Basic Information | |
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Family ID | F097585 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 104 |
Average Sequence Length | 62 residues |
Representative Sequence | MSEIHYIEENLPHKVSEVICINCKHRWIAVRPCANKLKDLECPQCGKQGYVIETGEIIDNEEPF |
Number of Associated Samples | 44 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 48.48 % |
% of genes near scaffold ends (potentially truncated) | 8.65 % |
% of genes from short scaffolds (< 2000 bps) | 59.62 % |
Associated GOLD sequencing projects | 40 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.62 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (40.385 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (62.500 % of family members) |
Environment Ontology (ENVO) | Unclassified (95.192 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Animal → Animal proximal gut (60.577 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 3.26% β-sheet: 21.74% Coil/Unstructured: 75.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.62 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Lake Sediment Marine Sediment Goat Feces Rumen Cattle And Sheep Rumen Bovine Rumen Sheep Rumen Camel Rumen Corn Rhizosphere Miscanthus Rhizosphere Sugarcane Root And Bulk Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
BRPC2_02435950 | 2084038000 | Bovine Rumen | MAKIINIEENTPHKVSEVICIDCKHRWIAVRPTNTLLKDLECPQCWLQGYVIETGEQLKD |
DRAFT_102491616 | 3300002597 | Camel Rumen | MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATLLKDLECPQCGKQGYVIETGEIIDTEDYA* |
rootH2_101683691 | 3300003320 | Sugarcane Root And Bulk Soil | MSQVIDINANEPHKVSEVICVHCGWRWIAVRHVKTRLKDLECPDCRNRGKVIETGEILELE* |
Ga0068851_101404692 | 3300005834 | Corn Rhizosphere | MSDTIDINANQPHRVSEVICVHCGWRWIAVRPAETRLKDLECPDCTNQGKVIETGEVLPEEE* |
Ga0097621_10000010212 | 3300006237 | Miscanthus Rhizosphere | MSAKIMDIQAHDQHRVSEVICVHCGKRWISVRPVECLLKYLECPECTNQGYVIETGCETLKDD* |
Ga0120379_10202534 | 3300011979 | Sheep Rumen | MSEIHYIEENLPHRVSEVICINCKHRWIAVRPCKTKLKDLECPKCGKQGYVIETGEIIDNEEPF* |
Ga0120380_10033872 | 3300011989 | Sheep Rumen | MSEIHYIEENLPHKVSEVICVGCGKRWIAVRPMSTLLKDLECPQCGKQGYVIETGEIIDNEEPF* |
Ga0120382_10917661 | 3300012007 | Sheep Rumen | MAEIHYIEENLPHRVSVVICLKCLKRFVSVRPETTLLKDLECPQCGKQGYVIETGEIIDNEE* |
Ga0120387_10186103 | 3300012016 | Sheep Rumen | MEISIEENMPHKVSEVICIDCKYRWLAVRPTCTLLKDLECPRCGLQGYVIETGEIIKKGGEE* |
Ga0120387_10737723 | 3300012016 | Sheep Rumen | MSKAKVINIEENLPHKASEVICINCKYRWIAVRPEETLLKDLECPKCQTKGFVIKTGEVINYE* |
Ga0164315_100198477 | 3300013099 | Marine Sediment | MNEKIINIEENLPHKVSMVICLKCLNRWISVRPEKTKLIDLECSECGQGFAIETGEIIDDKI* |
Ga0120384_12548142 | 3300014057 | Sheep Rumen | MSEIHYIEENLPHKVSEVICINCKHRWIAVRPCKNKLKDLECAGCHKQGYVIETGELFDFGEESF* |
Ga0223824_101327023 | 3300021254 | Cattle And Sheep Rumen | MEISIDENLPHKVSEVIEVICINCKYRWIAVRPTDTLLKDLECPQCGQQGYVIETGEIINENE |
Ga0223824_102073292 | 3300021254 | Cattle And Sheep Rumen | MDIPDVKIVDINENTPHRVSEVICIECKHRWIAVRPTDTLLKELECPQCGIQGYVIETGEVINENKQL |
Ga0223824_103665344 | 3300021254 | Cattle And Sheep Rumen | MDNSDTKIIDINEDALHRVSEVICVKCTYRWLAVRPITTLLKDLECPWCGKQGFVIETGEIINENT |
Ga0223824_107614833 | 3300021254 | Cattle And Sheep Rumen | MSEVVDINANQPHKVSEVICINCKHRWVAVRPVVTQLVKLECPNCNEQGYVIETGEIIDE |
Ga0223825_101153403 | 3300021255 | Cattle And Sheep Rumen | MDNSDTKIIDINKDVLHRVSEVICVKCTYRWLAVRPITTLLKDLECPWCGKQGFVIETGEIINENT |
Ga0223825_103368406 | 3300021255 | Cattle And Sheep Rumen | MVNIVDINENTPHKVSEVICIYCKYRWLAVRPLDTLLKDLECPWCGMQGYVIETGEEINKEEEE |
Ga0223825_116901202 | 3300021255 | Cattle And Sheep Rumen | MEISIEENMPHKVSEVMCVNCKHRWIAVRPTNTLLKNLECPQCWLQGYVIETGEVINNNE |
Ga0223825_117945372 | 3300021255 | Cattle And Sheep Rumen | MMSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPCVCKLKDLQCPQCGKQGYVIETGEIIDTEDYA |
Ga0223826_109015723 | 3300021256 | Cattle And Sheep Rumen | MDIPDVKIVDINENTPHRVSEVICIECKHRWIAVRPTDTLLKELECPQCGIQGYVIETGEIINENKQL |
Ga0223845_102324682 | 3300021387 | Cattle And Sheep Rumen | MSEVVDINVNQPHKVSEVICVNCKHRWVAVRPVVTKLVKLECPNCNEQGYVIETGEIIDE |
Ga0223845_102324692 | 3300021387 | Cattle And Sheep Rumen | MSEVVDINANQPHKVSEVICINCKHRWVAVRPVVTQLVKLECPNCNKQGYVIETGEIIDE |
Ga0223845_104881544 | 3300021387 | Cattle And Sheep Rumen | MAEIHNIEENMPHKVSEVICINCKHRWIAARPCITQLKDLECPNCHEQGYVIETGEIMDADFD |
Ga0223845_1121774924 | 3300021387 | Cattle And Sheep Rumen | MSNIVDINENIPHKVSEVVCLSCLKRWLAVRPIGCKLRDIECPQCHKQGYVIETGEEYE |
Ga0223845_115289672 | 3300021387 | Cattle And Sheep Rumen | MDNSDAKIVDINENTPHRVSEVICVKCTYRWLAVRPITTLLKDLECPWCGKQGFVIETGEIINENT |
Ga0223845_122837892 | 3300021387 | Cattle And Sheep Rumen | DVLHRVSEVICVKCTYRWLAVRPITTLLKDLECPWCGKQGFVIETGEIINENT |
Ga0223845_129797124 | 3300021387 | Cattle And Sheep Rumen | MSEIHHIEENLPHRVSVVICLKCLKRFVSVRPATTLLKELECPQCHKQGYVIETGEIIDNEEPF |
Ga0224415_1000312916 | 3300021399 | Cattle And Sheep Rumen | MAKCKVIDIARNEPYKVSEVICVKCGKRWMAVRPETTLLKHLECPQCGNEGFVIETGEEIDG |
Ga0224415_106079923 | 3300021399 | Cattle And Sheep Rumen | MNEVVDINVNQPHKVSEVICINCKHRWVAVRPVVTQLVKLECPNCNEQGYVIETGEIIDE |
Ga0224415_109917542 | 3300021399 | Cattle And Sheep Rumen | MGTVVSMEENMPHVVSEVICVNCKHRWIDVRPEKLWLKQLECPNCKEVGYVIETGQIIDD |
Ga0224422_107708253 | 3300021400 | Cattle And Sheep Rumen | MKMAEIHYIEENQPHKVSEVICINCKHRWIAVRPCANKLKDLECACCHQQGYVIETGELFDFGEESF |
Ga0224422_124831764 | 3300021400 | Cattle And Sheep Rumen | MSEIHYIEENLPHRVSEVICINCKHRWIAVRPCKNKLKDLECAQCGKQGYVIETGEIIDTEDYA |
Ga0224482_108252292 | 3300021426 | Cattle And Sheep Rumen | NLPHKTSEVVCLGCLKRWIAVRPMATLLKELECPQCGKQGYVIETGEIIDTEESF |
Ga0224423_1000030981 | 3300021431 | Cattle And Sheep Rumen | MTKVIDIAENTPHKVSVVICLGCLKRFVSVRPVKTLLKDLECPQCHKRGFVIETGETIDEET |
Ga0214517_1023603 | 3300021540 | Goat Feces | MEISIDENKPHKVSEVICVKCLHRWIAVRPIECRLKDLECAGCGEQGYVIETGEVIDG |
Ga0255060_100040098 | 3300024337 | Rumen | MVTSIEENLPHKVSEVICIDCKYRWVAVRPTATLLKELECPQCRQQGYVIETGEIIND |
Ga0255061_103598123 | 3300024342 | Rumen | MDNSDTKIIDINEDALHRVSEVICVKCTYRWPAVRPITTLLKDLECPWCGKQGFVIETGEIINENT |
Ga0255059_100269582 | 3300024486 | Rumen | MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATLLKDLECPRCHKQGYVIETGEIIDTENYA |
Ga0207656_104147822 | 3300025321 | Corn Rhizosphere | MSDTIDINANQPHRVSEVICVHCGWRWIAVRPAETRLKDLECPDCTNQGKVIETGEVLPEEE |
Ga0256870_12526641 | 3300026525 | Rumen | MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATLLKELECQHCGKQGYVIETGEIIDVNKEPF |
Ga0256870_13524831 | 3300026525 | Rumen | MVFNFNRRLAMSTAEVIDIEENLPHKVSEVICINCRNRWIAVRPVKTLLKDLECPKCQTKGFIIETGEIIDYE |
Ga0256869_11706692 | 3300026526 | Rumen | MIMVNIVDINENTPHKVNEVICINCKYRWLAVRPIDTLLKDLECPYCSLQGYVIETGEEINKVEEE |
Ga0209777_105192302 | 3300027896 | Freshwater Lake Sediment | NVSDINKNEPHEASEVICINCKKRWVALRPQLTLLKDLQCPQCLQQGGVIETGEIIYELADE |
Ga0247611_101383723 | 3300028591 | Rumen | MSEIHYIEENLPHKVSEVICINCKHRWIAVRPCANKLKDLECPQCGKQGYVIETGEIIDNEEPF |
Ga0247611_103883003 | 3300028591 | Rumen | MFKWNSMKKMETTQIINIEEYQLHKVSEVICINCKHRWLAVRPASTWLKDLQCPECKQQGYVIETGQIIDRE |
Ga0247611_104981852 | 3300028591 | Rumen | MSEIHYIEENLPHKVSEVICINCKHRWVAVRPCVCKLKELECPECNKQGYVIETGEIFDFNEESF |
Ga0247611_106279762 | 3300028591 | Rumen | MVQEIDINENKPNKVSEVICVACHKRWIAVRLTKSRLKDLECPCCHKQGYVIETGEVIFDENE |
Ga0247611_122069592 | 3300028591 | Rumen | MDNPDVKIIDINENDLHRVSEVICVKCAYRWLAVRPVTTFLKDLECPWCGKQGFVIETGEIINENK |
Ga0247608_100018304 | 3300028805 | Rumen | MEISIDENLPHKVNEVMCINCKYRWIAVRPTDTLLKDLECPQCGQQGYVIETGEIINENK |
Ga0247608_1000538222 | 3300028805 | Rumen | MKDNPEIHSIDENTPHKVSEVICVQCAYRWLAVRPVVTRLKDLECPWCGKQGFVIETGEVIKE |
Ga0247608_101615022 | 3300028805 | Rumen | MSEIRYIESNLPHKTSEVVCLGCLKRWIAVRPMATLLKDLECPQCGKQGYVIETGEIIDN |
Ga0247608_111919302 | 3300028805 | Rumen | MSEVVYIGKNLEHKLSEVICTNCKHRWYAVRPKTTLLKELECPQCGKQGYVIETGEILEG |
Ga0265298_115081652 | 3300028832 | Rumen | MDSSDAKIVDINENTPHRVSEVICVKCAYRWLAVRPVTTLLKDLECPWCGKQGFVIETGEVINKNE |
Ga0247610_1000049031 | 3300028833 | Rumen | MNNTNTIDINELIPHKASEVVCLGCLKRWISVRPMTTLLKDLECPQCRQQGYVIETGETIGNIQE |
Ga0247610_1001385215 | 3300028833 | Rumen | MDIPDVKIVDINENTPHRVSEVICVKCAYRWLAVRPVTTLLKDLECPWCGKQGFVIETGEIINENK |
Ga0247610_101662213 | 3300028833 | Rumen | MIRDINENQPHTLSEVICINCKHRWLAVRPSDMWLKDIKCPYCNKKGYVINTGQEID |
Ga0247610_111849403 | 3300028833 | Rumen | MSEIHYIEENLPHRVSEVICINCKYRWIAVRPCKNKLKDLECAGCHKQGYVIETGEEYNEEGL |
Ga0256407_10000142254 | 3300028886 | Rumen | MIKDINENQPHKVSEVICIDCKYRWLAVRPTKTLLKDLECPRCGKQGYVIETGEIVEA |
Ga0247609_100030358 | 3300028888 | Rumen | MDEKVKYIEENIPHKVSEVICINCKRRWISVRPECTRLKQLECPGCGETGYVIETGEEINNDTE |
Ga0307249_113414402 | 3300029305 | Goat Feces | MSNIIQLETYLPHKTSEVICVKCYKRWIATRPVNVLLKELECPNCEKIGYVIETGEIIDEEENV |
Ga0326513_100691797 | 3300031760 | Rumen | MSEIHYIEENLPHRVSEVICINCKHRWIAVRPCKNKLKDLECAGCHKQGYVIETGELFDFGEESF |
Ga0326513_101365074 | 3300031760 | Rumen | MELLLGLSGYNLELMMSEIHYIEENLPHRVSEVICINCKHRWIAVRPCKNKLKDLECAGCHQQGYVIETGELFDFGEESF |
Ga0326513_101564743 | 3300031760 | Rumen | MIMGKTVDINENTPHKVSEVICVGCKYRWLAVRPVGTLLKDLECPHCGMQGYVIETGEEINKEEEE |
Ga0326513_106697264 | 3300031760 | Rumen | MEISIDENLPHKVSEVMCINCKYRWIAVRPTGTLLKDLECPQCRQQGYVIETGEVINENQ |
Ga0326513_106952152 | 3300031760 | Rumen | YIEENLPHRVSEVICINCKHRWIAVRPCKNSLKDLECTCCHQQGYVIETGELFDFGEESF |
Ga0326513_107610601 | 3300031760 | Rumen | LFKKVLQTKKMSEIHYIEENLPHKTSEVVCLWCLKRWIAVRPMATLLKNLECPQCHKQGYVIETGEIIDTEDYA |
Ga0326513_109696262 | 3300031760 | Rumen | MSEIHYIEECMPHKTSEVVCIVCLKRWIAARPMATLLKDIECPQCGKQGYVIETGGIINTEDYV |
Ga0326513_112363712 | 3300031760 | Rumen | MSETHYIEENLPHKTSEVVCLGCLKRWIAVRPIATLLKELECPQCGKQGFVIETGEIIDIEDYA |
Ga0326513_116315712 | 3300031760 | Rumen | IHYIEENLPHKVSEVICVNCKHRWIAVRPSTTFLKVLQCPNCKKSGYVIETGETIDYIQE |
Ga0326514_1000346211 | 3300031853 | Rumen | MAEIHNIEENMPHKVSEVICINCKHRWMAVRPCVTQLKDLECPNCHEQGYVIETGEILVDADFD |
Ga0326514_101120896 | 3300031853 | Rumen | MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATLLKDLECPQCHKQGYVIETGEIIDIEDYA |
Ga0326514_101165653 | 3300031853 | Rumen | MSEIHYIEEKLPHKTSEVVCLGCLKRWIAVRPMATLLKDLECPQCHKQGYVIETGEIIDSEDYT |
Ga0326514_101386632 | 3300031853 | Rumen | MSEIHYIEENLPHKVSEVICINCKHRWIAVRPCACKLKDLECACCHQQGYVIETGEIIDAEDYA |
Ga0326514_107963533 | 3300031853 | Rumen | MDSPNAKIVDMNENTPHRVSEVICVKCTYRWLAVRPVITLLKDLECPWCGKQGFVIETGEVINEK |
Ga0326514_114989812 | 3300031853 | Rumen | MSEIHYIEENLPHKVSEVICINCKHRWIAVRPCANKLKDLECPQCGKQGYVIETGEIIDTRELC |
Ga0326514_116388502 | 3300031853 | Rumen | MEISIEENMPHKVSEVMCINCKHRWIAIRPTSTLLKSLECPKCGKQGFVIETGEQLKDK |
Ga0326511_100666396 | 3300031867 | Rumen | MGEIHYIEENLPHRVSEVICINCKHRWIAVRPCKNKLKDLECAGCHKQGYVIETGELFDFGEESF |
Ga0326511_105135722 | 3300031867 | Rumen | MQVSIEENIPHKVSEVICVDCKHRWIAVRPTDTLLKDLECPLCGLQGYVIETGEELKDK |
Ga0326511_110841321 | 3300031867 | Rumen | MAKITSIEENMPHKVSEVICVDCKHRWIAVRPTDTLLKDLECPLCGLQGYVIETGEQLKD |
Ga0326511_111694821 | 3300031867 | Rumen | MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATLLKDLECPQCHKQGYVIETGEIIDI |
Ga0326511_111985263 | 3300031867 | Rumen | MSEIHYIEENLPHKVSEVICIECKHRWIAVRPCACKLKDLECPQCGKQGYVIETGEIIDTEDYA |
Ga0326511_113228372 | 3300031867 | Rumen | MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATLLKDLKCPKCGKQGYVIETGEIIDTEDYA |
Ga0326511_113641592 | 3300031867 | Rumen | MSEIHYIEENLPHRVSEVICINCKHRWIAVRPCKNKLKDLECAGCHKRGYVIETGELFDFGEE |
Ga0310696_111731672 | 3300031993 | Rumen | MSEIHYIEENLPHKTSEVICLGCLKRWIAVRPMATLLKDLECPQCGKQGYVIETGEIIDSEDYV |
Ga0310691_114402732 | 3300031994 | Rumen | MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATLLKDLECPHCHKQGYVIETGEIIDFGEESF |
Ga0310786_100905672 | 3300031998 | Rumen | MKVDINEKTPHKVSEVVCLSCLHRWIAVRPCTCKLKDLECAGCHRQGYVIETGETFDE |
Ga0310786_103712523 | 3300031998 | Rumen | MIKDINDNQPHKVSEVICIDCKYRWLAVRPTKTLLKDLECPRCGKQGYVIETGEIIDT |
Ga0310786_110723333 | 3300031998 | Rumen | MNVTNIDEYLPHKISEVICINCKYRWIAIRGESVLLKNLECPKCNQAGFVINTGEDLLENLSQ |
Ga0310695_100083969 | 3300032007 | Rumen | MSEIHYIEENLPHKVSEVICVGCGKRWIAVRPMATLLKDLECPQCGKQGYVIETGEIINQEDYV |
Ga0310695_101709886 | 3300032007 | Rumen | MSMGKTVDINENTPHKVSEVICINCKYRWLAVRPVGTLLKDLECPICGAGYVIETGEEINTDEE |
Ga0310697_118542812 | 3300032030 | Rumen | MTNIIDINENVSHKVSEVICINCKYRWLAVRPTATLLKELECPQCRQQGYVIETGEIIND |
Ga0326512_1000879514 | 3300032038 | Rumen | MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATLLKELECPQCGKQGYVIETGEIIDTEDYV |
Ga0326512_100579469 | 3300032038 | Rumen | PHRVSEVICINCKHRWIAVRPCKNKLKDLECAGCHKQGYVIETGELFDFGEESF |
Ga0326512_101055397 | 3300032038 | Rumen | MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATRLKDLECPQCHNQGYVIETGEEYNEEGL |
Ga0326512_102445944 | 3300032038 | Rumen | MSKAEVINIEENMPHKVSEVICINCKHRWIAVRPCVCKLKDLQCPQCGKQGYVIETGEVIDYE |
Ga0326512_103992244 | 3300032038 | Rumen | MSEIHYIEENLPHRVSEVICINCKHRWIAVRPCKNKLKDLECAGCHKQGYVIE |
Ga0326512_104667693 | 3300032038 | Rumen | MEKIVDINEYKPHRVSEVICINCKYRWIAVRLSTYKLRNLECAGCHKRGYVIETGEIFDENGN |
Ga0326512_106183434 | 3300032038 | Rumen | MSEIHYIEENLPHKTSEVVCLGCLKRWIAVRPMATLLKELECPQCGKQGYVIETREIIDTEDYT |
Ga0326512_108476821 | 3300032038 | Rumen | MSKTKVINIEENIPHKVSEVICINCKYRWIDVRPCACKLKDLECPQCSKQGYVIETGEAIDYE |
Ga0326512_112138872 | 3300032038 | Rumen | MSKIHYIEENLPHKVSEVICVNCKHRWIAVRPSTTFLKVLQCPNCKKSGYVIETGEIIDTEDYA |
Ga0326512_112836172 | 3300032038 | Rumen | MSKAEVIDIEENLPHKVSEVICINCKNRWIAVRPEKTLLKDLECSKCGKQGYVIETGEVIEL |
Ga0310690_100637149 | 3300033463 | Rumen | MAEIHYIEENMPHKVSEVICINCKHRWVAVRPCATKLKDLECPHCHEQGFVIETGEIMVDADFD |
Ga0310690_125355691 | 3300033463 | Rumen | MSDIVDITENLPHKVSEVICVKCGHRWIAVRPSDTKLRELECPNCTKQGYAIE |
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