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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F074797 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 119 |
| Average Sequence Length | 46 residues |
| Representative Sequence | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADVIKEA |
| Number of Associated Samples | 97 |
| Number of Associated Scaffolds | 117 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 58.82 % |
| % of genes near scaffold ends (potentially truncated) | 40.34 % |
| % of genes from short scaffolds (< 2000 bps) | 82.35 % |
| Associated GOLD sequencing projects | 80 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.12 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (76.471 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (28.571 % of family members) |
| Environment Ontology (ENVO) | Unclassified (30.252 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (44.538 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.12 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 117 Family Scaffolds |
|---|---|---|
| PF00078 | RVT_1 | 13.68 |
| PF08388 | GIIM | 12.82 |
| PF01381 | HTH_3 | 1.71 |
| PF04397 | LytTR | 0.85 |
| PF14684 | Tricorn_C1 | 0.85 |
| PF01934 | HepT-like | 0.85 |
| PF13751 | DDE_Tnp_1_6 | 0.85 |
| PF02517 | Rce1-like | 0.85 |
| PF13304 | AAA_21 | 0.85 |
| PF12675 | DUF3795 | 0.85 |
| PF13715 | CarbopepD_reg_2 | 0.85 |
| PF02782 | FGGY_C | 0.85 |
| PF13551 | HTH_29 | 0.85 |
| PF04389 | Peptidase_M28 | 0.85 |
| PF07504 | FTP | 0.85 |
| PF00665 | rve | 0.85 |
| PF05598 | DUF772 | 0.85 |
| PF00491 | Arginase | 0.85 |
| PF14706 | Tnp_DNA_bind | 0.85 |
| PF12680 | SnoaL_2 | 0.85 |
| PF00583 | Acetyltransf_1 | 0.85 |
| PF08843 | AbiEii | 0.85 |
| COG ID | Name | Functional Category | % Frequency in 117 Family Scaffolds |
|---|---|---|---|
| COG0010 | Arginase/agmatinase family enzyme | Amino acid transport and metabolism [E] | 0.85 |
| COG1266 | Membrane protease YdiL, CAAX protease family | Posttranslational modification, protein turnover, chaperones [O] | 0.85 |
| COG2253 | Predicted nucleotidyltransferase component of viral defense system | Defense mechanisms [V] | 0.85 |
| COG2361 | HEPN domain protein, predicted toxin of MNT-HEPN system | Defense mechanisms [V] | 0.85 |
| COG2445 | Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family | General function prediction only [R] | 0.85 |
| COG2801 | Transposase InsO and inactivated derivatives | Mobilome: prophages, transposons [X] | 0.85 |
| COG2826 | Transposase and inactivated derivatives, IS30 family | Mobilome: prophages, transposons [X] | 0.85 |
| COG3227 | Zn-dependent metalloprotease (Neutral protease B) | Posttranslational modification, protein turnover, chaperones [O] | 0.85 |
| COG3316 | Transposase (or an inactivated derivative), DDE domain | Mobilome: prophages, transposons [X] | 0.85 |
| COG4449 | Predicted protease, Abi (CAAX) family | General function prediction only [R] | 0.85 |
| COG4584 | Transposase | Mobilome: prophages, transposons [X] | 0.85 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 76.47 % |
| All Organisms | root | All Organisms | 23.53 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 28.57% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment | 8.40% |
| Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment | 7.56% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil | 6.72% |
| Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 5.88% |
| Wetland | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland | 5.04% |
| Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 4.20% |
| Untreated Peat Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil | 3.36% |
| Soil | Environmental → Terrestrial → Soil → Clay → Unclassified → Soil | 3.36% |
| Freshwater Lake Sediment | Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment | 2.52% |
| Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 2.52% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil | 2.52% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 1.68% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 1.68% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.68% |
| Natural And Restored Wetlands | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands | 1.68% |
| Fen | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen | 1.68% |
| Prmafrost Soil | Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil | 1.68% |
| Deep Subsurface | Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface | 1.68% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment | 0.84% |
| Lake Sediment | Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment | 0.84% |
| Freshwater Wetlands | Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands | 0.84% |
| Freshwater | Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater | 0.84% |
| Freshwater | Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater | 0.84% |
| Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland | 0.84% |
| Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil | 0.84% |
| Bog | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog | 0.84% |
| Peat Soil | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil | 0.84% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2088090005 | Sediment microbial communities from Lake Washington, Seattle, for Methane and Nitrogen Cycles, original sample replicate 1 | Environmental | Open in IMG/M |
| 2124908028 | Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3 | Environmental | Open in IMG/M |
| 2124908037 | Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3 | Environmental | Open in IMG/M |
| 2124908039 | Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Bog Site B4 | Environmental | Open in IMG/M |
| 3300001453 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 | Environmental | Open in IMG/M |
| 3300001870 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 | Environmental | Open in IMG/M |
| 3300002069 | Barrow Graham LP Ref core NGADG0002-212 (Barrow Graham LP Ref core NGADG0002-212,NGADG0004-211, ASSEMBLY_DATE=20131010) | Environmental | Open in IMG/M |
| 3300002072 | Barrow Graham LP Ref core NGADG0011-211 (Barrow Graham LP Ref core NGADG0011-211,NGADG0004-312, ASSEMBLY_DATE=20131005) | Environmental | Open in IMG/M |
| 3300002538 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 | Environmental | Open in IMG/M |
| 3300002549 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 | Environmental | Open in IMG/M |
| 3300002550 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 | Environmental | Open in IMG/M |
| 3300002564 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312 | Environmental | Open in IMG/M |
| 3300002569 | Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 | Environmental | Open in IMG/M |
| 3300003369 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A | Environmental | Open in IMG/M |
| 3300003992 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1 | Environmental | Open in IMG/M |
| 3300004151 | Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 5 | Environmental | Open in IMG/M |
| 3300005938 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 | Environmental | Open in IMG/M |
| 3300005947 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190 | Environmental | Open in IMG/M |
| 3300006640 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B | Environmental | Open in IMG/M |
| 3300006795 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B | Environmental | Open in IMG/M |
| 3300006864 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 | Environmental | Open in IMG/M |
| 3300006950 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one | Environmental | Open in IMG/M |
| 3300007959 | Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanotroph_Enrichment_5 | Environmental | Open in IMG/M |
| 3300009029 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189 | Environmental | Open in IMG/M |
| 3300009039 | Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm | Environmental | Open in IMG/M |
| 3300009053 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 | Environmental | Open in IMG/M |
| 3300009075 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 | Environmental | Open in IMG/M |
| 3300009078 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 | Environmental | Open in IMG/M |
| 3300009081 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 | Environmental | Open in IMG/M |
| 3300009082 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 | Environmental | Open in IMG/M |
| 3300009091 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300009111 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 | Environmental | Open in IMG/M |
| 3300009167 | Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2) | Environmental | Open in IMG/M |
| 3300009169 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 | Environmental | Open in IMG/M |
| 3300009179 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 | Environmental | Open in IMG/M |
| 3300010131 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_A (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300011391 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT163_2 | Environmental | Open in IMG/M |
| 3300012152 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT590_2 | Environmental | Open in IMG/M |
| 3300012931 | Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG | Environmental | Open in IMG/M |
| 3300014309 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleB_D1 | Environmental | Open in IMG/M |
| 3300014310 | Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1 | Environmental | Open in IMG/M |
| 3300014502 | Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300014839 | Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300018059 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex | Environmental | Open in IMG/M |
| 3300018068 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2 | Environmental | Open in IMG/M |
| 3300025495 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025533 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes) | Environmental | Open in IMG/M |
| 3300025650 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes) | Environmental | Open in IMG/M |
| 3300025725 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes) | Environmental | Open in IMG/M |
| 3300025750 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes) | Environmental | Open in IMG/M |
| 3300025780 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1 (SPAdes) | Environmental | Open in IMG/M |
| 3300025836 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes) | Environmental | Open in IMG/M |
| 3300025846 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes) | Environmental | Open in IMG/M |
| 3300025854 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes) | Environmental | Open in IMG/M |
| 3300025865 | Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes) | Environmental | Open in IMG/M |
| 3300025878 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes) | Environmental | Open in IMG/M |
| 3300025888 | Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes) | Environmental | Open in IMG/M |
| 3300025891 | Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes) | Environmental | Open in IMG/M |
| 3300026271 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes) | Environmental | Open in IMG/M |
| 3300026273 | Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes) | Environmental | Open in IMG/M |
| 3300026381 | Peat soil microbial communities from Stordalen Mire, Sweden - G.F.S.T-25 | Environmental | Open in IMG/M |
| 3300027265 | Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanotroph_Enrichment_5 (SPAdes) | Environmental | Open in IMG/M |
| 3300027693 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027731 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027743 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027792 | Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes) | Environmental | Open in IMG/M |
| 3300027871 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027877 | Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes) | Environmental | Open in IMG/M |
| 3300027878 | Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-05 (SPAdes) | Environmental | Open in IMG/M |
| 3300027897 | Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes) | Environmental | Open in IMG/M |
| 3300030294 | II_Fen_E3 coassembly | Environmental | Open in IMG/M |
| 3300030339 | III_Bog_N1 coassembly | Environmental | Open in IMG/M |
| 3300030717 | Metatranscriptome of soil microbial communities from Risofladan, Vaasa, Finland - UN-3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030943 | III_Fen_N2 coassembly | Environmental | Open in IMG/M |
| 3300031578 | Soil microbial communities from Risofladan, Vaasa, Finland - TR-2 | Environmental | Open in IMG/M |
| 3300031673 | Soil microbial communities from Risofladan, Vaasa, Finland - TR-3 | Environmental | Open in IMG/M |
| 3300031707 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20 | Environmental | Open in IMG/M |
| 3300031726 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1 | Environmental | Open in IMG/M |
| 3300031772 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20 | Environmental | Open in IMG/M |
| 3300031834 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0 | Environmental | Open in IMG/M |
| 3300031873 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0 | Environmental | Open in IMG/M |
| 3300031902 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2 | Environmental | Open in IMG/M |
| 3300031918 | III_Fen_N3 coassembly | Environmental | Open in IMG/M |
| 3300031952 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40 | Environmental | Open in IMG/M |
| 3300032143 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0 | Environmental | Open in IMG/M |
| 3300032164 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0 | Environmental | Open in IMG/M |
| 3300032173 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top | Environmental | Open in IMG/M |
| 3300032401 | Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0 | Environmental | Open in IMG/M |
| 3300033406 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT | Environmental | Open in IMG/M |
| 3300033433 | Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN | Environmental | Open in IMG/M |
| 3300033434 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b | Environmental | Open in IMG/M |
| 3300033486 | Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A | Environmental | Open in IMG/M |
| 3300033804 | Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_20 | Environmental | Open in IMG/M |
| 3300034126 | Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_16 | Environmental | Open in IMG/M |
| 3300034128 | Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16 | Environmental | Open in IMG/M |
| 3300034157 | Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_18 | Environmental | Open in IMG/M |
| 3300034257 | Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_02D_17 | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| LWSO_04244410 | 2088090005 | Freshwater Sediment | MNESEPSMRCRETILSVKTTGSLTLGEECGGYLFTGYMADVIKEA |
| beta3_all_00888870 | 2124908028 | Soil | MNESEPSMRCRENELSVKTTGTLTLGEECSGNLFTGYMADVIKKA |
| B3_GZBA_v_00028040 | 2124908037 | Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADGIKKA |
| B3_v_00166020 | 2124908039 | Soil | IEKMNESEPSMRCRETELSVKTTGSLILGEECGGYLFTGYMADVIKEA |
| JGI20197J15136_10113601 | 3300001453 | Arctic Peat Soil | MNESEPPMRCRENEHSVKTQRSMMPGEECSGNLLTGYMADVIEEA* |
| JGI24129J20441_10848382 | 3300001870 | Arctic Peat Soil | MNESEPSMRCRETILSVKTTGSLTLGEECSGYLFTGYMADVIKEA* |
| JGIcombinedJ21912_100415543 | 3300002069 | Arctic Peat Soil | EKMNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADGIKKA* |
| JGIcombinedJ21912_101020322 | 3300002069 | Arctic Peat Soil | RCRETILSVKTTGSLMLGEECGGYLFTGYMADVIKKA* |
| JGIcombinedJ21912_101409822 | 3300002069 | Arctic Peat Soil | ESEPSMRCRETVLSVKTTGSLMLGEECNSYLFTGYMADGIKEA* |
| JGIcombinedJ21912_102148422 | 3300002069 | Arctic Peat Soil | VRIEKMNESEPSMRCRETILSVKTTGSLMLGEECGGYLFTGYMADVIKXA* |
| JGIcombinedJ21914_100401522 | 3300002072 | Arctic Peat Soil | SMRCRETILSVKTTGSLTLGEECGGYLFTGYMADVIKKA* |
| JGI24132J36420_100414321 | 3300002538 | Arctic Peat Soil | MNESEPSMRCRETILSVKTTGSLTLGEECGGYLFTGYMADVIKKA* |
| JGI24130J36418_100781572 | 3300002549 | Arctic Peat Soil | MNESEPSMRCRETILSVKTTGSLMLGEECGGYLFTGYMADVIKKA* |
| JGI24131J36419_100472513 | 3300002550 | Arctic Peat Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADGIKKA* |
| JGI24131J36419_101172291 | 3300002550 | Arctic Peat Soil | MNESEPSMRCRETILSVKTTGSLTLGEECGGYLFTGYMADVIKEA* |
| JGI24134J36421_101491501 | 3300002564 | Arctic Peat Soil | MGKKSCRKDKVRIEKMNESEPPMRCRENEHPVKTHWSLILGEECSGYLLTGYMAGVKEEA |
| JGI24136J36422_100047429 | 3300002569 | Arctic Peat Soil | MNESEPSMRCRETILSVKTTGSLMLGEECGGYLFTGYMADVIK |
| JGI24136J36422_100919651 | 3300002569 | Arctic Peat Soil | LNGIGKWSCQKDQVRIEKMNESEPSVRCRENVLLVKTTGSLTLGEECSGHLSTGYMADVIKEA* |
| JGI24140J50213_100279382 | 3300003369 | Arctic Peat Soil | MNESEPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADGIKKA* |
| Ga0055470_101462022 | 3300003992 | Natural And Restored Wetlands | MNESEPSVRCRENEHSVKTTGPLMLGEECSGYLFTGYMADVI* |
| Ga0066602_102704542 | 3300004151 | Freshwater | VRIEKMNESEPSMRCRETVLSVKTTSSLTLEEECGGYLFTGYMADGIKEA* |
| Ga0066795_100277533 | 3300005938 | Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADGIKEA* |
| Ga0066794_100588053 | 3300005947 | Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADVIKKA* |
| Ga0066794_100981611 | 3300005947 | Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTG |
| Ga0066794_102076171 | 3300005947 | Soil | ETVLSVKTTGSLMLGEECGGYLFTGYMADGIKEA* |
| Ga0066794_102435031 | 3300005947 | Soil | MRCRETVLSVKTTGSLMLGEECGGYLFTGYMADVIKKA* |
| Ga0075527_101461911 | 3300006640 | Arctic Peat Soil | ESEPSMRCRETVLSVKTTGSSTLGEECGGYLFTGYMADGIKKA* |
| Ga0075520_12193033 | 3300006795 | Arctic Peat Soil | MNESEPSMRCRENELSVKTTGTCTPGEECSGYLFTGYMADVIKKA* |
| Ga0066797_11088772 | 3300006864 | Soil | MNESEPSMRCRETVLSVKTTGSFRLGEECSGDLFTGYMADGIKEA* |
| Ga0075524_102924771 | 3300006950 | Arctic Peat Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTDYMADGIKKA* |
| Ga0079306_11210562 | 3300007959 | Deep Subsurface | MNESEPSMRCRENELSVKTAASLAAEEERGGNLFTGYVADVIQGA* |
| Ga0066793_102415931 | 3300009029 | Prmafrost Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECNGYLFTGYMADGIKEA* |
| Ga0066793_108812161 | 3300009029 | Prmafrost Soil | MRCRENEHSVKTHWSLMPGEECSGYLISGYVADVIEKA* |
| Ga0105152_102718182 | 3300009039 | Lake Sediment | MNESEPSMRCRENELSVKTTGTLTLGEECSGYLFTGYMADVIKKA* |
| Ga0105095_100125211 | 3300009053 | Freshwater Sediment | LNGIGKRSCQKDQVRIEKMNESEPSMRCRENVLSVKTTGSLTLGEECSGHLSTGYMADGIKEA* |
| Ga0105090_107277611 | 3300009075 | Freshwater Sediment | MNEIEPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADGIKEA* |
| Ga0105106_105514281 | 3300009078 | Freshwater Sediment | MNESEPSMRCRENELSVKTQRSLMPGEECSGHLSTGYMADGIKEA* |
| Ga0105098_102245831 | 3300009081 | Freshwater Sediment | MNESEPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADGIKEA* |
| Ga0105099_102499512 | 3300009082 | Freshwater Sediment | MNESEPSMRCRETVLSVKTTGSSTLGEECGGYLFTGYMADGIKEA* |
| Ga0102851_105288853 | 3300009091 | Freshwater Wetlands | LMKCRENAQSVKTTGLLTLGEECSGYLFTGYMADIIKEA* |
| Ga0115026_101181941 | 3300009111 | Wetland | MSCWKDKVRIEKMNESKPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADGIKKA* |
| Ga0113563_119859471 | 3300009167 | Freshwater Wetlands | CRETVLSVKTTGSLTLGEECGGYLFTGYMADGIKKA* |
| Ga0113563_124097981 | 3300009167 | Freshwater Wetlands | MNESEPSRRCRENVLSVKTQRSMMPGEECSGHLVT |
| Ga0105097_101754892 | 3300009169 | Freshwater Sediment | EKMNEIEPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADGIKEA* |
| Ga0115028_101650011 | 3300009179 | Wetland | MNESEPSMRCRETVLSVKTTGSLTLGEECGGYLFTGHMADGIKKA* |
| Ga0115594_10145161 | 3300010131 | Wetland | NVSEPPVRCRENVHSVKTTGSLTLGEECSGYLFTGYMADVIKGA* |
| Ga0115594_10145162 | 3300010131 | Wetland | MNVSEPPVRCRENVHSVKTTGSLTLGEECSGYLFTGYMADVI |
| Ga0137331_10091551 | 3300011391 | Soil | MNESEPSMRCRETILSVKTTGSLRLGEECSGYLFTGYMADVIKEA* |
| Ga0137347_10648161 | 3300012152 | Soil | MNESEPSMRCRETVLSVKTTGSSTLGEECGGYLFTGYMADVIKEA* |
| Ga0153915_101277222 | 3300012931 | Freshwater Wetlands | LDQVRIEKINESEPPVRCRENVDSVKTNGSLTLGEECSRYLLNGYMADGIKGA* |
| Ga0075317_11195771 | 3300014309 | Natural And Restored Wetlands | PSMRCRENELSVKTQRSLMPGEECSGHLSTGYMADVIKKA* |
| Ga0075331_12074232 | 3300014310 | Natural And Restored Wetlands | MNENEPLMKCRETAQSVKTTGPLTLGEECSGYLFTGCMADGMKEA* |
| Ga0182021_116274582 | 3300014502 | Fen | LNGIGKKSCWKDKVRIEKMNESEPSMRCRETILSVKTTGSLTLGEECGGYLLTGYMADVIKEA |
| Ga0182027_105933712 | 3300014839 | Fen | MNESEPSMRCRENELSVKTTGTLTLGEECSGYLFTGYMADVIKEA* |
| Ga0184615_100297971 | 3300018059 | Groundwater Sediment | MNESEPSMRCRENELSVKTTGTLTLGEECSGYLFTGYMADVIKKA |
| Ga0184636_11477581 | 3300018068 | Groundwater Sediment | MNESEPSMRCRENELSVKTTGTCTPGEECSGYLFTGYMADVIK |
| Ga0207932_10320251 | 3300025495 | Arctic Peat Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADVIKKA |
| Ga0208584_10291822 | 3300025533 | Arctic Peat Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADVIKEA |
| Ga0208584_10980252 | 3300025533 | Arctic Peat Soil | LNGIGKWSCQKDQVRIEKMNESEPSVRCRENVLLVKTTGSLTLGEECSGHLSTGYMADVIKEA |
| Ga0209385_10324382 | 3300025650 | Arctic Peat Soil | MNESEPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADGIKKA |
| Ga0209638_10407231 | 3300025725 | Arctic Peat Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECNGYLFTGYMADGIKEA |
| Ga0209747_10267011 | 3300025750 | Arctic Peat Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADGIKEA |
| Ga0210100_10064501 | 3300025780 | Natural And Restored Wetlands | MNESEPSVRCRENEHSVKTTGPLMLGEECSGYLFTGYMADVI |
| Ga0209748_12315261 | 3300025836 | Arctic Peat Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECNSYLFTGYMADGIKEA |
| Ga0209538_10168111 | 3300025846 | Arctic Peat Soil | MNESEPSMRCRETILSVKTTGSLTLGEECSGYLFTGYMADVIKEA |
| Ga0209538_10481523 | 3300025846 | Arctic Peat Soil | LNGIGKKSCWKDKVRIEKMNESEPSMRCRETILSVKTTGSLTLGEECGGYLFTGYMADVIKEA |
| Ga0209176_101420672 | 3300025854 | Arctic Peat Soil | CRETILSVKTTGSLMLGEECGGYLFTGYMADVIKKA |
| Ga0209176_102116991 | 3300025854 | Arctic Peat Soil | MNESEPSMRCRETILSVKTTGSLTLGEECGGYLLTGYMADVIK |
| Ga0209226_100289994 | 3300025865 | Arctic Peat Soil | MNESEPSMRCRETILSVKTTGSLMLGEECGGYLFTGYMADVIKK |
| Ga0209584_100746734 | 3300025878 | Arctic Peat Soil | VVKTVLSVKTTGSLILEEECGGYLFTGYMADVIKKA |
| Ga0209584_100792111 | 3300025878 | Arctic Peat Soil | VKTELSVKTTGSLMLGEECGGYLFTGYMADVIKEA |
| Ga0209540_101201211 | 3300025888 | Arctic Peat Soil | LNGIGKRSCQKDQVRIEKMNESEPSVRCRENVLSVKTTGSLTLGEECSGHLSTGYMADVIKEA |
| Ga0209585_105076331 | 3300025891 | Arctic Peat Soil | PHRRFTSMRCRETVLSVKTTGSLMLGEECGGYLFTDYMADGIKKA |
| Ga0209880_10882771 | 3300026271 | Soil | MNESEPSMRCRETILSVKTTGSLMLGEECGGYLFTGYMADVIKEA |
| Ga0209881_10067693 | 3300026273 | Soil | MNESEPSMRCRETVLSVKTTGSFRLGEECSGDLFTGYMADGIKEA |
| Ga0255357_10066461 | 3300026381 | Soil | DKVRIEKMNESEPPMRCRENEQPVKTQRSLMPGEECSGYLFTGYVAGVIEEA |
| Ga0208789_10642251 | 3300027265 | Deep Subsurface | MNESEPSMRCRENELSVKTAASLAAEEERGGNLFTGYVADVIQGA |
| Ga0209704_12218522 | 3300027693 | Freshwater Sediment | MNEIEPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADGIKEA |
| Ga0209592_10402672 | 3300027731 | Freshwater Sediment | LNGIGKRSCQKDQVRIEKMNESEPSMRCRENVLSVKTTGSLTLGEECSGHLSTGYMADGIKEA |
| Ga0209593_100684002 | 3300027743 | Freshwater Sediment | LNGIGKRSCQKDQVRIEKMNESEPSMRCRENVLSVKTTGSLTLGEECSGHLSTGYMADVIKEA |
| Ga0209287_102152282 | 3300027792 | Freshwater Sediment | MNESEPSMRCRETVLSVKTTGSSTLGEECGGYLFTGYMAGGIKKA |
| Ga0209397_100374911 | 3300027871 | Wetland | IEKMNESEPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADGIKEA |
| Ga0209293_100622052 | 3300027877 | Wetland | MNESEPPVRCRENVHSVKTTSSLTLGEECSGYLFTGYMADVIKEA |
| Ga0209181_101687943 | 3300027878 | Freshwater | SEPLMRYRENVLSAKTIGSLLPEEEYSGHLSTGYMAGVIERA |
| Ga0209254_100565512 | 3300027897 | Freshwater Lake Sediment | MNESEPSMRCRETVLSVKTTGSLTLGEECSSYLFTGYMADGIKEA |
| Ga0209254_101100152 | 3300027897 | Freshwater Lake Sediment | MNESEPSMRCRENELSVKTTGTLTLGEECSGYLFTGYMADVIKEA |
| Ga0209254_105588711 | 3300027897 | Freshwater Lake Sediment | RETVLSVKTTGSLTLEEECGGYLFTGYMADGIKEA |
| Ga0311349_102032292 | 3300030294 | Fen | MSCWKDKVRIEKMNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADGIKEA |
| Ga0311360_115165712 | 3300030339 | Bog | ESEPPMRCRENEHPVKTQRSLMPGEECSGNLLTGYMAGVIEEA |
| Ga0307927_10407641 | 3300030717 | Soil | MNESEPPMRCRENELSVKTTGTLTLGEECSGYLFTGYMADVIKEA |
| Ga0311366_105469631 | 3300030943 | Fen | IGKMSCWKDKVRIEKMNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADGIKEA |
| Ga0307376_100190706 | 3300031578 | Soil | MNESEPSMRCRETILSVKTTGSLTLGEECGGYLFTGHMADVIKEA |
| Ga0307377_100230448 | 3300031673 | Soil | MNESEPSMRCRETILSVKTTGSLALGDECGGYLFTGYMADVIKEGMISIQA |
| Ga0307377_100333264 | 3300031673 | Soil | MNESEPSMRCRETILSVKTTGSLMLGEECGGYLFTGYMADVIKKA |
| Ga0315291_101086532 | 3300031707 | Sediment | MNESEPPMRCRENELSVKTTSSLTLGEECSGYLFTGYMADVIKEA |
| Ga0302321_1022601322 | 3300031726 | Fen | MNESEPSMRCRENEHPVKTQRSLMPGEECSGNLLTGYMAGVIEEA |
| Ga0315288_109545042 | 3300031772 | Sediment | LNGIGKRSYQKDQVRIEKMNESEPSMRCRENELSVKTTGTCTPGEECSGYLFTGYMADVIKEA |
| Ga0315290_103147502 | 3300031834 | Sediment | KPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADVIKKA |
| Ga0315297_101957892 | 3300031873 | Sediment | WAVLNGIGKKSCWKDQVRIEKMNESKPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADVIKKA |
| Ga0302322_1004743261 | 3300031902 | Fen | RIEKMNESEPPMRCRENEHPVKTQRSLMPGEECSGNLLTGYMAGVIEEA |
| Ga0311367_110219492 | 3300031918 | Fen | CWKDKVRIEKMNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMADGIKEA |
| Ga0315294_100456324 | 3300031952 | Sediment | MNESEPPVRCRENVLSVKTAGSLTLGEECSGYLFTGYMADVIKEA |
| Ga0315292_114808951 | 3300032143 | Sediment | DQVRIEKMNESEPSMRCRENELSVKTTGTCTPGEECCGYLFTGYMADVIKEA |
| Ga0315283_121863482 | 3300032164 | Sediment | CRETILSVKTTGSLTLGEECGGYLFTGYMADVIKEA |
| Ga0315268_105024822 | 3300032173 | Sediment | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTDHMADGIKKA |
| Ga0315275_120638851 | 3300032401 | Sediment | MNESKPSMRCRETELSVKTTGSLTLGEECSGYLFTGYMADGIKKA |
| Ga0316604_103778641 | 3300033406 | Soil | VSEPPVRCRENVHSVKTTGSLTLGEECSGYLFTGYMADVIKGA |
| Ga0316604_103778642 | 3300033406 | Soil | MNVSEPPVRCRENVHSVKTTGSLTLGEECSGYLFTGYMADVIKG |
| Ga0316604_106564893 | 3300033406 | Soil | NESEPSMRCRETVLSVKTTGSLTLGEECGGYLFTGYMADGIKKA |
| Ga0326726_101344561 | 3300033433 | Peat Soil | MSCWKDKVRIEKMNESKPSMRCRETVLSVKTTGSLMLGEECGGYLSTGYMADGIKKA |
| Ga0316613_106807851 | 3300033434 | Soil | MDKVRIEKMNENEPLMKCRENAQSVKTTGLLTLGEECSGYLFTGYMADVIKEA |
| Ga0316624_109970241 | 3300033486 | Soil | MNESEPPVRCCENVHSVKTTGSLTLGEECSGYLLNGYKADR |
| Ga0316624_115548441 | 3300033486 | Soil | MNENEPLMKCRENTQSVKTTGLLTLGEECSGYLFTG |
| Ga0316624_120806951 | 3300033486 | Soil | MNESEPSRRCRENVLSVKTQRSMMPGEECSGHLVTGYMAD |
| Ga0314863_095108_232_360 | 3300033804 | Peatland | MNESEPSVRCRENAHSVKTTGSLLLEDECSGNLFTGYMADGI |
| Ga0370486_150836_308_415 | 3300034126 | Untreated Peat Soil | VKTVLSVKTTGSLILEEECGGYLFTGYMADVIKEA |
| Ga0370490_0036970_1473_1610 | 3300034128 | Untreated Peat Soil | MDESEPSMRCRETVLSVKTTGSSTLGDECGGYLFTGYMADGIKEA |
| Ga0370506_151259_109_216 | 3300034157 | Untreated Peat Soil | VKTVLSVKTTGSLMLGEECSGYLFTGYMADVIKKA |
| Ga0370495_0044315_1145_1282 | 3300034257 | Untreated Peat Soil | MNESEPSMRCRETVLSVKTTGSLMLGEECGGYLFTGYMAGGIKKA |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |