Metagenome / Metatranscriptome Family F081391

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F081391
Family Type	Metagenome / Metatranscriptome
Number of Sequences	114
Average Sequence Length	79 residues
Representative Sequence	MKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKP
Number of Associated Samples	57
Number of Associated Scaffolds	114

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.91 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	91.23 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (78.070 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat (68.421 % of family members)
Environment Ontology (ENVO)	Unclassified (98.246 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (68.421 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.54% β-sheet: 2.70% Coil/Unstructured: 56.76%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 114 Family Scaffolds
PF12705	PDDEXK_1	22.81
PF01612	DNA_pol_A_exo1	2.63
PF02399	Herpes_ori_bp	0.88
PF00476	DNA_pol_A	0.88

COG ID	Name	Functional Category	% Frequency in 114 Family Scaffolds
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
All Organisms	root	All Organisms	21.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Viruses	superkingdom	All Organisms → Viruses	19.30 %
cellular organisms	root	All Organisms → cellular organisms	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.30 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	78.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	19.30 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002493\|JGI24185J35167_1045370	Not Available	930	Open in IMG/M
3300003688\|Ga0061020_1056073	Not Available	924	Open in IMG/M
3300003688\|Ga0061020_1110728	Not Available	539	Open in IMG/M
3300005247\|Ga0068637_1017051	Not Available	610	Open in IMG/M
3300005251\|Ga0068634_1010601	Not Available	649	Open in IMG/M
3300005452\|Ga0068706_1085619	Not Available	551	Open in IMG/M
3300005452\|Ga0068706_1086994	Not Available	546	Open in IMG/M
3300005453\|Ga0068705_10093748	Not Available	818	Open in IMG/M
3300005483\|Ga0068681_165846	Not Available	731	Open in IMG/M
3300005484\|Ga0068673_158622	Not Available	734	Open in IMG/M
3300005489\|Ga0068677_100728	Not Available	3125	Open in IMG/M
3300005496\|Ga0068679_1009552	Not Available	578	Open in IMG/M
3300006363\|Ga0068659_1007871	Not Available	669	Open in IMG/M
3300010180\|Ga0124937_1035776	Not Available	665	Open in IMG/M
3300010184\|Ga0124920_1090966	All Organisms → Viruses → Predicted Viral	1133	Open in IMG/M
3300010186\|Ga0124916_1082284	Not Available	652	Open in IMG/M
3300010187\|Ga0124918_1002929	Not Available	648	Open in IMG/M
3300010190\|Ga0124925_1034322	Not Available	680	Open in IMG/M
3300010193\|Ga0124924_1262444	Not Available	571	Open in IMG/M
3300010194\|Ga0124921_1133559	Not Available	881	Open in IMG/M
3300010194\|Ga0124921_1207037	All Organisms → Viruses → Predicted Viral	1052	Open in IMG/M
3300010195\|Ga0124911_1131794	Not Available	734	Open in IMG/M
3300010247\|Ga0124945_1022611	Not Available	656	Open in IMG/M
3300010254\|Ga0124938_1049676	Not Available	657	Open in IMG/M
3300010255\|Ga0124910_1001744	Not Available	756	Open in IMG/M
3300011323\|Ga0138355_1162815	Not Available	535	Open in IMG/M
3300026237\|Ga0209750_1004741	All Organisms → Viruses → Predicted Viral	3916	Open in IMG/M
3300026237\|Ga0209750_1042667	Not Available	856	Open in IMG/M
3300026278\|Ga0209018_1110429	Not Available	514	Open in IMG/M
3300026293\|Ga0209227_1043929	Not Available	1598	Open in IMG/M
3300026509\|Ga0209809_1075440	Not Available	927	Open in IMG/M
3300026509\|Ga0209809_1116162	Not Available	652	Open in IMG/M
3300026509\|Ga0209809_1135335	Not Available	572	Open in IMG/M
3300026509\|Ga0209809_1145759	Not Available	536	Open in IMG/M
3300027279\|Ga0209691_1079440	Not Available	559	Open in IMG/M
3300027279\|Ga0209691_1085785	Not Available	524	Open in IMG/M
3300031245\|Ga0308395_1070393	Not Available	854	Open in IMG/M
3300031245\|Ga0308395_1148215	Not Available	504	Open in IMG/M
3300031508\|Ga0308394_1052432	Not Available	948	Open in IMG/M
3300031508\|Ga0308394_1054637	Not Available	919	Open in IMG/M
3300031508\|Ga0308394_1056499	Not Available	897	Open in IMG/M
3300031508\|Ga0308394_1056795	Not Available	893	Open in IMG/M
3300031508\|Ga0308394_1100651	Not Available	587	Open in IMG/M
3300031512\|Ga0308397_1045079	Not Available	1102	Open in IMG/M
3300031512\|Ga0308397_1080568	Not Available	726	Open in IMG/M
3300031513\|Ga0308412_1000218	All Organisms → cellular organisms → Bacteria	27933	Open in IMG/M
3300031513\|Ga0308412_1002673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	9570	Open in IMG/M
3300031513\|Ga0308412_1062577	All Organisms → Viruses → Predicted Viral	1228	Open in IMG/M
3300031513\|Ga0308412_1065282	All Organisms → Viruses → Predicted Viral	1190	Open in IMG/M
3300031513\|Ga0308412_1077361	All Organisms → Viruses → Predicted Viral	1049	Open in IMG/M
3300031513\|Ga0308412_1096813	Not Available	892	Open in IMG/M
3300031513\|Ga0308412_1179962	Not Available	580	Open in IMG/M
3300031515\|Ga0308396_1044598	All Organisms → Viruses → Predicted Viral	1016	Open in IMG/M
3300031515\|Ga0308396_1074493	Not Available	712	Open in IMG/M
3300031516\|Ga0308398_1090853	Not Available	677	Open in IMG/M
3300031568\|Ga0308393_1048148	All Organisms → Viruses → Predicted Viral	1002	Open in IMG/M
3300031568\|Ga0308393_1075768	Not Available	741	Open in IMG/M
3300031767\|Ga0308401_1000086	All Organisms → cellular organisms → Bacteria	28161	Open in IMG/M
3300031767\|Ga0308401_1029364	All Organisms → Viruses → Predicted Viral	1183	Open in IMG/M
3300031767\|Ga0308401_1038064	All Organisms → Viruses → Predicted Viral	1007	Open in IMG/M
3300031767\|Ga0308401_1038381	All Organisms → Viruses → Predicted Viral	1002	Open in IMG/M
3300031767\|Ga0308401_1057470	Not Available	779	Open in IMG/M
3300031783\|Ga0308418_1034899	Not Available	1333	Open in IMG/M
3300031783\|Ga0308418_1035704	All Organisms → Viruses → Predicted Viral	1310	Open in IMG/M
3300031783\|Ga0308418_1038679	All Organisms → Viruses → Predicted Viral	1233	Open in IMG/M
3300031783\|Ga0308418_1071003	Not Available	802	Open in IMG/M
3300031812\|Ga0308411_10043900	All Organisms → Viruses → Predicted Viral	2107	Open in IMG/M
3300031812\|Ga0308411_10094773	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300031812\|Ga0308411_10109992	Not Available	1038	Open in IMG/M
3300031812\|Ga0308411_10229196	Not Available	616	Open in IMG/M
3300031812\|Ga0308411_10281452	Not Available	538	Open in IMG/M
3300031812\|Ga0308411_10283979	Not Available	535	Open in IMG/M
3300031830\|Ga0308409_1033091	All Organisms → Viruses → Predicted Viral	1381	Open in IMG/M
3300031830\|Ga0308409_1049957	All Organisms → Viruses → Predicted Viral	1040	Open in IMG/M
3300031830\|Ga0308409_1068551	Not Available	839	Open in IMG/M
3300031865\|Ga0308408_1017236	All Organisms → Viruses → Predicted Viral	2076	Open in IMG/M
3300031865\|Ga0308408_1054383	Not Available	968	Open in IMG/M
3300031875\|Ga0308405_1049334	Not Available	1165	Open in IMG/M
3300031875\|Ga0308405_1114418	Not Available	643	Open in IMG/M
3300031878\|Ga0308404_1021154	Not Available	1437	Open in IMG/M
3300031948\|Ga0308406_1035257	All Organisms → Viruses → Predicted Viral	1196	Open in IMG/M
3300031948\|Ga0308406_1096563	Not Available	604	Open in IMG/M
3300031950\|Ga0308417_1054453	Not Available	1630	Open in IMG/M
3300031950\|Ga0308417_1086763	All Organisms → Viruses → Predicted Viral	1148	Open in IMG/M
3300031950\|Ga0308417_1186472	Not Available	656	Open in IMG/M
3300031958\|Ga0308410_1184579	Not Available	531	Open in IMG/M
3300031958\|Ga0308410_1195316	Not Available	511	Open in IMG/M
3300031966\|Ga0308420_1233855	Not Available	513	Open in IMG/M
3300031980\|Ga0308403_1003609	Not Available	4255	Open in IMG/M
3300031980\|Ga0308403_1038220	Not Available	1036	Open in IMG/M
3300031980\|Ga0308403_1058763	Not Available	784	Open in IMG/M
3300032033\|Ga0308402_1028430	Not Available	1185	Open in IMG/M
3300032034\|Ga0308407_1042485	Not Available	1064	Open in IMG/M
3300032034\|Ga0308407_1052481	Not Available	920	Open in IMG/M
3300032034\|Ga0308407_1058292	Not Available	856	Open in IMG/M
3300032034\|Ga0308407_1097746	Not Available	601	Open in IMG/M
3300032045\|Ga0308400_1002595	Not Available	5419	Open in IMG/M
3300032045\|Ga0308400_1030343	Not Available	1291	Open in IMG/M
3300032045\|Ga0308400_1127764	Not Available	503	Open in IMG/M
3300032049\|Ga0308416_1021274	Not Available	1568	Open in IMG/M
3300032049\|Ga0308416_1045692	Not Available	915	Open in IMG/M
3300032057\|Ga0308421_1053068	All Organisms → Viruses → Predicted Viral	1121	Open in IMG/M
3300032057\|Ga0308421_1068680	Not Available	929	Open in IMG/M
3300032057\|Ga0308421_1076167	Not Available	860	Open in IMG/M
3300032057\|Ga0308421_1115101	Not Available	633	Open in IMG/M
3300032058\|Ga0308419_1066624	All Organisms → Viruses → Predicted Viral	1159	Open in IMG/M
3300032058\|Ga0308419_1085075	Not Available	949	Open in IMG/M
3300032058\|Ga0308419_1086629	Not Available	936	Open in IMG/M
3300032058\|Ga0308419_1118017	Not Available	732	Open in IMG/M
3300032356\|Ga0308414_1232581	Not Available	509	Open in IMG/M
3300034647\|Ga0372968_032897	Not Available	676	Open in IMG/M
3300034649\|Ga0372972_025604	Not Available	892	Open in IMG/M
3300034649\|Ga0372972_036084	Not Available	699	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Thermal Springs	Environmental → Aquatic → Thermal Springs	100.00%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Hot Spring Phototrophic Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat	68.42%
Anoxygenic And Chlorotrophic Microbial Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic Microbial Mat	23.68%
Anoxygenic And Chlorotrophic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Anoxygenic And Chlorotrophic	7.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002493	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS undermat 2012	Environmental	Open in IMG/M
3300003688	Coassembly of YNP Bryant MS undermat 2012 and YNP Bryant MS upper layer 2012	Environmental	Open in IMG/M
3300005247	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2000_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005251	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1700_T MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005452	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaG	Environmental	Open in IMG/M
3300005453	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG	Environmental	Open in IMG/M
3300005483	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP NP_2300 MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005484	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP NP_0830 MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005489	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP NP_1800 MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005496	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP NP_2000 MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006363	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0600_B MetaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010180	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300(2)_B MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010184	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0800_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010186	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_2300_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010187	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0600_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010190	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1400(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010193	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300(2)_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010194	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_0900_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010195	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1500_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010247	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP NP_1800 MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010254	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1400(2)_B MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010255	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS_1300_T MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011323	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP NP_1300 MetaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300026237	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant MS upper layer 2012 (SPAdes)	Environmental	Open in IMG/M
3300026278	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant BLVA 2012 (SPAdes)	Environmental	Open in IMG/M
3300026293	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP Bryant NP 2012 (SPAdes)	Environmental	Open in IMG/M
3300026509	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-T MetaG (SPAdes)	Environmental	Open in IMG/M
3300027279	Anoxygenic and chlorotrophic microbial mat microbial communities from Yellowstone National Park, USA - YNP MS-B MetaG (SPAdes)	Environmental	Open in IMG/M
3300031245	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_P4	Environmental	Open in IMG/M
3300031508	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_me2	Environmental	Open in IMG/M
3300031512	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T8	Environmental	Open in IMG/M
3300031513	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST1-BottomLayer	Environmental	Open in IMG/M
3300031515	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050930_Pe2	Environmental	Open in IMG/M
3300031516	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20051001_T9	Environmental	Open in IMG/M
3300031568	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050630_ee2	Environmental	Open in IMG/M
3300031767	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M1	Environmental	Open in IMG/M
3300031783	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090729_R4cd	Environmental	Open in IMG/M
3300031812	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-BottomLayer	Environmental	Open in IMG/M
3300031830	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe4	Environmental	Open in IMG/M
3300031865	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MSe3	Environmental	Open in IMG/M
3300031875	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060912_MS13	Environmental	Open in IMG/M
3300031878	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M4	Environmental	Open in IMG/M
3300031948	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe1	Environmental	Open in IMG/M
3300031950	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS65	Environmental	Open in IMG/M
3300031958	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20070728_OST2-MatCore	Environmental	Open in IMG/M
3300031966	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS55	Environmental	Open in IMG/M
3300031980	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS-M3	Environmental	Open in IMG/M
3300032033	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060913_OS-M2	Environmental	Open in IMG/M
3300032034	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20060911_MSe2	Environmental	Open in IMG/M
3300032045	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20060914_OS12-65	Environmental	Open in IMG/M
3300032049	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS60	Environmental	Open in IMG/M
3300032057	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS60	Environmental	Open in IMG/M
3300032058	Hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20090730_MS50	Environmental	Open in IMG/M
3300032356	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS50	Environmental	Open in IMG/M
3300034647	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_0600_MSt7 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034648	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_1000_MSt9 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034649	Metatranscriptome of hot spring phototrophic mat microbial communities from Mushroom Spring, Yellowstone National Park, Wyoming, United States - 20050701_1400_MSt11 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24185J35167_10453703	3300002493	Anoxygenic And Chlorotrophic Microbial Mat	MKCRSKSEPRWKRKERSVLKALQAIFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQ
Ga0061020_10560731	3300003688	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSKNEPRWKRKERGVLKALQATFGRVSDPSLARLLSSTGRVGHLTRFGIDGFVGNNPGFAVEVKARRKMLTKPTL
Ga0061020_11107281	3300003688	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGDNPGFAVE
Ga0068637_10170512	3300005247	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSEPRWKRKERDALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLT
Ga0068634_10106012	3300005251	Anoxygenic And Chlorotrophic Microbial Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAV
Ga0068706_10856192	3300005452	Anoxygenic And Chlorotrophic	MTYRSKSEPRWKRKEREAVKALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARF
Ga0068706_10869941	3300005452	Anoxygenic And Chlorotrophic	MKSRSEPRWKRKEREALRALQAIFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRA
Ga0068705_100937481	3300005453	Anoxygenic And Chlorotrophic	MKSRSEPRWKRKEREALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNDPGYAVEVKARRKMLTKPTLDALLQTIDRAARFERIPLFVLVFGDDV
Ga0068681_1658461	3300005483	Anoxygenic And Chlorotrophic Microbial Mat	VGTKKSRSEPRWKRKEREVIKFLQAAFGRVSDPTLARLLTRTGRVGHLTRFGFDGIVGNEPGFIVEVKARKGMLTKQTIEA
Ga0068673_1586221	3300005484	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSKSEPRWKRKERDAVRALQAIFGRVSDPSLARLLTSTGRAGHLTRFGVDGFVGNNPGFVVEVKARKRMLTKPAIDALL
Ga0068677_1007281	3300005489	Anoxygenic And Chlorotrophic Microbial Mat	VGTKKSRSEPRWKRKEREVIKFLQAAFGRVSDPTLARLLTRTGRVGHLTRFGFDGIVGNEPGFIVEVKA
Ga0068679_10095522	3300005496	Anoxygenic And Chlorotrophic Microbial Mat	VGTRKSRSEPRWKRKEREVIKFLQAAFGRVSDPTLARLVTRTGRVGHLTRFGFDGIVGDDPGYIVEVKA
Ga0068659_10078711	3300006363	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSEPRWKRKERDALRALQATFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGNDPGYAVEVKARRKMLTKPTLD
Ga0124937_10357762	3300010180	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGNEPGFAVEVKAR
Ga0124920_10909663	3300010184	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSEPRWKRKEREALRALQAIFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGNEPGFVVEVK
Ga0124916_10822841	3300010186	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSEPRWKRKEREALRALQAIFGRVGDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKR
Ga0124918_10029291	3300010187	Anoxygenic And Chlorotrophic Microbial Mat	MKTFRSKSEPRWKRKEREAVKALQAIFGRVSDPSLARLLSSTGRVGHLTRFGIDGFVGNNPGFAVEVKARRKMLTKPTLDALLQTIDRAAR
Ga0124925_10343222	3300010190	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLARLLSSTGRVGHLTRFGIDGFVGNNPGFAVEVK
Ga0124924_12624441	3300010193	Anoxygenic And Chlorotrophic Microbial Mat	MKCRSKSEPRWKRKEREALKALQAIFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFA
Ga0124921_11335591	3300010194	Anoxygenic And Chlorotrophic Microbial Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKM
Ga0124921_12070371	3300010194	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAAR
Ga0124911_11317942	3300010195	Anoxygenic And Chlorotrophic Microbial Mat	MKCRSKSEPRWKRKEREALKALQALFGRVSDPSLARLLTSTGRVGHLTRFGIDGFVGNNPGFAVEVKARRKMLTKPTLDALLLTIDRAARFERI
Ga0124945_10226112	3300010247	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSKSEPRWKRKERDAVRALQAIFGRVSDPSLARLLTSTGRAGHLTRFGVDGFVGNNP
Ga0124938_10496761	3300010254	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNDPGYAVE
Ga0124910_10017441	3300010255	Anoxygenic And Chlorotrophic Microbial Mat	MKTFRSKSEPRWKRKEREAVKALQAIFGRVSDPSLARLLSSTGRVGHLTRFGIDGFVGDN
Ga0138355_11628151	3300011323	Anoxygenic And Chlorotrophic Microbial Mat	MKFRSKSEPRWKRKERDAVRALQAIFGRVSDPSLARLLTSTGRVGRQTRFGVDGFVGNN
Ga0209750_10047414	3300026237	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSKSEPRWKRKERDALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNDPGYAVEVKARRKMLTKPTLDALLQTIDRAARFERIPLFVLVFGD
Ga0209750_10426671	3300026237	Anoxygenic And Chlorotrophic Microbial Mat	MKRSRSEPKWKRKEREVIAALQATFGRVSDPTLARLLTSTGRVGHLTRFGFDGIVGDNPGFIVEVKARKGMLTKQTIDALLQTVDRAAQ
Ga0209018_11104291	3300026278	Anoxygenic And Chlorotrophic Microbial Mat	MKSRSKKEPRWKRKERDAVRALQAIFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVG
Ga0209227_10439294	3300026293	Anoxygenic And Chlorotrophic Microbial Mat	VGTKKSRSEPRWKRKEREVIKFLQAAFGRVSDPTLARLLTRTGRVGHLTRFGFDGIVGNEPGF
Ga0209809_10754403	3300026509	Anoxygenic And Chlorotrophic	MKCRSKSEPRWKRKEREALKALQALFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARFER
Ga0209809_11161621	3300026509	Anoxygenic And Chlorotrophic	MKSRSEPRWKRKEREALRALQAIFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDA
Ga0209809_11353352	3300026509	Anoxygenic And Chlorotrophic	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARFERIPLFV
Ga0209809_11457591	3300026509	Anoxygenic And Chlorotrophic	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARFERIPLFV
Ga0209691_10794402	3300027279	Anoxygenic And Chlorotrophic	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARFE
Ga0209691_10857852	3300027279	Anoxygenic And Chlorotrophic	MKCRSKSEPRWKRKEREALKALQALFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARFE
Ga0308395_10703931	3300031245	Hot Spring Phototrophic Mat	MKSRSKNEPRWKRKERGVLKALQATFGRVSDPSLARLLSSTGRVGHLTRFGIDGFVGNNPGFAVEVK
Ga0308395_11482152	3300031245	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLSSTGRVGHLTRFGIDGFVGNNPGFAVEVK
Ga0308394_10524323	3300031508	Hot Spring Phototrophic Mat	MKTFRSKSEPRWKRKEREAVKALQAIFGRVSDPSLTRLLSSTGRVGHLTRFGVDGFVGNEPGFAVEVKAR
Ga0308394_10546373	3300031508	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQATFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARFERIPLFVLVF
Ga0308394_10564991	3300031508	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFVVEVKARRKMLTKPTLDALLQTIDRAA
Ga0308394_10567951	3300031508	Hot Spring Phototrophic Mat	MKSRSKSEPRWKRKERDALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNDPGYAVEVKA
Ga0308394_11006512	3300031508	Hot Spring Phototrophic Mat	MKCRSKSEPRWKRKEREALKALQALFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGNE
Ga0308397_10450791	3300031512	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFVVEVKARKRMLTKPTLDALLQTIDRAA
Ga0308397_10805681	3300031512	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKERSVLKALQAIFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTIDRAARFERIPLFVLVFGDD
Ga0308412_10002181	3300031513	Hot Spring Phototrophic Mat	LTKCRSKSEPRWKRKERSVLKALQATFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAV
Ga0308412_100267312	3300031513	Hot Spring Phototrophic Mat	MKSRSKNEPRWKRKERDALRALQAVFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKML
Ga0308412_10625771	3300031513	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTIDRAARYERIPLFV
Ga0308412_10652823	3300031513	Hot Spring Phototrophic Mat	MKTFRSKSEPRWKRKEREAVKALQAIFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTIDRAA
Ga0308412_10773613	3300031513	Hot Spring Phototrophic Mat	MKCRSKSEPRWKRKEREALKALQALFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTIDRAARFERIPL
Ga0308412_10968133	3300031513	Hot Spring Phototrophic Mat	MKSRSKSEPRWKRKERAALKALQATFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNP
Ga0308412_11799621	3300031513	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKTLQALFGRVGDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARR
Ga0308396_10445981	3300031515	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARFERIPLFVLVFGDDVPTRT
Ga0308396_10744931	3300031515	Hot Spring Phototrophic Mat	MKRSRSEPKWKRKEREVIAALQATFGRVSDPTLARLLTATGRVGHLTRFGVDGFV
Ga0308398_10908531	3300031516	Hot Spring Phototrophic Mat	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQ
Ga0308393_10481483	3300031568	Hot Spring Phototrophic Mat	MTYRSKSEPRWKRKEREAVKALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKA
Ga0308393_10757682	3300031568	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTID
Ga0308401_100008638	3300031767	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGDNPGFAVEVKA
Ga0308401_10293641	3300031767	Hot Spring Phototrophic Mat	MTYRSKSEPRWKRKEREALKALQALFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTIDRAARFERIPLFVLVFGDDVPTR
Ga0308401_10380643	3300031767	Hot Spring Phototrophic Mat	LTTFRSKSEPRWKRKERSVLKALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTIDRAARFERIPLFVLVFGDD
Ga0308401_10383811	3300031767	Hot Spring Phototrophic Mat	LRPFARGCERRKKMKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTPTGRVGHLTRFGVDG
Ga0308401_10574702	3300031767	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKERDALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTI
Ga0308418_10348993	3300031783	Hot Spring Phototrophic Mat	LTKRSRSEPRWKRKEREVIAALQAIFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGNNPGFAVEVKARKRMLTKQTIDALL
Ga0308418_10357041	3300031783	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNDPGYAVEVKARRKMLTKPTLDALLQTIDRAARFERIPLFVLVFGDDVPT
Ga0308418_10386793	3300031783	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFVVEVKARRKMLTKPTLDALLQTIDRAARFERIPLFVLVFGDDV
Ga0308418_10710032	3300031783	Hot Spring Phototrophic Mat	MKCRSKSEPRWKRKERSVLKALQAIFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAA
Ga0308411_100439004	3300031812	Hot Spring Phototrophic Mat	MKSRSKSEPRWKRKEREALKALQATFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNP
Ga0308411_100947731	3300031812	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKP
Ga0308411_101099923	3300031812	Hot Spring Phototrophic Mat	LTKCLSKSEPRWKRKERSVLKALQATFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTID
Ga0308411_102291961	3300031812	Hot Spring Phototrophic Mat	MKTFRSKSEPRWKRKERSVLKALQATFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGNNPGFAVEVKA
Ga0308411_102814521	3300031812	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKTLQALFGRVGDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKP
Ga0308411_102839792	3300031812	Hot Spring Phototrophic Mat	MKKFRSEPRWKRKEREAVKALQAIFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGNNPGYAVEVKARKRMLTRPTLDALLQTID
Ga0308409_10330913	3300031830	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNDPGYAVEVKARRKMLTKPTLDALLQTIDRAAR
Ga0308409_10499571	3300031830	Hot Spring Phototrophic Mat	MKSRSKSEPRWKRKERDALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNDPGYAVEVKARRKMLTKPTLDALLQTIDRAAR
Ga0308409_10685511	3300031830	Hot Spring Phototrophic Mat	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGDNPGFAVEVKARKRMLTKPTLDALLQTIDRAARFERIPLFVLVFGDD
Ga0308408_10172361	3300031865	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKR
Ga0308408_10543833	3300031865	Hot Spring Phototrophic Mat	MKSRSEPRWKRKERDALRALQAIFGRVSDPSLSRLLSSTGRVGHLTRFGVDGFVGDNPGFAVEVK
Ga0308405_10493341	3300031875	Hot Spring Phototrophic Mat	MKSRSKNEPRWKRKERGVLKALQATFGRVGDPSLARLLSSTGRVGHLTRFGIDGFVGNNPGFAVEVKARRK
Ga0308405_11144181	3300031875	Hot Spring Phototrophic Mat	MKCRSKSEPRWKRKEREALKALQATFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARFER
Ga0308404_10211543	3300031878	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREAVKALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGDNPGFAVEVKARR
Ga0308406_10352573	3300031948	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALRALQAIFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKA
Ga0308406_10965631	3300031948	Hot Spring Phototrophic Mat	MKCRSKSEPRWKRKEREALKALQALFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKA
Ga0308417_10544531	3300031950	Hot Spring Phototrophic Mat	MKSRSKSEPRWKRKEREAVKALQATFGRVSDPSLSRLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTIDR
Ga0308417_10867631	3300031950	Hot Spring Phototrophic Mat	MKKSRSKSEPRWKRKEREALKALQALFGRVSDPSLSRFLTSTGRVGHLTRFGVDGFVGNNPGFAVEVKARRKMLTKPTLDALLQTIDRAA
Ga0308417_11864722	3300031950	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREAIKALQAVFGRVGDPSLARLLTSTGRVGHLTRFGVDGFVGNNPGFAVEVK
Ga0308410_11845791	3300031958	Hot Spring Phototrophic Mat	MKSRSKSEPRWKRKERSVLKALQATFGRVGDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARKRMLTKPTLDALLQTIDRAAR
Ga0308410_11953162	3300031958	Hot Spring Phototrophic Mat	LTKCRSEPRWKRKERGVLKALQATFGRVGDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARKRMLTKPTLDALLQTIDRAARY
Ga0308420_12338551	3300031966	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFVVEVKARKRMLTKPTLDALLQTIDRAARF
Ga0308403_10036095	3300031980	Hot Spring Phototrophic Mat	LTKCLSKSEPRWKRKERSVLKALQATFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDAL
Ga0308403_10382201	3300031980	Hot Spring Phototrophic Mat	MKCRSKSEPRWKRKEREALKALQALFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQ
Ga0308403_10587631	3300031980	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREAVKALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNNPGFAVEVKARRKMLTKPTLDALLQTIDRAARFDRIPLFVLV
Ga0308402_10284303	3300032033	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKERDALRALQATFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQT
Ga0308407_10424851	3300032034	Hot Spring Phototrophic Mat	LTKCRSKSEPRWKRKERSVLKALQATFGRVSDPSLSRLLSSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTNPTLD
Ga0308407_10524811	3300032034	Hot Spring Phototrophic Mat	MKTFRSKSEPRWKRKEREAVKALQAIFGRVSDPSLARLLSSTGRVGHLTRFGIDGFVGNNPGFAVEVKA
Ga0308407_10582923	3300032034	Hot Spring Phototrophic Mat	MKTFRSKSEPRWKRKEREAVKALQAIFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGNNPGFAVEVKARKH
Ga0308407_10977462	3300032034	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTIDRAARFERIPLFVLVFGDDVP
Ga0308400_10025951	3300032045	Hot Spring Phototrophic Mat	MKSRSKSEPRWKRKERAALKALQATFGRVSDPSLARLLTSSGRVGHLTRFGVDGFVGDNPGF
Ga0308400_10303433	3300032045	Hot Spring Phototrophic Mat	MKSRSKSEPRWKRKEREALKALQATFGRVSDPSLARLLTSSGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLT
Ga0308400_11277641	3300032045	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKPTLDALLQTIDRAARFERIPLFVLVFGDDVPT
Ga0308416_10212741	3300032049	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLSRLLTPTGRVGHLTRFGVDGFVGNNPGFAVEVKA
Ga0308416_10456923	3300032049	Hot Spring Phototrophic Mat	MKSRSKSEPRWKRKERDALRALQAVFGRVSDPALARLLTPTGRVGHLTRFGVDGFVGNNPGFAVEVKARRKMLTKPTLDALLQTIDRAA
Ga0308421_10530681	3300032057	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALRALQAIFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGDNPGFAVEVKARRKMLTKSTL
Ga0308421_10686801	3300032057	Hot Spring Phototrophic Mat	MKSRSKNEPRWKRKERGVLKALQATFGRVGDPSLARLLTSTGRVGHLTRFGVDGFVGNNPGFAVEVKARRKMLTKPTLDALLQTIDRAAR
Ga0308421_10761671	3300032057	Hot Spring Phototrophic Mat	LTKQYHSEPRWKRKEREVLKVLQTTFGRVSDPTLARLLTATGRVGHLTRFGVDGFVGNNPGF
Ga0308421_11151012	3300032057	Hot Spring Phototrophic Mat	MKSRSESRWKRKEREALRALQATFGRVSDPSLARLLTPTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARFE
Ga0308419_10666243	3300032058	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLSSTGRVGHLTRFGIDGFVGNNPGFAVEVKARRKMLTKPTLDALLQTID
Ga0308419_10850753	3300032058	Hot Spring Phototrophic Mat	MKSRSKSEPRWKRKERDALRALQATFGRVGDPSLARLLTPTGRVGHLTRFGVDGFVGNDPGYAVEVK
Ga0308419_10866293	3300032058	Hot Spring Phototrophic Mat	MKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGDNPGF
Ga0308419_11180172	3300032058	Hot Spring Phototrophic Mat	MKCRSKSEPRWKRKERDALRALQATFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGNEPGFAVEVKARKRMLTKPTLDALLQTIDRAARFERIPLFVLVF
Ga0308414_12325811	3300032356	Hot Spring Phototrophic Mat	MKKSHSSEPRWKRKERDAIKALQAVFGRVSDPSLARLLTSTGRVGHLTRFGVDGFVGDNPGFAVEVKARKKMLTKQTIEALLQTIDRAA
Ga0372968_032897_1_201	3300034647	Hot Spring Phototrophic Mat	MKSRSESRWKRKEREALRALQATFGRVGDPSLARLLTSTGRVGHLTRFGVDGFVGNNPGFAVEVKAR
Ga0372970_030101_1_168	3300034648	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLSSTGRVGHLTRFGIDGFVG
Ga0372972_025604_611_892	3300034649	Hot Spring Phototrophic Mat	MKSRSKNEPRWKRKERGVLKALQATFGRVGDPSLARLLSSTGRVGHLTRFGIDGFVGNNPGFAVEVKARRKMLTKPTLDALLQTIDRAARFERI
Ga0372972_036084_489_698	3300034649	Hot Spring Phototrophic Mat	MKKSRSEPRWKRKEREALKALQALFGRVSDPSLARLLSSTGRVGHLTRFGVDGFVGDNPGFAVEVKARKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F081391

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences