Metagenome Family F056988

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056988
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	42 residues
Representative Sequence	VGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEG
Number of Associated Samples	90
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.21 %
% of genes near scaffold ends (potentially truncated)	93.43 %
% of genes from short scaffolds (< 2000 bps)	70.80 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.642 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (24.817 % of family members)
Environment Ontology (ENVO)	Unclassified (48.905 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.934 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.06% β-sheet: 0.00% Coil/Unstructured: 60.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF01527	HTH_Tnp_1	9.49
PF13683	rve_3	7.30
PF00665	rve	3.65
PF05592	Bac_rhamnosid	3.65
PF13751	DDE_Tnp_1_6	2.19
PF13378	MR_MLE_C	2.19
PF00078	RVT_1	1.46
PF00689	Cation_ATPase_C	1.46
PF01676	Metalloenzyme	1.46
PF02518	HATPase_c	0.73
PF00128	Alpha-amylase	0.73
PF13242	Hydrolase_like	0.73
PF07676	PD40	0.73
PF01272	GreA_GreB	0.73
PF01695	IstB_IS21	0.73
PF04964	Flp_Fap	0.73
PF01061	ABC2_membrane	0.73
PF03796	DnaB_C	0.73
PF01850	PIN	0.73
PF00561	Abhydrolase_1	0.73
PF12840	HTH_20	0.73
PF12704	MacB_PCD	0.73
PF00121	TIM	0.73
PF04014	MazE_antitoxin	0.73
PF02899	Phage_int_SAM_1	0.73
PF00176	SNF2-rel_dom	0.73
PF09285	Elong-fact-P_C	0.73
PF03625	DUF302	0.73
PF14103	DUF4276	0.73
PF00702	Hydrolase	0.73
PF03781	FGE-sulfatase	0.73
PF04255	DUF433	0.73
PF01804	Penicil_amidase	0.73
PF13091	PLDc_2	0.73
PF00023	Ank	0.73
PF03734	YkuD	0.73
PF00772	DnaB	0.73
PF01661	Macro	0.73
PF04055	Radical_SAM	0.73
PF05565	Sipho_Gp157	0.73
PF08531	Bac_rhamnosid_N	0.73
PF00005	ABC_tran	0.73
PF13620	CarboxypepD_reg	0.73
PF00135	COesterase	0.73
PF02698	DUF218	0.73
PF04655	APH_6_hur	0.73
PF14384	BrnA_antitoxin	0.73
PF08388	GIIM	0.73
PF00271	Helicase_C	0.73
PF04389	Peptidase_M28	0.73
PF13784	Fic_N	0.73
PF00589	Phage_integrase	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG4584	Transposase	Mobilome: prophages, transposons [X]	3.65
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	3.65
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	3.65
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	3.65
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	3.65
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	1.46
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	1.46
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.73
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.73
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.73
COG3570	Streptomycin 6-kinase	Defense mechanisms [V]	0.73
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.73
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.73
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.73
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	0.73
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.73
COG0149	Triosephosphate isomerase	Carbohydrate transport and metabolism [G]	0.73
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.73
COG2110	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	Translation, ribosomal structure and biogenesis [J]	0.73
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.73
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.73
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.73
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.73
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.73
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.64 %
Unclassified	root	N/A	23.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.64 %
Unclassified	root	N/A	23.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.64 %
Unclassified	root	N/A	23.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	21.90 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	6.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.36 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.49 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	8.03 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.11 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4.38 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.36 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8.03 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	7.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.11 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	3.65 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	2.19 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.73 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.36 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	6.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.11 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.65 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.19 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.19 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.73 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.11 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	4.38 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.65 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	2.19 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.19 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.19 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	1.46 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.73 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.11 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.65 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	2.19 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.19 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.19 %
Desulfobacca	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca	1.46 %
unclassified Candidatus Solibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter	0.73 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.73 %
Verrucomicrobium	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.11 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.65 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.19 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.19 %
Desulfobacca acetoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	1.46 %
Candidatus Sulfopaludibacter sp. SbA6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	1.46 %
unclassified Verrucomicrobium	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium	0.73 %
Candidatus Solibacter sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	0.73 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.73 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.11 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.65 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3.65 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	2.19 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.19 %
Desulfobacca acetoxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	1.46 %
Candidatus Sulfopaludibacter sp. SbA6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	1.46 %
Verrucomicrobium sp. GAS474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	0.73 %
Candidatus Solibacter sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	0.73 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.73 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.73 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10138525	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	943	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10017073	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300000955\|JGI1027J12803_103536211	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300001396\|JGI20175J14863_1024484	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300001423\|JGI20199J14953_1002888	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1649	Open in IMG/M
3300001453\|JGI20197J15136_1003792	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1719	Open in IMG/M
3300001870\|JGI24129J20441_1038590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1144	Open in IMG/M
3300002066\|JGIcombinedJ21911_10037979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1690	Open in IMG/M
3300006795\|Ga0075520_1447062	Not Available	513	Open in IMG/M
3300006854\|Ga0075425_100371897	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	1646	Open in IMG/M
3300009029\|Ga0066793_10320642	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300009029\|Ga0066793_10646783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	601	Open in IMG/M
3300009094\|Ga0111539_10136975	All Organisms → cellular organisms → Bacteria → Proteobacteria	2867	Open in IMG/M
3300009523\|Ga0116221_1005205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8148	Open in IMG/M
3300009523\|Ga0116221_1020926	All Organisms → cellular organisms → Bacteria → Proteobacteria	3431	Open in IMG/M
3300009523\|Ga0116221_1103638	Not Available	1256	Open in IMG/M
3300009523\|Ga0116221_1119814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1155	Open in IMG/M
3300009523\|Ga0116221_1128625	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300009523\|Ga0116221_1555985	Not Available	504	Open in IMG/M
3300009524\|Ga0116225_1074051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	1601	Open in IMG/M
3300009524\|Ga0116225_1142816	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300009524\|Ga0116225_1490581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300009525\|Ga0116220_10161035	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300009630\|Ga0116114_1141341	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300009639\|Ga0116122_1167611	Not Available	695	Open in IMG/M
3300009641\|Ga0116120_1253080	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300009672\|Ga0116215_1380417	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300009683\|Ga0116224_10161902	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1076	Open in IMG/M
3300009700\|Ga0116217_10338563	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Desulfobacca → Desulfobacca acetoxidans	962	Open in IMG/M
3300009700\|Ga0116217_10599762	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300009824\|Ga0116219_10061782	All Organisms → cellular organisms → Bacteria → Acidobacteria	2208	Open in IMG/M
3300009824\|Ga0116219_10089716	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300009824\|Ga0116219_10106811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1632	Open in IMG/M
3300009839\|Ga0116223_10035406	All Organisms → cellular organisms → Bacteria → Proteobacteria	3358	Open in IMG/M
3300009839\|Ga0116223_10248550	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1073	Open in IMG/M
3300010379\|Ga0136449_100921733	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300010379\|Ga0136449_101159325	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300012913\|Ga0157298_10191835	Not Available	648	Open in IMG/M
3300014160\|Ga0181517_10008268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	8500	Open in IMG/M
3300014160\|Ga0181517_10043323	Not Available	2820	Open in IMG/M
3300014162\|Ga0181538_10109596	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300014164\|Ga0181532_10022613	All Organisms → cellular organisms → Bacteria → Proteobacteria	4519	Open in IMG/M
3300014164\|Ga0181532_10113472	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300014200\|Ga0181526_10119798	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300014489\|Ga0182018_10198501	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300014490\|Ga0182010_10081678	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1593	Open in IMG/M
3300014491\|Ga0182014_10028854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4352	Open in IMG/M
3300014491\|Ga0182014_10344627	Not Available	754	Open in IMG/M
3300014494\|Ga0182017_10191996	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300014494\|Ga0182017_10278296	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300014494\|Ga0182017_10355560	Not Available	911	Open in IMG/M
3300014494\|Ga0182017_10943295	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300014495\|Ga0182015_10212522	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300014496\|Ga0182011_10190436	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300014496\|Ga0182011_11016168	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300014498\|Ga0182019_10248082	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300014502\|Ga0182021_10171744	Not Available	2528	Open in IMG/M
3300014502\|Ga0182021_10384094	All Organisms → cellular organisms → Bacteria	1664	Open in IMG/M
3300014502\|Ga0182021_10417784	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1592	Open in IMG/M
3300014502\|Ga0182021_10825314	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300014839\|Ga0182027_10042180	All Organisms → cellular organisms → Bacteria → Proteobacteria	5801	Open in IMG/M
3300014839\|Ga0182027_10581385	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300014839\|Ga0182027_11201659	Not Available	762	Open in IMG/M
3300014839\|Ga0182027_11541148	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300014839\|Ga0182027_11874046	Not Available	578	Open in IMG/M
3300014839\|Ga0182027_11999364	Not Available	555	Open in IMG/M
3300015360\|Ga0163144_10135293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3712	Open in IMG/M
3300015360\|Ga0163144_11420976	Not Available	616	Open in IMG/M
3300016294\|Ga0182041_10099907	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2128	Open in IMG/M
3300017988\|Ga0181520_10000264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	115835	Open in IMG/M
3300017988\|Ga0181520_10083719	Not Available	2804	Open in IMG/M
3300017988\|Ga0181520_10595803	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300018017\|Ga0187872_10356253	Not Available	627	Open in IMG/M
3300018020\|Ga0187861_10030582	Not Available	3044	Open in IMG/M
3300018037\|Ga0187883_10433969	Not Available	674	Open in IMG/M
3300019082\|Ga0187852_1395409	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300020057\|Ga0163151_10063383	All Organisms → cellular organisms → Bacteria → Acidobacteria	2584	Open in IMG/M
3300020083\|Ga0194111_10409032	Not Available	896	Open in IMG/M
3300020084\|Ga0194110_10413491	Not Available	907	Open in IMG/M
3300020186\|Ga0163153_10043354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3163	Open in IMG/M
3300020192\|Ga0163147_10049236	All Organisms → cellular organisms → Bacteria	3218	Open in IMG/M
3300020222\|Ga0194125_10391424	Not Available	882	Open in IMG/M
3300022756\|Ga0222622_10403259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300023088\|Ga0224555_1013008	All Organisms → cellular organisms → Bacteria	4796	Open in IMG/M
3300023088\|Ga0224555_1107719	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	861	Open in IMG/M
3300025477\|Ga0208192_1017569	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300025764\|Ga0209539_1339937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300025878\|Ga0209584_10090716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1121	Open in IMG/M
3300026377\|Ga0257171_1080221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300027625\|Ga0208044_1010081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3670	Open in IMG/M
3300027641\|Ga0208827_1074396	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1067	Open in IMG/M
3300027641\|Ga0208827_1123143	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300027676\|Ga0209333_1015226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2225	Open in IMG/M
3300027735\|Ga0209261_10019277	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1696	Open in IMG/M
3300027840\|Ga0209683_10064850	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1618	Open in IMG/M
3300027854\|Ga0209517_10002443	All Organisms → cellular organisms → Bacteria → Acidobacteria	26226	Open in IMG/M
3300027854\|Ga0209517_10012780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8853	Open in IMG/M
3300027854\|Ga0209517_10126295	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1675	Open in IMG/M
3300027854\|Ga0209517_10183561	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300027907\|Ga0207428_10216395	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300028653\|Ga0265323_10003992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474	6402	Open in IMG/M
3300028679\|Ga0302169_10155210	Not Available	577	Open in IMG/M
3300029817\|Ga0247275_1016889	All Organisms → cellular organisms → Bacteria	2406	Open in IMG/M
3300029817\|Ga0247275_1027824	All Organisms → cellular organisms → Bacteria → Proteobacteria	1717	Open in IMG/M
3300029999\|Ga0311339_10141432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2848	Open in IMG/M
3300030007\|Ga0311338_11091895	Not Available	766	Open in IMG/M
3300030659\|Ga0316363_10010338	All Organisms → cellular organisms → Bacteria → Acidobacteria	5597	Open in IMG/M
3300030659\|Ga0316363_10024005	All Organisms → cellular organisms → Bacteria	3240	Open in IMG/M
3300030706\|Ga0310039_10183284	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300031028\|Ga0302180_10007930	All Organisms → cellular organisms → Bacteria → Acidobacteria	7460	Open in IMG/M
3300031028\|Ga0302180_10081889	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300031234\|Ga0302325_10211505	All Organisms → cellular organisms → Bacteria	3314	Open in IMG/M
3300031235\|Ga0265330_10197185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300031235\|Ga0265330_10379648	Not Available	597	Open in IMG/M
3300031236\|Ga0302324_100005799	All Organisms → cellular organisms → Bacteria → Acidobacteria	26850	Open in IMG/M
3300031525\|Ga0302326_10202249	All Organisms → cellular organisms → Bacteria	3313	Open in IMG/M
3300031576\|Ga0247727_10004748	All Organisms → cellular organisms → Bacteria	28452	Open in IMG/M
3300031576\|Ga0247727_10021573	All Organisms → cellular organisms → Bacteria	9714	Open in IMG/M
3300031847\|Ga0310907_10781495	Not Available	533	Open in IMG/M
3300032070\|Ga0315279_10236322	Not Available	1382	Open in IMG/M
3300032118\|Ga0315277_10746967	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → unclassified Candidatus Solibacter → Candidatus Solibacter sp.	933	Open in IMG/M
3300032160\|Ga0311301_11574450	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300032160\|Ga0311301_11647084	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300032516\|Ga0315273_10021798	All Organisms → cellular organisms → Bacteria	8454	Open in IMG/M
3300032805\|Ga0335078_11373149	Not Available	800	Open in IMG/M
3300032805\|Ga0335078_12114538	Not Available	597	Open in IMG/M
3300032828\|Ga0335080_10061346	All Organisms → cellular organisms → Bacteria	4163	Open in IMG/M
3300032828\|Ga0335080_10977995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300032892\|Ga0335081_10267392	All Organisms → cellular organisms → Bacteria	2293	Open in IMG/M
3300033158\|Ga0335077_10730258	Not Available	1016	Open in IMG/M
3300033888\|Ga0334792_014057	All Organisms → cellular organisms → Bacteria → Acidobacteria	3034	Open in IMG/M
3300033888\|Ga0334792_031518	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300034070\|Ga0334822_061391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	807	Open in IMG/M
3300034070\|Ga0334822_065774	Not Available	776	Open in IMG/M
3300034124\|Ga0370483_0341435	Not Available	519	Open in IMG/M
3300034125\|Ga0370484_0221086	Not Available	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.62%
Host-Associated	Host-Associated	4.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.99%
Aquatic	Environmental → Aquatic	22.63%
Plants	Host-Associated → Plants	4.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.31%
Freshwater	Environmental → Aquatic → Freshwater	21.90%
Peat	Environmental → Terrestrial → Peat	10.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.38%
Cave	Environmental → Terrestrial → Cave	1.46%
Sediment	Environmental → Aquatic → Sediment	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	24.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	10.22%
Lake	Environmental → Aquatic → Freshwater → Lake	8.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.19%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.73%
Loam	Environmental → Terrestrial → Soil → Loam	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.01%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	18.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	10.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.49%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	5.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	5.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.84%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.38%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.19%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.73%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	24.82%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	13.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	6.57%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.84%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.38%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	4.38%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	3.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.92%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.19%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.19%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.46%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.46%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.46%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.46%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.46%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.73%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001396	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012	Environmental	Open in IMG/M
3300001423	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012	Environmental	Open in IMG/M
3300001453	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012	Environmental	Open in IMG/M
3300001870	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211	Environmental	Open in IMG/M
3300002066	Barrow Graham LP Ref core NGADG0002-211 (Barrow Graham LP Ref core NGADG0002-211,NGADG0004-311, ASSEMBLY_DATE=20131004)	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300020192	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica- Oligotrophic Lake LV.19.MP6.G1	Environmental	Open in IMG/M
3300020222	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015034 Kigoma Deep Cast 250m	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025477	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150 (SPAdes)	Environmental	Open in IMG/M
3300025764	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-312 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027735	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033888	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1	Environmental	Open in IMG/M
3300034070	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-M	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101385251	3300000567	Peatlands Soil	PLFFTFIPILALLGNHDRENCLIYVDTEGLIPLTP*
AF_2010_repII_A1DRAFT_100170731	3300000597	Forest Soil	VGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEG
JGI1027J12803_1035362112	3300000955	Soil	MFAAGKTVEEAEEIPLIFKIDFVLALLCNYDRENCLINLGTE
JGI20175J14863_10244843	3300001396	Arctic Peat Soil	VGEAEDIPLFFTLIPVLALLSNYDRENCLINVGTEG
JGI20199J14953_10028883	3300001423	Arctic Peat Soil	VGEAEDIPLFFTLIPVLALLSNYDQGNCLINVGTEGQLR
JGI20197J15136_10037923	3300001453	Arctic Peat Soil	VGEAEDIPLFFTLIPVLALLSNYDQGNCLINVGTEGAL
JGI24129J20441_10385903	3300001870	Arctic Peat Soil	VGEAEDIPVFFTLIPVLALLSNYDRENCLINVGTE
JGIcombinedJ21911_100379793	3300002066	Arctic Peat Soil	VGEAEDIPVFFTLIPVLALLSNYDRENCLINVGTEGGI
Ga0075520_14470622	3300006795	Arctic Peat Soil	VGEAEEIPLFFTLIPVLALLSNYDQENCLINVGTEG
Ga0075425_1003718971	3300006854	Populus Rhizosphere	VEEVEEIPLIFKLISFLALLCNYDQESCLINLGTEGLERLG
Ga0066793_103206423	3300009029	Prmafrost Soil	LPEEIPLFFTLIPVLALLSNYDQENCLINVGTEGG
Ga0066793_106467831	3300009029	Prmafrost Soil	SLRSVAGKTVGEAEDIPLFVTLIPVLALLSNYDQGNCLINVGTEG*
Ga0111539_101369751	3300009094	Populus Rhizosphere	VGEAEEIPLFFTLIPILALLSNYDQENCLINVGTEG
Ga0116221_10052051	3300009523	Peatlands Soil	KTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGQNVWM*
Ga0116221_10209261	3300009523	Peatlands Soil	AGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGSPGSCFCPS*
Ga0116221_11036381	3300009523	Peatlands Soil	AGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGLIPLTP*
Ga0116221_11198141	3300009523	Peatlands Soil	AGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGRVP*
Ga0116221_11286252	3300009523	Peatlands Soil	EAEEIPLFFTFIPILALLGNHDRENCLIYVDTEG*
Ga0116221_15559851	3300009523	Peatlands Soil	TVGEAEDIPLFLTLIPVLALLSNYDQENCLINIGTEGAIRTALEWPIK*
Ga0116225_10740513	3300009524	Peatlands Soil	VGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGQNVWM*
Ga0116225_11428161	3300009524	Peatlands Soil	EAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGSPGSCFCPS*
Ga0116225_14905811	3300009524	Peatlands Soil	EEIPLFFTFIPILALLGNHDRENCLIYVDTEGRVP*
Ga0116220_101610351	3300009525	Peatlands Soil	VGEAEDIPLFLTLIPVLALLSNYDQENCLINIGTEGAKEASL*
Ga0116114_11413411	3300009630	Peatland	VGEAEEIPLLFTLIPILALLSNYDQENCLINVGTE
Ga0116122_11676111	3300009639	Peatland	VGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGPNRLKRMYFQ*
Ga0116120_12530801	3300009641	Peatland	VGEAEEIPLFFTLIPVLALLSNYDRENCLINIGTEGGLKKLGWD
Ga0116215_13804171	3300009672	Peatlands Soil	IPLFFTFIPILALLGNHDRENCLIYVDTEGPVGSPACMI*
Ga0116224_101619022	3300009683	Peatlands Soil	EAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGLIPLTP*
Ga0116217_103385631	3300009700	Peatlands Soil	VGEAEDIPLFLTLIPVLALLSNYDQENCLINIGTEG
Ga0116217_105997621	3300009700	Peatlands Soil	KTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEG*
Ga0116219_100617821	3300009824	Peatlands Soil	AGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGQNVWM*
Ga0116219_100897161	3300009824	Peatlands Soil	AGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGPVGSPACMI*
Ga0116219_101068112	3300009824	Peatlands Soil	EAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGRVP*
Ga0116223_100354063	3300009839	Peatlands Soil	VGEAEDIPLFLTLIPVLALLSNYDQENCLINIGTEGAIRTALEWPIK*
Ga0116223_102485502	3300009839	Peatlands Soil	AAGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGLIPLTP*
Ga0136449_1009217331	3300010379	Peatlands Soil	AEDIPLFLTLIPVLALLSNYDQENCLINIGTEGSKPNTSSPH*
Ga0136449_1011593251	3300010379	Peatlands Soil	AGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEG*
Ga0157298_101918352	3300012913	Soil	VGEVEEIPFFFTLIPLLALLSNYDQGNCLINVGTEGAIEIVSL*
Ga0181517_100082681	3300014160	Bog	AAGKTVGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGP*
Ga0181517_100433232	3300014160	Bog	AAGKTVGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGS*
Ga0181538_101095961	3300014162	Bog	VGEAEDIPLFFTLIPVLALLSNYDRENCLINIGTEG
Ga0181532_100226135	3300014164	Bog	AASNTVGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGGN*
Ga0181532_101134721	3300014164	Bog	VGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTE
Ga0181526_101197983	3300014200	Bog	VGEAEEIPLVFKLMSILALLSNYDQENCLINVGTE
Ga0182018_101985011	3300014489	Palsa	EAADIPLFFTWIPILALLSNYDQQICLIHVGTEG*
Ga0182010_100816783	3300014490	Fen	VEDAEEIPLLFTLIPVLALLSNYDQENCLINVGTEG
Ga0182010_102686363	3300014490	Fen	LLFTLIPVLALLSNYDQENCLINVGTEGRSRPSASTEA*
Ga0182014_100288546	3300014491	Bog	AAGKTVGEIEEIPLFFTLIPVLALLSNYDRENCLINIGTEGGSWARF*
Ga0182014_103446272	3300014491	Bog	AAGKTVGEIEEIPLFFTLIPVLALLSNYDRENCLINIGTEGHVIPS*
Ga0182017_101919963	3300014494	Fen	AAGQTVGEAEEIPLFFTLIPVLALLSNYDQENCLINVGTEGSTKPLRS*
Ga0182017_102782961	3300014494	Fen	TMGEAGEIPLFFTLIPVLALLSNYDQENCLINVGTEGTSQDRR*
Ga0182017_103555602	3300014494	Fen	AGKTVEDAEEIPLLFTLIPVLALLSNYDQENCLINVGTEGRQLSKSSTRLAFLRT*
Ga0182017_109432952	3300014494	Fen	VEEAEEIPLFFTLIPVLALLSNYDQENCLINVGTEG
Ga0182015_102125223	3300014495	Palsa	AAGKTVREAEDIPLFFTLIPVLALLSNYDRGNCLINIGTEGGAQR*
Ga0182011_101904363	3300014496	Fen	MGEAGEIPLFFTLIPVLALLSNYDQENCLINVGTEG
Ga0182011_110161681	3300014496	Fen	GEAEEIPLFFTLIPVLALLSNYDQENCLINVGTEECRRS*
Ga0182019_102480821	3300014498	Fen	VGEAEGIPLFFTLIPVLALLSNYDQENCLINVGTEG
Ga0182021_101717445	3300014502	Fen	AGKTVEDAEEIPLLFTLIPVLALLSNYDQENCLINVGTEGRSRPSASTEA*
Ga0182021_103840941	3300014502	Fen	AAGKTVEDAEEIPLLFTLIPVLALLSNYDQENCLINVGTEGTAPRS*
Ga0182021_104177841	3300014502	Fen	VEDAEEIPLLFTLIPVLALLSNYDQENCLINVGTE
Ga0182021_108253143	3300014502	Fen	MGEAGEIPLFFTLIPVLALLSNYDQENCLINVGTEGGDQVVGDPG
Ga0182027_100421808	3300014839	Fen	AAGKTVEKTEEIPLFFTLIPVLALLSNYDQENCLINVGTEGAC*
Ga0182027_105813851	3300014839	Fen	VGEAEGIPLFFTLIPVLALLSNYDQENCLINVGTE
Ga0182027_112016591	3300014839	Fen	AAGKTVGEAEDIPLFFTLIPVLALLSNYDRENCLINVGTEGTNRP*
Ga0182027_115411482	3300014839	Fen	VEEAIEIPLFFTLIPVLALLSNYDQENCLINVGTEGG
Ga0182027_118740461	3300014839	Fen	EAEDIPLFFTLIPVLALLSNYDRENCLINVGTEGKLARAQ*
Ga0182027_119993642	3300014839	Fen	AAGKTVGEAEDIPLFFTLIPVLALLSNYDRENCLINVGTEGWLVRS*
Ga0163144_101352931	3300015360	Freshwater Microbial Mat	KTVGEAEETPLFFTLIPVLAPLSNYDRETCLINVGTEGQSRSQQRAY*
Ga0163144_114209761	3300015360	Freshwater Microbial Mat	TPLFFTLIPVLAPLSNYDRETCLINVGTEGTLML*
Ga0182041_100999073	3300016294	Soil	MGEAGEIPLFFTLIPILALLSNYDQENCLINVGTEGQ
Ga0181520_10000264109	3300017988	Bog	AAGKTVGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGP
Ga0181520_100837192	3300017988	Bog	AAGKTVGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGS
Ga0181520_105958031	3300017988	Bog	VGEAEEIPLVFKLMSILALLSNYDQENCLINVGTEG
Ga0187872_103562531	3300018017	Peatland	TVGEAEEIPLLFTLIPILALLSNYDQENCLINVGTEGVADDQRRGVAYQ
Ga0187861_100305822	3300018020	Peatland	SAAGKTVREAEEIPLFFTLIPVLTLLSNYDRENCLINVGTEGRLRS
Ga0187883_104339691	3300018037	Peatland	AEDIPLFFTWIPILALLSNYDQEICLIHFGTEGSLRGP
Ga0187852_13954092	3300019082	Peatland	VGEAEEIPLVFKLMSILALLSNYDQENCLINVGTEGPKHW
Ga0163151_100633831	3300020057	Freshwater Microbial Mat	SAVGKTVGEAEETPLFFTLIPVLAPLSNYDRETCLINVGTEGRAR
Ga0194111_104090321	3300020083	Freshwater Lake	KTVREAEEIPLFFTLIPVLALLSNYDRGSCLINVGTEGASAD
Ga0194110_104134913	3300020084	Freshwater Lake	SAAGKTVREAEEIPLFFTLIPVLALLSNYDRGSCLINVGTEGASAD
Ga0163153_100433541	3300020186	Freshwater Microbial Mat	VGEAEETPLFFTLIPVLAPLSNYDRETCLINVGTEGLASMPAP
Ga0163147_100492364	3300020192	Freshwater Microbial Mat	AEETPLFFTLIPVLAPLSNYDRETCLINVGTEGTLML
Ga0194125_103914241	3300020222	Freshwater Lake	EAEEIPLFFTLIPVLALLSNYDRGSCLINVGTEGASAD
Ga0222622_104032593	3300022756	Groundwater Sediment	VGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGA
Ga0224555_10130085	3300023088	Soil	AAEIPLFFTLIPVLALLSNYDQENCLINVGTEGSKPRRSPE
Ga0224555_11077191	3300023088	Soil	SAAGKTVGEIEEIPLFFTLIPVLALLSNYDRENCLINIGTEGGSWARF
Ga0208192_10175693	3300025477	Peatland	SAAGKTVREAEEIPLFFTLIPVLTLLSNYDQENCLINVGTEGATRS
Ga0209539_13399372	3300025764	Arctic Peat Soil	SAAGKTVGEAEEIPLIFKLISILALLCNYDQENCLINVGTEGPTSDNRFRN
Ga0209584_100907161	3300025878	Arctic Peat Soil	VGELEDIPLFFTLIPVLALLSNYDRENCLINVGTEGAF
Ga0257171_10802212	3300026377	Soil	MGEAEDIPLFFTLIPVLALLSNYDRENCLINVGTEG
Ga0208044_10100811	3300027625	Peatlands Soil	VGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGGSLRQNILTP
Ga0208827_10743962	3300027641	Peatlands Soil	KTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGLIPLTP
Ga0208827_11231433	3300027641	Peatlands Soil	SAAGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGRVP
Ga0209333_10152261	3300027676	Forest Soil	AEDIPLFFTWIPILALLSNYDQEICLIHVGTEGQLRHPCR
Ga0209261_100192771	3300027735	Wetland Sediment	VGEAEEIPLFFTLIPILALLSNYDQVHCLINVGTEGTFRP
Ga0209683_100648503	3300027840	Wetland Sediment	VGEAEEIPLFFTLIPILALLSNYDQVHCLINVGTEGSYESAAE
Ga0209517_100024431	3300027854	Peatlands Soil	EEIPLFFTFIPILALLGNHDRENCLIYVDTEGQNVWM
Ga0209517_100127804	3300027854	Peatlands Soil	SAAGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGLIPLTP
Ga0209517_101262952	3300027854	Peatlands Soil	AEEIPLFFTFIPILALLGNHDRENCLIYVDTEGRVP
Ga0209517_101835611	3300027854	Peatlands Soil	SAAGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEG
Ga0207428_102163951	3300027907	Populus Rhizosphere	VGEAEEIPLFFTLIPILALLSNYDQENCLINVGTEGREQLAK
Ga0265323_100039929	3300028653	Rhizosphere	AEEIPLFFTLIPVLALLSNYDQENCLINVGTEGFLRSRHTCVC
Ga0302169_101552101	3300028679	Fen	SAAGQTVGEAEEIPLFFTLIPVLALLSNYDQENCLINVGTEGSTKPLRS
Ga0247275_10168891	3300029817	Soil	VGEAEEIPLLFTLIPILALLSNYDQENCLINVGTEGRA
Ga0247275_10278241	3300029817	Soil	VGEAEEIPLVFKLMSILALLSNYDQENCLINVGTEGR
Ga0311339_101414321	3300029999	Palsa	VTEDIPLFFTWIPILALLSNYDQEICLIHVGTEGV
Ga0311338_110918952	3300030007	Palsa	AADIPLFFTWIPILALLSNYDQQICLIHVGTEGQA
Ga0316363_100103381	3300030659	Peatlands Soil	AAGKTVGEAEEIPLFFTFIPILALLGNHDRENCLIYVDTEGQNVWM
Ga0316363_100240051	3300030659	Peatlands Soil	AEEIPLFFTFIPILALLGNHDRENCLIYVDTEGLIPLTP
Ga0310039_101832841	3300030706	Peatlands Soil	EEIPLFFTFIPILALLGNHDRENCLIYVDTEGPVGSPACMI
Ga0302180_1000793017	3300031028	Palsa	GVTEDIPLFFTWIPILALLSNYDQEICLIHVGTEGL
Ga0302180_100818894	3300031028	Palsa	GGEAGEAEDVPLFFIWIPILALLSNYDQVTCLIHVGTEGV
Ga0302325_102115056	3300031234	Palsa	EAGEAADIPLFFTWIPILALLSNYDQQICLIHVGTEGTDAIPL
Ga0265330_101971851	3300031235	Rhizosphere	GKTVEEAEEIPLFFTLIPVLALLSNYDQENCLINVGTEGAPSNTR
Ga0265330_103796481	3300031235	Rhizosphere	SAAGKTVEEAEEIPLFFTLIPVLALLSNYDQENCLINVGTEGFLRSRHTCVC
Ga0302324_10000579925	3300031236	Palsa	GGEAGEAADIPLFFTWIPILALLSNYDQQICLIHVGTEGPA
Ga0302326_102022491	3300031525	Palsa	AGEAADIPLFFTWIPILALLSNYDQQICLIHVGTEGTDAIPL
Ga0247727_1000474831	3300031576	Biofilm	PAAGKTVGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGQA
Ga0247727_1002157313	3300031576	Biofilm	PAAGKTVGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGRPINKG
Ga0310907_107814951	3300031847	Soil	LFFTLIPILALLSNYDQENCLINVGTEGRYQPWLAKRASPVL
Ga0315279_102363222	3300032070	Sediment	LFFTLIPILALLSNYDQENCLINVGTEGSLSLERVAA
Ga0315277_107469671	3300032118	Sediment	SATGKTVGEAKDIPLFFTLIPVLALLSNYDQENCLINVGTEGASPIRTRAFTERWPTL
Ga0311301_115744502	3300032160	Peatlands Soil	TVGEAEDIPLFLTLIPVLALLSNYDQENCLINIGTEGAIRTALEWPIK
Ga0311301_116470843	3300032160	Peatlands Soil	AEDIPLFLTLIPVLALLSNYDQENCLINIGTEGSKPNTSSPH
Ga0315273_100217986	3300032516	Sediment	AAAGNTVGEAEEIPLFFTSIPILALLSNYDRGSCLIHVGTEG
Ga0335078_113731491	3300032805	Soil	SAAGKTVGEAEGIPLFFTLIPVLALLSNYDRENCLINVGTEGHIAYHPG
Ga0335078_121145381	3300032805	Soil	EEIPLIFTLIPVLALLSNYNRETCLINVGTEGEKGGLAA
Ga0335080_100613469	3300032828	Soil	AEEIPLFFTLIPVLALLSNYDRENCLINVGTEGPLRTSRASGTR
Ga0335080_109779951	3300032828	Soil	GKTVGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGGLRQ
Ga0335081_102673921	3300032892	Soil	EEIPLFFTLIPVLALLSNYDRENCLINVGTEGPLRTSRASGTR
Ga0335077_107302581	3300033158	Soil	AAGKTVGEAEEIPLFFTLIPVLALLSNYDRENCLINVGTEGRPRRLVAPSR
Ga0334792_014057_1_138	3300033888	Soil	TAGAAAEIPLFFTLIPVLALLSNYDQENCLINVGTEGSKPRRSPE
Ga0334792_031518_1649_1777	3300033888	Soil	AAEIPLFFTLIPVLALLSNYDQENCLINVGTEGRGHKGPGGQ
Ga0334822_061391_2_154	3300034070	Soil	SAAGKTVEDAEEIPLLFTLIPVLALLSNYDQENCLINVGTEGPTPRRGRG
Ga0334822_065774_647_775	3300034070	Soil	GEAEEIPLFFTLIPVLALLSNYDQENCLINVGTEGSTKPLRS
Ga0370483_0341435_225_386	3300034124	Untreated Peat Soil	VGEVEDIPLFFTLIPVLALLTNYDRENCLINVGTEGALWRWLIRGHSGAVGKL
Ga0370484_0221086_363_491	3300034125	Untreated Peat Soil	VEEAEEIPLFFTLIPVLALLSNYDQENCLINVGTEGSPKPNS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056988

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences