Metagenome Family F100041

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F100041
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	70 residues
Representative Sequence	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITDIEDELGIDESEP
Number of Associated Samples	63
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.70 %
% of genes near scaffold ends (potentially truncated)	30.10 %
% of genes from short scaffolds (< 2000 bps)	90.29 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (85.437 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (58.252 % of family members)
Environment Ontology (ENVO)	Unclassified (37.864 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (89.320 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 74.65% β-sheet: 0.00% Coil/Unstructured: 25.35%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF04188	Mannosyl_trans2	4.85
PF13231	PMT_2	1.94
PF02525	Flavodoxin_2	0.97
PF09299	Mu-transpos_C	0.97
PF13185	GAF_2	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG5542	Mannosyltransferase related to Gpi18	Carbohydrate transport and metabolism [G]	4.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.44 %
All Organisms	root	All Organisms	14.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.44 %
cellular organisms	root	All Organisms → cellular organisms	14.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.44 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.44 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	12.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.44 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.44 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.97 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001404\|JGI20181J14860_1002874	Not Available	1980	Open in IMG/M
3300001404\|JGI20181J14860_1004160	Not Available	1507	Open in IMG/M
3300001404\|JGI20181J14860_1016239	Not Available	566	Open in IMG/M
3300001423\|JGI20199J14953_1014441	Not Available	663	Open in IMG/M
3300001423\|JGI20199J14953_1014944	Not Available	652	Open in IMG/M
3300001424\|JGI20198J14950_1001294	Not Available	2543	Open in IMG/M
3300001429\|JGI20202J14951_1013722	Not Available	621	Open in IMG/M
3300002347\|JGIcombinedJ26865_1008285	Not Available	1753	Open in IMG/M
3300003369\|JGI24140J50213_10039343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1715	Open in IMG/M
3300003369\|JGI24140J50213_10076400	Not Available	1143	Open in IMG/M
3300003369\|JGI24140J50213_10242899	Not Available	554	Open in IMG/M
3300006642\|Ga0075521_10008944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3813	Open in IMG/M
3300006642\|Ga0075521_10020075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2711	Open in IMG/M
3300006642\|Ga0075521_10165672	Not Available	1040	Open in IMG/M
3300006642\|Ga0075521_10368706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300006642\|Ga0075521_10554981	Not Available	564	Open in IMG/M
3300006795\|Ga0075520_1123045	Not Available	1155	Open in IMG/M
3300006795\|Ga0075520_1139999	Not Available	1064	Open in IMG/M
3300014502\|Ga0182021_12400670	Not Available	634	Open in IMG/M
3300015374\|Ga0132255_106007558	Not Available	514	Open in IMG/M
3300025386\|Ga0208585_1007370	Not Available	1125	Open in IMG/M
3300025427\|Ga0208077_1009089	Not Available	1427	Open in IMG/M
3300025443\|Ga0208081_1002390	All Organisms → cellular organisms → Bacteria	3793	Open in IMG/M
3300025443\|Ga0208081_1002685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3580	Open in IMG/M
3300025443\|Ga0208081_1020063	Not Available	1226	Open in IMG/M
3300025443\|Ga0208081_1021480	Not Available	1175	Open in IMG/M
3300025461\|Ga0208851_1008049	Not Available	2325	Open in IMG/M
3300025461\|Ga0208851_1008087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2319	Open in IMG/M
3300025461\|Ga0208851_1016359	Not Available	1485	Open in IMG/M
3300025461\|Ga0208851_1043548	Not Available	802	Open in IMG/M
3300025461\|Ga0208851_1084291	Not Available	526	Open in IMG/M
3300025474\|Ga0208479_1012400	Not Available	1821	Open in IMG/M
3300025474\|Ga0208479_1019931	Not Available	1420	Open in IMG/M
3300025479\|Ga0208588_1090864	Not Available	570	Open in IMG/M
3300025479\|Ga0208588_1096150	Not Available	549	Open in IMG/M
3300025495\|Ga0207932_1003973	All Organisms → cellular organisms → Bacteria	4894	Open in IMG/M
3300025495\|Ga0207932_1024135	Not Available	1609	Open in IMG/M
3300025527\|Ga0208714_1005719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3346	Open in IMG/M
3300025604\|Ga0207930_1101377	Not Available	656	Open in IMG/M
3300025650\|Ga0209385_1070739	Not Available	1207	Open in IMG/M
3300025650\|Ga0209385_1100665	Not Available	937	Open in IMG/M
3300028639\|Ga0302168_1061527	Not Available	549	Open in IMG/M
3300028649\|Ga0302162_10194889	Not Available	503	Open in IMG/M
3300028650\|Ga0302170_10199799	Not Available	511	Open in IMG/M
3300028652\|Ga0302166_10028189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1123	Open in IMG/M
3300028665\|Ga0302160_10081774	Not Available	692	Open in IMG/M
3300028674\|Ga0302161_10222483	Not Available	510	Open in IMG/M
3300028679\|Ga0302169_10035072	Not Available	1160	Open in IMG/M
3300028679\|Ga0302169_10134898	Not Available	613	Open in IMG/M
3300028679\|Ga0302169_10135484	Not Available	612	Open in IMG/M
3300028732\|Ga0302264_1016720	Not Available	1685	Open in IMG/M
3300028732\|Ga0302264_1046587	Not Available	1008	Open in IMG/M
3300028736\|Ga0302214_1072566	Not Available	715	Open in IMG/M
3300028739\|Ga0302205_10186437	Not Available	531	Open in IMG/M
3300028740\|Ga0302294_10061063	Not Available	889	Open in IMG/M
3300028741\|Ga0302256_10031164	Not Available	1327	Open in IMG/M
3300028741\|Ga0302256_10223553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300028743\|Ga0302262_10042941	Not Available	1565	Open in IMG/M
3300028743\|Ga0302262_10300628	Not Available	545	Open in IMG/M
3300028764\|Ga0302260_1069480	Not Available	726	Open in IMG/M
3300028764\|Ga0302260_1075218	Not Available	697	Open in IMG/M
3300028770\|Ga0302258_1021217	Not Available	1459	Open in IMG/M
3300028777\|Ga0302290_10014855	Not Available	1895	Open in IMG/M
3300028855\|Ga0302257_1154403	Not Available	516	Open in IMG/M
3300028856\|Ga0302295_1056081	Not Available	828	Open in IMG/M
3300028861\|Ga0302259_1033376	Not Available	1194	Open in IMG/M
3300028865\|Ga0302291_10233589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300028865\|Ga0302291_10316561	Not Available	536	Open in IMG/M
3300028869\|Ga0302263_10058923	Not Available	1515	Open in IMG/M
3300028869\|Ga0302263_10153156	Not Available	919	Open in IMG/M
3300028870\|Ga0302254_10122276	Not Available	953	Open in IMG/M
3300028870\|Ga0302254_10229641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	683	Open in IMG/M
3300029923\|Ga0311347_10984625	Not Available	512	Open in IMG/M
3300029984\|Ga0311332_11228833	Not Available	604	Open in IMG/M
3300029987\|Ga0311334_10844072	Not Available	755	Open in IMG/M
3300029989\|Ga0311365_10241932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1555	Open in IMG/M
3300029989\|Ga0311365_10477277	Not Available	1080	Open in IMG/M
3300029990\|Ga0311336_10733721	Not Available	848	Open in IMG/M
3300029995\|Ga0302210_10089469	Not Available	865	Open in IMG/M
3300030000\|Ga0311337_11371555	Not Available	619	Open in IMG/M
3300030002\|Ga0311350_10143520	Not Available	2111	Open in IMG/M
3300030002\|Ga0311350_10304391	Not Available	1424	Open in IMG/M
3300030014\|Ga0302175_10127548	Not Available	593	Open in IMG/M
3300030048\|Ga0302273_1116757	Not Available	788	Open in IMG/M
3300030052\|Ga0302217_10040761	Not Available	1009	Open in IMG/M
3300030114\|Ga0311333_10712426	Not Available	837	Open in IMG/M
3300030114\|Ga0311333_11291341	Not Available	625	Open in IMG/M
3300030114\|Ga0311333_11329891	Not Available	616	Open in IMG/M
3300030114\|Ga0311333_11681927	Not Available	550	Open in IMG/M
3300030294\|Ga0311349_10984910	Not Available	791	Open in IMG/M
3300030294\|Ga0311349_11832883	Not Available	559	Open in IMG/M
3300030294\|Ga0311349_12010759	Not Available	531	Open in IMG/M
3300030339\|Ga0311360_10792659	Not Available	752	Open in IMG/M
3300030673\|Ga0302287_10197992	Not Available	585	Open in IMG/M
3300030943\|Ga0311366_10748773	Not Available	848	Open in IMG/M
3300030943\|Ga0311366_11893401	Not Available	508	Open in IMG/M
3300031232\|Ga0302323_102926256	Not Available	545	Open in IMG/M
3300031521\|Ga0311364_11653599	Not Available	631	Open in IMG/M
3300031521\|Ga0311364_11671466	Not Available	627	Open in IMG/M
3300031722\|Ga0311351_10884327	Not Available	682	Open in IMG/M
3300031726\|Ga0302321_102148602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300031918\|Ga0311367_10718980	Not Available	1014	Open in IMG/M
3300031918\|Ga0311367_11986523	Not Available	561	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.03%
Host-Associated	Host-Associated	0.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.03%
Plants	Host-Associated → Plants	0.97%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	60.19%
Soil	Environmental → Terrestrial → Soil	38.83%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	60.19%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	60.19%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	37.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.97%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	58.25%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	37.86%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.94%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.97%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001404	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012	Environmental	Open in IMG/M
3300001423	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012	Environmental	Open in IMG/M
3300001424	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012	Environmental	Open in IMG/M
3300001429	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-092012	Environmental	Open in IMG/M
3300002347	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (NGEE Surface samples 415 (1, 2, 3 deep-072012) AP id is 1030520, ASSEMBLY_DATE=20131219)	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300025386	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025427	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025443	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025479	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025527	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300028639	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_2	Environmental	Open in IMG/M
3300028649	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_2	Environmental	Open in IMG/M
3300028650	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_1	Environmental	Open in IMG/M
3300028652	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_3	Environmental	Open in IMG/M
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental	Open in IMG/M
3300028674	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_1	Environmental	Open in IMG/M
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental	Open in IMG/M
3300028732	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_4	Environmental	Open in IMG/M
3300028736	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_3	Environmental	Open in IMG/M
3300028739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_3	Environmental	Open in IMG/M
3300028740	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_3	Environmental	Open in IMG/M
3300028741	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E3_4	Environmental	Open in IMG/M
3300028743	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_4	Environmental	Open in IMG/M
3300028764	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E1_4	Environmental	Open in IMG/M
3300028770	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4	Environmental	Open in IMG/M
3300028777	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_3	Environmental	Open in IMG/M
3300028855	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4	Environmental	Open in IMG/M
3300028856	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N2_4	Environmental	Open in IMG/M
3300028861	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_4	Environmental	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300028869	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N1_4	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029923	II_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300029995	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E3_2	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030048	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_3	Environmental	Open in IMG/M
3300030052	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_N3_3	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030673	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_4	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031722	II_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20181J14860_10028744	3300001404	Arctic Peat Soil	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFGDDEEYELRGRVERLITDIEYELGIDERTGHR*
JGI20181J14860_10041602	3300001404	Arctic Peat Soil	MTLGDHADAYRQVKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP*
JGI20181J14860_10162392	3300001404	Arctic Peat Soil	MALRHDADAYRQVKDAWKDATEARQIVMLDDLRDLLDGIGFADDEYELREKVERLITDIEDDLGIDDSRL*
JGI20199J14953_10144413	3300001423	Arctic Peat Soil	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYELGIDE
JGI20199J14953_10149442	3300001423	Arctic Peat Soil	MALHDDADAYRQVKDAWRDATEARQIIMLDDLRDLLDGIGFADDDEYELREKVERLITEIEDDLGIDESGL*
JGI20198J14950_10012944	3300001424	Arctic Peat Soil	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYELGIDESEP*
JGI20202J14951_10137222	3300001429	Arctic Peat Soil	YRRVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDESEP*
JGIcombinedJ26865_10082853	3300002347	Arctic Peat Soil	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFXDDEEYELRGRVERLITDIEYELGIXESEP*
JGI24140J50213_100393432	3300003369	Arctic Peat Soil	MTLDDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDDDAEDELRXRVERLITDIEYELGIDDSEP*
JGI24140J50213_100764002	3300003369	Arctic Peat Soil	MTLGDHADAYRRVKEAWKEATEARQFTMLDDLQDLLDGIGIDDDEEYELRGRVERLITEIEDELGIDESEP*
JGI24140J50213_102428991	3300003369	Arctic Peat Soil	MALHDDADAYRQVKDAWRDATEARQIIMLDDLRDLLDGIGFADDDEYELREKVERLILEIEDDLGIDESGL*
Ga0075521_100089444	3300006642	Arctic Peat Soil	MALHHDADAYRQVKDAWKDATEARQIIMLDDLRDLLDGIGFADDDEYELREKVERLIIEIEDDLGIDESRL*
Ga0075521_100200754	3300006642	Arctic Peat Soil	MALHDDADAYRQVKDAWRDATEARQIIMLDDLRDLLDGIGFADDDEYELREKVERLILEIEDDLGIDESGQ*
Ga0075521_101656722	3300006642	Arctic Peat Soil	MALHDDADAYRQVKDAWRDATEARQIVMLDDLRDLLDGIGFADDDEYELREKVERLILEIEDDLGIDESGL*
Ga0075521_103687062	3300006642	Arctic Peat Soil	MTLDDHADAYRQVKEAWRDATEARQITMLDDLRDLLDGIGFDDDEEYELRGRVERLITDIEYELGIDESEP*
Ga0075521_105549813	3300006642	Arctic Peat Soil	TLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFGDDEEYELRGRVERLITDIEYELGIDESEP*
Ga0075520_11230454	3300006795	Arctic Peat Soil	MTLGEHADAYRRVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDESEP*
Ga0075520_11399991	3300006795	Arctic Peat Soil	HADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYELGIDESEP*
Ga0182021_124006701	3300014502	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEYELGIDESEP*
Ga0132255_1060075582	3300015374	Arabidopsis Rhizosphere	RQVKDAWRDATEARQIVMLDDLRGLLDGSGFAGDDEYELREKVERLITDIEDDLGIDESGQ*
Ga0208585_10073702	3300025386	Arctic Peat Soil	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFDDDAEDELRGRVERLITDIEYELGIDESEP
Ga0208077_10090892	3300025427	Arctic Peat Soil	MTLGDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDGDDEYELRGRVERLITEIEDELGIDESEP
Ga0208081_10023903	3300025443	Arctic Peat Soil	MALHDDADAYRQVKDAWRDATEARQIIMLDDLRDLLDGIGFADDDEYELREKVERLITEIEDDLGIDESGL
Ga0208081_10026853	3300025443	Arctic Peat Soil	MALRHDADAYRQVKDAWKDATEARQIVMLDDLRDLLDGIGFADDEYELREKVERLITDIEDDLGIDDSRL
Ga0208081_10200633	3300025443	Arctic Peat Soil	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYELGIDESEP
Ga0208081_10214802	3300025443	Arctic Peat Soil	LHERDQSGGDCMTLGDHADAYRQVKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0208851_10080493	3300025461	Arctic Peat Soil	MALHHDADAYRQVKDAWKDATEARQIIMLDDLRDLLDGIGFADDDEYELREKVERLIIEIEDDLGIDESRL
Ga0208851_10080872	3300025461	Arctic Peat Soil	MTLGDHADAYRQVKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0208851_10163591	3300025461	Arctic Peat Soil	MTLDDHADAYRQVKEAWRDATEARQITMLDDLRDLLDGIGFDDDEEYELRGRVERLITDIEYELGIDESEP
Ga0208851_10435481	3300025461	Arctic Peat Soil	MTLGDHADAYRRVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDESEP
Ga0208851_10842911	3300025461	Arctic Peat Soil	MALHHDADAYRQVKDAWKDATAARQIVMLDDLRDLLDGIGFADDDEYELREKVERLITEIEDDLGIDESGQ
Ga0208479_10124004	3300025474	Arctic Peat Soil	LHERDQSGGDCMTLGDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDESEP
Ga0208479_10199311	3300025474	Arctic Peat Soil	MALHDDADAYRQVKDAWRDATEARQIVMLDDLRDLLDGIGFADDDEYELREKVERLILEIEDDLGIDESGL
Ga0208588_10908641	3300025479	Arctic Peat Soil	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYELGI
Ga0208588_10961501	3300025479	Arctic Peat Soil	MTLDDHADAYRQVTEAWKDATEARQITMLDDLQDLLDGIGFDGDDEYELRGRVERLITEIEDELGIDESEP
Ga0207932_10039739	3300025495	Arctic Peat Soil	MTLGDHADAYRQVKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRGRVERLITDIEYELGIDESEP
Ga0207932_10241355	3300025495	Arctic Peat Soil	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDI
Ga0208714_10057195	3300025527	Arctic Peat Soil	MTLGDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDDGEEYELRGRVERLITEIEYELGIDESEP
Ga0207930_11013772	3300025604	Arctic Peat Soil	MTLGDHADAYRRVKEAWKEATEARQFTMLDDLQDLLDGIGIDDDEEYELRGRVERLITEIEDELGIDESEP
Ga0209385_10707392	3300025650	Arctic Peat Soil	MALHDDADAYRQVKDAWRDATEARQIIMLDDLRDLLDGIGFADDDEYELREKVERLILEIEDDLGIDESGQ
Ga0209385_11006652	3300025650	Arctic Peat Soil	MTLGEHADAYRRVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITDIEYELGIDESEP
Ga0302168_10615271	3300028639	Fen	LHERDQSGGDCMTLGDHADAYRQVKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDPEP
Ga0302162_101948892	3300028649	Fen	LHERDQSGGDCMTLGDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEYELGIDESEP
Ga0302170_101997991	3300028650	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLHDLLDGIGFDGDEEYELRGRVERLITEIEDELGIDDSEP
Ga0302166_100281892	3300028652	Fen	LHERAQSGGDCMTLDDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEYELGIDESEP
Ga0302160_100817741	3300028665	Fen	YRQVKEAWRDATEARQITMLDDLQDLLDGIGFNDDEEYELRGRVERLITDIEYDLGIDESEP
Ga0302161_102224832	3300028674	Fen	LPERDQSGGDCMTLGDHADAYRRVKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0302169_100350723	3300028679	Fen	YRQVKDAWRDATEARQIVMLDDLRDLLDGIGFADDDEYELREKVERLILEIEDDLGIDESGL
Ga0302169_101348981	3300028679	Fen	MTLGDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFGDDQEYELRGRVERLITEIEDELGID
Ga0302169_101354842	3300028679	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLIT
Ga0302264_10167202	3300028732	Fen	MALHDDADAYRQVKDAWRDATEARQIVMLDDLRDLLDGIGFADDDEYELREKVERLITDIEDDLGIDESGL
Ga0302264_10465872	3300028732	Fen	MTLDDHADAYRQVTEAWKDATEARQITMLDDLQDLLDGIGFDGDEEYELRGRVERLITEIEDELGIDESEP
Ga0302214_10725661	3300028736	Fen	MTLDDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDDEEYELRGRVERLITEIEYELGIDESEP
Ga0302205_101864372	3300028739	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0302294_100610632	3300028740	Fen	MTLGDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFNDDEEYELRGRVERLITDIEDELGIDESEP
Ga0302256_100311641	3300028741	Fen	QVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0302256_102235531	3300028741	Fen	MTLDDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEYELGIDESEP
Ga0302262_100429411	3300028743	Fen	LHERAQSGGDCMTLDDHADAYRQVTEAWKDATEARQITMLDDLQDLLDGIGFDGDEEYELRGRVERLITEIEDELGIDESEP
Ga0302262_103006281	3300028743	Fen	MALHDDADAYRQVKDAWRDATEARQIIMLDDLRDLLDGIGFADDDEYELREKIERLITDIEDDLGIDESGQ
Ga0302260_10694801	3300028764	Fen	MTLGDHADAYRQVTEAWKDATEARQITMLDDLQDLLDGIGFDGDEEYELRGRVERLITEIEDELGIDESEP
Ga0302260_10752182	3300028764	Fen	LHERDQSGGDCMTLGDHADAYRQAKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0302258_10212173	3300028770	Fen	MTLGDHADAYRQAKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0302290_100148552	3300028777	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEYELGIDESEP
Ga0302257_11544032	3300028855	Fen	ADAYRQVKDAWRDATEARQIVMLDDLRDLLDGIGFADDDEYELREKVERLILEIEDDLGIDESGL
Ga0302295_10560812	3300028856	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYDLGIDESEP
Ga0302259_10333763	3300028861	Fen	LHERDQSGGDCMTLGDHADAYRRVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0302291_102335892	3300028865	Fen	MTLDDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEYELGIDESEP
Ga0302291_103165612	3300028865	Fen	TMDDDADAYRRVKEAWKDATEARQITMLDDLQDLLDGIGFDGDEEYELRGRVERLITEIEDELGIDESEP
Ga0302263_100589232	3300028869	Fen	MTLDDHAAAYRQVTEAWKDATEARQITMLDDLHDLLDGIGFDGDEEYELRGRVERLITEIEDELGIDESEP
Ga0302263_101531562	3300028869	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLHNLLDGIGSDDDEEYELRGRVERLITDIEYELGIDESEP
Ga0302254_101222761	3300028870	Fen	MTLDDHADAYRQVKEAWKDATEARQITMLDDLDDLLDGIGFDDDAEDELRGRVERLITDIEDELGIDDSEP
Ga0302254_102296411	3300028870	Fen	TLGDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEYELGIDESEP
Ga0311347_109846251	3300029923	Fen	PERDQSGGDCMTLGDHADAYRQAKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0311332_112288331	3300029984	Fen	DAYRQVKQAWKDATEARQITMLDDLQDLLDGIGFDDDEYELRGKVERLITEIEDELGIDE
Ga0311334_108440721	3300029987	Fen	KEAWRDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEYELGIDESEP
Ga0311365_102419323	3300029989	Fen	MTLGEHADAYRRVKEAWKDATEARQITMLDDLQDLLDGIGFDGDEEYELRGRVERLITEIEDELGIDESEP
Ga0311365_104772773	3300029989	Fen	GDHADAYRQVKEACRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYDLGIDESEP
Ga0311336_107337211	3300029990	Fen	DAYRRVKEAWKDATEARQITMLDDLQDLLDGIGFDDDAEDELRERVERLITDIEYELGIDDSEP
Ga0302210_100894692	3300029995	Fen	MALHDDADAYRQVKDAWRDATEARQIVMLDDLRDLLDGIGFADDDEYELRGKVERLILEIEDDLGIDESGL
Ga0311337_113715551	3300030000	Fen	MTLDDHADAYRQVKQAWKDATEARQITMLDDLQDLLDGIGFDDDEYELRGKVERLITEIEDELGIDE
Ga0311350_101435204	3300030002	Fen	LPERDQSGGDCMTLGDHADAYRQVKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0311350_103043913	3300030002	Fen	YRQVKDAWRDATEARQIIMLDDLRDLLDGIGFADDDEYELREKIERLITDIEDDLGIDESGQ
Ga0302175_101275482	3300030014	Fen	LPERDQSGGDCMTLGEHADAYRRVKEAWKDATEARQITMLDDLQDLLDGIGFDGDEEYELRGRVERLITEIEDELGIDESEP
Ga0302273_11167571	3300030048	Bog	MALHDDADAYRQVKDAWRDATEARQIVMLDDLRDLLDGIGFADDDEYELREKVERLITEIEDDLGIDES
Ga0302217_100407612	3300030052	Fen	LPERDQSGGDCMTLGEHADAYRRVKEAWKDATEARQITMLDDLQDLLDGIGVDDDEEYELRGRVERLITEIEDELGIDDSEP
Ga0311333_107124263	3300030114	Fen	MTLDDHADAYRQVKEAWKDATEARQIVMLDDLQDLLDGIGFDDDEEYELRERVERLITEIEDELGIDDSEP
Ga0311333_112913411	3300030114	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITDIEDELGIDESEP
Ga0311333_113298911	3300030114	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYELGIDESE
Ga0311333_116819272	3300030114	Fen	MTLDDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGVDDDEEYELRERVERLITDIEDELGIDDSEP
Ga0311349_109849102	3300030294	Fen	LHERDQSGGDCMTLGEHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDGDEEYELRGRVERLITEIEDELGIDETEP
Ga0311349_118328831	3300030294	Fen	YRQVKEAWKDATEARQIIMLDDLQDLLDGIGFDDDEEYELRERVERLITEIEDELGIDDSEP
Ga0311349_120107593	3300030294	Fen	GDHADAYRQVKEAWRDATEARQITMLDDLHNLLDGIGSDDDEEYELRGRVERLITDIEYELGIDESEP
Ga0311360_107926592	3300030339	Bog	MTLDDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITDIEYELGIDESEP
Ga0302287_101979922	3300030673	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYDL
Ga0311366_107487731	3300030943	Fen	MTLGDHADAYRQVKEAWKDATEARQITMLDDLQDLLDGIGFDDDAEDELRERVERLITDIEYELGIDESEP
Ga0311366_118934011	3300030943	Fen	YRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYDLGIDESEP
Ga0302323_1029262562	3300031232	Fen	LHERDQSGGDGMTLDDHADAYRQVKQAWKDATEARQITMLDDLQDLLDGIGFDDDEYELRGKVERLITEIEDELGIDE
Ga0311364_116535991	3300031521	Fen	MTLDDHADAYRQVTEAWKDATEARQITMLDDLQDLLDGIGFDGDEEYELRGRVERLITEIEDELGIDDSEP
Ga0311364_116714662	3300031521	Fen	MTLGDHADAYRQVKEAWRDATEARQITMLDDLQDLLDGIGFNDDEEYELRGRVERLITDIEDELGIDESEP
Ga0311351_108843272	3300031722	Fen	MALHDDADAYRQVKDAWRDATEARQIIMLDDLRDLLDGIGFADDDEYELREKVERLILEIEDDLGIDESGL
Ga0302321_1021486022	3300031726	Fen	HADAYRRVKEAWKDATEARQITMLDDLQDLLDGIGFDDDEEYELRGRVERLITEIEYELGIDESEP
Ga0311367_107189801	3300031918	Fen	CMTLDDHADAYRQVKEAWKDATEARQIVMLDDLQDLLDGIGFDDDEEYELRERVERLITEIEDELGIDDSEP
Ga0311367_119865231	3300031918	Fen	YRQVKEAWRDATEARQITMLDDLQDLLDGIGFSDDEEYELRGRVERLITDIEYELGIDESEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F100041

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences