Sample 3300001423

Overview

Basic Information
IMG/M Taxon OID	3300001423 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0084162 \| Gp0056266 \| Ga0003485
Sample Name	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	62919518
Sequencing Scaffolds	32
Novel Protein Genes	35
Associated Families	32

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia mimosarum	1
All Organisms → cellular organisms → Bacteria	5
All Organisms → cellular organisms → Bacteria → Acidobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2
Not Available	10
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Dechloromonas → unclassified Dechloromonas → Dechloromonas sp.	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Carboxydothermus → Carboxydothermus hydrogenoformans	1
All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae → Leishmaniinae → Leishmania → Leishmania → Leishmania major species complex → Leishmania major	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil → Arctic Peat Soil Microbial Communities From The Barrow Environmental Observatory Site, Barrow, Alaska, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	polar biome → polar → peat soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Barrow Environmental Observatory site, Barrow, Alaska
Coordinates	Lat. (^o)	71.2999	Long. (^o)	-156.61	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F000769	Metagenome / Metatranscriptome	898	Y
F002347	Metagenome / Metatranscriptome	568	Y
F003796	Metagenome / Metatranscriptome	468	Y
F004527	Metagenome / Metatranscriptome	434	Y
F005246	Metagenome / Metatranscriptome	407	Y
F008098	Metagenome / Metatranscriptome	339	Y
F009222	Metagenome / Metatranscriptome	321	Y
F009620	Metagenome / Metatranscriptome	315	Y
F012266	Metagenome / Metatranscriptome	282	Y
F012729	Metagenome / Metatranscriptome	278	Y
F014308	Metagenome / Metatranscriptome	264	Y
F014548	Metagenome / Metatranscriptome	262	Y
F022432	Metagenome / Metatranscriptome	214	Y
F025185	Metagenome	203	Y
F030934	Metagenome	184	Y
F031302	Metagenome / Metatranscriptome	183	Y
F032019	Metagenome / Metatranscriptome	181	Y
F037489	Metagenome / Metatranscriptome	168	Y
F050579	Metagenome / Metatranscriptome	145	Y
F055310	Metagenome / Metatranscriptome	139	Y
F056184	Metagenome	138	Y
F056988	Metagenome	137	Y
F063034	Metagenome	130	Y
F077977	Metagenome	117	Y
F079371	Metagenome	116	Y
F085859	Metagenome	111	Y
F094575	Metagenome	106	Y
F097858	Metagenome / Metatranscriptome	104	Y
F098281	Metagenome	104	Y
F100041	Metagenome	103	N
F104110	Metagenome / Metatranscriptome	101	N
F104112	Metagenome / Metatranscriptome	101	N

Family

Category

Number of Sequences

3D Structure?

F000769

Metagenome / Metatranscriptome

898

F002347

Metagenome / Metatranscriptome

568

F003796

Metagenome / Metatranscriptome

468

F004527

Metagenome / Metatranscriptome

434

F005246

Metagenome / Metatranscriptome

407

F008098

Metagenome / Metatranscriptome

339

F009222

Metagenome / Metatranscriptome

321

F009620

Metagenome / Metatranscriptome

315

F012266

Metagenome / Metatranscriptome

282

F012729

Metagenome / Metatranscriptome

278

F014308

Metagenome / Metatranscriptome

264

F014548

Metagenome / Metatranscriptome

262

F022432

Metagenome / Metatranscriptome

214

F025185

Metagenome

203

F030934

Metagenome

184

F031302

Metagenome / Metatranscriptome

183

F032019

Metagenome / Metatranscriptome

181

F037489

Metagenome / Metatranscriptome

168

F050579

Metagenome / Metatranscriptome

145

F055310

Metagenome / Metatranscriptome

139

F056184

Metagenome

138

F056988

Metagenome

137

F063034

Metagenome

130

F077977

Metagenome

117

F079371

Metagenome

116

F085859

Metagenome

111

F094575

Metagenome

106

F097858

Metagenome / Metatranscriptome

104

F098281

Metagenome

104

F100041

Metagenome

103

F104110

Metagenome / Metatranscriptome

101

F104112

Metagenome / Metatranscriptome

101

Scaffold	Taxonomy	Length	IMG/M Link
JGI20199J14953_1001150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia mimosarum	2670	Open in IMG/M
JGI20199J14953_1001212	All Organisms → cellular organisms → Bacteria	2587	Open in IMG/M
JGI20199J14953_1001379	All Organisms → cellular organisms → Bacteria	2417	Open in IMG/M
JGI20199J14953_1001843	All Organisms → cellular organisms → Bacteria → Acidobacteria	2093	Open in IMG/M
JGI20199J14953_1001895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	2064	Open in IMG/M
JGI20199J14953_1001949	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
JGI20199J14953_1002095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1961	Open in IMG/M
JGI20199J14953_1002291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1874	Open in IMG/M
JGI20199J14953_1002303	Not Available	1871	Open in IMG/M
JGI20199J14953_1002572	Not Available	1760	Open in IMG/M
JGI20199J14953_1002852	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
JGI20199J14953_1002888	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1649	Open in IMG/M
JGI20199J14953_1003655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1449	Open in IMG/M
JGI20199J14953_1004191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1337	Open in IMG/M
JGI20199J14953_1004648	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1259	Open in IMG/M
JGI20199J14953_1005112	All Organisms → cellular organisms → Bacteria	1191	Open in IMG/M
JGI20199J14953_1008211	Not Available	901	Open in IMG/M
JGI20199J14953_1009647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	823	Open in IMG/M
JGI20199J14953_1012853	Not Available	704	Open in IMG/M
JGI20199J14953_1014441	Not Available	663	Open in IMG/M
JGI20199J14953_1014944	Not Available	652	Open in IMG/M
JGI20199J14953_1015217	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
JGI20199J14953_1015350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	644	Open in IMG/M
JGI20199J14953_1016959	Not Available	614	Open in IMG/M
JGI20199J14953_1019712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Dechloromonas → unclassified Dechloromonas → Dechloromonas sp.	571	Open in IMG/M
JGI20199J14953_1020277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Dechloromonas → unclassified Dechloromonas → Dechloromonas sp.	563	Open in IMG/M
JGI20199J14953_1021139	Not Available	552	Open in IMG/M
JGI20199J14953_1021703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Carboxydothermus → Carboxydothermus hydrogenoformans	546	Open in IMG/M
JGI20199J14953_1023246	All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae → Leishmaniinae → Leishmania → Leishmania → Leishmania major species complex → Leishmania major	529	Open in IMG/M
JGI20199J14953_1024306	Not Available	517	Open in IMG/M
JGI20199J14953_1025406	Not Available	506	Open in IMG/M
JGI20199J14953_1025527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	505	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

JGI20199J14953_1001150

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia mimosarum

2670

Open in IMG/M

JGI20199J14953_1001212

All Organisms → cellular organisms → Bacteria

2587

Open in IMG/M

JGI20199J14953_1001379

All Organisms → cellular organisms → Bacteria

2417

Open in IMG/M

JGI20199J14953_1001843

All Organisms → cellular organisms → Bacteria → Acidobacteria

2093

Open in IMG/M

JGI20199J14953_1001895

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales

2064

Open in IMG/M

JGI20199J14953_1001949

All Organisms → cellular organisms → Bacteria

2034

Open in IMG/M

JGI20199J14953_1002095

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei

1961

Open in IMG/M

JGI20199J14953_1002291

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

1874

Open in IMG/M

JGI20199J14953_1002303

Not Available

1871

Open in IMG/M

JGI20199J14953_1002572

Not Available

1760

Open in IMG/M

JGI20199J14953_1002852

All Organisms → cellular organisms → Bacteria

1660

Open in IMG/M

JGI20199J14953_1002888

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria

1649

Open in IMG/M

JGI20199J14953_1003655

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria

1449

Open in IMG/M

JGI20199J14953_1004191

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium

1337

Open in IMG/M

JGI20199J14953_1004648

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

1259

Open in IMG/M

JGI20199J14953_1005112

All Organisms → cellular organisms → Bacteria

1191

Open in IMG/M

JGI20199J14953_1008211

Not Available

901

Open in IMG/M

JGI20199J14953_1009647

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium

823

Open in IMG/M

JGI20199J14953_1012853

Not Available

704

Open in IMG/M

JGI20199J14953_1014441

Not Available

663

Open in IMG/M

JGI20199J14953_1014944

Not Available

652

Open in IMG/M

JGI20199J14953_1015217

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium

646

Open in IMG/M

JGI20199J14953_1015350

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia

644

Open in IMG/M

JGI20199J14953_1016959

Not Available

614

Open in IMG/M

JGI20199J14953_1019712

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Dechloromonas → unclassified Dechloromonas → Dechloromonas sp.

571

Open in IMG/M

JGI20199J14953_1020277

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Azonexaceae → Dechloromonas → unclassified Dechloromonas → Dechloromonas sp.

563

Open in IMG/M

JGI20199J14953_1021139

Not Available

552

Open in IMG/M

JGI20199J14953_1021703

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae → Carboxydothermus → Carboxydothermus hydrogenoformans

546

Open in IMG/M

JGI20199J14953_1023246

All Organisms → cellular organisms → Eukaryota → Discoba → Euglenozoa → Kinetoplastea → Metakinetoplastina → Trypanosomatida → Trypanosomatidae → Leishmaniinae → Leishmania → Leishmania → Leishmania major species complex → Leishmania major

529

Open in IMG/M

JGI20199J14953_1024306

Not Available

517

Open in IMG/M

JGI20199J14953_1025406

Not Available

506

Open in IMG/M

JGI20199J14953_1025527

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium

505

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
JGI20199J14953_1001150	JGI20199J14953_10011501	F004527	MPQPRARCQQELFQEPPAVPAVRLPLDVQQQLRQALVQWMQALAKMIREEDDDEQHHR*
JGI20199J14953_1001212	JGI20199J14953_10012121	F012729	MEVWLAHHGRTGLTPEDRVILLPRFQRLARDAGSVAALSRDFVGELERT*
JGI20199J14953_1001379	JGI20199J14953_10013791	F037489	LVAEYEAXGXSXVEFCXXXGLSLATLARYRKRQTQGSPAAGNRWVEVKESAGRPALGIPASSGLAVALPSGRRIEIGRGFDAHTLAQLLDVLERP*
JGI20199J14953_1001843	JGI20199J14953_10018435	F030934	VADPAYAIPSPDLPALTVRWEGLVVAIDATTLNTIARKATRNVPEVREILIEPEDGRLGLTVRIKKGIPVAFRGHIESMRFKDGFLGFTITDLRVFGVVSIPNWVLTKIVERQPEGRAFFYPEERIVVVNLNGILPPELSVQVKDVVCENGEMRFVFGPSQYRLDRVIAEMGRDPFEDD*
JGI20199J14953_1001895	JGI20199J14953_10018952	F003796	MKKSSADYSSLELQRQSFLQQLSGLRQLRRGSLTEQFLWVKRKDGSRVKRGPYPLLTRKEGQKTVSLRLTDPELVPVYRRQIQAMRQFETVVDQLARAGERLSDLAVAEVVQKKTAGGTGAKCRGASAGPRAVGPADA*
JGI20199J14953_1001949	JGI20199J14953_10019493	F055310	MVGESRAPNGIFRMSDHLGVGEGQRYPRSRVMPVEGRTLASGVLKKKERSGDWR*
JGI20199J14953_1002095	JGI20199J14953_10020953	F104112	DSLRAVMWQIAMGVVSKTDENGNFIVEAFGQPNMKMARHFLEWQRPEKWGKRRKRHVPHNAGVLVIGGDVTKKPEYDTTASVKARKWKSFSRKFREAKT*
JGI20199J14953_1002291	JGI20199J14953_10022914	F063034	MALIRFLDGKERGKTTTVHDAAIRGEGRYRFKKRELTKKGGRTYYLKFVAKKRWADKKVPEWTAALDDDLAD*
JGI20199J14953_1002303	JGI20199J14953_10023032	F025185	MHIEQLPSVGEVVSALETQGQRLSDADLVGASRSALTSARDALPDGWTHRRRASRWPWVACAILGTTILGLVFLTPAFRRWAASRRASGRPDGVMGDATQAPAMSAADEMGDLVYPAESDALDTAPLLDGGADN*
JGI20199J14953_1002572	JGI20199J14953_10025722	F097858	MSTRQTICAIERAAAKADPAATLILGTLLLLTRP*
JGI20199J14953_1002852	JGI20199J14953_10028523	F014548	LVGCGHVSGLLMRQVWPLALMLCADRVPIVRPHLKVR*
JGI20199J14953_1002888	JGI20199J14953_10028883	F056988	VGEAEDIPLFFTLIPVLALLSNYDQGNCLINVGTEGQLR
JGI20199J14953_1003655	JGI20199J14953_10036551	F012266	ALALQLPICFEVRALSGGLVSSTPERPCDDMCGLDPLSGEPDGDAADFLD*
JGI20199J14953_1004191	JGI20199J14953_10041911	F094575	MTILVSVFGFAGRFAGDLLTSALGWASSLLFGRVPRSHQVFLVLMMAGSFLWFVLLLALVLPIVSSTLLAATPHPPFVDQAWLAAVLLLGVILVPLGVGFAGYLVPSQGERPQGAAILVEIVRGYLLAPLIGGLLIFLAGVGIARKVR
JGI20199J14953_1004648	JGI20199J14953_10046481	F002347	MNPPDKTRLLQQIAAISAMERGTLSEYTFKERSAASGPYHKLQHWREGKNHTRYVSTEELPAVQAALAGYAQYRQLTKQYADVVIEETRQQIAGSKKKKPHRKSSWPGKKKSSN*
JGI20199J14953_1005112	JGI20199J14953_10051122	F098281	MAPDPESSRACFLCGFPASVGGEEPLFASSFRGHSVDCEECGPYAVTAEAIHRLEVRPISRPGVRFEIFRLRSNGHTPRPTVDLKMVEHFCTGYTPMRG*
JGI20199J14953_1006096	JGI20199J14953_10060962	F014308	MSIGSIGVQVITPQTGTSPQTRPQSQANERERIQPVDPKLAPPPPGMGKFVDKTA*
JGI20199J14953_1007165	JGI20199J14953_10071651	F104110	MYLGKDVTTEDSMELGKVSDVSISSSGEVYYLVEKGKDPNIRYYFTQEDVLASNERVVTRSVGEFTDDIAKRSHFLCALYGVEVRDTTNNRVGVLDNFVASPQGALVVIEDAKGTALVGRYRDLDLTRLSKFAILKQLPAQDSFDEYLKDINRDTLLTKGISCDLSSVAKDEGLLSRIRK
JGI20199J14953_1007755	JGI20199J14953_10077551	F104110	SRRRHFKYSSLLTPPVLGEDNLSLHAYPSAGKTEGGTMYLGKDVTTEDDMELGKVSDVSISSSGEVYYLVEKGEDPNIRYYFTQEDVLTSNERVVARSVGEFTDDTAKRSHFLCALYGVEVRDATNKRVGVLDNFVASPEGALVVIEDAKGNALVGRYRDLDLTRLSKFAILKQLPAQDSFDEYLKDINRDALLTKGISCDLSSVAKDEGLLSRIRKKLAQSEEDRIITDQALID*
JGI20199J14953_1008211	JGI20199J14953_10082112	F085859	MKDGKTGEHKPKEPSFLTGQEALIYEIERACGQLNKLKGLQLNEPLFRAVAAEIRAHMDHLGLSLIE
JGI20199J14953_1009647	JGI20199J14953_10096472	F008098	MRFILGIIVGAALLLGSAYLHDTGVIKAGPKEAFVNWNTVMGMLGK*
JGI20199J14953_1012853	JGI20199J14953_10128532	F056184	DLIMHEYVGPLGQVAERVPPPARSWAFAVNSTVDFSDIEITLLSFVVVGKFARVTGLVRIRSRPNVRLASVPKLSLATADGSPLALLSAHVLPHGDMAWVSWLYQRPPDVLTEYEGRIDRVDLDHHVGGRVPRPHEPQPGAWVFRFRLPPAPVASRMIAALAD*
JGI20199J14953_1014441	JGI20199J14953_10144413	F100041	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYELGIDE
JGI20199J14953_1014944	JGI20199J14953_10149442	F100041	MALHDDADAYRQVKDAWRDATEARQIIMLDDLRDLLDGIGFADDDEYELREKVERLITEIEDDLGIDESGL*
JGI20199J14953_1015217	JGI20199J14953_10152171	F022432	VSPAVWSTVSPGPIVVNGQNAVTNPISGTQKFYRLSQ*
JGI20199J14953_1015350	JGI20199J14953_10153502	F031302	MSSSTASAAHQDRPEINPDLQDVVHTVHHEFDEKLDPQAVDECLGRVAAQFDEATVRSFV
JGI20199J14953_1016959	JGI20199J14953_10169593	F077977	MPAETAIVVAGIAVVFAAFPIAPGWAAFYTRNVRTPGASYFDK*
JGI20199J14953_1019712	JGI20199J14953_10197122	F005246	MKQAQAVESFLAGRRVVLAKFVAHRYKEVSNKAKKVVGIVNLYEVQCADGKAPTVQMWCPRNVQTVEQAAKECPCQFKDGQKVVVEFDLMEPNTFD
JGI20199J14953_1020277	JGI20199J14953_10202772	F005246	MKQQQAVESFLAGRRVVLAKFVAHHYKEVSNKAKKVVGIVNLYEVQCADGKAPTVQVWCPRSVQTVEQATKDCPCTFKEGQKLVIEFDSMEPNTFDAKNGVIIR
JGI20199J14953_1021139	JGI20199J14953_10211391	F009222	MARAPMKLHVKKNQLHKDVGKAPGXKITEADIAKEKSKGGVYAKRAQFAENAKKWNHPGKGKR*
JGI20199J14953_1021703	JGI20199J14953_10217031	F000769	VRADSFKGDRPSCPYGCSAKMHGHGWYWRYLARGKKDIQFAVHRFLCPECGHTVSVLPVARLTYRPIEVDRLQAYFDGQAKVSSGLDPPPGTIEAGCLQRAWKRFLTRVNRLKDAFGQMLPAELEGAEQLWKELRRTVGSAEDILRFLARNCNCSLLGDYACLRPAS*
JGI20199J14953_1023246	JGI20199J14953_10232461	F050579	MKKQPDKTPVESLRDAYKVSGFRVHARVDSYDELEHPAFVVTLVRRSKKRCAASAGRFAAAFTTNAGDGRAILDAAIGTSISIFRCVA*
JGI20199J14953_1024306	JGI20199J14953_10243061	F079371	TRLARLVRIVTLPETRGLIVAAAHSETLRDIGQRAVHDRAALVRDLRNPANARGLVRSAARHPAARELASAGLLFLPVRYLPVGWAATWVARRVLRRHVDPPADVLDAPAFEASQPLENGIPGAPEM*
JGI20199J14953_1025406	JGI20199J14953_10254061	F032019	MQREYAIRQIAKREGFSLEKHGEDSYRLINERLNVIVFGLDGVPLETIASFLEKPESLAN
JGI20199J14953_1025527	JGI20199J14953_10255271	F009620	RRRKTCDGTWQMSLRTDSAHAATAIVMALEAWMKTATPGEKFDMTEPPSEAFDRQEVIVLMGESQGGQKQKFLPIIRSGNKKFFGFGDSNMPSLDKIEGRFAQILPPKVADDQMRLLAKTMLKVKGVKTAKPGARAELTDPSRKKYYAEFLREHFTVQDAATTPFDLA

Scaffold ID

Protein ID

Family

Sequence

JGI20199J14953_1001150

JGI20199J14953_10011501

F004527

MPQPRARCQQELFQEPPAVPAVRLPLDVQQQLRQALVQWMQALAKMIREEDDDEQHHR*

JGI20199J14953_1001212

JGI20199J14953_10012121

F012729

MEVWLAHHGRTGLTPEDRVILLPRFQRLARDAGSVAALSRDFVGELERT*

JGI20199J14953_1001379

JGI20199J14953_10013791

F037489

LVAEYEAXGXSXVEFCXXXGLSLATLARYRKRQTQGSPAAGNRWVEVKESAGRPALGIPASSGLAVALPSGRRIEIGRGFDAHTLAQLLDVLERP*

JGI20199J14953_1001843

JGI20199J14953_10018435

F030934

VADPAYAIPSPDLPALTVRWEGLVVAIDATTLNTIARKATRNVPEVREILIEPEDGRLGLTVRIKKGIPVAFRGHIESMRFKDGFLGFTITDLRVFGVVSIPNWVLTKIVERQPEGRAFFYPEERIVVVNLNGILPPELSVQVKDVVCENGEMRFVFGPSQYRLDRVIAEMGRDPFEDD*

JGI20199J14953_1001895

JGI20199J14953_10018952

F003796

MKKSSADYSSLELQRQSFLQQLSGLRQLRRGSLTEQFLWVKRKDGSRVKRGPYPLLTRKEGQKTVSLRLTDPELVPVYRRQIQAMRQFETVVDQLARAGERLSDLAVAEVVQKKTAGGTGAKCRGASAGPRAVGPADA*

JGI20199J14953_1001949

JGI20199J14953_10019493

F055310

MVGESRAPNGIFRMSDHLGVGEGQRYPRSRVMPVEGRTLASGVLKKKERSGDWR*

JGI20199J14953_1002095

JGI20199J14953_10020953

F104112

DSLRAVMWQIAMGVVSKTDENGNFIVEAFGQPNMKMARHFLEWQRPEKWGKRRKRHVPHNAGVLVIGGDVTKKPEYDTTASVKARKWKSFSRKFREAKT*

JGI20199J14953_1002291

JGI20199J14953_10022914

F063034

MALIRFLDGKERGKTTTVHDAAIRGEGRYRFKKRELTKKGGRTYYLKFVAKKRWADKKVPEWTAALDDDLAD*

JGI20199J14953_1002303

JGI20199J14953_10023032

F025185

MHIEQLPSVGEVVSALETQGQRLSDADLVGASRSALTSARDALPDGWTHRRRASRWPWVACAILGTTILGLVFLTPAFRRWAASRRASGRPDGVMGDATQAPAMSAADEMGDLVYPAESDALDTAPLLDGGADN*

JGI20199J14953_1002572

JGI20199J14953_10025722

F097858

MSTRQTICAIERAAAKADPAATLILGTLLLLTRP*

JGI20199J14953_1002852

JGI20199J14953_10028523

F014548

LVGCGHVSGLLMRQVWPLALMLCADRVPIVRPHLKVR*

JGI20199J14953_1002888

JGI20199J14953_10028883

F056988

VGEAEDIPLFFTLIPVLALLSNYDQGNCLINVGTEGQLR

JGI20199J14953_1003655

JGI20199J14953_10036551

F012266

ALALQLPICFEVRALSGGLVSSTPERPCDDMCGLDPLSGEPDGDAADFLD*

JGI20199J14953_1004191

JGI20199J14953_10041911

F094575

MTILVSVFGFAGRFAGDLLTSALGWASSLLFGRVPRSHQVFLVLMMAGSFLWFVLLLALVLPIVSSTLLAATPHPPFVDQAWLAAVLLLGVILVPLGVGFAGYLVPSQGERPQGAAILVEIVRGYLLAPLIGGLLIFLAGVGIARKVR

JGI20199J14953_1004648

JGI20199J14953_10046481

F002347

MNPPDKTRLLQQIAAISAMERGTLSEYTFKERSAASGPYHKLQHWREGKNHTRYVSTEELPAVQAALAGYAQYRQLTKQYADVVIEETRQQIAGSKKKKPHRKSSWPGKKKSSN*

JGI20199J14953_1005112

JGI20199J14953_10051122

F098281

MAPDPESSRACFLCGFPASVGGEEPLFASSFRGHSVDCEECGPYAVTAEAIHRLEVRPISRPGVRFEIFRLRSNGHTPRPTVDLKMVEHFCTGYTPMRG*

JGI20199J14953_1006096

JGI20199J14953_10060962

F014308

MSIGSIGVQVITPQTGTSPQTRPQSQANERERIQPVDPKLAPPPPGMGKFVDKTA*

JGI20199J14953_1007165

JGI20199J14953_10071651

F104110

MYLGKDVTTEDSMELGKVSDVSISSSGEVYYLVEKGKDPNIRYYFTQEDVLASNERVVTRSVGEFTDDIAKRSHFLCALYGVEVRDTTNNRVGVLDNFVASPQGALVVIEDAKGTALVGRYRDLDLTRLSKFAILKQLPAQDSFDEYLKDINRDTLLTKGISCDLSSVAKDEGLLSRIRK

JGI20199J14953_1007755

JGI20199J14953_10077551

F104110

SRRRHFKYSSLLTPPVLGEDNLSLHAYPSAGKTEGGTMYLGKDVTTEDDMELGKVSDVSISSSGEVYYLVEKGEDPNIRYYFTQEDVLTSNERVVARSVGEFTDDTAKRSHFLCALYGVEVRDATNKRVGVLDNFVASPEGALVVIEDAKGNALVGRYRDLDLTRLSKFAILKQLPAQDSFDEYLKDINRDALLTKGISCDLSSVAKDEGLLSRIRKKLAQSEEDRIITDQALID*

JGI20199J14953_1008211

JGI20199J14953_10082112

F085859

MKDGKTGEHKPKEPSFLTGQEALIYEIERACGQLNKLKGLQLNEPLFRAVAAEIRAHMDHLGLSLIE

JGI20199J14953_1009647

JGI20199J14953_10096472

F008098

MRFILGIIVGAALLLGSAYLHDTGVIKAGPKEAFVNWNTVMGMLGK*

JGI20199J14953_1012853

JGI20199J14953_10128532

F056184

DLIMHEYVGPLGQVAERVPPPARSWAFAVNSTVDFSDIEITLLSFVVVGKFARVTGLVRIRSRPNVRLASVPKLSLATADGSPLALLSAHVLPHGDMAWVSWLYQRPPDVLTEYEGRIDRVDLDHHVGGRVPRPHEPQPGAWVFRFRLPPAPVASRMIAALAD*

JGI20199J14953_1014441

JGI20199J14953_10144413

F100041

MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYELGIDE

JGI20199J14953_1014944

JGI20199J14953_10149442

F100041

MALHDDADAYRQVKDAWRDATEARQIIMLDDLRDLLDGIGFADDDEYELREKVERLITEIEDDLGIDESGL*

JGI20199J14953_1015217

JGI20199J14953_10152171

F022432

VSPAVWSTVSPGPIVVNGQNAVTNPISGTQKFYRLSQ*

JGI20199J14953_1015350

JGI20199J14953_10153502

F031302

MSSSTASAAHQDRPEINPDLQDVVHTVHHEFDEKLDPQAVDECLGRVAAQFDEATVRSFV

JGI20199J14953_1016959

JGI20199J14953_10169593

F077977

MPAETAIVVAGIAVVFAAFPIAPGWAAFYTRNVRTPGASYFDK*

JGI20199J14953_1019712

JGI20199J14953_10197122

F005246

MKQAQAVESFLAGRRVVLAKFVAHRYKEVSNKAKKVVGIVNLYEVQCADGKAPTVQMWCPRNVQTVEQAAKECPCQFKDGQKVVVEFDLMEPNTFD

JGI20199J14953_1020277

JGI20199J14953_10202772

F005246

MKQQQAVESFLAGRRVVLAKFVAHHYKEVSNKAKKVVGIVNLYEVQCADGKAPTVQVWCPRSVQTVEQATKDCPCTFKEGQKLVIEFDSMEPNTFDAKNGVIIR

JGI20199J14953_1021139

JGI20199J14953_10211391

F009222

MARAPMKLHVKKNQLHKDVGKAPGXKITEADIAKEKSKGGVYAKRAQFAENAKKWNHPGKGKR*

JGI20199J14953_1021703

JGI20199J14953_10217031

F000769

VRADSFKGDRPSCPYGCSAKMHGHGWYWRYLARGKKDIQFAVHRFLCPECGHTVSVLPVARLTYRPIEVDRLQAYFDGQAKVSSGLDPPPGTIEAGCLQRAWKRFLTRVNRLKDAFGQMLPAELEGAEQLWKELRRTVGSAEDILRFLARNCNCSLLGDYACLRPAS*

JGI20199J14953_1023246

JGI20199J14953_10232461

F050579

MKKQPDKTPVESLRDAYKVSGFRVHARVDSYDELEHPAFVVTLVRRSKKRCAASAGRFAAAFTTNAGDGRAILDAAIGTSISIFRCVA*

JGI20199J14953_1024306

JGI20199J14953_10243061

F079371

TRLARLVRIVTLPETRGLIVAAAHSETLRDIGQRAVHDRAALVRDLRNPANARGLVRSAARHPAARELASAGLLFLPVRYLPVGWAATWVARRVLRRHVDPPADVLDAPAFEASQPLENGIPGAPEM*

JGI20199J14953_1025406

JGI20199J14953_10254061

F032019

MQREYAIRQIAKREGFSLEKHGEDSYRLINERLNVIVFGLDGVPLETIASFLEKPESLAN

JGI20199J14953_1025527

JGI20199J14953_10255271

F009620

RRRKTCDGTWQMSLRTDSAHAATAIVMALEAWMKTATPGEKFDMTEPPSEAFDRQEVIVLMGESQGGQKQKFLPIIRSGNKKFFGFGDSNMPSLDKIEGRFAQILPPKVADDQMRLLAKTMLKVKGVKTAKPGARAELTDPSRKKYYAEFLREHFTVQDAATTPFDLA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300001423: Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences