NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F094378

Metagenome / Metatranscriptome Family F094378

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F094378
Family Type Metagenome / Metatranscriptome
Number of Sequences 106
Average Sequence Length 42 residues
Representative Sequence WRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGNQTEGV
Number of Associated Samples 78
Number of Associated Scaffolds 106

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 10.38 %
% of genes near scaffold ends (potentially truncated) 92.45 %
% of genes from short scaffolds (< 2000 bps) 78.30 %
Associated GOLD sequencing projects 73
AlphaFold2 3D model prediction Yes
3D model pTM-score0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (57.547 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(33.019 % of family members)
Environment Ontology (ENVO) Unclassified
(75.472 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(86.792 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.94%    β-sheet: 0.00%    Coil/Unstructured: 84.06%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.20
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 106 Family Scaffolds
PF01571GCV_T 50.00
PF08669GCV_T_C 17.92
PF02347GDC-P 11.32
PF01597GCV_H 8.49
PF00892EamA 4.72
PF03255ACCA 1.89
PF00106adh_short 0.94
PF01274Malate_synthase 0.94
PF01266DAO 0.94
PF07690MFS_1 0.94
PF00571CBS 0.94

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 106 Family Scaffolds
COG0403Glycine cleavage system protein P (pyridoxal-binding), N-terminal domainAmino acid transport and metabolism [E] 11.32
COG1003Glycine cleavage system protein P (pyridoxal-binding), C-terminal domainAmino acid transport and metabolism [E] 11.32
COG0509Glycine cleavage system protein H (lipoate-binding)Amino acid transport and metabolism [E] 8.49
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 1.89
COG2225Malate synthaseEnergy production and conversion [C] 0.94


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.55 %
All OrganismsrootAll Organisms42.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000163|LPjun09P162000mDRAFT_c1022800Not Available975Open in IMG/M
3300000323|LPaug09P202000mDRAFT_1006051All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2472Open in IMG/M
3300001006|JGI12027J13101_100912All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1403Open in IMG/M
3300001676|TuiMalila_1003394All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique5131Open in IMG/M
3300001676|TuiMalila_1023789All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1446Open in IMG/M
3300001679|TahiMoana_1027414All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique3036Open in IMG/M
3300005402|Ga0066855_10096259Not Available927Open in IMG/M
3300005404|Ga0066856_10401103Not Available587Open in IMG/M
3300005427|Ga0066851_10085747Not Available1034Open in IMG/M
3300005429|Ga0066846_10287398Not Available535Open in IMG/M
3300005429|Ga0066846_10295767All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.526Open in IMG/M
3300005595|Ga0066833_10231611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.508Open in IMG/M
3300005596|Ga0066834_10042174All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1555Open in IMG/M
3300005605|Ga0066850_10294084Not Available573Open in IMG/M
3300005605|Ga0066850_10357019Not Available510Open in IMG/M
3300005753|Ga0077776_1047943Not Available4665Open in IMG/M
3300005945|Ga0066381_10186864All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.595Open in IMG/M
3300006012|Ga0066374_10226448Not Available548Open in IMG/M
3300006079|Ga0081601_1008189All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter3388Open in IMG/M
3300006166|Ga0066836_10321625Not Available928Open in IMG/M
3300006166|Ga0066836_10395669Not Available832Open in IMG/M
3300006166|Ga0066836_10581884All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.678Open in IMG/M
3300006166|Ga0066836_10624310Not Available652Open in IMG/M
3300006166|Ga0066836_10786052Not Available575Open in IMG/M
3300006313|Ga0068472_10235999All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique4833Open in IMG/M
3300006313|Ga0068472_10665334Not Available647Open in IMG/M
3300006315|Ga0068487_1393260Not Available703Open in IMG/M
3300006330|Ga0068483_1484917Not Available741Open in IMG/M
3300006331|Ga0068488_1375830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.504Open in IMG/M
3300006331|Ga0068488_1399959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1485Open in IMG/M
3300006341|Ga0068493_10681073Not Available501Open in IMG/M
3300007283|Ga0066366_10086470Not Available1186Open in IMG/M
3300007509|Ga0105012_1167415Not Available776Open in IMG/M
3300007512|Ga0105016_1147486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae1253Open in IMG/M
3300008097|Ga0111541_10560709All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.506Open in IMG/M
3300008629|Ga0115658_1011654All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique7362Open in IMG/M
3300008735|Ga0115657_1080591All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2118Open in IMG/M
3300008735|Ga0115657_1108612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1679Open in IMG/M
3300009103|Ga0117901_1189758Not Available1110Open in IMG/M
3300009104|Ga0117902_1191060All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2045Open in IMG/M
3300009104|Ga0117902_1308200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1461Open in IMG/M
3300009109|Ga0117922_1041003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2797Open in IMG/M
3300009110|Ga0117925_1066639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1438Open in IMG/M
3300009376|Ga0118722_1270739Not Available973Open in IMG/M
3300009376|Ga0118722_1364839Not Available733Open in IMG/M
3300009376|Ga0118722_1396410Not Available650Open in IMG/M
3300009409|Ga0114993_10099726All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2285Open in IMG/M
3300009409|Ga0114993_10335192Not Available1146Open in IMG/M
3300009409|Ga0114993_10706221Not Available734Open in IMG/M
3300009420|Ga0114994_10977069Not Available548Open in IMG/M
3300009593|Ga0115011_11559802Not Available586Open in IMG/M
3300009703|Ga0114933_10788398Not Available606Open in IMG/M
3300009706|Ga0115002_10009681All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique10467Open in IMG/M
3300010883|Ga0133547_10809188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1839Open in IMG/M
3300011312|Ga0138349_1006543Not Available788Open in IMG/M
3300012950|Ga0163108_10535061Not Available757Open in IMG/M
3300012950|Ga0163108_10798166Not Available610Open in IMG/M
3300012950|Ga0163108_10966968Not Available550Open in IMG/M
3300020263|Ga0211679_1037056Not Available894Open in IMG/M
3300020268|Ga0211495_1027143All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.1184Open in IMG/M
3300020275|Ga0211562_1044309Not Available998Open in IMG/M
3300020277|Ga0211568_1026720All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique1353Open in IMG/M
3300020322|Ga0211563_1049431Not Available928Open in IMG/M
3300020344|Ga0211570_1011008All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2928Open in IMG/M
3300020344|Ga0211570_1011817All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2785Open in IMG/M
3300020357|Ga0211611_1086173Not Available749Open in IMG/M
3300020373|Ga0211660_10067029All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter1462Open in IMG/M
3300020411|Ga0211587_10098279Not Available1273Open in IMG/M
3300020411|Ga0211587_10112507Not Available1174Open in IMG/M
3300020462|Ga0211546_10285574Not Available824Open in IMG/M
3300020462|Ga0211546_10540517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.588Open in IMG/M
3300020477|Ga0211585_10078240All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique2324Open in IMG/M
3300020477|Ga0211585_10083380All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2229Open in IMG/M
3300020477|Ga0211585_10205698Not Available1239Open in IMG/M
3300020478|Ga0211503_10035499All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique3193Open in IMG/M
3300020478|Ga0211503_10040319All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2963Open in IMG/M
3300020478|Ga0211503_10287440Not Available901Open in IMG/M
3300020478|Ga0211503_10352156Not Available796Open in IMG/M
3300020478|Ga0211503_10553793Not Available603Open in IMG/M
3300021084|Ga0206678_10306615Not Available763Open in IMG/M
3300022227|Ga0187827_10041775All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter3795Open in IMG/M
3300025191|Ga0207921_103246All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2651Open in IMG/M
3300025196|Ga0207918_105497Not Available1621Open in IMG/M
3300025196|Ga0207918_134418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.533Open in IMG/M
3300025198|Ga0208059_1018713Not Available757Open in IMG/M
3300025210|Ga0208058_1016028Not Available1059Open in IMG/M
3300025215|Ga0207920_1040188Not Available736Open in IMG/M
3300025243|Ga0208335_1016977Not Available1203Open in IMG/M
3300026208|Ga0208640_1094672Not Available639Open in IMG/M
3300026254|Ga0208522_1068013Not Available1051Open in IMG/M
3300026263|Ga0207992_1151766All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.579Open in IMG/M
3300026265|Ga0208765_1168668Not Available519Open in IMG/M
3300026269|Ga0208766_1017315All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2739Open in IMG/M
3300026279|Ga0208411_1007791All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique4997Open in IMG/M
3300026321|Ga0208764_10167247Not Available1103Open in IMG/M
3300027838|Ga0209089_10464608Not Available689Open in IMG/M
3300027839|Ga0209403_10064228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter2612Open in IMG/M
3300027847|Ga0209402_10549201Not Available663Open in IMG/M
3300028487|Ga0257109_1235598All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.507Open in IMG/M
3300028489|Ga0257112_10176710Not Available752Open in IMG/M
3300031803|Ga0310120_10151701Not Available1295Open in IMG/M
3300031804|Ga0310124_10777510Not Available537Open in IMG/M
3300032006|Ga0310344_10217268All Organisms → cellular organisms → Bacteria1628Open in IMG/M
3300032006|Ga0310344_10789923Not Available805Open in IMG/M
3300032048|Ga0315329_10411400Not Available721Open in IMG/M
3300032278|Ga0310345_10942037Not Available843Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine33.02%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine19.81%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine12.26%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean8.49%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine7.55%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater3.77%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine3.77%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater2.83%
Black Smokers Hydrothermal PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume2.83%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater1.89%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine0.94%
Deep-Sea Hydrothermal VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Deep-Sea Hydrothermal Vent0.94%
Diffuse Hydrothermal FluidEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluid0.94%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.94%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000163Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 2000mEnvironmentalOpen in IMG/M
3300000323Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P20 2000mEnvironmentalOpen in IMG/M
3300001006Marine microbial communities from the Deep Atlantic Ocean - MP0758EnvironmentalOpen in IMG/M
3300001676Black smokers hydrothermal plume microbial communities from Tui Malila, Lau Basin, Pacific OceanEnvironmentalOpen in IMG/M
3300001679Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific OceanEnvironmentalOpen in IMG/M
3300005402Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73EnvironmentalOpen in IMG/M
3300005404Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205EnvironmentalOpen in IMG/M
3300005427Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65EnvironmentalOpen in IMG/M
3300005429Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76EnvironmentalOpen in IMG/M
3300005595Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47BEnvironmentalOpen in IMG/M
3300005596Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43BEnvironmentalOpen in IMG/M
3300005605Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67EnvironmentalOpen in IMG/M
3300005753Microbial community analysis of hydrothermal vent diffuse flow samples from Mid-Cayman Rise, Pacific Ocean - mega-assemblyEnvironmentalOpen in IMG/M
3300005945Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_AAIW_ad_876m_LV_BEnvironmentalOpen in IMG/M
3300006012Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_AEnvironmentalOpen in IMG/M
3300006079Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid DEnvironmentalOpen in IMG/M
3300006166Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91EnvironmentalOpen in IMG/M
3300006313Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770mEnvironmentalOpen in IMG/M
3300006315Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_0770mEnvironmentalOpen in IMG/M
3300006330Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_1000mEnvironmentalOpen in IMG/M
3300006331Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000mEnvironmentalOpen in IMG/M
3300006341Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770mEnvironmentalOpen in IMG/M
3300007283Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_BEnvironmentalOpen in IMG/M
3300007509Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate bEnvironmentalOpen in IMG/M
3300007512Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate bEnvironmentalOpen in IMG/M
3300008097Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)EnvironmentalOpen in IMG/M
3300008629Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300008735Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009103Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7umEnvironmentalOpen in IMG/M
3300009104Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2umEnvironmentalOpen in IMG/M
3300009109Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 234m, 2.7-0.2um, replicate bEnvironmentalOpen in IMG/M
3300009110Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 2.7-0.2um, replicate bEnvironmentalOpen in IMG/M
3300009376Combined Assembly of Gp0137079, Gp0137080EnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009593Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 MetagenomeEnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300010883western Arctic Ocean co-assemblyEnvironmentalOpen in IMG/M
3300011312Marine microbial communities from the Deep Pacific Ocean - MP2100 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012950Marine microbial communities from the Central Pacific Ocean - Fk160115 155m metaGEnvironmentalOpen in IMG/M
3300020263Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX555942-ERR599125)EnvironmentalOpen in IMG/M
3300020268Marine microbial communities from Tara Oceans - TARA_B000000477 (ERX556113-ERR599107)EnvironmentalOpen in IMG/M
3300020275Marine microbial communities from Tara Oceans - TARA_B100002003 (ERX555991-ERR599175)EnvironmentalOpen in IMG/M
3300020277Marine microbial communities from Tara Oceans - TARA_B100001971 (ERX556102-ERR599152)EnvironmentalOpen in IMG/M
3300020322Marine microbial communities from Tara Oceans - TARA_B100002003 (ERX556138-ERR599051)EnvironmentalOpen in IMG/M
3300020344Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556104-ERR598987)EnvironmentalOpen in IMG/M
3300020357Marine microbial communities from Tara Oceans - TARA_B100000686 (ERX555950-ERR598956)EnvironmentalOpen in IMG/M
3300020373Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)EnvironmentalOpen in IMG/M
3300020411Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)EnvironmentalOpen in IMG/M
3300020462Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)EnvironmentalOpen in IMG/M
3300020477Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)EnvironmentalOpen in IMG/M
3300020478Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)EnvironmentalOpen in IMG/M
3300021084Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015EnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300025191Marine microbial communities from the Deep Atlantic Ocean - MP0104 (SPAdes)EnvironmentalOpen in IMG/M
3300025196Marine microbial communities from the Deep Atlantic Ocean - MP0440 (SPAdes)EnvironmentalOpen in IMG/M
3300025198Marine microbial communities from the Deep Indian Ocean - MP0959 (SPAdes)EnvironmentalOpen in IMG/M
3300025210Marine microbial communities from the Deep Atlantic Ocean - MP1092 (SPAdes)EnvironmentalOpen in IMG/M
3300025215Marine microbial communities from the Deep Atlantic Ocean - MP0204 (SPAdes)EnvironmentalOpen in IMG/M
3300025243Marine microbial communities from the Deep Atlantic Ocean - MP0759 (SPAdes)EnvironmentalOpen in IMG/M
3300026208Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV72 (SPAdes)EnvironmentalOpen in IMG/M
3300026254Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV86 (SPAdes)EnvironmentalOpen in IMG/M
3300026263Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255 (SPAdes)EnvironmentalOpen in IMG/M
3300026265Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV203 (SPAdes)EnvironmentalOpen in IMG/M
3300026269Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 (SPAdes)EnvironmentalOpen in IMG/M
3300026279Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261 (SPAdes)EnvironmentalOpen in IMG/M
3300026321Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300027847Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 (SPAdes)EnvironmentalOpen in IMG/M
3300028487Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000mEnvironmentalOpen in IMG/M
3300028489Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1000mEnvironmentalOpen in IMG/M
3300031803Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983EnvironmentalOpen in IMG/M
3300031804Marine microbial communities from Western Arctic Ocean, Canada - CB11b_AW_Bot5EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032048Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
LPjun09P162000mDRAFT_102280023300000163MarineRRRSNHPGNSQAKGPYIITLERRLGLTEGVNLSGNKTEGVD*
LPaug09P202000mDRAFT_100605113300000323MarineGCRRSNHPGNSQAKGPCIITLERRLGLTEGVNLSGNKTEGVD*
JGI12027J13101_10091213300001006Deep OceanNHPGNSQAKGPYIITLERRRSLTEGAKLSGNKTDGVF*
TuiMalila_100339413300001676Black Smokers Hydrothermal PlumeDQFNWRRRSNHPGNSQAKGPYIITLERRLGLTEGVNLSGNKTEGVD*
TuiMalila_102378913300001676Black Smokers Hydrothermal PlumeYGRDQFNWRRRSNHPGNSQAKGPYIITLESRLSLTEGVNLSGN*
TahiMoana_102741413300001679Black Smokers Hydrothermal PlumeRRSNHPGNSQAKGPYIITLERRRSLTEGAKLSGNKTEGVF*
Ga0066855_1009625923300005402MarineSYGRDQFSWRRRSNHPGNSQAKGPYIITLERRLGLTEGVNLSGK*
Ga0066856_1040110313300005404MarineMPSIRERPILLAPKEQRNPGNSQAKGPYIITLESRLCLTEGVNLSG
Ga0066851_1008574713300005427MarineYGRDQFNWRRRSNHPGNSQAKGPYIMTLERRLSLTEGVNLSGNRTEGVY*
Ga0066846_1028739813300005429MarineWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGNQTEGV*
Ga0066846_1029576713300005429MarineYGRDQFNWRRRSNHPGNSQAKEPYIITLERRLGLTEGVNLSGNKTEGVD*
Ga0066833_1023161113300005595MarineFNWRRRSNHPGNSQAKGPYIMTLERRLSLTEGVNLSGNRTEGVY*
Ga0066834_1004217413300005596MarineRDQFNWRRRSNHPGNSQAKGPYIMTLERRLSLTEGVNLSGNRTEGVY*
Ga0066850_1029408413300005605MarineWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGNRTEGVY*
Ga0066850_1035701913300005605MarineRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGNQTEGV*
Ga0077776_104794313300005753Deep-Sea Hydrothermal VentMQRRRSNHPGNSQAKGPCIITLERRLGLTEGVNLSGNKTEGVD*
Ga0066381_1018686423300005945MarineSWRRRSNHPGNSQAKGPYIITLERRHSLTEGAKLSGNKTEGVF*
Ga0066374_1022644823300006012MarineWRRRSNHPGNSQAKGPCIITLERRLGLTEGVNLSGNKTEGVD*
Ga0081601_100818943300006079Diffuse Hydrothermal FluidMQRRRSNHPGNSQAKGPYIITLERRLDLTEGVNLSGNKTEGVD*
Ga0066836_1032162513300006166MarineMPPYGRDQFYWRRRSNHPGNSQAKGPYIITLESRHCLTEGVN
Ga0066836_1039566913300006166MarineDQFDWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGN*
Ga0066836_1058188423300006166MarineIWRRRSNHPGNSQAKGPYIITLERRQSLTEGVNLSGKKTDGVC*
Ga0066836_1062431023300006166MarineDQFDWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGNQTEGV*
Ga0066836_1078605223300006166MarineNWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGN*
Ga0068472_1023599963300006313MarineMTNYGRDQFNWRRRSNHPGNSQAKGPCIITLERRLGLTEGVNLSGNKTEGVD*
Ga0068472_1066533413300006313MarineNHSRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGN*
Ga0068487_139326013300006315MarineAKRPQRRRSKHPGNSQAKGPHIITLERRLCLTEGVNLSGTQTEGA*
Ga0068483_148491713300006330MarineKDFRASRRSNHPGNSQAKGPYIITLERRHSLTEGAKLSGN*
Ga0068488_137583013300006331MarineLHENSQAKGPYIITLESRLALTEGVNLSGNKTEGVD*
Ga0068488_139995913300006331MarineRRRSKHPGNSQAKGPYIITLERRLGLTEGVNLSGNKTEGVD*
Ga0068493_1068107323300006341MarineLQRRRSNHPGNSQAKGPIIITLERRLSLTEGVNLSGK*
Ga0066366_1008647023300007283MarineRDQYNWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGTWTEG*
Ga0105012_116741513300007509MarinePGNSQAKGPYIITLERRLSLTEGVNLSGTWTEGEDKELL*
Ga0105016_114748613300007512MarineLAPKEQHPGNSQAKGPYIITLERRLSLTEGVNLSGTRTEGDDKEL
Ga0111541_1056070913300008097MarineHPGNSQAKGPYIITLERRLSLTEGVNLSGTRTEGEDKELL*
Ga0115658_101165483300008629MarineKTYSTKYILYGRDQFDWRRRSNHPGNSQAKGPYIITLESRHGLTEGVNLSGN*
Ga0115657_108059113300008735MarineRRRSNHPGNSQAKGPYIITLERRLCLTEGVNLSGN*
Ga0115657_110861213300008735MarineDQFNWRRRSNHPGNSQAKGPYIITLERRLCLTEGVNLSGS*
Ga0117901_118975813300009103MarineAPKEQRPGNSQAKGPYIITLERRLSLTEGVNLSGN*
Ga0117902_119106013300009104MarineRRRSKHPGNSQAKGPHIITLERRLCLTEGVNLSGN*
Ga0117902_130820013300009104MarineQFNWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGTQTEGAG*
Ga0117922_104100313300009109MarineYPGNSQAKGPYIITLERRRGLTEGVNLSGTWTEGAC*
Ga0117925_106663913300009110MarineRRSNHPGNSQAKGPYIITLERRRGLTEGVNLSGTWTEGAC*
Ga0118722_127073913300009376MarineRRRSNHPGNSQAKGPYIITLERRFCLTEGVNLSGN*
Ga0118722_136483923300009376MarineQAKGPYIITLERRLSLTEGVNLSGTWTEGEDKELL*
Ga0118722_139641013300009376MarineDQFNWRRRSNHPGNSQAKGPYIITLERRLCLTEGVNLSGTQTEGV*
Ga0114993_1009972643300009409MarineRSNRPGNSQAKGPYIITLESRLSLTEGANLSGKKTDGV*
Ga0114993_1033519213300009409MarineRRSNHPGNSQAKGPYIITLERRRSLTEGANLSGNKTDGVL*
Ga0114993_1070622113300009409MarineLIRERPIYWRRRSNHPGNSQAKGPYIITLESRRSLTEGINLSGKKTDGV*
Ga0114994_1097706923300009420MarineWRRRSNHPGNSQAKGPYIITLERRRSLTEGANLSGKKTDGV*
Ga0115011_1155980213300009593MarineGRDQFNWRRRSNHPGNSQAKGPYIITLERRRSLTEGVKLSGTQTDGV*
Ga0114933_1078839813300009703Deep SubsurfaceLQRRRSNHPGNSQAKGPIIITLERRLSLTEGVNLSGNKTEGA*
Ga0115002_10009681123300009706MarineWRRRSNHPGNSQAKGPYIITLERRRSLTEGVNLSGKKTDGV*
Ga0133547_1080918813300010883MarineRSNHPGNSQAKGPYIITLERRLSLTEGANLSGKKTDGVS*
Ga0138349_100654313300011312Deep OceanQFNWRRRSNHLGNSQAKGPYIITLERRLSLTEGVNLSGK*
Ga0163108_1053506123300012950SeawaterWRRRSNHPGNSQAKGPYIITLESRHGLTEGVNLSGN*
Ga0163108_1079816613300012950SeawaterRRRSNHPGNSQAKGPYIITLESRRCLTEGVNLSGN*
Ga0163108_1096696813300012950SeawaterNWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGNRTEGVY*
Ga0211679_103705623300020263MarineMQRRRSNHPGNSQAKGPCIITLERRLGLTEGVNLSGNKTEGVD
Ga0211495_102714323300020268MarineYIWRRRSNHPGNSQAKGPYIITLERRLSLTEGANLSGKKTDGV
Ga0211562_104430913300020275MarineDSYGRDQFNWRRRSNHLGNSQAKGPYIITLERRLGLTEGVNLSGK
Ga0211568_102672013300020277MarineRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGNRTEGVY
Ga0211563_104943113300020322MarineWRRRSNHPGNSQAKGPYIITLERRLGLTEGVNLSGK
Ga0211570_101100813300020344MarineDQFNWRRRSNHPGNSQAKEPYIITLERRLDLTEGVNLSGNKTEGVD
Ga0211570_101181713300020344MarineNHPGNSQAKGPYIITLERRLSLTEGVNLSGNRTEGVY
Ga0211611_108617323300020357MarineLAPKEQRPGNSQAKGPYIMTLERRLSLTEGVNLSGN
Ga0211660_1006702913300020373MarineWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGNRTEGVY
Ga0211587_1009827923300020411MarineHPGNSQAKGPYIITLERRVDLTEGVNLSGKKTEGV
Ga0211587_1011250713300020411MarineRSNHPGNSQAKGPYILTLERENILAEGANLSGTQTEGAKG
Ga0211546_1028557413300020462MarineRRSNHPGNSQAKGPIEAQYSGKRLSSTEGVKLSGKKTEGAL
Ga0211546_1054051713300020462MarineWRRRSNHPGNSQAKGPYIITLERRLSLTEGANLSGKKTDGV
Ga0211585_1007824043300020477MarinePGNSQAKGPYIITLERRLSLTEGVNLSGTWTEGAG
Ga0211585_1008338043300020477MarineRRRSNHPGNSQAKGPCILTLERENILAEGANLSGTQTEGVKG
Ga0211585_1020569813300020477MarineYGRDQFNWRRRSNHPGNSQAKGPYIITLESRLCLTEGVNLSGT
Ga0211503_1003549913300020478MarineWRRRSNHPGNSQAKGPYIITLERRLCLTEGVNLSGN
Ga0211503_1004031913300020478MarineSNHPGNSQAKGPYILTLEREYILAEGANLSGTQTEGAKGLIWK
Ga0211503_1028744013300020478MarineDWRRRSNHPGNSQAKGPYIITLERRLCLTEGVNLSGN
Ga0211503_1035215623300020478MarineLAPKEQRPGNSQAKGPYIITLERRLGLTEGVNLSGTWTEGEDKELL
Ga0211503_1055379313300020478MarineDWRRRSNHPGNSQAKGPYIITLERRVDLTEGVNLSGKKTEGV
Ga0206678_1030661523300021084SeawaterHPGNSQAKGPYILTLEREKFLAEGANLSGYKDRGGK
Ga0187827_1004177543300022227SeawaterMWRRRSNHPGNSQAKGPYILTLERDLFLAEGANLSGKQTEGVKELV
Ga0207921_10324613300025191Deep OceanNWRRRSNHPGNSQAKGPCIITLERRLGLTEGVNLSGNKTEGVD
Ga0207918_10549713300025196Deep OceanWRRRSNHPGNSQAKGPYIITLERRRSLTEGAKLSGNKTDGVF
Ga0207918_13441813300025196Deep OceanENSQRRRSNHLGNFQAKGPYIITLERRLSLTEGVNLSGNKTEGVY
Ga0208059_101871313300025198Deep OceanNHLGNFQAKGPYIITLERRLSLTEGVNLSGNKTEGVY
Ga0208058_101602813300025210Deep OceanNHLGNFQAKGPYIITLERRRSLTEGVNLSGNKTEGVY
Ga0207920_104018813300025215Deep OceanMQRRRSNHPGNSQAKGPYIITLERRLGLTEGVNLSGNKTEGVD
Ga0208335_101697723300025243Deep OceanSNHLGNFQAKGPYIITLERRLSLTEGVNLSGNKTEGVY
Ga0208640_109467223300026208MarineMWRRRSNHPGNSQAKGPYILTLERDLFLAEGANLSGKQTEGVKE
Ga0208522_106801323300026254MarinePYGRDQFYWRRRSNHPGNSQAKGPYIITLESRHSLTEGVNLSGN
Ga0207992_115176613300026263MarineIIYITKCHTYGRDQFDWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGNQTEGV
Ga0208765_116866813300026265MarineYILYGRDQFDWRRRSNHPGNSQAKGPYIITLERRLSLTEGVNLSGN
Ga0208766_101731513300026269MarineNWRRRSNHPGNSQAKGPYIITLERRLCLTEGVNLSGNRTEGAD
Ga0208411_100779113300026279MarineIIYRRKCQTYGRDQFDWRRRSNHPGNSQAKGPYIITLESRHSLTEGVNLSGN
Ga0208764_1016724713300026321MarineWRRRSNHPGNSQAKGPYIITLESRHGLTEGVNLSGN
Ga0209089_1046460813300027838MarineLIRERPIYWRRRSNHPGNSQAKGPYIITLESRRSLTEGINLSGKKTDGV
Ga0209403_1006422813300027839MarineWRRRSNHPGNSQAKGPYIITLERRRSLTEGVNLSGKKTDGV
Ga0209402_1054920123300027847MarineTLIRERPIYWRRRSNHPGNSQAKGPYIITLESRRSLTEGINLSGKKTDGV
Ga0257109_123559813300028487MarineHLGNFQAKGPYIITLERRLSLTEGVNLSGNKTEGVY
Ga0257112_1017671023300028489MarineRRSNHPGNSQAKGPYIITLERRRSLTEGAKLSGNKTEGVF
Ga0310120_1015170123300031803MarineMQRRRSNHPGNSQAKGPCIITLERRLGLTEGINLSGNKTE
Ga0310124_1077751023300031804MarineMQRRRSNHPGNSQAKGPCIITLERRLGLTEGINLSGNKTEGVD
Ga0310344_1021726823300032006SeawaterLQRRRSNHPGNSQAKGPIIMTLERRLSLTEGVNLSGNKTEGA
Ga0310344_1078992313300032006SeawaterQRRRSNHPGNSQAKGPHIITLERRLCLTEGVNLSGN
Ga0315329_1041140023300032048SeawaterRRRSNHPGNSQAKGPYIITLESRHCLTEGVNLSGN
Ga0310345_1094203723300032278SeawaterFDWRRRSKHPGNSQAKGPCIITLESRRKSLTEGVNLSGTRTEGAK


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