Metagenome / Metatranscriptome Family F086145

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086145
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	51 residues
Representative Sequence	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Number of Associated Samples	83
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.28 %
% of genes near scaffold ends (potentially truncated)	28.83 %
% of genes from short scaffolds (< 2000 bps)	73.87 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.369 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (24.324 % of family members)
Environment Ontology (ENVO)	Unclassified (90.090 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (84.685 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.62% β-sheet: 23.08% Coil/Unstructured: 42.31%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF10066	DUF2304	33.33
PF00534	Glycos_transf_1	28.83
PF00535	Glycos_transf_2	19.82
PF04240	Caroten_synth	0.90
PF04321	RmlD_sub_bind	0.90
PF01370	Epimerase	0.90
PF13439	Glyco_transf_4	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	1.80
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	1.80
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	1.80
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	0.90
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG2324	Uncharacterized membrane protein	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.37 %
Unclassified	root	N/A	30.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.37 %
Unclassified	root	N/A	30.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.37 %
Unclassified	root	N/A	30.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	27.03 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	27.03 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.70 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Nitrospinia	class	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia	27.03 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	2.70 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Nitrospinales	order	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales	27.03 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	2.70 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Nitrospinaceae	family	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae	27.03 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	2.70 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Nitrospina	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	25.23 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	2.70 %
unclassified Nitrospinaceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae	0.90 %
Candidatus Nitromaritima	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Candidatus Nitromaritima	0.90 %
Desulfatibacillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
unclassified Nitrospina	no rank	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina	3.60 %
Nitrospina gracilis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → Nitrospina gracilis	2.70 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	2.70 %
Nitrospinaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	0.90 %
Candidatus Nitromaritima sp. SCGC AAA799-C22	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Candidatus Nitromaritima → Candidatus Nitromaritima sp. SCGC AAA799-C22	0.90 %
Desulfatibacillum alkenivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum → Desulfatibacillum alkenivorans	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.63 %
Nitrospina sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina → Nitrospina sp.	3.60 %
Nitrospina gracilis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → Nitrospina gracilis	2.70 %
Candidatus Fervidibacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	2.70 %
Nitrospinaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	0.90 %
Candidatus Nitromaritima sp. SCGC AAA799-C22	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Candidatus Nitromaritima → Candidatus Nitromaritima sp. SCGC AAA799-C22	0.90 %
Desulfatibacillum alkenivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum → Desulfatibacillum alkenivorans	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000179\|LPjun09P16500mDRAFT_c1048326	Not Available	555	Open in IMG/M
3300000222\|LPjun09P12500mDRAFT_1022798	Not Available	1216	Open in IMG/M
3300000248\|LPfeb09P12500mDRAFT_1011992	Not Available	1160	Open in IMG/M
3300000257\|LP_F_10_SI03_100DRAFT_1055905	Not Available	598	Open in IMG/M
3300001683\|GBIDBA_10040251	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3575	Open in IMG/M
3300002526\|JGI24818J35693_1011852	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300002528\|JGI24819J35694_1011314	All Organisms → cellular organisms → Bacteria	2004	Open in IMG/M
3300002965\|JGI26063J44948_1098962	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300003498\|JGI26239J51126_1014391	All Organisms → cellular organisms → Bacteria	2007	Open in IMG/M
3300003501\|JGI26243J51142_1012210	Not Available	2298	Open in IMG/M
3300003585\|JGI26249J51723_1004762	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → Nitrospina gracilis	3612	Open in IMG/M
3300003587\|JGI26256J51712_1010154	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300003596\|JGI26255J51710_1011696	All Organisms → cellular organisms → Bacteria	2168	Open in IMG/M
3300003979\|Ga0063037_119214	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300004280\|Ga0066606_10082051	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300005399\|Ga0066860_10193933	Not Available	692	Open in IMG/M
3300005400\|Ga0066867_10155995	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300005400\|Ga0066867_10301495	Not Available	574	Open in IMG/M
3300005427\|Ga0066851_10236482	Not Available	570	Open in IMG/M
3300005509\|Ga0066827_10038696	All Organisms → cellular organisms → Bacteria	1889	Open in IMG/M
3300005948\|Ga0066380_10016277	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300006011\|Ga0066373_10220005	Not Available	555	Open in IMG/M
3300006013\|Ga0066382_10236289	Not Available	630	Open in IMG/M
3300006076\|Ga0081592_1035241	All Organisms → cellular organisms → Bacteria	2455	Open in IMG/M
3300006166\|Ga0066836_10483094	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300006308\|Ga0068470_1086897	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	1609	Open in IMG/M
3300006308\|Ga0068470_1136391	All Organisms → cellular organisms → Bacteria	3088	Open in IMG/M
3300006308\|Ga0068470_1444201	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300006310\|Ga0068471_1127839	All Organisms → cellular organisms → Bacteria	4477	Open in IMG/M
3300006310\|Ga0068471_1141608	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → Nitrospina gracilis	6920	Open in IMG/M
3300006310\|Ga0068471_1192795	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	1815	Open in IMG/M
3300006310\|Ga0068471_1207080	All Organisms → cellular organisms → Bacteria	1915	Open in IMG/M
3300006310\|Ga0068471_1519037	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300006310\|Ga0068471_1572086	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300006310\|Ga0068471_1572087	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300006310\|Ga0068471_1590086	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300006313\|Ga0068472_10145427	All Organisms → cellular organisms → Bacteria	7131	Open in IMG/M
3300006313\|Ga0068472_10200133	All Organisms → cellular organisms → Bacteria	4660	Open in IMG/M
3300006313\|Ga0068472_10915261	Not Available	509	Open in IMG/M
3300006323\|Ga0068497_1141806	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum → Desulfatibacillum alkenivorans	986	Open in IMG/M
3300006323\|Ga0068497_1211862	Not Available	534	Open in IMG/M
3300006324\|Ga0068476_1221298	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300006331\|Ga0068488_1606054	Not Available	852	Open in IMG/M
3300006335\|Ga0068480_1120757	All Organisms → cellular organisms → Bacteria	4927	Open in IMG/M
3300006335\|Ga0068480_1422423	Not Available	1058	Open in IMG/M
3300006335\|Ga0068480_1833253	Not Available	571	Open in IMG/M
3300006336\|Ga0068502_1171779	All Organisms → cellular organisms → Bacteria	4095	Open in IMG/M
3300006336\|Ga0068502_1172414	Not Available	658	Open in IMG/M
3300006336\|Ga0068502_1172416	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300006339\|Ga0068481_1437930	All Organisms → cellular organisms → Bacteria	2469	Open in IMG/M
3300006339\|Ga0068481_1439660	Not Available	4247	Open in IMG/M
3300006339\|Ga0068481_1464522	All Organisms → cellular organisms → Bacteria	3763	Open in IMG/M
3300006339\|Ga0068481_1511107	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fervidibacteria	1890	Open in IMG/M
3300006339\|Ga0068481_1541519	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300006340\|Ga0068503_10327444	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → Nitrospina gracilis	2784	Open in IMG/M
3300006341\|Ga0068493_10364221	All Organisms → cellular organisms → Bacteria	2336	Open in IMG/M
3300006414\|Ga0099957_1173393	All Organisms → cellular organisms → Bacteria	1352	Open in IMG/M
3300006567\|Ga0099958_1171601	Not Available	848	Open in IMG/M
3300007758\|Ga0105668_1096722	All Organisms → cellular organisms → Bacteria	3000	Open in IMG/M
3300008251\|Ga0105359_10174128	Not Available	1145	Open in IMG/M
3300008736\|Ga0115659_138366	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300009376\|Ga0118722_1069800	All Organisms → cellular organisms → Bacteria	2603	Open in IMG/M
3300009706\|Ga0115002_10387209	Not Available	1037	Open in IMG/M
3300010883\|Ga0133547_10188847	Not Available	4409	Open in IMG/M
3300020254\|Ga0211669_1029147	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300020256\|Ga0211645_1020469	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1123	Open in IMG/M
3300020263\|Ga0211679_1016116	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1612	Open in IMG/M
3300020285\|Ga0211602_1032551	Not Available	745	Open in IMG/M
3300020344\|Ga0211570_1129580	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	529	Open in IMG/M
3300020373\|Ga0211660_10134091	Not Available	904	Open in IMG/M
3300020389\|Ga0211680_10027450	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	2834	Open in IMG/M
3300020412\|Ga0211552_10310182	Not Available	578	Open in IMG/M
3300020444\|Ga0211578_10139402	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	956	Open in IMG/M
3300021068\|Ga0206684_1060816	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1306	Open in IMG/M
3300021084\|Ga0206678_10128189	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1295	Open in IMG/M
3300021089\|Ga0206679_10144778	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1355	Open in IMG/M
3300021443\|Ga0206681_10197808	Not Available	785	Open in IMG/M
(restricted) 3300022902\|Ga0233429_1250171	Not Available	603	Open in IMG/M
3300025665\|Ga0209360_1175753	Not Available	574	Open in IMG/M
3300025672\|Ga0209663_1032744	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Candidatus Nitromaritima → Candidatus Nitromaritima sp. SCGC AAA799-C22	1831	Open in IMG/M
3300025688\|Ga0209140_1045235	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina → Nitrospina sp.	1537	Open in IMG/M
3300025688\|Ga0209140_1102255	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → unclassified Nitrospinaceae → Nitrospinaceae bacterium	885	Open in IMG/M
3300025722\|Ga0209660_1043213	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina → Nitrospina sp.	1727	Open in IMG/M
3300025722\|Ga0209660_1182149	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300026082\|Ga0208750_1015215	Not Available	1901	Open in IMG/M
3300026091\|Ga0207962_1012864	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	2227	Open in IMG/M
3300026092\|Ga0207965_1031529	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1263	Open in IMG/M
3300026119\|Ga0207966_1074051	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	836	Open in IMG/M
3300026207\|Ga0208895_1052363	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1161	Open in IMG/M
3300026279\|Ga0208411_1053101	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1263	Open in IMG/M
3300027699\|Ga0209752_1019584	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	2583	Open in IMG/M
3300027709\|Ga0209228_1089319	Not Available	968	Open in IMG/M
3300027827\|Ga0209035_10395918	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300027838\|Ga0209089_10414984	Not Available	743	Open in IMG/M
3300027844\|Ga0209501_10081791	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300028174\|Ga0257123_1050149	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1052	Open in IMG/M
3300028192\|Ga0257107_1038615	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1494	Open in IMG/M
3300028487\|Ga0257109_1062403	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1175	Open in IMG/M
3300031606\|Ga0302119_10059584	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1583	Open in IMG/M
3300031646\|Ga0302133_10137039	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300031757\|Ga0315328_10138893	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1412	Open in IMG/M
3300031757\|Ga0315328_10547622	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300031757\|Ga0315328_10864130	Not Available	503	Open in IMG/M
3300031775\|Ga0315326_10194760	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	1333	Open in IMG/M
3300031886\|Ga0315318_10326596	Not Available	879	Open in IMG/M
3300031886\|Ga0315318_10351747	Not Available	845	Open in IMG/M
3300031886\|Ga0315318_10862247	Not Available	502	Open in IMG/M
3300032048\|Ga0315329_10020566	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	3024	Open in IMG/M
3300032360\|Ga0315334_10307813	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina → Nitrospina sp.	1320	Open in IMG/M
3300032360\|Ga0315334_10661688	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300032820\|Ga0310342_100839020	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina → unclassified Nitrospina → Nitrospina sp.	1066	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	61.26%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	22.52%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.91%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.70%
Inlet	Environmental → Aquatic → Marine → Inlet	1.80%
Coastal	Environmental → Aquatic → Marine → Coastal	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	27.03%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	23.42%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	22.52%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	10.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.91%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.80%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.80%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	24.32%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	22.52%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	12.61%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	10.81%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	9.91%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.01%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.80%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.80%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.90%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.90%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.90%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.90%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	0.90%
Diffuse Hydrothermal Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Vent	0.90%
Diffuse Hydrothermal Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Fluids	0.90%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000179	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 500m	Environmental	Open in IMG/M
3300000222	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500m	Environmental	Open in IMG/M
3300000248	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2009 P12 500m	Environmental	Open in IMG/M
3300000257	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_F_10_SI03_100	Environmental	Open in IMG/M
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental	Open in IMG/M
3300002526	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m	Environmental	Open in IMG/M
3300002528	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_800m	Environmental	Open in IMG/M
3300002965	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - NADW_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300003498	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNA	Environmental	Open in IMG/M
3300003501	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_130m_DNA	Environmental	Open in IMG/M
3300003585	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_135m_DNA	Environmental	Open in IMG/M
3300003587	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_150m_DNA	Environmental	Open in IMG/M
3300003596	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI073_LV_135m_DNA	Environmental	Open in IMG/M
3300003979	Diffuse hydrothermal vent microbial communities from Menez Gwen hydrothermal field, Mid Atlantic ridge - MGW_B	Environmental	Open in IMG/M
3300004280	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI075_LV_DNA_100m	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005509	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51	Environmental	Open in IMG/M
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental	Open in IMG/M
3300006011	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV	Environmental	Open in IMG/M
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental	Open in IMG/M
3300006076	Microbial communities in diffuse hydrothermal fluids of Manus Basin, Bismarck Sea ? fluid A	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental	Open in IMG/M
3300006323	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0500m	Environmental	Open in IMG/M
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental	Open in IMG/M
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental	Open in IMG/M
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental	Open in IMG/M
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006567	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0770m	Environmental	Open in IMG/M
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300008251	Methane-oxidizing microbial communities from mesocosms in the Gulf of Mexico - GOM8C Gulf of Mexico	Environmental	Open in IMG/M
3300008736	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 200m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300009376	Combined Assembly of Gp0137079, Gp0137080	Environmental	Open in IMG/M
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300020254	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555924-ERR599085)	Environmental	Open in IMG/M
3300020256	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556010-ERR599067)	Environmental	Open in IMG/M
3300020263	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX555942-ERR599125)	Environmental	Open in IMG/M
3300020285	Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555972-ERR599034)	Environmental	Open in IMG/M
3300020344	Marine microbial communities from Tara Oceans - TARA_B100001964 (ERX556104-ERR598987)	Environmental	Open in IMG/M
3300020373	Marine microbial communities from Tara Oceans - TARA_B100000959 (ERX555949-ERR598946)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020412	Marine microbial communities from Tara Oceans - TARA_B100001167 (ERX556053-ERR599047)	Environmental	Open in IMG/M
3300020444	Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)	Environmental	Open in IMG/M
3300021068	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021089	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015	Environmental	Open in IMG/M
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental	Open in IMG/M
3300022902 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_118_April2016_135_MG	Environmental	Open in IMG/M
3300025665	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025672	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI073_LV_135m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025688	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_120m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025722	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_100m_DNA (SPAdes)	Environmental	Open in IMG/M
3300026082	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV (SPAdes)	Environmental	Open in IMG/M
3300026091	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_AAIW_ad_750m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026092	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV (SPAdes)	Environmental	Open in IMG/M
3300026119	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026207	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV82 (SPAdes)	Environmental	Open in IMG/M
3300026279	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261 (SPAdes)	Environmental	Open in IMG/M
3300027699	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_250m (SPAdes)	Environmental	Open in IMG/M
3300027709	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_150m (SPAdes)	Environmental	Open in IMG/M
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental	Open in IMG/M
3300028174	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI106_135	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300028487	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000m	Environmental	Open in IMG/M
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental	Open in IMG/M
3300031646	Marine microbial communities from Western Arctic Ocean, Canada - CB9_33.1	Environmental	Open in IMG/M
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
LPjun09P16500mDRAFT_10483262	3300000179	Marine	MRRIVCKAYAGYWEGIFYTQAASRGXLKLLVFFLIWQKKTTVSLKIXIIVRV*
LPjun09P12500mDRAFT_10227983	3300000222	Marine	MRRIVCKGCAGYLGGIFYTQAXSRGXLKLLAFFLIWQKKTTVSLKIXIIVRV*
LPfeb09P12500mDRAFT_10119922	3300000248	Marine	MRRIVCKAYAGYWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV*
LP_F_10_SI03_100DRAFT_10559052	3300000257	Marine	MRRIAXKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIXIIVRV*
GBIDBA_100402517	3300001683	Hydrothermal Vent Plume	MRRIVCKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV*
JGI24818J35693_10118522	3300002526	Marine	MRRIVCKGYAGCWGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
JGI24819J35694_10113142	3300002528	Marine	MRRIVCKAYAGYWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV*
JGI26063J44948_10989621	3300002965	Marine	MRRIVCKGYAGCWGGIFYTQAASRGYLKLLAFFLIWQKKTTVRLKIPIIVRV*
JGI26239J51126_10143913	3300003498	Marine	MRRIARKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV*
JGI26243J51142_10122101	3300003501	Marine	MRRIACKGCAGYWGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV*
JGI26249J51723_10047622	3300003585	Marine	MRRIACKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV*
JGI26256J51712_10101542	3300003587	Marine	MRRIAXKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV*
JGI26255J51710_10116963	3300003596	Marine	MRRIACKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV*
Ga0063037_1192142	3300003979	Diffuse Hydrothermal Vent	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0066606_100820511	3300004280	Marine	MRRIACKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKI
Ga0066860_101939331	3300005399	Marine	MRRIICKGYAGCWGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKVPIIVRV*
Ga0066867_101559952	3300005400	Marine	MRRIVCKGYADYWEGIFYIQAASRAYLKLLVFFLIWQKKTTVSLKIPIIVRV*
Ga0066867_103014951	3300005400	Marine	MRRIVYKECAGCWEGIFYTQAVSRGYLKFLAFFLIWQKKTTVSLKIPI
Ga0066851_102364821	3300005427	Marine	MRRIVCKGYADYWEGIFYIQAASRAYLKLLVFFLIWQKKTTVSLKIPIIV
Ga0066827_100386961	3300005509	Marine	MRRIVCKGYADCWEGIFYIQAASRAYLKLLVFFLIWQKKTTVSLKIPIIVRV*
Ga0066380_100162773	3300005948	Marine	MRRIVCKGYAGCWGDIFYIQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0066373_102200052	3300006011	Marine	MRRIVCKGYAGCWEDIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0066382_102362892	3300006013	Marine	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTV
Ga0081592_10352414	3300006076	Diffuse Hydrothermal Fluids	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVRLKIPIIVRV*
Ga0066836_104830942	3300006166	Marine	MRRIVCKGYAGYWGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068470_10868971	3300006308	Marine	YWGDIFYTQATNRGYLKLLAFFLIWQKKTTVSLKISIIVRV*
Ga0068470_11363915	3300006308	Marine	MRRIVCKGYAGCWGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKISIIVRV*
Ga0068470_14442012	3300006308	Marine	MRRKVCKGYAGCSEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVSV*
Ga0068471_11278397	3300006310	Marine	MRRIVCKGYAGCSEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKISIIVRV*
Ga0068471_11416087	3300006310	Marine	MRRIVCKGYAGCREGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068471_11927953	3300006310	Marine	CADYWGDIFYTQATNRGYLKLLAFFLIWQKKTTVSLKISIIVRV*
Ga0068471_12070802	3300006310	Marine	MRRKVCKGYAGCSEGIFYTQAASRGYLKLLAFFLIWQKKTTVGLKIPVIVCV*
Ga0068471_15190374	3300006310	Marine	MRRKVCMGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068471_15720862	3300006310	Marine	MRRIVCKGCAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068471_15720873	3300006310	Marine	MRRIVCKGYAGYWGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVSV*
Ga0068471_15900863	3300006310	Marine	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV*
Ga0068472_101454275	3300006313	Marine	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKISIIVRV*
Ga0068472_102001334	3300006313	Marine	MRRIVCKAYAGYWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068472_109152612	3300006313	Marine	VCKAYVGYWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV*
Ga0068497_11418063	3300006323	Marine	ADYWGDIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068497_12118622	3300006323	Marine	CKGYAGYWGGIFYIQAASRGYLKLLAFFLIWQKKTTVSLKITIIVRV*
Ga0068476_12212982	3300006324	Marine	MRRIVCKGYAGCWGGIFYTQGASRGYLKLLAFFLIWQKKTTVSLKISIIVRV*
Ga0068488_16060541	3300006331	Marine	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKVPIIVRV*
Ga0068480_11207575	3300006335	Marine	MRRKVCKGYAGCSEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068480_14224232	3300006335	Marine	MRRIVCKGYAGCWGGIFYTQAASHGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068480_18332531	3300006335	Marine	MRRIVCKGYAGCWEDIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIERV*
Ga0068502_11717795	3300006336	Marine	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV*
Ga0068502_11724141	3300006336	Marine	RRIVCKAYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068502_11724162	3300006336	Marine	MRRIVCKGCAGYLGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVSV*
Ga0068481_14379302	3300006339	Marine	MRRIVCKGDAGCWGGIFYTQGASHGYLKLLAFFLIWQKKTTVSLKVPIIVSV*
Ga0068481_14396604	3300006339	Marine	MRRIVCKGYAGCSEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068481_14645224	3300006339	Marine	MRRKVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068481_15111071	3300006339	Marine	MRRIVCKAYAGYWEGIFYTQVASRGYLKLLVFFLIWQKKTTVSLKISIIVRV*
Ga0068481_15415192	3300006339	Marine	MRRIVCKGYADCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0068503_103274442	3300006340	Marine	MRRIVCKGYADCWEGIFYIQAASRGYLKLLVFFLIWQKKTAVSLKIPIIVRV*
Ga0068493_103642212	3300006341	Marine	MRRIVCKGYAGCWGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV*
Ga0099957_11733932	3300006414	Marine	MRRKVCKGYAGCWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV*
Ga0099958_11716012	3300006567	Marine	AYAGYWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV*
Ga0105668_10967224	3300007758	Background Seawater	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVGLKISVIVRV*
Ga0105359_101741282	3300008251	Methane Seep Mesocosm	MRRIVCKGYAGCWEGIFYTQEASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0115659_1383661	3300008736	Marine	MSMRRIVYKGRAGYLGDIFYIQAGSRGYLKFLACFLIWQKKTTVSL
Ga0118722_10698003	3300009376	Marine	MSMRRIVCKGCAGCWEGIFYTQGESRGYLKLLAFFLIWQKKTTVSLKVPIIVRV*
Ga0115002_103872092	3300009706	Marine	MRHIACMGYAGCWGGIFYTQGESRGYLKLLAFFLIWQKKTTVSLKIPIIVRV*
Ga0133547_101888477	3300010883	Marine	MRHIACMGYAGCWGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV*
Ga0211669_10291471	3300020254	Marine	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0211645_10204692	3300020256	Marine	MRRIVCKGYAGCWGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKISIIVRV
Ga0211679_10161162	3300020263	Marine	MRRIVCKGYAGCWGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0211602_10325511	3300020285	Marine	CADYWGDIFYTQATNRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0211570_11295802	3300020344	Marine	MRRIVYKECAGCWEGIFYTQAVSRGYLKFLAFFLIWQKKTTVSLKIPIIVRV
Ga0211660_101340912	3300020373	Marine	KVCKGYADCWEGIFYIQAASRAYLKLLVFFLIWQKKTTVSLKIPIIVRV
Ga0211680_100274505	3300020389	Marine	MRRIVCKGYAGCWGGIFYTQAASRGYLKLLAFFLIWQKKTTVRLKIPIIVRV
Ga0211552_103101821	3300020412	Marine	SMRRKVCKGYAGCSEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0211578_101394022	3300020444	Marine	MRRKVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0206684_10608162	3300021068	Seawater	MRRIVCKAYAGCWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV
Ga0206678_101281893	3300021084	Seawater	MRRKVCKGYAGCSEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKISIIVRV
Ga0206679_101447783	3300021089	Seawater	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV
Ga0206681_101978082	3300021443	Seawater	SMRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
(restricted) Ga0233429_12501712	3300022902	Seawater	MRRIACKGGAGYRGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0209360_11757531	3300025665	Marine	RSMRRIACKGCAGYLGGIFYPQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV
Ga0209663_10327443	3300025672	Marine	MRRIVCKGCAGYLGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0209140_10452353	3300025688	Marine	SMRRIVRKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV
Ga0209140_11022551	3300025688	Marine	MRRIACKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISI
Ga0209660_10432133	3300025722	Marine	RRIARKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV
Ga0209660_11821492	3300025722	Marine	MRRIVCKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSL
Ga0208750_10152152	3300026082	Marine	MRHIVCKAYAGYWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0207962_10128642	3300026091	Marine	MHRIVCKGHAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0207965_10315292	3300026092	Marine	MRRIICKGYAGCWEDIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0207966_10740512	3300026119	Marine	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKISIIVRV
Ga0208895_10523632	3300026207	Marine	MRRIVCKGYAGCWEDIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0208411_10531012	3300026279	Marine	MRRIVCKGYADYWEGIFYIQAASRAYLKLLVFFLIWQKKTTVSLKIPIIVRV
Ga0209752_10195843	3300027699	Marine	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV
Ga0209228_10893191	3300027709	Marine	KGCADYWGDIFYTQATNRGYLKLLAFFLIWQKKTTVSLKISIIVRV
Ga0209035_103959181	3300027827	Marine	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKV
Ga0209089_104149841	3300027838	Marine	MRHIACMGYAGCWGGIFYTQGESRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0209501_100817913	3300027844	Marine	MRHIACMGYAGCWGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV
Ga0257123_10501493	3300028174	Marine	CAGYLGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0257107_10386152	3300028192	Marine	MRRIVCKAYAGYWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV
Ga0257109_10624031	3300028487	Marine	IVCKEYAGCWGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0302119_100595841	3300031606	Marine	MRRIVCKGYAGCWGGIFYTQAASREYLKLLAFFLIWQKKTTVRLKIPIIVRV
Ga0302133_101370393	3300031646	Marine	MRHIACMGYAGCWGGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0315328_101388932	3300031757	Seawater	MRHIVCKAYAGYWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV
Ga0315328_105476221	3300031757	Seawater	MRRIVCKGYAGCWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRE
Ga0315328_108641301	3300031757	Seawater	VCKGYAGCWEGISYTQAASHGYLKLLAFFLIWQKKTTVSLKISIIMRV
Ga0315326_101947603	3300031775	Seawater	MRRIVCKGYAGYWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKISIIVRV
Ga0315318_103265962	3300031886	Seawater	WEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV
Ga0315318_103517471	3300031886	Seawater	IVYKACVGYLGDIFYTQVGIRGYLKLSAFFLIWQKKTTVSLKIAIIVCM
Ga0315318_108622472	3300031886	Seawater	MRRKVCKGYAGCSEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKIPIIVRV
Ga0315329_100205665	3300032048	Seawater	MRRIVCKAYVGYWEGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKISIIVRV
Ga0315334_103078133	3300032360	Seawater	LRKPSRSTHRIVYKGYADYWGGIFYTQAANHGYLKLLAFFLIGQKKTTVGLKVPIIVRV
Ga0315334_106616882	3300032360	Seawater	MRRIARKGCAGYLGGIFYTQAASRGYLKLLVFFLIWQKKTTVSLKIPIIVRV
Ga0310342_1008390202	3300032820	Seawater	MRRIVCKAYAGYWEGIFYTQAASRGYLKLLAFFLIWQKKTTVSLKISIIVRV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters