3300006079: Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid D

Overview

Basic Information

• IMG/M Taxon OID: 3300006079
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0116794 | Gp0121523 | Ga0081601
• Sample Name: Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid D
• Sequencing Status: Permanent Draft
• Sequencing Center: Max Planck Institute for Plant Breeding Research
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 325976007
• Sequencing Scaffolds: 35
• Novel Protein Genes: 66
• Associated Families: 36

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	8
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Marinimicrobia bacterium SCGC AAA298-D23	1
All Organisms → cellular organisms → Bacteria	7
All Organisms → cellular organisms → Archaea → Euryarchaeota	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	1
All Organisms → cellular organisms → Bacteria → Proteobacteria	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Isorropodon fossajaponicum symbiont	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	2
All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Archaea	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	1
All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1
All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Candidatus Marinimicrobia bacterium	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1
All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote SCGC AAA799-O18	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium TMED156	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Microbial Communities In Diffuse Hydrothermal Fluids Of Manus Basin, Bismarck Sea
• Type: Environmental
• Taxonomy: Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluid → Microbial Communities In Diffuse Hydrothermal Fluids Of Manus Basin, Bismarck Sea

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): marine hydrothermal vent biome → marine hydrothermal vent → hydrothermal fluid
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline)

Location Information

• Location: Manus Basin, Bismarck Sea
• Coordinates
  • Lat. (^o): -3.7282978
  • Long. (^o): 151.672495
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F005433	Metagenome / Metatranscriptome	401	Y
F005684	Metagenome / Metatranscriptome	393	Y
F006552	Metagenome	370	Y
F009293	Metagenome / Metatranscriptome	320	Y
F013095	Metagenome	274	Y
F014191	Metagenome / Metatranscriptome	265	Y
F026538	Metagenome	197	Y
F027203	Metagenome	195	Y
F029561	Metagenome / Metatranscriptome	188	Y
F031535	Metagenome	182	N

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0081601_1000997	Not Available	8915
Ga0081601_1001526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7350
Ga0081601_1002245	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Marinimicrobia → Marinimicrobia bacterium SCGC AAA298-D23	6177
Ga0081601_1003263	Not Available	5183
Ga0081601_1004610	All Organisms → cellular organisms → Bacteria	4431
Ga0081601_1004615	All Organisms → cellular organisms → Archaea → Euryarchaeota	4426
Ga0081601_1004802	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium TMED240	4353
Ga0081601_1005396	All Organisms → cellular organisms → Bacteria → Proteobacteria	4133
Ga0081601_1007190	All Organisms → cellular organisms → Bacteria	3607
Ga0081601_1007400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Isorropodon fossajaponicum symbiont	3560

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0081601_1000997	Ga0081601_10009973	F052659	MLLSGNPGTEARSAVFIDGRLISSIPELNYQTIDKLQQGGVPDKVSWMKPSLRGRLRLVKLQAQERNLTIEDLNQSIRSKWVILWAEV*
Ga0081601_1001526	Ga0081601_10015261	F099440	VQLIKLKNQVLNGVKLIDENGRKIMVCGLHNTGQEKYIENFSQWTCNLLASCIV
Ga0081601_1001645	Ga0081601_10016454	F059475	MDNPEKLATYGTRDKDKQNRNTTQYVLDITTRKQTQIT*
Ga0081601_1002245	Ga0081601_10022453	F066130	MKIPLLKKLVHCLTRRGKKHRKLSQIQIENFDLNDFLFYRENRS*
Ga0081601_1003263	Ga0081601_10032639	F029561	MSNQVDKLTDPEFAHTSILSRGQLQMIEDDPAKMETLARLMGAVNLDNLFRHMQNPSVNPATRLEFQKMLNKMGKLEPDGKDVVGAGGPQVIINITRAKDREEAITIEGSTV*
Ga0081601_1004610	Ga0081601_10046104	F047906	VQEERRLFRLRGIAIVALAAKFTQKRTVTKERTPDAIRVPVAHRPVVGFGVLAVRWHHAVTKVRAALRLNMLVVAKRVSRVEIKFAVTAKAGLVQTQRLGVANAVVIRIVVAERVA*
Ga0081601_1004615	Ga0081601_10046151	F005684	PSDFSDRGVHARVQRPLGEGAGGSLTVYDTEESPLSLMQVVRRKSEVREGRLCNRNEPRQAHCEPERGRFPDRGWNEHPHRSKSKQVRMASTGPGRMHS*
Ga0081601_1004802	Ga0081601_10048021	F009293	MARISLANNNPHHFNVHEFSYSESLGDSDELYAAFESGLPVVIKNAKIPNLDYDYYDNLSEWVTPENKWVMPWYNSHIKNRDRLVNERGWNDNEIDTFHQHHKQSQAGWNTFFDTLFPKYNTSERMLSHRYNTLVQNKLHLDELDSEHTGNEQQMRMFVQLDKKRPRVLAFGPTVADLYNTYFDEFNLYELDIYDAHSFITDIRDRCIWNSKQMDQFHLPLNYVTLDPGDIWFFNAQWISHQIVFGTKLQCFETDIYKDSLIDPTM
Ga0081601_1005396	Ga0081601_10053968	F101330	MWLQNNYTVSFCGFIGVCIGYFTGHQEICIMIGVGIGILIR
Ga0081601_1007190	Ga0081601_10071903	F092215	MSQTPNDIALAETFHHSEDISGVWQGAGLIQLTETHHAPFVDDDYCPLAGPALLVPKVIRLADLALGMEVGQLGIGKATQRCAPSTVGRNCVAAYAQDLSIIILEPLVFLPERGRLRGSTRGEVEYVERKNNYLLALVVGQGNVPIGGGKFEIGG*
Ga0081601_1007400	Ga0081601_10074009	F033867	GIHIQTATRVIADYIAGEDKMIAEGKMPTVNHLYAFLDRMVDTFHDAHKDVMKRIGIKELIKDEFLYLEDK*
Ga0081601_1008189	Ga0081601_10081894	F094378	MQRRRSNHPGNSQAKGPYIITLERRLDLTEGVNLSGNKTEGVD*
Ga0081601_1009026	Ga0081601_10090262	F059475	MDNSDKLATLGTQDDDKQNKNTTQYVLNTTIHKQTQIALDSKRKDT*
Ga0081601_1009467	Ga0081601_10094673	F078841	MFDDSDVVHSESRSDKAKRAISEYLDEYGQVRATELKKEVCDELGICSEKIFYRCLFELVKSKRIIKNEQNRGNVSYYKPDWGVYENMINIDVIKQGTSTVRILAEVGRHENEVMQLTLLKMAFDNIMGMYASMTLITQQPGKAKTSAIITSTLKNTIPELLEMFSIALEKCGKNRSRILSSLMDYRDGNMGGGWVLENHPDFKK*
Ga0081601_1010296	Ga0081601_10102965	F059475	MDNPEKLATLGKTKINKTKTKHNTTQYVLDTTIRKQTQIM*
Ga0081601_1010847	Ga0081601_10108477	F069480	MRLVPIYIELIDRIYILESRNNIKRVEGNAGQILDEAPKNKPYNTVKTVFFSVFKPVVFL
Ga0081601_1010942	Ga0081601_10109423	F059475	MGNPEKLATYGTIDEEKQNKNTTQYVLDTTICKQHKLLK*
Ga0081601_1013602	Ga0081601_10136022	F059475	MDNREKLATYGTQDKEKQNKNTTQYVLDTTTRKKTQIT*
Ga0081601_1016853	Ga0081601_10168532	F054935	MKRRTFIKYTSLISTAVFLPLAQLFGAKPKPKNPYTTFDFNLPLQGSPFRKNCDSLDNYNDISFKAMMEDIVHYRTPAKLRDKLILGIKTEDD*
Ga0081601_1022167	Ga0081601_10221673	F059475	MDDPEKLATQGTQDEEKQNKHRTQYVLDTTIGKQTQIT*
Ga0081601_1027409	Ga0081601_10274094	F101330	NASGSNQSSLMWLQNNYTVSLCGFIGVCIGYFTGHQEICIMIGVGIGILIRFVQSKSK*
Ga0081601_1030562	Ga0081601_10305623	F105866	MALEVKDIPYVRKDDTFKTWRERTNQMIQQQNNYVRLQEFQMLGMSDEYVIASMQMNLVEITNQE*
Ga0081601_1032203	Ga0081601_10322032	F059475	MDNPEKLETYGTQDEEKQSKNTTQYALDTTLRKQTQIS*
Ga0081601_1040604	Ga0081601_10406041	F073166	MNLNYKHLGMYLVAGIVSGLLWHFSGIIDIDLMLFSTNCTPAIILGIMIFLAGRYISGITPRNPWLNPLILILACGIGWFLALQFGGEYWKKDGSWIGSGIIGGFFVGIGLVIAWRLKRIWMVIVLTTLAGGLGGLVLVYALWDFSVWNSSYIEVLLLEITCFAQEMRADF*
Ga0081601_1041260	Ga0081601_10412602	F052866	MKKQTFSIRFGIIILLIAFIHAQENRDALVGAWEFKSMTTIHYSEPKQVEIIYSSEKNNETLTFNQDSSFTYKGVSSGEQDNDTGSWSTENNQLIIDLKNMKTISKYKILDNALTIIIHDMKTDEYHAFDTVLEYKKSN*
Ga0081601_1044111	Ga0081601_10441113	F063069	ELNNPIKKLCPTHEKKVKTKPKKIILKFDLIISIIIINYEL*
Ga0081601_1047621	Ga0081601_10476211	F059475	MDNPEKLAQDEDQQNKNTTQYVLDTKIRKETQITLIRYEPSYKQLEV*
Ga0081601_1050739	Ga0081601_10507391	F027203	DFVTTAPAPARYNRSKILSDIPKIPEARIVGLSRVNVPIEVERLAATLNSLIIFSYNS*
Ga0081601_1056942	Ga0081601_10569421	F059475	LSNKRKGMDNPEKLATQVTQDEEKQNKYTTQYVLDTFVHKQTQIM*
Ga0081601_1058775	Ga0081601_10587753	F059475	MDNPEILATYGTQNKDEEKQNKNTTRYVLDTIIRKQTQIT*
Ga0081601_1063222	Ga0081601_10632222	F059475	MDNPEKLETQVTQDEEKQNKNTTQYVLDTTMCKQTQIT*
Ga0081601_1090076	Ga0081601_10900762	F042383	MKGIKMETTYNNFPTPDDFYEGPSDEDLKRIEEDLERYSD*
Ga0081601_1091275	Ga0081601_10912753	F059475	MDNPEKPATQGTQIQDEDRQSKNTTQYVLDNTIRKQIHIT*
Ga0081601_1092320	Ga0081601_10923201	F066858	DIIPAKKLAPAEKTSKRLDTSAGFSPSFLLRNMYDAEEMRISANKILKMSGDKSEDTNAPSIVPGTAIKPSFHPSESSIRFCLAYIAVDATELLNTANKLLLTANVGENPANVNTGTMIIPPPRPIIDPNIPATNPSGINQSSSSMIKSRLILV*
Ga0081601_1094685	Ga0081601_10946851	F059475	MDNPEKLATQDEEKQNKNAIQYVLDTTIRKQTKIQLMFISIQIISY*
Ga0081601_1096116	Ga0081601_10961161	F059475	MAKSKMDNSEKLATYGTQDEEKQNTTQYVLDTTIRKQIEIT*
Ga0081601_1107899	Ga0081601_11078992	F059475	MAYPEKLATYGTQDEDKQNKNTTQYVLDTTIHKQIK*
Ga0081601_1113372	Ga0081601_11133722	F059475	MDNPEKLATFGTQDEDKQTSKTTTQYMLDTTVRKQTQMT
Ga0081601_1113982	Ga0081601_11139821	F059475	MDDPEKLVTQSTQDKEKQSKNTTRYVLDTTIRKQTQIT*
Ga0081601_1120181	Ga0081601_11201811	F059475	MNNPEKLATWGTQDEEKQNKITTQNVLDTTMRKQTQTT*
Ga0081601_1120305	Ga0081601_11203053	F059475	MDNPEKLATCGTQDKDKQKKKTTQYVLDTIIQKQTQIT*
Ga0081601_1120840	Ga0081601_11208401	F059475	PKGQSKMDNPEKLTTQGTHDEEKQNKHITQYVLDTTIHSQTQIT*
Ga0081601_1120892	Ga0081601_11208922	F059475	MWQYKKDNPEALATQVTQDEDKQNKNTTYYVLDVTVYIYISKQTQIT*
Ga0081601_1123720	Ga0081601_11237201	F029561	MSNQVDKLTDPEFAHTSILSRGQLQMIEDDPAKMETLARLMGAVNLDNLFRHMQNPTINPATRLEFQKMLNKMGKLEPDGKDVVGAGGPQVIINITRAKDREEAEAITIEGATV*
Ga0081601_1128724	Ga0081601_11287243	F014191	MDLNFITAELLNGISWFDGIIYIVLGLGVYAVAKYINTKM*
Ga0081601_1131011	Ga0081601_11310111	F082562	MNKLILSILITLSTVLFAQASDSSNNYFFNIELSLIHPILGGFGGTVGIEKNHFSYGLNSFGTKLNHMTKHYLLENAEELAVYNWGVELYSDYYFKQNHTGLFLGLILSLNGFRFNDIPNPQTILVLYSAPRIGYRLCLPKKLKSFYFQYSLTTHFKVWDDEKKFLYREIDTKSIFLLSQLTLGVKIPGRQKDVLDRIKRMKGIK*
Ga0081601_1135590	Ga0081601_11355903	F102126	MGRKKGEEVRRGQDAQRLTEDPLYKEAFITTKEHLIDMLLQTKISEEVERDWIYVTIKSLDLVDQHIQSVLETGKLAEKGQEFYYSN*
Ga0081601_1146160	Ga0081601_11461602	F059475	MDNPETLTTYGTQDEEKQSKNTTQYVLDTSMRKQTNIT*
Ga0081601_1148898	Ga0081601_11488982	F059475	MDNPEKLATFGTQDEDKQNKNTIQYVSDTTLRKHK*
Ga0081601_1171430	Ga0081601_11714301	F071317	MLKKITAVGLITLFAGMTAAPFIPLDDCNMPCCAGIATSCCEMDQEMTCPTMTDCGASVFVLIVSGPFHKSELKSSDIISQQFVTDLGIPKIETNYVPHFGNFDPGPMASMNLPLLI*
Ga0081601_1183462	Ga0081601_11834622	F059475	MDNSEKLATMGTQDEEKQNKNTTQYVLDTTMRKQMQIK*
Ga0081601_1193848	Ga0081601_11938481	F031660	QLGKFKKVIVNCSLEGMGDMNDYLRPPSNWKSVWNNFTKLVDFSQTVEGKNIKVRVTTVNQITNALHIVDFWRFLHSYQSTVENGIGVSTNQLIEPDYYSMANAPTWLKDQQEEQILAFLNEIKDSKHYIDYSESLMEIVSFGKDSEHRYNADKIKQYIQVTENYDKFRGHDILSVSPEFNRLKEDL*
Ga0081601_1200850	Ga0081601_12008502	F059475	NNPEKLATQGTLHAEKQNKNTTQYVLDTTTRKQTQTT*
Ga0081601_1207223	Ga0081601_12072231	F047303	MLLRLFHALIGAVLGAVFGAVFGWVFVGFNLNLISICAGIAGVLAFVWGEPVIDWLKENLWLWL
Ga0081601_1213441	Ga0081601_12134412	F059475	MHNPEKMAPLGTQDEEKQNKNTTQYVLDITIPKQTHIIMT*
Ga0081601_1218191	Ga0081601_12181911	F059475	MDNPEKPTTYGTQDKEKQNKNTTQYMLDTTIHKQTQIT*
Ga0081601_1221021	Ga0081601_12210211	F032684	MRLLCTLRVLALIDKFKSNFSLFKAEEVMFLPFGIITKNTLKNIIQPKITPTDKNANLDPKI
Ga0081601_1223209	Ga0081601_12232092	F006552	DLKYLDLGKKVLIV*ENAINQYPTVWEATPKVEIPLLISPVLKIKSSRINPVANIPKPIPIAKKAIDILNNVGLPVFLNPIYEIVPITRPTKSPTKFRIISRKNSNYADSATVLNKVSEQVF*
Ga0081601_1226945	Ga0081601_12269451	F013095	MNKMTPIIPIKLPMNSTVSLTSPTRGAQKTAIKKPVTIIGIPIPTVICFDAMLSITAKIVYEVYDET*
Ga0081601_1231454	Ga0081601_12314542	F026538	MYKLNEESITRLSDNASIPQADGNRDYQQFLQDVKEQGIS
Ga0081601_1238907	Ga0081601_12389072	F031535	GPKNTRAYVAIASANQLRGLTNEVNHFQVPFKTFEFYPVNIE*
Ga0081601_1239634	Ga0081601_12396341	F098016	LPDEASADERLAQVSDDLPEPQLVVPLDDEEPDAPVLEDNAPVSLDGLSQHPADLGQQAAPSIELLLTRPDPAAANSTVAQFVLPGSPPISPFPGWMSVADLYEPEDQLFLPETPIGVPTELAEPDAVAFTNGASDAPLAETPLPETTSVLDVEAVEADLDVWMASLESPSVFLDVPSVQVAMNDTVVRDVWVDD
Ga0081601_1253549	Ga0081601_12535492	F099328	AGTAEVCFVFLSRRIFLGEDLRAAIVCQARRALFK*
Ga0081601_1259544	Ga0081601_12595441	F005433	MSIRTKFEIETFVLGTHPTQSRKAMILVSELEEARATSHPDLSVLEEIYEEFSKENDVESLIADIDNDEEQYWVERLAKLAAIDILTIGKVQPEHMSYMASLSDDAFIATVKGATVFAKKLNASVRDIEEELSADLVAD*
Ga0081601_1274399	Ga0081601_12743991	F059475	VAIKMDDPEKRQHSTQDEDKQNKNTTQYVLDTTMRKQTQIP*
Ga0081601_1289369	Ga0081601_12893692	F033867	VIADYIASEDKMIAEGKMPTVNHLYAFLDRMADTFHDAHKDVMKRIGIKELIKDEFLYLEKKDDDS*