NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F084687

Metagenome / Metatranscriptome Family F084687

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084687
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 53 residues
Representative Sequence MKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKA
Number of Associated Samples 107
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.607 % of family members)
Environment Ontology (ENVO) Unclassified
(31.250 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.857 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.75%    β-sheet: 23.75%    Coil/Unstructured: 62.50%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF01522Polysacc_deac_1 60.71
PF01425Amidase 2.68
PF01220DHquinase_II 0.89
PF13379NMT1_2 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 60.71
COG0154Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidaseTranslation, ribosomal structure and biogenesis [J] 2.68
COG07573-dehydroquinate dehydrataseAmino acid transport and metabolism [E] 0.89


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Phylogeny

NCBI Taxonomy

NameRankTaxonomyDistribution
UnclassifiedrootN/A100.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil7.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.25%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.25%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.46%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.57%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.57%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.68%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.68%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.68%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.79%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.79%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.79%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.89%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.89%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004024Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004058Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005277Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006048Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3Host-AssociatedOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006572Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012487Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510Host-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300014321Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300020150Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MGEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022737Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S094-311B-5EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300023067Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S221-509R-5EnvironmentalOpen in IMG/M
3300023168Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5EnvironmentalOpen in IMG/M
3300025290Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5Host-AssociatedOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026730Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-10 (SPAdes)EnvironmentalOpen in IMG/M
3300026773Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026857Soil and rhizosphere microbial communities from Laval, Canada - mgLMB (SPAdes)EnvironmentalOpen in IMG/M
3300026929Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A3w-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027036Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G07A5-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027390Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A1-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027405Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A1-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027438Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A3a-11 (SPAdes)EnvironmentalOpen in IMG/M
3300027455Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G06K3-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027992Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5EnvironmentalOpen in IMG/M
3300027993Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S199-509C-5EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0055436_1009993013300004024Natural And Restored WetlandsMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLDDIEAIAAIPAKALAKVGKGAVLGPPLRGI
Ga0055498_1008143123300004058Natural And Restored WetlandsMKLVRYRSATGEKPGLILDGEVFDLSGSVAALHPRAPTFADIAAIAAVPA
Ga0066395_1049945113300004633Tropical Forest SoilMKLVRYRSATGEKPGLILDGEVFDLSGSFSALQPRPPSLADIEAIAAVPTRVLTKAPKDAVLGPPLR
Ga0065716_100556513300005277Arabidopsis RhizosphereMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALTKIARGAVL
Ga0065705_1087293013300005294Switchgrass RhizosphereMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKAL
Ga0070690_10014021213300005330Switchgrass RhizosphereMKLVRYRSASGERPGLFLDGEIFDLSGSFEALNPRAPTLDDIEAIAAVPAKALV
Ga0070690_10111730123300005330Switchgrass RhizosphereMKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIK
Ga0066388_10010771133300005332Tropical Forest SoilMKLVRYRSATGEEPGLILDGEVFDLSGSFSSLNPRAPTLDDIEAIAAVPAKALSKAPKDVELASA*
Ga0066388_10070734613300005332Tropical Forest SoilMKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIEAIAA
Ga0066388_10216070123300005332Tropical Forest SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVPAKALTKVEKGVALGPPLRGI
Ga0068869_10067446523300005334Miscanthus RhizosphereMKLVRYRSASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDI
Ga0070666_1040044613300005335Switchgrass RhizosphereMKLVRYHSSTGEKPGLILDGEVFDLSGSFAALTPRAPTFADIAAISAVPAKVLTKAPKESVLGPPLRGIG
Ga0070667_10006992143300005367Switchgrass RhizosphereMKLVRYRSASGEKPGLFLDGEIFDLSGSFEALNPRAPTLDD
Ga0070711_10041841923300005439Corn, Switchgrass And Miscanthus RhizosphereMKLVRYRSATGEKPGLFLDGEIFDLSAGFAALSHRAPTLEHVAAIAAVPVKTLAPMGKGLPL
Ga0070700_10022893033300005441Corn, Switchgrass And Miscanthus RhizosphereMKLVRYRSSTGEKPGLILDGEVFDLSGSFAALTPRAPTFADIAAIS
Ga0070665_10061803713300005548Switchgrass RhizosphereMKLVRYCSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFADIAAI
Ga0070702_10078073323300005615Corn, Switchgrass And Miscanthus RhizosphereMKLVRYRSASGERPGLFLDGEIFDLSGSFEALNPRAPTLDDI
Ga0068852_10006033113300005616Corn RhizosphereMKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAITAVPAKALVKVEKGAVLGP
Ga0066905_10048882223300005713Tropical Forest SoilMKLVRYRSATGERPGLILDGEVFDLSGSFAALNPRAPTLDDIDAIAAVP
Ga0068866_1010689013300005718Miscanthus RhizosphereMKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIKAVAAIP
Ga0066903_10114289713300005764Tropical Forest SoilMKLVRYRSATGEKPGLMLDGEVFDLSAGFAALNHR
Ga0066903_10603709313300005764Tropical Forest SoilMKLVRYRSATGEEPGLILDGEVFDLSGSFSSLNPRAPTLDDIEAIAAVPA
Ga0075023_10051139813300006041WatershedsMKLVRYRSATGEKPGLILDGEVFDLSAGFAALSHRAPTLDHIAAIAAVPAKALPKVGKGVAFGPPLRGIG
Ga0075368_1042086423300006042Populus EndosphereMKLVRYRSASGEKPGLFLDGEIFDLSGSFEALNPRAPTLDDIAAIAAV
Ga0075363_10085017823300006048Populus EndosphereMKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIKAVA
Ga0075018_1007955533300006172WatershedsMKLVRYRSSTGEKPGLILDGEVFDLSGSFAALNPRAPTFADIAAISAVPAKVLTK
Ga0074051_1173499023300006572SoilMKLVRYRSATGEKPGLILDGEVFDLSAGFAALNHRAPALDHIAAIAAVPAKTFSKVEKGAVLGPPLRGIGKI
Ga0074053_1000053013300006575SoilMKLVRYRSATDEKPGLILDGEIFDLSGGFAALSHRAPTLDHIAAIAAV
Ga0074049_1275939923300006580SoilMKLVRYRSATGEKPGLILDGEVFDLSAGFAALNHRAPALDHIAAIAAVPAKTFSKVEKGAVLGPPLRGIGKIIG
Ga0074048_1001224623300006581SoilMKLVRYRTASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVPAKALPEVEKGTALGPPLR
Ga0074062_1268263113300006606SoilMKLVRYRSATGEKPGLFLDGEIFDLSGSFAALNPRAPTLNDIEAIATVPAKALTKVARGAVLGPP
Ga0079221_1157053413300006804Agricultural SoilMKLVRYRSATGEKPGLFLDGEIFDLSAGFAALSHHAPTLEHVAAIAAVQVKTLAPMGKGLPLGPPLRGIGKIIGVG
Ga0075425_10194845523300006854Populus RhizosphereMKLVRYRSASGEKPGLFLDGEIFDLSGSFEALNPRAPTLDDIEAIAAVPAKALVKV
Ga0105251_1031881423300009011Switchgrass RhizosphereMKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDI
Ga0105240_1170310223300009093Corn RhizosphereMKLVRYCSSTGEKPGLILCGEAVGLSCTFASLTPRAPTFAGIAAMSALPA
Ga0111538_1131927623300009156Populus RhizosphereMKLVRYRSATGEEPGLILDGVIFDLSGSFSSLNPRAPRLDDIEAIA
Ga0126380_1017585833300010043Tropical Forest SoilMKLVRYRSATGEEPGLILDGEVFDLSRSFSALNPRAPTFDDIKAIAAIPAKALSKALKDVVLGPPLRGIG
Ga0126379_1111454723300010366Tropical Forest SoilMKLVRYRSATGEKPGLVLDGEVFDLSGSFSPLHPRPPTFADIEAIAAMPTKSLTKIPRDTVLG
Ga0134125_1128895823300010371Terrestrial SoilMKLVRYRSATGEKPGLFLDGDVFDLAGSFSALSPRAPTFDDIAAIAAVPLKALTKIEKGVAFGPPLRGI
Ga0105239_1049087413300010375Corn RhizosphereMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALIKVAKGAVL
Ga0126381_10514928023300010376Tropical Forest SoilMKLVRYRSAGGEKPGLILDGEIFDLSGSFSALQPRAPTIADVEAIAGVPVK
Ga0134122_1011658943300010400Terrestrial SoilMKLVRYRSATGEEPGLILDGEVFVLSGSFSSLNPRAPTLADIEAIAAIPTKALSK
Ga0105246_1016201233300011119Miscanthus RhizosphereMKLVRYCSSTGEKPGLILDGEVFDLSGSFAALSPR
Ga0157321_100134833300012487Arabidopsis RhizosphereMKLVRYRSATGEEPGLILDGAIFALSGSFSSLNPPAPTLDDIEAIAAIPAK
Ga0164300_1094605813300012951SoilMKLVRYRSATGEKPGLIFDGEVFDLSSGFAALGHRAPTH
Ga0164298_1092615013300012955SoilMKLVRYRSATGEKPGLFLDGEIFDLSAGFAALSHRAPT
Ga0164299_1107740023300012958SoilMKLVRYRSATGEEPGLILDGEVFDLSGSFSALNPRAPTFDDVKAIAAIPAKALSKVP
Ga0164309_1004913633300012984SoilMKLVRYRSASSEKPGLILDGAIFDLSGSFPALSPRAPT
Ga0164304_1029263323300012986SoilMKLVRYRSATGEEPGLILDGEVFDLSGSFSALNPRAPTFDDVKAIAAIPAK
Ga0157369_1162446913300013105Corn RhizosphereMKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIKAVAAIPAKAL
Ga0075353_122276523300014321Natural And Restored WetlandsMKLVRYRSATGEKPGLILDGEVFDLSGSVAALHPRAPTFADIAAIAAVPANALSKVPKGAVLG
Ga0132256_10217992123300015372Arabidopsis RhizosphereMKLVRYRSASGEKPGLILDGEIFDLSGSFDTLNPRA
Ga0132255_10467908523300015374Arabidopsis RhizosphereMKLVRYRSATGEKPGLALDGEIFDLSGSFSALQPRAPTFADIEAIAAVPAKVLTKVPKDA
Ga0182041_1175801123300016294SoilMKLVCYRSATGEKPGLILDSEIFDLSGSFSAIHPRPPTFADIEAIAAVPSKALMKAPKDAVLGPPLRGIGEII
Ga0187786_1039388213300017944Tropical PeatlandMKLVRYRSATGEKPGLVLDGEIFDLSAGFAGLNHRAPTLEHVAAIAAVPVKT
Ga0187766_1081061013300018058Tropical PeatlandMKLVRYRSATGEKPGLVLDGEVFDLSGSITALTPRAPTFDDVEAIAA
Ga0187773_1045187523300018064Tropical PeatlandMKLVRYRSATGEKLGLILDGEVFDLSGSVAALHSRAPTFADIAAIAAMPANALSKV
Ga0193723_108315623300019879SoilMKLVRYRSATGEEPGLILDDEVFDLSGSFSALNPRAPTLDDIEAIAAIPV
Ga0187768_111585023300020150Tropical PeatlandMKLVRYRSATGEKPGLVLDGEVFDLSGSITALTPRAPTFDDVEAIAAVPAKALSKVPKGVVLGPPLRGVGKIIGV
Ga0182009_1068005123300021445SoilMKLVRYRSTTGEKPGLLLDGEIYDLSAGFAALSHRAPTFEH
Ga0126371_1006871553300021560Tropical Forest SoilMKLVRYRSAIGEEPGLILDGEVFNLSGSFSSLNPRAPTLDDIEAIAAVPAKALSKAPKDVALGP
Ga0247747_101753123300022737SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLN
Ga0247786_103155113300022883SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAV
Ga0247743_106706223300023067SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALTKI
Ga0247748_102410423300023168SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALIKVAKGAVLGPPLRGIGK
Ga0207673_102711513300025290Corn, Switchgrass And Miscanthus RhizosphereMKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDI
Ga0207656_1045847213300025321Corn RhizosphereMKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIKAVAAIPAKALSKAPRDAVLGPPLR
Ga0207682_1000085913300025893Miscanthus RhizosphereMKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIE
Ga0207642_1024471413300025899Miscanthus RhizosphereMKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAPTLDDIKAVAAIPAK
Ga0207685_1037313423300025905Corn, Switchgrass And Miscanthus RhizosphereMKLVRYRSATGEEPGLILDGEIFDLSGSFSSLNPRAP
Ga0207699_1051466323300025906Corn, Switchgrass And Miscanthus RhizosphereMKLVRYRSTTGEKPGLLLDGEIYDLSAGFAALSHRAPTFEHVE
Ga0207684_1171020423300025910Corn, Switchgrass And Miscanthus RhizosphereMKLVRYRSASSEKPGLILDGEVFDLSGSFAALSPRAPTFADIAAISAVPAKALTKAPKESALGPP
Ga0207695_1132314013300025913Corn RhizosphereMKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVPAKALVKVEKSAVL
Ga0207652_1122942323300025921Corn RhizosphereMKLVRYRSSTGEKPGLILDGEVFDLSGSFAALTPRAPTFADIAAISAV
Ga0207659_1036584213300025926Miscanthus RhizosphereMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALIKVAKGAVLGPPLR
Ga0207644_1013949233300025931Switchgrass RhizosphereMKLVRYCSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFAD
Ga0207644_1066297913300025931Switchgrass RhizosphereMKLVRYRSASGEKPGLFLDGEIFDLSGSFEALNPRAPTLDDIEAIAAVPAKALVKVEKGV
Ga0207706_1021020933300025933Corn RhizosphereMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAA
Ga0207669_1100653923300025937Miscanthus RhizosphereMKLVRYCSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFADIAAISAVPAKALTKAPKESALGPPLRGI
Ga0207691_1012741843300025940Miscanthus RhizosphereMKLVRYCSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFADIAAISAVPAK
Ga0207679_1215388913300025945Corn RhizosphereMKLVRYRSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFADIAA
Ga0207640_1121922523300025981Corn RhizosphereMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIA
Ga0207708_1021658913300026075Corn, Switchgrass And Miscanthus RhizosphereMKLVRYRSSTGEKPGLILDGEVFDLSGSFAALTPRAPTFADIAAISAVP
Ga0207641_1152827313300026088Switchgrass RhizosphereMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDI
Ga0207491_10008723300026730SoilMKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIA
Ga0207566_10528923300026773SoilMKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLD
Ga0208893_100512223300026857SoilMKLVRYRSATGEKPGLILDGEVFDLSAGFAALNHRAP
Ga0207461_100363023300026929SoilMKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVPAKALVKVEKSAVLGPPLRGI
Ga0207467_100037913300027036SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKA
Ga0207435_10320713300027390SoilMKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVP
Ga0207464_10010623300027405SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLDDIEAIAAVPAKALVKVEKGVVL
Ga0207564_10501423300027438SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAITAVPAKALVKVEK
Ga0207504_10249923300027455SoilMKLVRYRSASSEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIAAVPAKALVKV
Ga0209068_1092244313300027894WatershedsMKLVRYRSSTGEKPGLILDGEVFDLSGSFAAPSPRAPTFADIAAISAVPA
Ga0247750_101071523300027992SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTL
Ga0247749_100446013300027993SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFEALNPRAPTLNDIAAIAAVPAKALIKVAKGAVLG
Ga0307311_1010170423300028716SoilMKLVRYRSTTGETPGLMLDGEVFDLSGSFTALNRRAPTLEDVSAIAAVLMKSLSKVKAGTPL
Ga0307296_1005369613300028819SoilMKLVRYRSATGEEPGLILDDEVFDLSGSFSALNPREPTLDDI
Ga0307289_1046283323300028875SoilMKLVRYRSATGEEPGLILDDEVFDLSGSFSALNPRAPTLDDI
Ga0307304_1006832033300028885SoilMKLVRYRSTTGETPGLMLDGEVFDLSGSFTALNRRAPTLEDVSAIAAVLMKSLS
Ga0075386_1210797913300030916SoilMKLVRYRSSTGEKPGLILDGEVFDLSGSFAALSPRAPTFADIAAISAVPAK
Ga0307495_1007906013300031199SoilMKLVRYRSSTGEKPGLILDGEVFDLSGSFAALTPRPPIFADIAAI
Ga0307497_1074590723300031226SoilMKLVRYRSATGEKPGLILDGEVFDLSAGFAGLNHRAPALDHIAAIAAVPAKTFSKVE
Ga0310886_1019394613300031562SoilMKLVRYRSATGEEPGLILDGVIFDLSGSFSSLNPRAPRLDDIEAIAAIPAKALSK
Ga0318515_1002773713300031572SoilMKLVRYRSATGEEPGLILDGEVFDLSGSFSSLNPRAPTLDDIEAIAAVP
Ga0310904_1101335023300031854SoilMKLVRYRTASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAIA
Ga0318544_1027254523300031880SoilMKLVRYRSATGEEPGLILDGEVFDLSGSFSSLNPRAPTLDDIEAIAAVPAKALSKAPK
Ga0310909_1094263623300031947SoilMKLVRYRSATGEKPGLILDSEIFDLSGSFSAIYPRPPTFADIEAIAAVPSKALMKAPK
Ga0318533_1076605613300032059SoilMKLVRYRSATGEKPGLILDSEIFDLSGSFSAIHPRPPTFADIEAIA
Ga0310889_1011073013300032179SoilMKLVRYRSATGEEPGLILDGEVFDLSGSFSALNPRAPTFDDVKAIAAIP
Ga0310810_1022118533300033412SoilMKLVRYRSASGEKPGLFLDGEIFDLSGSFEALNPRAPTLDDIEAIAAVPAKALVK
Ga0247829_1153918713300033550SoilMKLVRYRSASGEKPGLILDGEIFDLSGSFAALNPRAPTLDDIEAITAV


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