	Open in IMG/M
3300005354\|Ga0070675_100027705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4555	Open in IMG/M
3300005441\|Ga0070700_100040113	All Organisms → cellular organisms → Bacteria	2864	Open in IMG/M
3300005548\|Ga0070665_100263618	All Organisms → cellular organisms → Bacteria	1724	Open in IMG/M
3300005548\|Ga0070665_100909739	Not Available	892	Open in IMG/M
3300005614\|Ga0068856_100137587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHA0002	2448	Open in IMG/M
3300005614\|Ga0068856_101084222	Not Available	818	Open in IMG/M
3300005840\|Ga0068870_10006058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHA0002	5313	Open in IMG/M
3300005843\|Ga0068860_100091531	All Organisms → cellular organisms → Bacteria	2897	Open in IMG/M
3300005843\|Ga0068860_100796966	Not Available	958	Open in IMG/M
3300006038\|Ga0075365_10057802	All Organisms → cellular organisms → Bacteria	2581	Open in IMG/M
3300006038\|Ga0075365_10248786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1249	Open in IMG/M
3300006038\|Ga0075365_10323758	Not Available	1086	Open in IMG/M
3300006038\|Ga0075365_11283846	Not Available	515	Open in IMG/M
3300006041\|Ga0075023_100337751	Not Available	633	Open in IMG/M
3300006050\|Ga0075028_100469351	Not Available	730	Open in IMG/M
3300006572\|Ga0074051_11713498	Not Available	561	Open in IMG/M
3300006931\|Ga0097620_100263616	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300009092\|Ga0105250_10025634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2375	Open in IMG/M
3300009098\|Ga0105245_10076848	All Organisms → cellular organisms → Bacteria → Proteobacteria	3042	Open in IMG/M
3300009101\|Ga0105247_10048899	All Organisms → cellular organisms → Bacteria	2598	Open in IMG/M
3300009177\|Ga0105248_10148831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2641	Open in IMG/M
3300012203\|Ga0137399_11016436	Not Available	698	Open in IMG/M
3300012212\|Ga0150985_112976422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1151	Open in IMG/M
3300012469\|Ga0150984_101164577	Not Available	680	Open in IMG/M
3300012469\|Ga0150984_115042503	Not Available	857	Open in IMG/M
3300012469\|Ga0150984_116062291	Not Available	625	Open in IMG/M
3300012469\|Ga0150984_122533596	Not Available	825	Open in IMG/M
3300012683\|Ga0137398_10856890	Not Available	634	Open in IMG/M
3300012685\|Ga0137397_10368263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300012882\|Ga0157304_1066200	Not Available	591	Open in IMG/M
3300012916\|Ga0157310_10385477	Not Available	578	Open in IMG/M
3300012924\|Ga0137413_11722092	Not Available	516	Open in IMG/M
3300012925\|Ga0137419_11370928	Not Available	596	Open in IMG/M
3300012937\|Ga0162653_100022659	Not Available	858	Open in IMG/M
3300012957\|Ga0164303_10021942	All Organisms → cellular organisms → Bacteria	2478	Open in IMG/M
3300012957\|Ga0164303_10101000	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300012957\|Ga0164303_10202806	Not Available	1099	Open in IMG/M
3300012984\|Ga0164309_10101185	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300012987\|Ga0164307_10004163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170	6672	Open in IMG/M
3300013100\|Ga0157373_11058628	Not Available	607	Open in IMG/M
3300014325\|Ga0163163_10443446	Not Available	1358	Open in IMG/M
3300015200\|Ga0173480_10544284	Not Available	703	Open in IMG/M
3300015371\|Ga0132258_11944904	Not Available	1480	Open in IMG/M
3300015372\|Ga0132256_102312764	Not Available	641	Open in IMG/M
3300015373\|Ga0132257_102142984	Not Available	723	Open in IMG/M
3300015373\|Ga0132257_103178297	Not Available	598	Open in IMG/M
3300015374\|Ga0132255_101766965	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300017792\|Ga0163161_10319919	Not Available	1226	Open in IMG/M
3300018027\|Ga0184605_10008170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3910	Open in IMG/M
3300018027\|Ga0184605_10129719	Not Available	1126	Open in IMG/M
3300018027\|Ga0184605_10488882	Not Available	537	Open in IMG/M
3300018028\|Ga0184608_10033298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Aquibium → Aquibium carbonis	1952	Open in IMG/M
3300018028\|Ga0184608_10060545	Not Available	1514	Open in IMG/M
3300018031\|Ga0184634_10089499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1332	Open in IMG/M
3300018055\|Ga0184616_10255359	Not Available	665	Open in IMG/M
3300018067\|Ga0184611_1080946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BRP22	1114	Open in IMG/M
3300018071\|Ga0184618_10491261	Not Available	515	Open in IMG/M
3300018072\|Ga0184635_10389257	Not Available	529	Open in IMG/M
3300018073\|Ga0184624_10308142	Not Available	709	Open in IMG/M
3300018073\|Ga0184624_10433157	Not Available	579	Open in IMG/M
3300018077\|Ga0184633_10561349	Not Available	544	Open in IMG/M
3300018465\|Ga0190269_11243051	Not Available	589	Open in IMG/M
3300018469\|Ga0190270_10163630	Not Available	1828	Open in IMG/M
3300018469\|Ga0190270_10245051	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300018469\|Ga0190270_12711980	Not Available	558	Open in IMG/M
3300018476\|Ga0190274_13875888	Not Available	507	Open in IMG/M
3300019279\|Ga0184642_1307686	Not Available	525	Open in IMG/M
3300019869\|Ga0193705_1081391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300019876\|Ga0193703_1000972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4081	Open in IMG/M
3300019883\|Ga0193725_1096654	Not Available	703	Open in IMG/M
3300019887\|Ga0193729_1159470	Not Available	807	Open in IMG/M
3300019890\|Ga0193728_1013620	Not Available	4084	Open in IMG/M
3300019890\|Ga0193728_1054014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1946	Open in IMG/M
3300020021\|Ga0193726_1161065	Not Available	971	Open in IMG/M
3300021363\|Ga0193699_10005291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4664	Open in IMG/M
3300021363\|Ga0193699_10018291	Not Available	2543	Open in IMG/M
3300021363\|Ga0193699_10022893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2293	Open in IMG/M
3300021415\|Ga0193694_1041333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300021418\|Ga0193695_1051633	Not Available	893	Open in IMG/M
3300025315\|Ga0207697_10349760	Not Available	656	Open in IMG/M
3300025315\|Ga0207697_10349760	Not Available	656	Open in IMG/M
3300025321\|Ga0207656_10558000	Not Available	584	Open in IMG/M
3300025908\|Ga0207643_10003065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8982	Open in IMG/M
3300025926\|Ga0207659_10053265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2886	Open in IMG/M
3300025928\|Ga0207700_10364869	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300025930\|Ga0207701_10099362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2611	Open in IMG/M
3300025935\|Ga0207709_10132681	All Organisms → cellular organisms → Bacteria	1700	Open in IMG/M
3300025937\|Ga0207669_11873133	Not Available	512	Open in IMG/M
3300025941\|Ga0207711_10208796	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300026557\|Ga0179587_10659365	Not Available	689	Open in IMG/M
3300026855\|Ga0208404_1004347	Not Available	581	Open in IMG/M
3300026870\|Ga0208762_1001302	Not Available	861	Open in IMG/M
3300027288\|Ga0208525_1010276	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300027560\|Ga0207981_1024637	Not Available	1089	Open in IMG/M
3300027915\|Ga0209069_10840009	Not Available	552	Open in IMG/M
3300028708\|Ga0307295_10006179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2787	Open in IMG/M
3300028714\|Ga0307309_10015948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1409	Open in IMG/M
3300028719\|Ga0307301_10032358	Not Available	1571	Open in IMG/M
3300028721\|Ga0307315_10290145	Not Available	518	Open in IMG/M
3300028771\|Ga0307320_10276049	Not Available	665	Open in IMG/M
3300028791\|Ga0307290_10256553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300028793\|Ga0307299_10416819	Not Available	503	Open in IMG/M
3300028796\|Ga0307287_10116186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1012	Open in IMG/M
3300028796\|Ga0307287_10291253	Not Available	617	Open in IMG/M
3300028807\|Ga0307305_10256006	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300028807\|Ga0307305_10478177	Not Available	559	Open in IMG/M
3300028824\|Ga0307310_10009703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3668	Open in IMG/M
3300028824\|Ga0307310_10706654	Not Available	517	Open in IMG/M
3300028828\|Ga0307312_10168007	Not Available	1398	Open in IMG/M
3300028875\|Ga0307289_10104362	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300028876\|Ga0307286_10004361	Not Available	4209	Open in IMG/M
3300028880\|Ga0307300_10023207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1650	Open in IMG/M
3300030777\|Ga0075402_12285288	Not Available	520	Open in IMG/M
3300030917\|Ga0075382_11770329	Not Available	519	Open in IMG/M
3300031093\|Ga0308197_10041179	Not Available	1146	Open in IMG/M
3300031097\|Ga0308188_1019143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	647	Open in IMG/M
3300031125\|Ga0308182_1004157	Not Available	971	Open in IMG/M
3300031200\|Ga0307496_10102750	Not Available	559	Open in IMG/M
3300031231\|Ga0170824_106746014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3398	Open in IMG/M
3300031446\|Ga0170820_16003349	Not Available	531	Open in IMG/M
3300031562\|Ga0310886_10419760	Not Available	793	Open in IMG/M
3300031740\|Ga0307468_100114888	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300032075\|Ga0310890_11179740	Not Available	623	Open in IMG/M
3300034354\|Ga0364943_0401244	Not Available	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.57%
Host-Associated	Host-Associated	31.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.43%
Plants	Host-Associated → Plants	29.29%
Aquatic	Environmental → Aquatic	12.14%
Human	Host-Associated → Human	2.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.86%
Sediment	Environmental → Aquatic → Sediment	11.43%
Roots	Host-Associated → Plants → Roots	3.57%
Digestive System	Host-Associated → Human → Digestive System	2.14%
Freshwater	Environmental → Aquatic → Freshwater	0.71%
Floodplain	Environmental → Terrestrial → Floodplain	0.71%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.00%
Loam	Environmental → Terrestrial → Soil → Loam	2.86%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.86%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.14%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.86%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.86%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.43%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	32.86%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.29%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.86%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.14%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.14%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.14%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.43%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.71%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003544	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003572	Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_40 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004801	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005160	Soil and rhizosphere microbial communities from Laval, Canada - mgLMB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021415	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026855	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA (SPAdes)	Environmental	Open in IMG/M
3300026870	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300030777	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031097	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_183 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031125	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_153 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_07452910	2170459002	Grass Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGGSLPSEYWSHPY
E41_03627790	2170459005	Grass Soil	MRTLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPVSPHAIMVKLGGSLPSEYWSHPY
JGI1027J12803_1030000961	3300000955	Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYGSHPY*
C688J18823_102396394	3300001686	Soil	KLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
C688J35102_1207038913	3300002568	Soil	MRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0007417J51691_10427361	3300003544	Avena Fatua Rhizosphere	DNPMRKLGIIGLAIVAATAFGVWSASTVAQSRVGKAHVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0007424J51698_10057601	3300003572	Avena Fatua Rhizosphere	WRDNPMRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0058859_100818581	3300004798	Host-Associated	EIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0058861_100679621	3300004800	Host-Associated	RDNPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0058860_121575581	3300004801	Host-Associated	DNPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0066821_10014821	3300005147	Soil	MRKLDIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0066819_10025273	3300005148	Soil	MRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0066820_10044611	3300005160	Soil	MRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGGSLPSEYWSHPY*
Ga0066823_100151343	3300005163	Soil	MRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0066815_100083852	3300005164	Soil	MRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0070661_1002941351	3300005344	Corn Rhizosphere	VRLITYHTGWRDNPMRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0070675_1000277058	3300005354	Miscanthus Rhizosphere	LITYHTGWRDNPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0070700_1000401131	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRKLEIIGLAFVAATAFGVWSASTVAQSRIGKADVLAASAPISPHAIMVKLGSS
Ga0070665_1002636185	3300005548	Switchgrass Rhizosphere	AGGGFCVRLITYHTGWRDNPMRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0070665_1009097393	3300005548	Switchgrass Rhizosphere	AGGGFCVRLITYHTGWRDNPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0068856_1001375878	3300005614	Corn Rhizosphere	FVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0068856_1010842224	3300005614	Corn Rhizosphere	FVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0068870_100060581	3300005840	Miscanthus Rhizosphere	IGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0068860_1000915315	3300005843	Switchgrass Rhizosphere	MRIIGLAIVAATAFGVWSASPAAQSRVGKADVLAASAPISPHVIMGISLPSEYWSHPLSD
Ga0068860_1007969661	3300005843	Switchgrass Rhizosphere	MRKLGIIGLAIVAATAFGVWSADTVANSNVAKAEVAAGPAAISPHAIMVSLGS
Ga0075365_100578021	3300006038	Populus Endosphere	MRKITLAGIAAVAAFGVAWSASTFAKSRVGKAEVVAASIAPHEIMVQLGRSLPSEYWSHPY*
Ga0075365_102487862	3300006038	Populus Endosphere	MRKLEIIGLAGIVAATAFGVWSADTVANSKVAKAEVVAASGPIAPHAIMVKLGRDLPSEYWSHPF*
Ga0075365_103237583	3300006038	Populus Endosphere	TMRKLEIIGLAGIVAATAFGVWSADTVTNSRVAKAEVVAASAPIAPHAIMVKLGRALPSEYWSHPY*
Ga0075365_112838461	3300006038	Populus Endosphere	IIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0075023_1003377512	3300006041	Watersheds	MGIIGLAIIAATAFGVWSASTVVQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY*
Ga0075028_1004693511	3300006050	Watersheds	MGIIGLAIIAATAFGVWSASTVVQSRVGKADVHAASAPISPHVIMVKLGSSLPSEYWSHPY*
Ga0074051_117134982	3300006572	Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0097620_1002636163	3300006931	Switchgrass Rhizosphere	MRKLEIIGLAFVAATAFGVWSASTVAQSRIGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0105250_100256342	3300009092	Switchgrass Rhizosphere	MRKLEIIGLAFVAATALGVWSASTVAQSRIGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0105245_100768481	3300009098	Miscanthus Rhizosphere	MRKLGIIGLAIVAATAFGVWSASTAAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0105247_100488998	3300009101	Switchgrass Rhizosphere	MRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASASISPHAIMVKLGSSLPSEYWSHPY*
Ga0105248_101488317	3300009177	Switchgrass Rhizosphere	LAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0137399_110164361	3300012203	Vadose Zone Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGGSLPSEYWSHPY*
Ga0150985_1129764224	3300012212	Avena Fatua Rhizosphere	MRKFEIIGLAIVAATAFGVWSASTVAQSRGGKAYVLAASAPISPHVIMVKLGSSLPAEYWSHPY*
Ga0150984_1011645772	3300012469	Avena Fatua Rhizosphere	MRKLKIIGLAIVAATAFGVWSAATVAQSRGGKADVLAASAPISPHAIMVKLGGGLPSEYWSHPY*
Ga0150984_1150425032	3300012469	Avena Fatua Rhizosphere	ENPMRKLGIIGLAIVAATAFGIWSASTVAQSRVGKADVLAASAPISPPAVMVKLGGSRPSEYWSHPY*
Ga0150984_1160622911	3300012469	Avena Fatua Rhizosphere	RDNPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADGLAASAPISPHAIMVKLGGSLPSEYWSHPY*
Ga0150984_1225335963	3300012469	Avena Fatua Rhizosphere	DNPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKTDVLAASAPISPHVIMVKLGSSLPSEYWSHPY*
Ga0137398_108568901	3300012683	Vadose Zone Soil	MRKLEIIGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0137397_103682631	3300012685	Vadose Zone Soil	LEIIGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGGSLPSEYWSHPY*
Ga0157304_10662002	3300012882	Soil	HTGWRDNPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0157310_103854771	3300012916	Soil	LEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0137413_117220921	3300012924	Vadose Zone Soil	MRKLEIIGLAIVAATAFGVWSASTVAQTRVGKADVRAASAPISPHVIMVKLGGSLPSEYWSHPY*
Ga0137419_113709281	3300012925	Vadose Zone Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGGSLPSEYWSHPY*
Ga0162653_1000226592	3300012937	Soil	MRKLEIIGLAIVAATAFGLWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPH*
Ga0164303_100219427	3300012957	Soil	MRKLEIIGLAFVAATAFGVWSASTVAQSRIGKADVLAASAPISPHAIMVKPGSSLPSEYWSHPY*
Ga0164303_101010004	3300012957	Soil	RDNPMRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0164303_102028061	3300012957	Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKPGSSLPS
Ga0164309_101011855	3300012984	Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASASISPHAIMVKLGSSLPSEYWSHPY*
Ga0164307_100041631	3300012987	Soil	NPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0157373_110586281	3300013100	Corn Rhizosphere	NPMRKLGIIGLAIVAATAFGMWSASTVAQSRVGKVAVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0163163_104434464	3300014325	Switchgrass Rhizosphere	EIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY
Ga0173480_105442841	3300015200	Soil	NPMRKLEIIGLAFVAATAFGVWSASTVAQSRIGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY*
Ga0132258_119449041	3300015371	Arabidopsis Rhizosphere	VRLIIYHTGWRDNPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSVPSEYW*
Ga0132256_1023127641	3300015372	Arabidopsis Rhizosphere	MRKLGIIGLAIVAATAFGLWLASTAAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0132257_1021429841	3300015373	Arabidopsis Rhizosphere	MRKLEIIGSAIVAATAFGVWAASPVAQSKVGKADYVFAASAPISPPAITVKLGGSLPSEYWSHPY*
Ga0132257_1031782972	3300015373	Arabidopsis Rhizosphere	MRKLGIIGLAIVAATAFGVWSASTAAQSRVGKDVLAATAPISPHAIMVSLGSSLPSEYWSHPY*
Ga0132255_1017669651	3300015374	Arabidopsis Rhizosphere	MRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPPAITVKLGGSLPSEYWSHPY*
Ga0163161_103199191	3300017792	Switchgrass Rhizosphere	MRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGGSLPSEYWSHPY
Ga0184605_100081704	3300018027	Groundwater Sediment	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGGSLPSEYWSHPY
Ga0184605_101297193	3300018027	Groundwater Sediment	MRKLEIIGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY
Ga0184605_104888821	3300018027	Groundwater Sediment	IGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0184608_100332981	3300018028	Groundwater Sediment	NPMRKLEIIGFAIFAAISLGVWSSFTVVLLRGGKAHVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0184608_100605451	3300018028	Groundwater Sediment	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAILVKLGGSLPSEYWSHPY
Ga0184634_100894992	3300018031	Groundwater Sediment	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGRSLPSEYWSHPY
Ga0184616_102553591	3300018055	Groundwater Sediment	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY
Ga0184611_10809461	3300018067	Groundwater Sediment	LEIIGFAGIVVATAFGVWSADTVAQSRVGKADVLAASAPIAPHAIMVKLGRHLPSEYWSHPF
Ga0184618_104912611	3300018071	Groundwater Sediment	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0184635_103892571	3300018072	Groundwater Sediment	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGGSLP
Ga0184624_103081422	3300018073	Groundwater Sediment	MRKFEIIGLAIVAATAFGLWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLP
Ga0184624_104331571	3300018073	Groundwater Sediment	LEIIGLAVVAATAFGVWSADTVAQSRVGKADVLAASAPIAPHAIMVKLGRHLPSEYWSHP
Ga0184633_105613491	3300018077	Groundwater Sediment	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPH
Ga0190269_112430511	3300018465	Soil	MRKLEIIGLAIVAATGFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGGSLPSEYWSHPY
Ga0190270_101636301	3300018469	Soil	MRKLGIIGLAIVAATAFGVWSADTVANSKVAKPEVAAASAAISPHAIMVSLGSSLPSEYWSHPY
Ga0190270_102450514	3300018469	Soil	MRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY
Ga0190270_127119801	3300018469	Soil	RRFHTGWRDNPMRKLGIIGLAIVAATAFGMWSASTVARVGKADAASAPISPHAIMVSLGNSLPSEYWSHPY
Ga0190274_138758881	3300018476	Soil	MRKLEIIGLAFVAATAFGVWSASTVAQSRIGKADVLAASAAISPHAIMVSLGS
Ga0184642_13076862	3300019279	Groundwater Sediment	MRKLEIIGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY
Ga0193705_10813912	3300019869	Soil	IGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY
Ga0193703_10009721	3300019876	Soil	VAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY
Ga0193725_10966541	3300019883	Soil	RKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEHWSHPY
Ga0193729_11594703	3300019887	Soil	MRKLEIIGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSL
Ga0193728_10136202	3300019890	Soil	MRKLEIIGLAIVAATAIGVWSASTVAQSRVGKTDVLAASAPISPHVIMVKLGGSLPSEYWSHPY
Ga0193728_10540144	3300019890	Soil	LAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0193726_11610653	3300020021	Soil	MRKLEIIGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0193699_100052913	3300021363	Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKTDVLAASAPISPHVIMVKLGGSLPSEYWSHPY
Ga0193699_100182911	3300021363	Soil	IGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY
Ga0193699_100228933	3300021363	Soil	MRKLEIIGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEHWSHPY
Ga0193694_10413332	3300021415	Soil	TFTRDGRDNPMRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY
Ga0193695_10516331	3300021418	Soil	MRKLEIIGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGGSLPSEYWSHPY
Ga0207697_103497602	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRKLEIIGLAFVAATAFGVWSASTVAQSRIGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY
Ga0207697_103497603	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVKLGSNL
Ga0207656_105580001	3300025321	Corn Rhizosphere	MRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY
Ga0207643_100030652	3300025908	Miscanthus Rhizosphere	MRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0207659_100532652	3300025926	Miscanthus Rhizosphere	MRKLEIIGLAFVAATAFGVWSASTVAQSRIGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0207700_103648694	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GFCVRLITYHTGWRENPMRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0207701_100993626	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRIIGLAIVAATAFGVWSASPAAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHP
Ga0207709_101326815	3300025935	Miscanthus Rhizosphere	RDNPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0207669_118731331	3300025937	Miscanthus Rhizosphere	QAGGGFCVRLITYHTGWRDNPMRKLEIIGLAFVAATAFGVWSASTVAQSRIGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0207711_102087965	3300025941	Switchgrass Rhizosphere	LEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHP
Ga0179587_106593652	3300026557	Vadose Zone Soil	MRKLEIIGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPRAIMVKLGGSLPSEYWSHPY
Ga0208404_10043471	3300026855	Soil	SQAGGGFCVRLITYHTGWRDNPMRKLEIIGLAFVAATAFGVWSASPAAQSRVGKADVLAASAPISPHVIMWH
Ga0208762_10013021	3300026870	Soil	MRKLDIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHPY
Ga0208525_10102761	3300027288	Soil	MRKLGIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0207981_10246371	3300027560	Soil	GGGFCVRLITYHTGWRDNPMRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY
Ga0209069_108400091	3300027915	Watersheds	MRIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHP
Ga0307295_100061796	3300028708	Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKAHVLAASAPISPHAIMVKLGGSLPSEYWSHPY
Ga0307309_100159482	3300028714	Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY
Ga0307301_100323583	3300028719	Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLP
Ga0307315_102901451	3300028721	Soil	FTRDGRDNPMRKLEIIGLAIVAATAIGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0307320_102760491	3300028771	Soil	MRKLEIIGFAIVAATAFGVWSASTVAQSRVGKAHVLAASAPISPHAIMVKLGSSLPSEYW
Ga0307290_102565531	3300028791	Soil	IVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY
Ga0307299_104168191	3300028793	Soil	FEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGGSLPSEYWSHP
Ga0307287_101161861	3300028796	Soil	EIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGGSLPSEYWSHPY
Ga0307287_102912531	3300028796	Soil	IVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGGSLPSEYWSHPY
Ga0307305_102560062	3300028807	Soil	FTRDGRDNPMRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY
Ga0307305_104781771	3300028807	Soil	AATAFGLWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPH
Ga0307310_100097031	3300028824	Soil	LEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHP
Ga0307310_107066542	3300028824	Soil	MRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISSHAIVVKLGSSLPSEYWSHPY
Ga0307312_101680072	3300028828	Soil	MRKLEIIGFAIVAATAFGVWSASTVAQSRVGKAHVLAASAPISPHAIMVKLGGSLPSEYWSHPY
Ga0307289_101043623	3300028875	Soil	MRKFEIIGLAIVAATAFGLWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0307286_100043611	3300028876	Soil	FEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHP
Ga0307300_100232071	3300028880	Soil	EIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGGSLPSEYWSHPY
Ga0075402_122852882	3300030777	Soil	DNPMRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGGSLPSEYWSHPY
Ga0075382_117703292	3300030917	Soil	MRKLGIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGGSLPSEYWSHPY
Ga0308197_100411791	3300031093	Soil	VAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGGSLPSEYWSHPY
Ga0308188_10191432	3300031097	Soil	MRKFEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGGSLPSEYWSHPY
Ga0308182_10041574	3300031125	Soil	MRKLEIIGLAIVAATAFGVSSASTVAQSRVGKADVLAASAPISPHAIMVKLGGSLPSEYWSHPY
Ga0307496_101027501	3300031200	Soil	YHTGWRDNPMRKLEIIGLAFVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGSSLPSEYWSHPY
Ga0170824_1067460141	3300031231	Forest Soil	RDGRDNPMRKLEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHVIMVKLGGSLPSEYWSHPY
Ga0170820_160033492	3300031446	Forest Soil	DNPMRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0310886_104197602	3300031562	Soil	MRIIGLAIVAATAFGVWSASTAAQSRVGKADVLAASAPISPHAIMVSLGSSLPSEYWSHP
Ga0307468_1001148881	3300031740	Hardwood Forest Soil	MRKLEIIGLAFVAATAFGVWAASTVAQSRVGKADVFAASAPISPHAIMVKLGSSLPSEYWSHPY
Ga0310890_111797401	3300032075	Soil	MRKLGIIGLAIVAATAFGVWSASTAAQSRVGKADVLAASAPISPHAIMVKLGSSLPSEYGSHPY
Ga0364943_0401244_356_529	3300034354	Sediment	MRKFEIIGLAIVAATAFGVWSASTVAQSRVGKADVLAASAPISPHAIMVKLGSSLPSE

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054018

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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