Metagenome Family F085267

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085267
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	49 residues
Representative Sequence	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSSRARFRFT
Number of Associated Samples	98
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.79 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.297 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (29.730 % of family members)
Environment Ontology (ENVO)	Unclassified (39.640 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.468 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 31.25% Coil/Unstructured: 68.75%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF13683	rve_3	72.07
PF01527	HTH_Tnp_1	20.72
PF00665	rve	2.70
PF13565	HTH_32	1.80
PF13276	HTH_21	1.80
PF13408	Zn_ribbon_recom	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	2.70
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	2.70
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	2.70
COG4584	Transposase	Mobilome: prophages, transposons [X]	2.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.30 %
Unclassified	root	N/A	2.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.30 %
Unclassified	root	N/A	2.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.30 %
Unclassified	root	N/A	2.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	28.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.91 %
Unclassified	root	N/A	2.70 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.91 %
Unclassified	root	N/A	2.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	10.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.91 %
Unclassified	root	N/A	2.70 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	10.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.91 %
Unclassified	root	N/A	2.70 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	10.81 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.91 %
Unclassified	root	N/A	2.70 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	9.91 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.60 %
Unclassified	root	N/A	2.70 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1.80 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000658\|JGI12336J11891_10035	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1298	Open in IMG/M
3300000660\|JGI12415J11908_10043	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1413	Open in IMG/M
3300000662\|JGI12492J11902_10162	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300000685\|JGI12297J11905_100160	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1413	Open in IMG/M
3300000707\|JGI12295J11885_100227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1403	Open in IMG/M
3300001593\|JGI12635J15846_10547868	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300003218\|JGI26339J46600_10033032	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1450	Open in IMG/M
3300003223\|JGI26343J46809_1002050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1456	Open in IMG/M
3300003223\|JGI26343J46809_1002319	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300004152\|Ga0062386_100502991	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300005167\|Ga0066672_10632142	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300005177\|Ga0066690_10953342	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300005602\|Ga0070762_10963549	All Organisms → cellular organisms → Bacteria → Terrabacteria group	584	Open in IMG/M
3300005938\|Ga0066795_10249323	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005947\|Ga0066794_10009820	All Organisms → cellular organisms → Bacteria	2683	Open in IMG/M
3300006055\|Ga0097691_1043577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1621	Open in IMG/M
3300006102\|Ga0075015_100611997	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300006864\|Ga0066797_1067884	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300006864\|Ga0066797_1234007	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300006893\|Ga0073928_10291075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1230	Open in IMG/M
3300009520\|Ga0116214_1418179	All Organisms → cellular organisms → Bacteria → Terrabacteria group	525	Open in IMG/M
3300009548\|Ga0116107_1165037	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300009630\|Ga0116114_1162345	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300009636\|Ga0116112_1059493	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1115	Open in IMG/M
3300009683\|Ga0116224_10333405	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300009698\|Ga0116216_10018735	All Organisms → cellular organisms → Bacteria	4345	Open in IMG/M
3300009700\|Ga0116217_10030313	All Organisms → cellular organisms → Bacteria	4128	Open in IMG/M
3300009764\|Ga0116134_1011340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3819	Open in IMG/M
3300009839\|Ga0116223_10270630	Not Available	1020	Open in IMG/M
3300009839\|Ga0116223_10850227	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300010339\|Ga0074046_10352983	All Organisms → cellular organisms → Bacteria → Terrabacteria group	895	Open in IMG/M
3300014158\|Ga0181521_10147015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1360	Open in IMG/M
3300014158\|Ga0181521_10490175	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300015080\|Ga0167639_1037191	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300015197\|Ga0167638_1107986	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300017925\|Ga0187856_1069902	All Organisms → cellular organisms → Bacteria → Acidobacteria	1467	Open in IMG/M
3300017926\|Ga0187807_1175339	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300017931\|Ga0187877_1278905	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300017933\|Ga0187801_10052236	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1488	Open in IMG/M
3300017955\|Ga0187817_10154065	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1461	Open in IMG/M
3300017955\|Ga0187817_10238872	All Organisms → cellular organisms → Bacteria → Acidobacteria	1158	Open in IMG/M
3300017995\|Ga0187816_10037375	All Organisms → cellular organisms → Bacteria → Acidobacteria	1994	Open in IMG/M
3300018006\|Ga0187804_10178672	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300018006\|Ga0187804_10349673	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300018012\|Ga0187810_10266801	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300018013\|Ga0187873_1075311	All Organisms → cellular organisms → Bacteria → Acidobacteria	1380	Open in IMG/M
3300018014\|Ga0187860_1196657	All Organisms → cellular organisms → Bacteria → Terrabacteria group	829	Open in IMG/M
3300018016\|Ga0187880_1116744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1294	Open in IMG/M
3300018022\|Ga0187864_10169320	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1062	Open in IMG/M
3300018022\|Ga0187864_10170526	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1057	Open in IMG/M
3300018057\|Ga0187858_10082767	All Organisms → cellular organisms → Bacteria → Acidobacteria	2216	Open in IMG/M
3300022732\|Ga0224569_111482	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300024271\|Ga0224564_1033291	Not Available	973	Open in IMG/M
3300025453\|Ga0208455_1028159	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1302	Open in IMG/M
3300025460\|Ga0208562_1024756	All Organisms → cellular organisms → Bacteria → Acidobacteria	1415	Open in IMG/M
3300025472\|Ga0208692_1013931	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300025579\|Ga0207927_1072289	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300025579\|Ga0207927_1090306	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300025581\|Ga0208355_1036065	All Organisms → cellular organisms → Bacteria → Acidobacteria	1306	Open in IMG/M
3300025812\|Ga0208457_1072418	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300025854\|Ga0209176_10026121	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300026223\|Ga0209840_1023387	All Organisms → cellular organisms → Bacteria → Acidobacteria	1417	Open in IMG/M
3300026281\|Ga0209863_10070842	Not Available	1030	Open in IMG/M
3300026783\|Ga0207778_106579	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300026800\|Ga0207742_107400	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300026809\|Ga0207820_107740	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300026817\|Ga0207775_102234	All Organisms → cellular organisms → Bacteria → Acidobacteria	1608	Open in IMG/M
3300026817\|Ga0207775_107685	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300026819\|Ga0207765_102175	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300026823\|Ga0207759_102054	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300026830\|Ga0207861_105266	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300026845\|Ga0207760_108004	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300026847\|Ga0207802_1011432	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300026852\|Ga0207838_103730	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300026859\|Ga0207859_1009831	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300026869\|Ga0207821_1012745	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300026872\|Ga0207785_1009135	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300026887\|Ga0207805_1012447	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300026889\|Ga0207745_1008411	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300026898\|Ga0207788_1002885	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300026908\|Ga0207787_1010039	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300026934\|Ga0207816_1019051	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300026947\|Ga0207853_1011589	All Organisms → cellular organisms → Bacteria → Acidobacteria	1443	Open in IMG/M
3300026981\|Ga0207822_1012056	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300026983\|Ga0207856_1011750	All Organisms → cellular organisms → Bacteria → Acidobacteria	1535	Open in IMG/M
3300027014\|Ga0207815_1017342	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300027045\|Ga0207726_1008761	All Organisms → cellular organisms → Bacteria → Acidobacteria	1767	Open in IMG/M
3300027070\|Ga0208365_1008103	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300027313\|Ga0207780_1013304	All Organisms → cellular organisms → Bacteria → Acidobacteria	1663	Open in IMG/M
3300027313\|Ga0207780_1026741	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300027516\|Ga0207761_1035159	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300027625\|Ga0208044_1094581	All Organisms → cellular organisms → Bacteria → Terrabacteria group	878	Open in IMG/M
3300027696\|Ga0208696_1165705	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300027698\|Ga0209446_1084210	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300027703\|Ga0207862_1114799	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300027767\|Ga0209655_10041077	All Organisms → cellular organisms → Bacteria → Acidobacteria	1550	Open in IMG/M
3300027783\|Ga0209448_10042445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1529	Open in IMG/M
3300027783\|Ga0209448_10053825	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300027905\|Ga0209415_10994705	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300027905\|Ga0209415_11019043	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300027910\|Ga0209583_10479157	All Organisms → cellular organisms → Bacteria → Terrabacteria group	610	Open in IMG/M
3300030494\|Ga0310037_10107206	All Organisms → cellular organisms → Bacteria → Acidobacteria	1292	Open in IMG/M
3300030706\|Ga0310039_10321961	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300030707\|Ga0310038_10135320	All Organisms → cellular organisms → Bacteria → Acidobacteria	1243	Open in IMG/M
3300031249\|Ga0265339_10106283	All Organisms → cellular organisms → Bacteria → Acidobacteria	1456	Open in IMG/M
3300031890\|Ga0306925_10392317	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300032160\|Ga0311301_10082361	All Organisms → cellular organisms → Bacteria	6573	Open in IMG/M
3300032160\|Ga0311301_12794318	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300032892\|Ga0335081_10526374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1479	Open in IMG/M
3300032955\|Ga0335076_11098111	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300034090\|Ga0326723_0243214	All Organisms → cellular organisms → Bacteria → Terrabacteria group	801	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.20%
Host-Associated	Host-Associated	1.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.86%
Aquatic	Environmental → Aquatic	33.33%
Plants	Host-Associated → Plants	1.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.96%
Freshwater	Environmental → Aquatic → Freshwater	30.63%
Sediment	Environmental → Aquatic → Sediment	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.80%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.90%
Peat	Environmental → Terrestrial → Peat	0.90%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	32.43%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	30.63%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	23.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.90%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	32.43%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.22%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.21%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.21%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.41%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.80%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	29.73%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	13.51%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.21%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	7.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.21%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	4.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.80%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.80%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.90%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.90%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000658	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 38	Environmental	Open in IMG/M
3300000660	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 16	Environmental	Open in IMG/M
3300000662	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 2	Environmental	Open in IMG/M
3300000685	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13	Environmental	Open in IMG/M
3300000707	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003223	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300006055	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300022732	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1	Host-Associated	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025460	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150 (SPAdes)	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025812	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300026223	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 (SPAdes)	Environmental	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026783	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 36 (SPAdes)	Environmental	Open in IMG/M
3300026800	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 43 (SPAdes)	Environmental	Open in IMG/M
3300026809	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 47 (SPAdes)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026819	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 59 (SPAdes)	Environmental	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026830	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 33 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026852	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 62 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300026872	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 74 (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300026889	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 57 (SPAdes)	Environmental	Open in IMG/M
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental	Open in IMG/M
3300026908	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 77 (SPAdes)	Environmental	Open in IMG/M
3300026934	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 10 (SPAdes)	Environmental	Open in IMG/M
3300026947	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 6 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300026983	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 21 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12336J11891_100351	3300000658	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGG
JGI12415J11908_100431	3300000660	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLSSRARVRFTSRRH
JGI12492J11902_101621	3300000662	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLSSRARVRFT
JGI12297J11905_1001601	3300000685	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLSSRARVRFTSRR
JGI12295J11885_1002271	3300000707	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLSSRARVRFTS
JGI12635J15846_105478682	3300001593	Forest Soil	MSFLRHKEIYPCDEGVILRPRPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYTANHQPR
JGI26339J46600_100330323	3300003218	Bog Forest Soil	MSFLRHKEIYPCDEGAISRPRPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYTANHQPRP
JGI26343J46809_10020501	3300003223	Bog Forest Soil	MSFLRHGDIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSS
JGI26343J46809_10023193	3300003223	Bog Forest Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSS
Ga0062386_1005029911	3300004152	Bog Forest Soil	MSFPRHEEIYPCDKGTISRPCPRPSPWMSFQPAIPGGLLSS
Ga0066672_106321421	3300005167	Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLAIPGRLLSSRARFRFTSRS
Ga0066690_109533421	3300005177	Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLAIPGRLLSSRARFRFTSRSYTANH
Ga0070762_109635491	3300005602	Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSSRA
Ga0066795_102493232	3300005938	Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYTANY
Ga0066794_100098206	3300005947	Soil	MSFLRHGEIYPCDEGAISRPRPRSSPWMSLQLVIPGRLLSSRAR
Ga0097691_10435771	3300006055	Arctic Peat Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQPVIPGRVLSSRARFRFTSRSYTANHQPRPTMLRQ
Ga0075015_1006119972	3300006102	Watersheds	MSFWRHEEIYPCDEGTISRPCPRSSPWMSFQLVIPGRLLSSRARFRFTSRSYT
Ga0066797_10678843	3300006864	Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYTA
Ga0066797_12340071	3300006864	Soil	MSFLRHKEIYPCDEGAILRPRPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYTANH
Ga0073928_102910753	3300006893	Iron-Sulfur Acid Spring	MSFLRHGEIYPCDEGTILRPCPRSSPWMSLQLVIPGRLLSSRARFRFTSHSYTANHQPRPTMLRQR
Ga0116214_14181791	3300009520	Peatlands Soil	MSFLRHGEIYPCDGSGSCDGGAISRPRPRSSPWMSLQLAIPGRLLSSRARFRFTSRSYTAHHQ
Ga0116107_11650371	3300009548	Peatland	MSFLRHGEIYPCDEGAISLSRPRSSPWMSLQLVIPGRLLSSRAR
Ga0116114_11623452	3300009630	Peatland	MSFPRHGEIYPCDEGAISRPRPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYTAN
Ga0116112_10594931	3300009636	Peatland	MSFLRHGEIYPCDGGTISRPCPRSSPWMSFQLVIPGRLLSSRARFRFTSRSYTA
Ga0116224_103334052	3300009683	Peatlands Soil	MSFLRYGEIYPCDEGTISRPCPRSSPWMSLRLVIPGRLLSSRARFRFTSRSYTANHQ
Ga0116216_100187356	3300009698	Peatlands Soil	MSFLRHGEIYPCDEGTILRPCPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYTA
Ga0116217_100303131	3300009700	Peatlands Soil	MSFLRHGEIYPCDGSGSCDGGAISRPRPRSSPWMSLQLAIPGRLLSSRARFRFT
Ga0116134_10113401	3300009764	Peatland	MSILRHGEIYPCDEGAISRPRPRSSPWMCLQLVIPGRL
Ga0116223_102706302	3300009839	Peatlands Soil	MSFLRYGEIYPCDEGAISRPRPRSSPWMSLQLAIPGRLLSSRARFRFTSRSYTA
Ga0116223_108502271	3300009839	Peatlands Soil	MSFLRHGEIYPCDGSGSCDGGAISRPRPRSSPWMSLQLAIPGRLLSSRARFRFTSRSYTA
Ga0074046_103529832	3300010339	Bog Forest Soil	MSFLRHGEIYPCDEGTVSRPRPRSSPWMSLQLVIPGRLLSSRARLRFTSRS
Ga0181521_101470153	3300014158	Bog	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPG
Ga0181521_104901751	3300014158	Bog	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLCSRAR
Ga0167639_10371912	3300015080	Glacier Forefield Soil	MSFLRHKEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLCSRARFRFTS
Ga0167638_11079861	3300015197	Glacier Forefield Soil	MSFLRHGEIYPCDEGAISRPRPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYTANHQPRPTM
Ga0187856_10699021	3300017925	Peatland	MSFPRHGEIYPCDEGAISRPRPRSSPWMSLQLAIPGRLLSSRARFRFASRSYTANHQSRCTMLLQRTA
Ga0187807_11753392	3300017926	Freshwater Sediment	MSFLRHGEIYPCDEGAISRPRPRSSPWMSLQLAIPGGLLSSRARVRFPSRSHARKPQPR
Ga0187877_12789051	3300017931	Peatland	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIP
Ga0187801_100522364	3300017933	Freshwater Sediment	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGR
Ga0187817_101540651	3300017955	Freshwater Sediment	MSFLRHGEIYPCDEGAISRPRPRSSPWMSLQLAIPGGLLSSRARVRFPSRSHARKPQPRRTMLWQRT
Ga0187817_102388723	3300017955	Freshwater Sediment	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRVLSSRARFRFTSRSYTA
Ga0187816_100373754	3300017995	Freshwater Sediment	MSFLRHREIYPCDEGTILRSRPRSSPWMSLQLGIPGGLLSSSARVRFPSRSHAGKLQPRR
Ga0187804_101786722	3300018006	Freshwater Sediment	MSFLRHGEIYPCDEGASLRSRPRSSPWMSLQLGIPGGLLSS
Ga0187804_103496731	3300018006	Freshwater Sediment	MSFLRHKEIYPCDEGAISRPRPRSSPWMSLQLVIPGRLLSSRARFRFTSRSY
Ga0187810_102668012	3300018012	Freshwater Sediment	MSFLRHKEIYPCDEGTISRPRPRSSPWMSLQLVIP
Ga0187873_10753113	3300018013	Peatland	MSFLRHGEIYPCDEGAISRPRPRSSPWMSLQLVIPGRLLS
Ga0187860_11966572	3300018014	Peatland	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLCSRARFRFTSRSYTANHQPRP
Ga0187880_11167441	3300018016	Peatland	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLL
Ga0187864_101693202	3300018022	Peatland	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLC
Ga0187864_101705262	3300018022	Peatland	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRL
Ga0187858_100827671	3300018057	Peatland	MSFLRHGEIYPCDGAGSCDGGAISRPRPRSSPWMSLQLAIP
Ga0224569_1114821	3300022732	Rhizosphere	MSFLRHGEIYPCDGGAISRPRPRSSPWMSLQLVIPGRLLSSRARFR
Ga0224564_10332911	3300024271	Soil	MSFLRHGEIYPCDGGAISRPRPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYTANHQPRPTMLRQ
Ga0208455_10281591	3300025453	Peatland	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLYSRA
Ga0208562_10247563	3300025460	Peatland	MSFPRHGEIYPCDEGAISRPRPRSSPWMSLQLVIPGRLLSSRARFR
Ga0208692_10139311	3300025472	Peatland	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSSRARFRFPSRSYTAN
Ga0207927_10722892	3300025579	Arctic Peat Soil	MSFLRHKEICPCDEGAILRPRPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYT
Ga0207927_10903062	3300025579	Arctic Peat Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYT
Ga0208355_10360651	3300025581	Arctic Peat Soil	MSFLRHGEIYPCDEGAISRPRPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYT
Ga0208457_10724181	3300025812	Peatland	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSSRARFRFP
Ga0209176_100261213	3300025854	Arctic Peat Soil	MSFLRHGEINPCDEGAISRPRPRSSPWMSLQLVIPGRLLSSRARVRFTSRS
Ga0209840_10233871	3300026223	Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSSRARFRFT
Ga0209863_100708422	3300026281	Prmafrost Soil	MSFLRHGEIYPCDEGTILRPRPCSSPWMSLQPVIPGRLLSS
Ga0207778_1065792	3300026783	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSRARVRFTSRRHSAA
Ga0207742_1074001	3300026800	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGL
Ga0207820_1077401	3300026809	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIP
Ga0207775_1022344	3300026817	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGL
Ga0207775_1076852	3300026817	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSRA
Ga0207765_1021751	3300026819	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLS
Ga0207759_1020541	3300026823	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLSSRA
Ga0207861_1052662	3300026830	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSRARV
Ga0207760_1080041	3300026845	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGG
Ga0207802_10114322	3300026847	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLL
Ga0207838_1037301	3300026852	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSR
Ga0207859_10098311	3300026859	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSRARVRFT
Ga0207821_10127452	3300026869	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSRARVRFTSRR
Ga0207785_10091351	3300026872	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSRARVRFTSRRHSAAA
Ga0207805_10124472	3300026887	Tropical Forest Soil	MSFLRHGEIYPWDEGTISQPCPRPSQWMSFQPAIPGGVLSSRARVRFTSRRHSAAAPA
Ga0207745_10084111	3300026889	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSRARVRFTSRRHSA
Ga0207788_10028854	3300026898	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLSSRARVR
Ga0207787_10100392	3300026908	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSRARVRFTSRRH
Ga0207816_10190512	3300026934	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPG
Ga0207853_10115893	3300026947	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLSSRARVRFTSRRHSAAA
Ga0207822_10120562	3300026981	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSRARVRFTSRRHS
Ga0207856_10117501	3300026983	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLSSR
Ga0207815_10173422	3300027014	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLC
Ga0207726_10087614	3300027045	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLSSRARVRFTSRRHS
Ga0208365_10081031	3300027070	Forest Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLS
Ga0207780_10133044	3300027313	Tropical Forest Soil	MSFLRHGEIYPWHEGTISRPCPRPSQWMSFQPVIPGGLLSSRARV
Ga0207780_10267412	3300027313	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLSSRARV
Ga0207761_10351592	3300027516	Tropical Forest Soil	MSFLRHGEIYPWDEGTISRPCPRPSQWMSFQPVIPGGLLCSRARVRFTS
Ga0208044_10945811	3300027625	Peatlands Soil	MSFLRHAEIYPCDEGGSCDGGAISRPRPRSSPWMSLRLAIPGR
Ga0208696_11657052	3300027696	Peatlands Soil	MSFLRYGEIYPCDEGTISRPCPRSSPWMSLRLVIPGRLLSSRARFRFTS
Ga0209446_10842101	3300027698	Bog Forest Soil	MSFLRHGEIYPCDEGAISRPRPRSSLWMSLQLVIPGRLLSSRACFCFTSR
Ga0207862_11147991	3300027703	Tropical Forest Soil	MSFLRHEEIYPCDEGTISRPCPRSSQWMSFQPAIPGGLLSSRARV
Ga0209655_100410773	3300027767	Bog Forest Soil	MSFLRHGEIYPCDEGAISRPRPRSSPWMSLQLAIPGRLLSSRARFRFTSRSYTAHH
Ga0209448_100424451	3300027783	Bog Forest Soil	MSFLRHGEIYPCDEGAISRPRPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYTANHQPRPTML
Ga0209448_100538251	3300027783	Bog Forest Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLCSRARFRFTSRS
Ga0209415_109947051	3300027905	Peatlands Soil	MSFLRYGEIYPCDEGAISRPRPRSSPWMSLQLAIPGRLL
Ga0209415_110190431	3300027905	Peatlands Soil	MSFLRHGEIYPCDEGTISRPCPHSSPWMSLQLVIPGRLLFSRARFRFTSRSYTANYQPRP
Ga0209583_104791572	3300027910	Watersheds	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLSSRARFRFTSRSYAG
Ga0310037_101072061	3300030494	Peatlands Soil	MSFLRHGEIYPCDEGAISRPRPRSSPWMSLPLAIPGRLLSSRARFRFTSRSYTAHHQPR
Ga0310039_103219612	3300030706	Peatlands Soil	MSFLRHAEIYPCDEGGSCDGGAISRPRPRSSPWMSLRLAIPGRLLSSRARFRFASWSYTANHQPRS
Ga0310038_101353203	3300030707	Peatlands Soil	MSFLRHAEIYPCDEGGSCDGGAISRPRPRSSPWMSLRLAIPGRLLSSRA
Ga0265339_101062833	3300031249	Rhizosphere	MSFLRHKEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLCSRARFRFTSRSYTANYQSRPTML
Ga0306925_103923174	3300031890	Soil	MSFLRHGEIYPWDEGTISQPCPRPSQWMSFQPVIPGGLL
Ga0311301_1008236110	3300032160	Peatlands Soil	MSFLRYGEIYPCDEGAISRPRPRSSPWMSLQLAIPGRLLSSRARFRFTSRSYTAHH
Ga0311301_127943181	3300032160	Peatlands Soil	MSFLRHGEIYPCDGSGSCDGGAISRPRPRSSPWMSLQLAIPGRLLSSRARFRFTSRSYTAHH
Ga0335081_105263743	3300032892	Soil	MSFLRHGEIYPCDEGASLRPRPRSSPWMSLRLGIP
Ga0335076_110981111	3300032955	Soil	MSFLRHGEIYPCDEGASWRPRPRSSPWMSLRLGIPGGLLSSRARVRFPSRSHAGK
Ga0326723_0243214_613_801	3300034090	Peat Soil	MSFLRHGEIYPCDEGTISRPCPRSSPWMSLQLVIPGRLLCSRARFRFTSRSYTAYHQPSPTML

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085267

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences