Metagenome Family F065906

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065906
Family Type	Metagenome
Number of Sequences	127
Average Sequence Length	105 residues
Representative Sequence	MSEPLTPDEEVVFREYTRLDVEPNQIPVELFEGFLERLANSTNMSVQRARRATQGLIDKGKFDVIEEGKEERIHHEREIIRDLLLHDPEIQELLKKIVAELCATRT
Number of Associated Samples	74
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	81.75 %
% of genes near scaffold ends (potentially truncated)	22.83 %
% of genes from short scaffolds (< 2000 bps)	75.59 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.118 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (25.984 % of family members)
Environment Ontology (ENVO)	Unclassified (28.346 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (32.283 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.46% β-sheet: 0.00% Coil/Unstructured: 42.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF03724	META	6.30
PF01965	DJ-1_PfpI	5.51
PF07441	BofA	4.72
PF05362	Lon_C	3.94
PF01594	AI-2E_transport	2.36
PF08308	PEGA	1.57
PF12724	Flavodoxin_5	1.57
PF03460	NIR_SIR_ferr	1.57
PF05957	DUF883	1.57
PF00005	ABC_tran	0.79
PF00355	Rieske	0.79
PF08714	Fae	0.79
PF13398	Peptidase_M50B	0.79
PF00939	Na_sulph_symp	0.79
PF01061	ABC2_membrane	0.79
PF13508	Acetyltransf_7	0.79
PF02002	TFIIE_alpha	0.79
PF01380	SIS	0.79
PF03807	F420_oxidored	0.79
PF00656	Peptidase_C14	0.79
PF00589	Phage_integrase	0.79
PF01645	Glu_synthase	0.79
PF09376	NurA	0.79
PF00596	Aldolase_II	0.79
PF00174	Oxidored_molyb	0.79
PF01569	PAP2	0.79
PF13489	Methyltransf_23	0.79
PF13426	PAS_9	0.79
PF02852	Pyr_redox_dim	0.79
PF01063	Aminotran_4	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG3187	Heat shock protein HslJ	Posttranslational modification, protein turnover, chaperones [O]	6.30
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	3.94
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	3.94
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	3.94
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	3.94
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	2.36
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.57
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	1.57
COG1675	Transcription initiation factor IIE, alpha subunit	Transcription [K]	0.79
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.79
COG1795	Formaldehyde-activating enzyme (5,6,7,8-tetrahydromethanopterin hydrolyase)	Energy production and conversion [C]	0.79
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.79
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.79
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.79
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.79
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.79
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.79

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
All Organisms	root	All Organisms	44.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
cellular organisms	root	All Organisms → cellular organisms	44.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	40.94 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	37.01 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	33.07 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.36 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	33.07 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	2.36 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	25.98 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	1.57 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	1.57 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	0.79 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Methanoregulaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	18.90 %
Candidatus Buchananbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Buchananbacteria	1.57 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.79 %
Candidatus Gottesmanbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria	0.79 %
Candidatus Methanoperedenaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae	0.79 %
Christensenellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Christensenellaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Methanoregula	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	14.96 %
Candidatus Buchananbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Buchananbacteria	1.57 %
unclassified Christensenellaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Christensenellaceae → unclassified Christensenellaceae	0.79 %
unclassified Methanoregulaceae	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae	0.79 %
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_49_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria → Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_49_10	0.79 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	0.79 %
Candidatus Methanoperedens	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Methanoregula formicica	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	2.36 %
Candidatus Buchananbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Buchananbacteria	1.57 %
Methanoregulaceae archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon	0.79 %
Christensenellaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Christensenellaceae → unclassified Christensenellaceae → Christensenellaceae bacterium	0.79 %
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_49_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria → Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_49_10	0.79 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	0.79 %
Candidatus Methanoperedens	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.12 %
Candidatus Buchananbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Buchananbacteria	1.57 %
Methanoregula formicica SMSP	strain	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica → Methanoregula formicica SMSP	0.79 %
Methanoregulaceae archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon	0.79 %
Christensenellaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Christensenellaceae → unclassified Christensenellaceae → Christensenellaceae bacterium	0.79 %
Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_49_10	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria → Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_49_10	0.79 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	0.79 %
Candidatus Methanoperedens	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000032\|Draft_c0000909	All Organisms → cellular organisms → Archaea → Euryarchaeota	38683	Open in IMG/M
3300000032\|Draft_c0027900	All Organisms → cellular organisms → Archaea → Euryarchaeota	6287	Open in IMG/M
3300000558\|Draft_10012452	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	4659	Open in IMG/M
3300001213\|JGIcombinedJ13530_100757720	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	1004	Open in IMG/M
3300001213\|JGIcombinedJ13530_105631741	Not Available	849	Open in IMG/M
3300001567\|Draft_10000476	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	69999	Open in IMG/M
3300001567\|Draft_10000603	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	60949	Open in IMG/M
3300001580\|Draft_10023792	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	4543	Open in IMG/M
3300001580\|Draft_10183009	Not Available	976	Open in IMG/M
3300001605\|Draft_10400879	Not Available	727	Open in IMG/M
3300002219\|SCADCLC_10112378	Not Available	1191	Open in IMG/M
3300002446\|NAPDCCLC_10000526	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	50740	Open in IMG/M
3300002498\|TOLCLC_10277070	Not Available	500	Open in IMG/M
3300002821\|Iso3TCLC_10011422	Not Available	1994	Open in IMG/M
3300004481\|Ga0069718_14121669	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	688	Open in IMG/M
3300004481\|Ga0069718_15389469	Not Available	933	Open in IMG/M
3300004481\|Ga0069718_15914184	Not Available	1264	Open in IMG/M
3300006224\|Ga0079037_100271765	Not Available	1559	Open in IMG/M
3300006224\|Ga0079037_100441637	All Organisms → cellular organisms → Archaea	1239	Open in IMG/M
3300006224\|Ga0079037_100660100	Not Available	1018	Open in IMG/M
3300006224\|Ga0079037_101098860	Not Available	789	Open in IMG/M
3300006930\|Ga0079303_10057388	Not Available	1391	Open in IMG/M
3300006930\|Ga0079303_10206088	Not Available	788	Open in IMG/M
3300006930\|Ga0079303_10458883	Not Available	546	Open in IMG/M
3300006949\|Ga0075528_10100832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Christensenellaceae → unclassified Christensenellaceae → Christensenellaceae bacterium	761	Open in IMG/M
3300006950\|Ga0075524_10020735	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	2574	Open in IMG/M
3300009037\|Ga0105093_10367664	Not Available	778	Open in IMG/M
3300009053\|Ga0105095_10013170	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	4452	Open in IMG/M
3300009053\|Ga0105095_10102264	Not Available	1555	Open in IMG/M
3300009053\|Ga0105095_10105422	All Organisms → cellular organisms → Archaea → Euryarchaeota	1530	Open in IMG/M
3300009053\|Ga0105095_10259717	Not Available	953	Open in IMG/M
3300009078\|Ga0105106_10031561	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	3919	Open in IMG/M
3300009078\|Ga0105106_10138841	All Organisms → cellular organisms → Archaea → Euryarchaeota	1787	Open in IMG/M
3300009081\|Ga0105098_10000396	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	14722	Open in IMG/M
3300009087\|Ga0105107_10013841	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	5608	Open in IMG/M
3300009091\|Ga0102851_10123668	Not Available	2296	Open in IMG/M
3300009091\|Ga0102851_10223170	All Organisms → cellular organisms → Archaea → Euryarchaeota	1785	Open in IMG/M
3300009091\|Ga0102851_11514413	Not Available	748	Open in IMG/M
3300009111\|Ga0115026_10030528	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	2771	Open in IMG/M
3300009111\|Ga0115026_10123899	Not Available	1620	Open in IMG/M
3300009111\|Ga0115026_10282457	Not Available	1153	Open in IMG/M
3300009111\|Ga0115026_11520691	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	558	Open in IMG/M
3300009120\|Ga0117941_1165633	Not Available	609	Open in IMG/M
3300009146\|Ga0105091_10072877	Not Available	1548	Open in IMG/M
3300009153\|Ga0105094_10340510	Not Available	866	Open in IMG/M
3300009153\|Ga0105094_10914371	Not Available	518	Open in IMG/M
3300009157\|Ga0105092_10181967	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	1172	Open in IMG/M
3300009166\|Ga0105100_10093201	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	1766	Open in IMG/M
3300009168\|Ga0105104_10026764	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	3288	Open in IMG/M
3300009169\|Ga0105097_10021822	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3382	Open in IMG/M
3300009169\|Ga0105097_10319607	Not Available	859	Open in IMG/M
3300009171\|Ga0105101_10475880	Not Available	612	Open in IMG/M
3300009179\|Ga0115028_10019563	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	2886	Open in IMG/M
3300009179\|Ga0115028_10675982	Not Available	784	Open in IMG/M
3300009179\|Ga0115028_10776331	Not Available	742	Open in IMG/M
3300009179\|Ga0115028_10883401	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	705	Open in IMG/M
3300009179\|Ga0115028_12063032	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	505	Open in IMG/M
3300009771\|Ga0116155_10032060	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	2671	Open in IMG/M
3300009838\|Ga0116153_10110960	Not Available	1147	Open in IMG/M
3300010352\|Ga0116247_10214484	Not Available	1587	Open in IMG/M
3300010352\|Ga0116247_10703929	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	757	Open in IMG/M
3300010429\|Ga0116241_10439077	Not Available	1027	Open in IMG/M
3300010429\|Ga0116241_11099003	Not Available	601	Open in IMG/M
3300012931\|Ga0153915_10500296	Not Available	1389	Open in IMG/M
3300012964\|Ga0153916_12783415	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Gottesmanbacteria → Candidatus Gottesmanbacteria bacterium RIFCSPLOWO2_01_FULL_49_10	551	Open in IMG/M
3300014204\|Ga0172381_10885746	Not Available	665	Open in IMG/M
3300014257\|Ga0075319_1007638	Not Available	1518	Open in IMG/M
3300014258\|Ga0075315_1010760	Not Available	1214	Open in IMG/M
3300025715\|Ga0209310_1003941	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	8449	Open in IMG/M
3300025891\|Ga0209585_10015619	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	2742	Open in IMG/M
3300026038\|Ga0208536_1006482	Not Available	829	Open in IMG/M
3300027693\|Ga0209704_1035958	Not Available	1324	Open in IMG/M
3300027713\|Ga0209286_1069862	Not Available	1315	Open in IMG/M
3300027715\|Ga0208665_10029216	Not Available	1522	Open in IMG/M
3300027721\|Ga0209492_1004688	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	4440	Open in IMG/M
3300027723\|Ga0209703_1007662	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	3818	Open in IMG/M
3300027731\|Ga0209592_1013224	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	3061	Open in IMG/M
3300027871\|Ga0209397_10500359	Not Available	603	Open in IMG/M
3300027871\|Ga0209397_10647311	Not Available	530	Open in IMG/M
3300027877\|Ga0209293_10108206	Not Available	1269	Open in IMG/M
3300027885\|Ga0209450_10021573	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3658	Open in IMG/M
3300027885\|Ga0209450_10024353	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica	3475	Open in IMG/M
3300027885\|Ga0209450_10029125	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	3222	Open in IMG/M
3300027885\|Ga0209450_10600948	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	803	Open in IMG/M
3300027890\|Ga0209496_10077006	All Organisms → cellular organisms → Archaea	1362	Open in IMG/M
3300027899\|Ga0209668_10058897	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula → Methanoregula formicica → Methanoregula formicica SMSP	2100	Open in IMG/M
3300027955\|Ga0209078_1016166	Not Available	2127	Open in IMG/M
3300027979\|Ga0209705_10430727	Not Available	653	Open in IMG/M
3300033408\|Ga0316605_10491165	All Organisms → cellular organisms → Archaea	1129	Open in IMG/M
3300033413\|Ga0316603_10143359	All Organisms → cellular organisms → Archaea	1966	Open in IMG/M
3300033413\|Ga0316603_11435857	Not Available	654	Open in IMG/M
3300033418\|Ga0316625_100277316	Not Available	1175	Open in IMG/M
3300033418\|Ga0316625_101531812	Not Available	633	Open in IMG/M
3300033419\|Ga0316601_100423340	All Organisms → cellular organisms → Archaea	1259	Open in IMG/M
3300033419\|Ga0316601_101508209	Not Available	677	Open in IMG/M
3300033419\|Ga0316601_101853190	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	608	Open in IMG/M
3300033433\|Ga0326726_10001862	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	19677	Open in IMG/M
3300033433\|Ga0326726_10015948	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	6544	Open in IMG/M
3300033434\|Ga0316613_11170007	Not Available	530	Open in IMG/M
3300033480\|Ga0316620_10983676	Not Available	820	Open in IMG/M
3300033480\|Ga0316620_12006772	Not Available	575	Open in IMG/M
3300033480\|Ga0316620_12317961	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	534	Open in IMG/M
3300033480\|Ga0316620_12471853	Not Available	517	Open in IMG/M
3300033482\|Ga0316627_100318711	Not Available	1288	Open in IMG/M
3300033482\|Ga0316627_100412972	Not Available	1164	Open in IMG/M
3300033483\|Ga0316629_11811835	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	505	Open in IMG/M
3300033486\|Ga0316624_10140919	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300033486\|Ga0316624_10631715	Not Available	935	Open in IMG/M
3300033486\|Ga0316624_10690586	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Candidatus Methanoperedenaceae → Candidatus Methanoperedens	897	Open in IMG/M
3300033486\|Ga0316624_10710743	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae	885	Open in IMG/M
3300033486\|Ga0316624_11122719	Not Available	713	Open in IMG/M
3300033486\|Ga0316624_11149124	Not Available	705	Open in IMG/M
3300033486\|Ga0316624_11804076	Not Available	566	Open in IMG/M
3300033487\|Ga0316630_10494877	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Buchananbacteria	1000	Open in IMG/M
3300033487\|Ga0316630_12045059	Not Available	527	Open in IMG/M
3300033489\|Ga0299912_10529118	Not Available	944	Open in IMG/M
3300033489\|Ga0299912_11003118	Not Available	622	Open in IMG/M
3300033493\|Ga0316631_10272573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Buchananbacteria	671	Open in IMG/M
3300033513\|Ga0316628_100379876	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula	1789	Open in IMG/M
3300033513\|Ga0316628_102979439	Not Available	620	Open in IMG/M
3300033513\|Ga0316628_103370808	Not Available	579	Open in IMG/M
3300033513\|Ga0316628_104064459	Not Available	522	Open in IMG/M
3300033521\|Ga0316616_102747289	Not Available	663	Open in IMG/M
3300033557\|Ga0316617_102249967	Not Available	563	Open in IMG/M
3300034090\|Ga0326723_0479409	Not Available	570	Open in IMG/M
3300034158\|Ga0370507_0215079	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → unclassified Methanoregulaceae → Methanoregulaceae archaeon	627	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.25%
Engineered	Engineered	15.75%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	45.67%
Terrestrial	Environmental → Terrestrial	38.58%
Wastewater	Engineered → Wastewater	11.81%
Lab Enrichment	Engineered → Lab Enrichment	3.15%
Solid Waste	Engineered → Solid Waste	0.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	43.31%
Soil	Environmental → Terrestrial → Soil	33.07%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	6.30%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	5.51%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.15%
Defined Media	Engineered → Lab Enrichment → Defined Media	3.15%
Peat	Environmental → Terrestrial → Peat	2.36%
Marine	Environmental → Aquatic → Marine	1.57%
Sediment	Environmental → Aquatic → Sediment	0.79%
Landfill	Engineered → Solid Waste → Landfill	0.79%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Sediment	32.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	29.13%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.09%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	6.30%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	5.51%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.15%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	3.15%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	3.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.36%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	32.28%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	29.13%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.09%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	6.30%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	5.51%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.15%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	3.15%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.36%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.57%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	25.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	19.68%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	10.24%
Hydrocarbon Resource Environments	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments	6.30%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	5.51%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	5.51%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	3.15%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	3.15%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.94%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	2.36%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.36%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.36%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.36%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.57%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.57%
Lake Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment	0.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.79%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000032	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered	Open in IMG/M
3300000558	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - West In Pit SyncrudeMLSB2011	Engineered	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001567	Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, Canada	Engineered	Open in IMG/M
3300001580	Wastewater microbial communities from Syncrude, Ft. McMurray, Alberta - Microbes from Suncor taillings pond 6 2012TP6_6	Engineered	Open in IMG/M
3300001605	Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling Basin	Engineered	Open in IMG/M
3300002219	Tailings pond microbial communities from Northern Alberta -Short chain hydrocarbon degrading methanogenic enrichment culture SCADC:	Engineered	Open in IMG/M
3300002446	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered	Open in IMG/M
3300002498	Hydrocarbon resource environments microbial communities from Canada and USA - Toluene degrading community from Alberta, Canada	Engineered	Open in IMG/M
3300002821	Iso-alkanes.Hi.seq-Iso3T	Engineered	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009120	Lake sediment microbial communities from Tanners Lake, St. Paul, MN	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009771	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC032_MetaG	Engineered	Open in IMG/M
3300009838	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC028_MetaG	Engineered	Open in IMG/M
3300010352	AD_JPHWca	Engineered	Open in IMG/M
3300010429	AD_USRAca	Engineered	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014257	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D1	Environmental	Open in IMG/M
3300014258	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D1	Environmental	Open in IMG/M
3300025715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC030_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300026038	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027731	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027955	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033489	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT95D214	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034158	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_000090924	3300000032	Hydrocarbon Resource Environments	MSTPLTPDEDVVFREFLRLDVEPNQIPPELFSGFMERLAESVNLSLQRARIATQGLIDKGVFDVIVEDHEERIHREREIIRDLLLHDPEIQELLKKIVAEICAKKT*
Draft_00279006	3300000032	Hydrocarbon Resource Environments	MSEPLTPDEXVVFREFMRLDVEPNQIPVELYAGFLERLANSCNMSLQRARLATQGLIDKGKFDVIEEGKEERIQNEREIIRDLLLXDXEIQELLKKIVAEMCANKT*
Draft_100124526	3300000558	Hydrocarbon Resource Environments	MDEPLTPDEDVVFRELTRLDVEPNQIPVELFAGFLGRLATSCNLSIPRTRIALQGLIDKGKFDTSEEEKEEHLHHEREIIRDLLLHDPEIQEHLKK
JGIcombinedJ13530_1007577202	3300001213	Wetland	MSEPSPLTPDEDLVFREFLRLDVEPNQIPPELYAGFIEELSRSVNLPLDHVRVATQGLIDKGIFDSGEVGEEGQIHNEREILRDLLLHDPEVQDLLKNIVAELCAKKN*
JGIcombinedJ13530_1056317411	3300001213	Wetland	MDEPLTPDENVVFLEFLRLDVEPNGIPVELFEGFLEKLAASCTMSVQRARIAVQGLIDKGKFDTDEETKDERIQTDREIIKDLILHDMEVRDLLKKIVAEISSDKT*
Draft_1000047618	3300001567	Hydrocarbon Resource Environments	MSEPLTPDEDVVFREFMRLDVEPNQIPVELYAGFLERLANSCNMSLQRARLATQGLIDKGKFDVIEEGKEERIQNEREIIRDLLLHDTEIQELLKKIVAEMCANKT*
Draft_1000060328	3300001567	Hydrocarbon Resource Environments	MRKPLTPDEEVVFREFTHLDVEPNQIPPELFEGFLERLARSSNMSLEHTRHAIQGLIDKGIFDVDEEGKEERIHKDREILRDLLLHDTEIRELLKKLVAEYVQTSRK*
Draft_100237921	3300001580	Hydrocarbon Resource Environments	MDEPLTPDEDVVFRELTRLDVEPNQIPVELFAGFLGRLATSCNLSIPRTRIALQGLIDKGKFDTSEEEKEEHLHHEREIIRDLLLHDPEIQEHLKKIIAKLCSDNK*
Draft_101830092	3300001580	Hydrocarbon Resource Environments	MSTPLTPDEDVVFREFLRLDVEPNQIPPELFSGFMERLAESVNLSLQRARIATQGLIDKGVFDVIVEDHEERIHRERXXIRDLXLHDPEIQDLLKKIVXEXCAKKT*
Draft_104008793	3300001605	Hydrocarbon Resource Environments	LTRLDVEPNQIPVELFAGFLGRLATSCNLSIPRTRIALQGLIDKGKFDTSEEEKEEHLHHEREIIRDLLLHDPEIQEHLKKIIAKLCSDNK*
SCADCLC_101123783	3300002219	Hydrocarbon Resource Environments	MSTPLTPDEDVVFREFLRLDVEPNQIPPELFSGFMERLAESVNLSLQRARIATQGLIDKGVFDVIVEDHEERIHRERETIRDLLLHDPEIQDLLKKIVAELCAKKT*
NAPDCCLC_1000052649	3300002446	Hydrocarbon Resource Environments	MSEPLTPDENVVFREFMRLDVEPNQIPVELYAGFLERLANSCNMSLQRARLATQGLIDKGKFDVIEEGKEERIQNEREIIRDLLLNDTEIQELLKKIVAEMCANKT*
TOLCLC_102770701	3300002498	Hydrocarbon Resource Environments	MSKPLTPDEEVVFRELVRLDVEPHHIPAELFEGFMERLAESSNLPLDRARRAIHGLIDRGIFDAGEEGEEERVQKDREIIRDLLLHDPEIQELLKKIVAEIVQTSLK*
Iso3TCLC_100114221	3300002821	Hydrocarbon Resource Environments	MDEPLTPDEDVVFRELTRLDVEPNQIPVELFAGFLGRLATSCNLSIPRTRIALQGLIDKGKFDTSEEEKEEHLHRERETIRDLLLHDPEIQDLLKKIVAELCAKKT*
Ga0069718_141216691	3300004481	Sediment	MDEPLTPDENVVFSEFLRLDVEPNGIPVELFEGFLERLAASCNMSIQRARVAIQGLINKGKFDAGDETKDERIQTDREIILDLLLHDTEVRGLLKKIVTEISSDKT*
Ga0069718_153894691	3300004481	Sediment	MDVSLKPDEEIVFREFSRLDVEPNQIPVELFAGFLERLASSCNISLPRARIALQGLIDTGIFDSTLEEKEERIHEEREIIRDLLLHDPEIRGLLKTMVAEFCPDRK*
Ga0069718_159141842	3300004481	Sediment	MTESLPPDEDTVFRELNRLDVEPNQIPPELFEGFLEQLANGCNLSLQRTRAALQGLIDKGKFDVIEEGKEERIQNEREILRDLLLNDPEIRELIREIASDKKSKTP*
Ga0079037_1002717652	3300006224	Freshwater Wetlands	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFMEQLAKSCNMSIHRARIATQRLIDKGKFDVVEEGKEERIHHDREIIRDLLLHDPEIQELLKKIVADLYATRT*
Ga0079037_1004416372	3300006224	Freshwater Wetlands	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFLEQLAKSCNMSVHRARIATQGLIDKGKFDVVYEGKEERIHHEREIIRDLLLHDPEI
Ga0079037_1006601003	3300006224	Freshwater Wetlands	MTESLTPDEDTVFRELTRLDVEPNQIPPELFEGFLEQLANGCNLSLQRTRAALQGLIDKGKFDVIEEGKEERIQNEREILRDLLLNDPEIRELIREIASDKKSKTP*
Ga0079037_1010988602	3300006224	Freshwater Wetlands	MSEPLTPDEEVVFREYTRLDVEPNQIPVELFEGFLERLANSTNMSVQRARRATQGLIDKGKFDVIEEGKEVRIHHEREIIRDLLLHDPEIQE
Ga0079303_100573882	3300006930	Deep Subsurface	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFLEQLAKSCNMSVHRARIATQGLIDKGKFDVVYEGKEERIHHEREIIRDLLLHDPEIRELLKKIVTDLNATGFK*
Ga0079303_102060882	3300006930	Deep Subsurface	MNESLTPDEDTVFRELARLDVEPNQIPPELFEGFLEQLANGCNLSLQRTRAALQGLIDKGIFDVIEEGKEERIQNEREILRDLLLNDPEIRELIREIASDKKSKTP*
Ga0079303_104588832	3300006930	Deep Subsurface	RLDVEPNQIPPELFEGFMEQLAKSCNMSIHRARIATQRLIDKGKFDVVEEGKEERIHQEREIIRDLLLHDPEIQDLLKKIVADLYATRT*
Ga0075528_101008321	3300006949	Arctic Peat Soil	MDEPLTPDEDVVFLEFLRLDVEPNGIPVELFAGFLEELAASCNMSLQRARVATQGLIDKGKFDVVEEKKDDRIQTDREIIIDLLLHDPEVRELLKKIVAEISPDKT
Ga0075524_100207352	3300006950	Arctic Peat Soil	MDESLPLTPDEDVVFREFTCLDVEPNQIPPELFMGFLERLAKACNMSLQRVRAATQGLIDKGKFDVVEDTEQERIQTDREIIRDLLLHDPEIRELLKKIVAEVSVK*
Ga0105093_103676642	3300009037	Freshwater Sediment	MSGPLAPDEEVVFREFTRLDVEPNQIPAELFEGFLERLARSSSMSLERTRRAIQGLIDKGIFDVAEEGKEERIHKEREIIHDLFLHDTEIQELLKKIV
Ga0105095_100131701	3300009053	Freshwater Sediment	VDLWYLNEEVVFREFTRLDVEPNQIPAEFFEGFLERLARSSSMSLERTRRAIQGLIDKGIFDVAEEGKEERIHKEREIIHDLLLHDMEIQELLKKIVAEYVQTSLK*
Ga0105095_101022642	3300009053	Freshwater Sediment	MSEPLTPDEDVVFRELTHLDVEPHHIPAELFEGFLERLAGSGNLPIDRARRAIQGLIDKGLFDVDEEGKEERVEKDREIIRDLLLHDPEIQELLKKIVAEIVQTSFK*
Ga0105095_101054221	3300009053	Freshwater Sediment	MTTPLTPDEDVVFREFLRLDVEPNGIPAEIFEGFLERLANSCNMSLQRARLATQGLIDKAKFDVIEEGKEERIQYEREIIRDLLLHDPEIQEMFKKMIAERCKPK*
Ga0105095_102597172	3300009053	Freshwater Sediment	MSEPLAPDEDVVFREFTHLDIEPNQIPAELFEGFLERLARSSSMSVESTPRAIQGLIDQGIFDVAEEGKEERIHKERKIIRDLLLHDTEMLELLKKLVAEYVQTSLK*
Ga0105106_100315613	3300009078	Freshwater Sediment	MSEPLTPDEDVVFRELTHLDVEPHHIPAELFEGFLERLAGSGNLPIDRARRAIQGLIDKGLFDVDEEGKESRVEKDREIIRDLLLHDPEIQELLKKIVAEIVQTSFK*
Ga0105106_101388411	3300009078	Freshwater Sediment	MTTPLTPDEDVVFREFLRLDVEPNGIPAEIFEGFLERLANSCNMSLQRARLATQGLIDKGKFDVIEEGKEERIQHEREIIRDLLLHDPEIQEMFKKMIAERCKPK*
Ga0105098_1000039612	3300009081	Freshwater Sediment	MSEPLAPDEEVVFREFTRLDVEPNQIPAELFEGFLERLARSSGMSPERTRRAIQGLIDKGIFDVDEEGKEVRKHKEREIIRDLLLHDTEIEELLKRLVAEYVQTSRK*
Ga0105107_100138414	3300009087	Freshwater Sediment	MSEPLAPDEDVVFREFTHLDIEPNQIPAELFEGFLERLARSSSMSVESTPRAIQGLIDQGIFDVAEEGKEERIHKEREIIRDLLLHDTEMLELLKKLVAEYVQTSLK*
Ga0102851_101236685	3300009091	Freshwater Wetlands	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFMEQLAKSCNMSIHRARIATQRLIDKGKFDVVEEGKEERIHQEREIIRDLLLHDPEIQDLLKKIVADLYATRT*
Ga0102851_102231703	3300009091	Freshwater Wetlands	MSEPLTPDEEVVFREYTRLDVEPNQIPVELFEGFLERLARSCNMSLQRARTATLGLIDKGKFDVIEEGKEERIHMDREIIRDLLLHDPEIQELLKKIVTEICATRT*
Ga0102851_115144132	3300009091	Freshwater Wetlands	MSTPLTPDEDLVFREFLRLDVEPNQIPPELFAGFMERLAESVRLSLQRARIATQGLIDKGVFDDIVEDHDERTHREREIIRNLLLHDKEIQELLKKIVAEICAKKR*
Ga0115026_100305284	3300009111	Wetland	MKKERRIPMDEPLTPDEDVVFRELTRLDVEPNQIPVELFAGFLGRLATSCNLSIPRTRIALQGLIDKGKFDTSEEEKEENLHHEREIFRDLILHDPEIQEHLKKIVAELCA
Ga0115026_101238993	3300009111	Wetland	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFLEQLAKSCNMSIHRARIATQRLIDKGKFDVVEEGTEERIHHDREIIRDLLLHDPEIQELLKKIVADLYATRT*
Ga0115026_102824572	3300009111	Wetland	LTPDEEVVFREYTRLDVEPNQIPPELFEGFLERLATSLNMSIQRARHATQGLIDKGKFDVIEVGKEERILHEREIIRDLLLHDPEIQELLKKIVAEICAART*
Ga0115026_115206912	3300009111	Wetland	MDEPLTPDEDVVYQEFTRLDVEPNQIPPDLYAGFLERLAETCNLSLPRARTAIQGLIDKGIFDDPAEGKEEHIQTEREIILDLLLHDPEIRELLKKIVAEISVNKTQ*
Ga0117941_11656331	3300009120	Lake Sediment	MREPLAPDEEVVFREFIRLDVEPNQIPAELFEGFLERLARSSSMSLERTRRAIQGLIDKGIFDIDEEGKEERIHKDREILRDLLLNDTEIRELLKKLVAEYVQTSRK*
Ga0105091_100728773	3300009146	Freshwater Sediment	MSEPLAPDEEVVFREFTRLDVEPNQIPAELFEGFLERLARSSGMSPERTRRAIQGLIDKGIFDVDEEGKEVRIHKEREIIRDLRLHDTEIEELLKRLVAEYVQTSRK*
Ga0105094_103405101	3300009153	Freshwater Sediment	VDLWYLNEEVVFREFTRLDVEPNQIPAEFFEGFLERLARSSSMSLERTRRAIQGLIDKGIFDVAEEGKEERIHKEREIIHDLFLHDTEIQELLKKIVAEYVQTSLK*
Ga0105094_109143711	3300009153	Freshwater Sediment	MSEPLAPDEDVVFREFTHLDIEPNQIPAELFEGFLERLARSSSMSVESTPRAIQGLIDQGIFDVAEEGKEERIHKERKIIRDLLLHDTEML
Ga0105092_101819671	3300009157	Freshwater Sediment	MNESLTSDEDVVFRELTRLDVEPNQIPVELFEGFLKRLAGSCNMPVGRARRALQGLIDKGKFDVIEEGAEGRIQNEREIILDLLLHDAELRELLKKIVAEM
Ga0105100_100932012	3300009166	Freshwater Sediment	MSEPLTPDEDVVFRELTHLDVEPHHIPAELFEWFLERLAGSGNLPIDRARRAIQGLIDKGLFDVDEEGKESRVEKDREIIRDLLLHDPEIQELLKKIVAEIVQTSFK*
Ga0105104_100267645	3300009168	Freshwater Sediment	VFREFTHLDIEPNQIPAELFEGFLERFARSSSMPLERTRRAVQGLIDKGIFDVAEEGKEERIHKERKIIRDLLLHDTEMLELLKKLVAEYVQTSLK*
Ga0105097_100218221	3300009169	Freshwater Sediment	MSEPLAPDEEVVFREFTRLDVEPNQIPAELFEGFLERLARSSGMSPERTRRAIQGLIDKGIFDVDEEGKEVRIHKEREIIRDLLLHDTEIEELLKRLVAEYVQTSRK*
Ga0105097_103196071	3300009169	Freshwater Sediment	LAPDEEVVLREFTRLDVEPNQIPAELFEGFLERLARSFSMSLESTRRAIQGLIDKGIFDVTEEGKEERIHKEREILRDLLLHDTEIQELLKKLVAE*
Ga0105101_104758802	3300009171	Freshwater Sediment	MTTPLTPNEDVVFREFLRLDVEPNGIPAEIFEGFLERLANSCNMSLQRARLATQGLIDKGKFDVIEEGKEERIQYEREIIRDLLLHDPEIQEMFKKMIAERCKPK*
Ga0115028_100195632	3300009179	Wetland	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFMEQLAKSCNMSIHRARIATQRLIDKGKFDVAEEGKEERIHQEREIIRELLLHDPEIQDLLKKIVADLYATRT*
Ga0115028_106759822	3300009179	Wetland	MNESLTPDEDTVFRELARLDVEPNQIPPELFEGFLEQLANGCNLSLQRTRAALQGLIDKGKFDVIEEGKEERIHNEREILRDLLLNDPEIRELIREIASDKKSKTP*
Ga0115028_107763312	3300009179	Wetland	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFLEQLAKSCNMSVHRARIATQGLIDKGKFDVVYEGKEERIHHEREIIRDLLLHDPEIRELLKKIVAELCETRT*
Ga0115028_108834012	3300009179	Wetland	MDEPLAPDEDVVFRELTRLDVEPHQIPVELFAGFLGRLATSCNLSIPRTRIALQGLIDKGKFDTSEEEKEENLHHEREIFRDLILHDPEIQEHLKKIVAELCADKN*
Ga0115028_120630321	3300009179	Wetland	MDEPLTPDEDVVYREFLRLDVEPNQIPPDLYAGFLERLAETCNISLQRARIAIQGLIDKGIFDVVDEGNMERMQTDREIILDLLLHDPEIREL
Ga0116155_100320602	3300009771	Anaerobic Digestor Sludge	MDEPLTPDEDVVFREFTRLDVEPNAIPVELFAGFLERLAASCNISLQRARVATQGLIDKGKFDASEMTEEERIFNEREILRELLLHDPEIREVVKKIVAELVADKVS*
Ga0116153_101109601	3300009838	Anaerobic Digestor Sludge	MDEPLTPDEDVVFREFTRLDVEPNAIPVELFAGFLERLAASCNISLQRARVATQGLIDKGKFDASEMTEEERIFNEREILRELLLLDPEIREVVKKIVAELVADKVS*
Ga0116247_102144842	3300010352	Anaerobic Digestor Sludge	MDIPLKPDEEIVFREFSRLDVEPNQIPVELFAGFVERLASACNISVPRARSAIQGLIDKGIFDSTPEIQEERVHQEREIIRDLLLHDPEIRELLKTMVAELCPDRT*
Ga0116247_107039291	3300010352	Anaerobic Digestor Sludge	MDEPLTPDEDVVFRELTRLDVEPNQIPVELFAGFMERLADTSNMSVPRARLALQGLIDKGKFDTSDAGIEERIQSERNIIRDLLLHDPEIRELLKKIVADFCADKS*
Ga0116241_104390772	3300010429	Anaerobic Digestor Sludge	MDEPLTPDEDVVFRELTRLDVEPNQIPVELFAGFLGRLATSCNLSIPRTRIALQGLIDKGKFDTSEEEMEENLHHEREIFRDLILHDPEIQEHLKKIVAELCADKN*
Ga0116241_110990031	3300010429	Anaerobic Digestor Sludge	MDEPLTPDEDRVYREFLRLDVEPNQIPVELYNGFMERLAGSCAMSVQRARIATQGLIDKGIFDTIDEGIEDPVRNEREIIRDLLLHDPEVQEMIRKIVEKTCAAKGREVS*
Ga0153915_105002961	3300012931	Freshwater Wetlands	MSEPLTPDEEVVFREYTRLDVEPNQIPVELFEGFLERLASSLNMSIQRARRATQGLIDKGKFDVTEEGKEERIHHEREIIRDLLLHDPEIQDLLKKIVVEICDTRTK*
Ga0153916_127834151	3300012964	Freshwater Wetlands	MSEPLTPDEERVFQEYTRLDVEPNQIPVELFEGFLERLATSCNMSLQRARIATQGLIDKGKFDVIVEGKEERIQMEREIIRDLLLHDTEIQDLLKKIVAEICTARTK*
Ga0172381_108857461	3300014204	Landfill Leachate	MNESLTPDEDVVFREFTRLDVEPNQIPVELYAGFLERLANSCNMSLQRARLATQGLIDKGKFDVIEEGKEERIQNEREIIRDLLLNDTEIQELLKKIVAEMCANKT*
Ga0075319_10076381	3300014257	Natural And Restored Wetlands	MSGKKERYMTMSEPLPLTPDEDVVFREFIRLDVEPNHIPPELFVGFLERLAKEVDIPLQRVRVATQGLIDKGKFDAVDAGNEERIHHEREIIRDLLLHDPEIRDLLKNIVAEMNANKT*
Ga0075315_10107601	3300014258	Natural And Restored Wetlands	MTKSEPLPLTPDEDVVFREFIRLDVEPNHIPPELFVGFLERLAKEVDIPLQRARVATQGLIDKGKFDAVDAGNEERIHHEREIIRDLLLHDPEIRDLLKNIVAEMNANKT*
Ga0209310_10039418	3300025715	Anaerobic Digestor Sludge	MDEPLTPDEDVVFREFTRLDVEPNAIPVELFAGFLERLAASCNISLQRARVATQGLIDKGKFDASEMTEEERIFNEREILRELLLHDPEIREVVKKIVAELVADKVS
Ga0209585_100156195	3300025891	Arctic Peat Soil	MDESLPLTPDEDEVFREFTCLDVEPNQIPPELFMGFLERLAKACNMSLQRVRAATQGLIDKGKFDVVEDTEQERIQTDREIIRDLLLHDPEIRELLKKIVAEVSVK
Ga0208536_10064821	3300026038	Natural And Restored Wetlands	MTMSEPLPLTPDEDVVFREFIRLDVEPNHIPPELFVGFLERLAKEVDIPLQRVRVATQGLIDKGKFDAVDAGNEERIHHEREIIRDLLLHDPEIRDLLK
Ga0209704_10359582	3300027693	Freshwater Sediment	MSEPLAPDEDVVFREFTHLDIEPNQIPAELFEGFLERLARSSSMSVESTPRAIQGLIDQGIFDVAEEGKEERIHKERKIIRDLLLHDTEMLELLKKLVAEYVQTSLK
Ga0209286_10698622	3300027713	Freshwater Sediment	MSEPLTPDEDVVFRELTHLDVEPHHIPAELFEGFLERLAGSGNLPIDRARRAIQGLIDKGLFDVDEEGKESRVEKDREIIRDLLLHDPEIQELLKKIVAEIVQTSFK
Ga0208665_100292163	3300027715	Deep Subsurface	SYNLLCGKKKRGVPMSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFMEQLAKSCNMSIHRARIATQRLIDKGKFDVVEEGKEERIHQEREIIRDLLLHDPEIQDLLKKIVADLYATRT
Ga0209492_10046883	3300027721	Freshwater Sediment	MSEPLAPDEEVVFREFTRLDVEPNQIPAELFEGFLERLARSSGMSPERTRRAIQGLIDKGIFDVDEEGKEVRIHKEREIIRDLLLHDTEIEELLKRLVAEYVQTSRK
Ga0209703_10076621	3300027723	Freshwater Sediment	PLAPDEDVVFREFTHLDIEPNQIPAELFEGFLERLARSSSMSLERTRRAIQGLIDKGIFDVAEEGKEERIHKEREIIHDLLLHDMEIQELLKKIVAEYVQTSLK
Ga0209592_10132242	3300027731	Freshwater Sediment	VDLWYLNEEVVFREFTRLDVEPNQIPAEFFEGFLERLARSSSMSLERTRRAIQGLIDKGIFDVAEEGKEERIHKEREIIHDLLLHDMEIQELLKKIVAEYVQTSLK
Ga0209397_105003591	3300027871	Wetland	LARLDVEPNQIPPELFEGFLEQLAKSCNMSIHRARIATQRLIDKGKFDVVEEGKEERIHQEREIIRDLLLHDPEIQDLLKKIVADLYATRT
Ga0209397_106473111	3300027871	Wetland	MNESLTPDEDTVFRELARLDVEPNQIPPELFEGFLEQLANGCNLSLQRTRAALQGLIDKGIFDVIEEGKEERIQNEREILRDLLLNDPEIRELIREIASDKKSKTP
Ga0209293_101082062	3300027877	Wetland	MTESLTPDEDTVFRELTRLDVEPNQIPPELFEGFLEQLANGCNLSLQRTRAALQGLIDKGKFDVIEEGKEERIQNEREILRDLLLNDPEIRELIREIASDKKSKTP
Ga0209450_100215734	3300027885	Freshwater Lake Sediment	MDEPLTPDEDVVFRELTRLDVEPNQIPVELFAGFLGRLATSCNLSIPRTRIALQGLIDKGKFDTSEEEKEEHLHHEREIFRDLILHDPEIQEHLKKIVAELCADKK
Ga0209450_100243533	3300027885	Freshwater Lake Sediment	MKNESLTPDEDTVFHELTRLDVEPNQIPPELFEGFLERLANACNLSLQRTRVAIQGLIDKGKFDVIEEGKEERIQNEREILRDLLLNDPEIRELIREIASDKKSKTP
Ga0209450_100291252	3300027885	Freshwater Lake Sediment	MDEPLTPDEDVVYREFIRLEVEPNQIPPDLYAGFLKRLAETCHLSLPRTRIAIQGLIDKGIFDASDEGKELQIQTEREIILDLLLHDPEIRELKKNCC
Ga0209450_106009481	3300027885	Freshwater Lake Sediment	MDEPLTPDEDVVYREFTRLDVEPNQIPPDLYAGFLERLAETCNLSLPRARTAIQGLIDKGIFDVPEEGKEEQIQTEREIILDLLLHDPKIRELLKKIVAEISVNKTQ
Ga0209496_100770062	3300027890	Wetland	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFMEQLAKSCNMSIHRARIATQRLIDKGKFDVAEEGKEERIHQEREIIRELLLHDPEIQDLLKKIVADLYATRT
Ga0209668_100588972	3300027899	Freshwater Lake Sediment	MSGKIEKDILMNESLTPDEDTVFRELTRLDVEPNQIPPELFEGFLERLANGCNLSLQRTRAALQGLIDKGKFDVIEEGKEERIQNEREILRDLLLNDPEIRELIREIASDKKSKTP
Ga0209078_10161662	3300027955	Freshwater Sediment	VDLWYLNEEVVFREFTRLDVEPNQIPAEFFEGFLERLARSSSMSLERTRRAIQGLIDKGIFDVAEEGKEERIHKEREIIHDLFLHDTEIQELLKKIVAEYVQTSLK
Ga0209705_104307272	3300027979	Freshwater Sediment	LDVEPNQIPAEFFEGFLERLARSSSMSLERTRRAIQGLIDKGIFDVAEEGKEERIHKEREIIHDLLLHDMEIQELLKKIVAEYVQTSLK
Ga0316605_104911651	3300033408	Soil	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFLEQLAKSCNMSVHRARIATQGLIDKGKFDVVYEGKEERIHHEREIIRDLLLHDPEIRELLKKIVTDLNATGFK
Ga0316603_101433592	3300033413	Soil	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFLEQLAKSCNMSIHRARIATQRLIDKGKFDVVEEGTEERIHHDREIIRDLLLHDPEIQELLKKIVADLYATRT
Ga0316603_114358571	3300033413	Soil	EDTVFRELTRLDVEPNQIPPELFEGFLERLAHGCNLSLQRTRAALQGLIDKGKFDVIEEGKEERIHNEREILRDLLLNDPEIRELIREIASDKKSKTP
Ga0316625_1002773162	3300033418	Soil	MSEPLTPDEDVVFREFTRLDVEPNQIPPELFEGFLEQLAKSCNMSIHRARIATQRLIDKGKFDVVEEGTEERIHHEREIIRDLLLHDPEIQELLKKIVADLYATRT
Ga0316625_1015318121	3300033418	Soil	MDEPLTPDEDVVLSEFLRLDVEPNGIPVELFEGFLEKLAASCNMSVQRARIAIQGLIDKGKFDAPEEAKDERIPTDREIIKDLLMHDTEVRELLKKIVAEISSDKKK
Ga0316601_1004233402	3300033419	Soil	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFMEQLAKSCNMSIHRARIATQRLIDKGKFDVVEEGKEERIHQEREIIRDLLLHDPEIQDLLKKIVADLYATRT
Ga0316601_1015082092	3300033419	Soil	MTESLTPDEDTVFRELTRLDVEPNQIPPELFEGFLEQLANGCNLSLQRTRAALQGLIDKGIFDVIEEGKEERIQNEREILRDLLLNDPEIRELIREIASDKKSKTP
Ga0316601_1018531901	3300033419	Soil	MDEPLTPDEDVVYREFTRLDVEPNQIPPDLYAGFLERLAETCNLSLPRARTAIQGLIDKGIFDDPAEGKEEHIQTEREIILDLLLHDPEIRELLKKIVAEISVNKTQ
Ga0326726_100018623	3300033433	Peat Soil	LGKEEREVIPESESSTPDEDVVFREFTCLDVEPDQVPAELFAGFLERLANSCNMSLERAGQATLRLIEKGKFDVIEEGKEERIQNERGIIRDLLLHDTEIQELLKKIVAELCADMT
Ga0326726_100159486	3300033433	Peat Soil	MSEPLPLTPDEDVVFREYIRLDVEPNQIPPELFVGFLERLARSVNMSLQRVRVATQGLIDKGKFDTVDEGKEVRIINEREIIRDLLLHDPEIQELLKTIVAEMFANKT
Ga0316613_111700071	3300033434	Soil	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFLEQLAKSCNMSVHRARIATQGLIDKGKFDVVYEGKEERIHHEREIIRDLLLHDPEIRDLLKKIVADLNATGFT
Ga0316620_109836762	3300033480	Soil	MSGSLAPDEEVVFREFTRLDVEPNQIPAELFEGFLEQLARSSSMSLERTCRAIQGLIDKEIFDVNEEGKEERIHKEREIIRDLLLHDTEIQELLKKIVAEYVQTSLK
Ga0316620_119948671	3300033480	Soil	VEPNQIPPELFEGFLERLAKSCNLSIHRARIATQRLIDKGKFDVVEEGKEERIHHEREIIRDLLLHDPEIQELLKKIVADLYATRT
Ga0316620_120067721	3300033480	Soil	MAMSESLTPDEDVVFREFTRLDVEPNQIPAELFAGFLERLANSCNMSLQRARQATLGLIEKGKFDVIEEGKEERIQNEREIIRDLLLHDTEIQELLKKIVAEMCANKT
Ga0316620_123179611	3300033480	Soil	MDEPLTPDEDVVYREFLRLDVEPNQIPPDLYAGFLERLAETCNISLQRARIAIQGLIDKGIFDVVDEGNMERMQTDREIILDLLLHDPEIR
Ga0316620_124718531	3300033480	Soil	MREPLAPDEEVVFREFIRLDVEPNQIPAELFEGFLERLARSSSMSLERTRRAIQGLIDKGIFDIDEEGKEERIHKDREILRDLLLNDTEIRELLKKLVAEYVQTSRK
Ga0316627_1003187112	3300033482	Soil	MSEPLTPDEEVVFREYTRLDVEPNQIPVELFEGFLERLANSTNMSVQRARRATQGLIDKGKFDVIEEGKEERIHHEREIIRDLLLHDPEIQELLKKIVAELCATRT
Ga0316627_1004129722	3300033482	Soil	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFLERLAKSCNMSIHRARIATQRLIDKGKFDVVEEGKEERIHQEREIIRDLLLHDPEIQELLKKIVADLYATRT
Ga0316629_118118351	3300033483	Soil	MDEPLTPDEEVVFSEFLRLDVEPNGIPVELFEGFLEKLAASCTMSLPRARIAIQGLIDKGKFDAPEETKDERIQTDREIIKDLLMHDSEVRELLKKIIAELSSDKK
Ga0316624_101409193	3300033486	Soil	MSEPLTPDEEVVFREYTRLDVEPNQIPVELFEGFLERLASSLNISIQRARRATQGLIDKGKFDVIEEGKEERIRHEREIIRDLLLHDPEIQDLLKKIVAEICDTRTK
Ga0316624_106317152	3300033486	Soil	MSEPLPLTPDEDVVFREFLRLDVEPNQIPPELFLGFLERLARSVGMSLPRVRSATQGLIDKGKFDVVEEGPEERIHNEREIIRDLLLHDQEIQELLKKIVQECMRTGPG
Ga0316624_106905862	3300033486	Soil	MSEPLTPDEDVVLREFTRLDVEPNQIPAELYAGFLERLAGSCNMSLQRARLATQGLIDKGIFDVIEEGKEEKIQNEREIIRDLLLHDPEIQEHLKKIVADLCKDRK
Ga0316624_107107432	3300033486	Soil	MSEPLTPDEDVVFREFSRLDVEPNQIPAELYAGFLEKLAKSCNMSLQRARLATQGLIDKGIFDVIEEGKEERVQNEREIIRDLLLHDPEIQEHLKKIVADFCKDKK
Ga0316624_111227192	3300033486	Soil	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFLEQLAKSCNMSIHRARIATQRLIDKGKFDVVEEGKEERIHQEREIIRDLLVHDPEIRELLKKIVAELCETRT
Ga0316624_111491242	3300033486	Soil	MIEPVPLTPDEDVVFREFVRLDVEPNQIPPELFVGFLERLAASVNMSLPRVRSATQGLIDKGKFDTIEEGSEERIHNEREIIRDLLLHDPEIQELLKNMVRECIRTGLR
Ga0316624_118040761	3300033486	Soil	MSEPLPLTPDEEVVFHEFVRLDVEPNQIPPELFIGFLERLSRSVGMSLPRVRSATQGLIDKGKFDVVEEGPEERLHNEREIVRDLLLHDPEIRELLKDIVRECMRTGPGITR
Ga0316630_104948771	3300033487	Soil	MSEPLTPDEEVVFREYTRLDVEPNQIPVELFEGFLERLANSTNMSVQRARRATQGLIDKGKFDVIEEGKEVRIHHEREIIRDLLLHDPEIQELLKKIFAELCATRT
Ga0316630_120450592	3300033487	Soil	MNESLTPDEDTVFRELARLDVEPNQIPPELFEGFLEQLANGCNLSLQRTRAALQGLIDKGKFDVIEEGKEERIQNEREILRDLLLNDPEIRELIREIASDKKSKTP
Ga0299912_105291182	3300033489	Soil	MSEPLAPDEEVVFHEFTRLDVEPNQIPAELFEGFLERLATSSSMSLERTRRAIQGLIDKGIFDVAEEGKEERIHKEREIIRDLLLHDTEIQELLRKLVAEYVQTSRK
Ga0299912_110031181	3300033489	Soil	MSKPLAPDEEVVFREFTRLDVEPNQIPAELFEGFLERLATSSSMSLERTRRAIQGLIDKGIFDVDEEGKEVRIHKEREIIRDLLLHDTEIQELLKKLVAEYVQTSRK
Ga0316631_102725731	3300033493	Soil	DEEVVFREYTRLDVEPNQIPPELFEGFLERLATSLTMSIQRARHATQGLIDKGKFDVIEEGKEERILHEREIIRDLLLHDPEIQELLKKIVAEICAART
Ga0316628_1003798763	3300033513	Soil	KKGKTMREPLAPDEEVVFREFTRLDVEPNQIPAELFEGFLERLARSSGMSLERTRHAIQGLIDKGIFDVAEEGIEERIHKEREIIRDLFLHDREIQELLKKLVAEYVQTSLK
Ga0316628_1029794391	3300033513	Soil	MREPLAPDEEVVFREFIRLDVEPNQIPAELFEGFLERLARSSSMSLERTRRAIQGLIDKGIFDIDEEGKEERIHKDREILRDLLLNDTEIRELLKKLIAEYVQTSRK
Ga0316628_1033708081	3300033513	Soil	MSEPLTPDEEVVFREFTRLDVEPNQIPPELFEGFLERLAKSCNMSIHRARIATQRLIDKGKFDVVEEGKEERIHQEREIIRDLLVHDPEIRELLKKIVAELCETRT
Ga0316628_1040644592	3300033513	Soil	MDEPLTPDEDVVLSEFLRLDVEPNGIPVELFEGFLEKLAASCTMSVQRARIAIQGLIDKGKFDAPEETKDERMQTDREIIKDLIMHDSEVRELLKKIVAELSSDKK
Ga0316616_1027472891	3300033521	Soil	LRLDVEPNGIPVELFEGFLERLAASCNMSVQRARIAIQGLIDKGKFDSAEETKDDRIHTDREIIKDLLLHDAEVRELLKKIVAEISSDKT
Ga0316617_1022499671	3300033557	Soil	FTRLDVEPNQIPPELFEGFLEQLAKSCNMSVHRARIATQGLIDKGKFDVVYEGKEERIHHEREIIRDLLLHDPEIRELLKKIVTDLNATGFK
Ga0326723_0479409_2_268	3300034090	Peat Soil	MSEPLPLTPDEDVVFREYIRLDVEPNQIPPELFVGFLERLARSVNMSLQRVRVATQGLIDKGKFDTVDEGKEVRIINEREIIRDLLLHD
Ga0370507_0215079_31_354	3300034158	Untreated Peat Soil	MDDPLTPDENVVFLEFLRLDVEPNGIPVELFEGFLERLAASCNMSVQRARVASQGLIDKGKFDAEEEIKDERIQADREIFMDLLRHDPEVRDLLKKIVALLAVFEGF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065906

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences