Metagenome / Metatranscriptome Family F052632

Basic Information
Family ID	F052632
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	47 residues
Representative Sequence	MLINGVNLMHHLNRCRLRLQKHMLEEKQLRSPNLLVQPKNSVEAI
Number of Associated Samples	130
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.30 %
% of genes from short scaffolds (< 2000 bps)	92.96 %
Associated GOLD sequencing projects	126
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (95.070 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater (20.422 % of family members)
Environment Ontology (ENVO)	Unclassified (57.042 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (84.507 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.42% β-sheet: 0.00% Coil/Unstructured: 46.58%
Feature Viewer

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Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00137	ATP-synt_C	54.23
PF02326	YMF19	21.83
PF00430	ATP-synt_B	18.31
PF01593	Amino_oxidase	2.11
PF05834	Lycopene_cycl	2.11
PF15461	BCD	0.70
PF00119	ATP-synt_A	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	54.23
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	40.14
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.07 %
Unclassified	root	N/A	4.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.07 %
Unclassified	root	N/A	4.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.07 %
Unclassified	root	N/A	4.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.37 %
Unclassified	root	N/A	4.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	93.66 %
Unclassified	root	N/A	4.93 %

Name	Rank	Taxonomy	Distribution
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	92.25 %
Unclassified	root	N/A	4.93 %

Name	Rank	Taxonomy	Distribution
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	92.25 %
Unclassified	root	N/A	4.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	91.55 %
Unclassified	root	N/A	4.93 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	51.41 %
Unclassified	root	N/A	4.93 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000251\|LPjun08P16500mDRAFT_1024151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	674	Open in IMG/M
3300001974\|GOS2246_10013277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1725	Open in IMG/M
3300002033\|GOS24894_10030900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1457	Open in IMG/M
3300002227\|M1t6FKB1101N_1446021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	863	Open in IMG/M
3300005432\|Ga0066845_10121547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	994	Open in IMG/M
3300005521\|Ga0066862_10298620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	522	Open in IMG/M
3300005934\|Ga0066377_10120710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	790	Open in IMG/M
3300005971\|Ga0066370_10313968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	562	Open in IMG/M
3300006351\|Ga0099953_1429252	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300006384\|Ga0075516_1003851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1148	Open in IMG/M
3300006393\|Ga0075517_1005117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	836	Open in IMG/M
3300006401\|Ga0075506_1027758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	654	Open in IMG/M
3300006419\|Ga0075496_1496735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	643	Open in IMG/M
3300007325\|Ga0079257_1378547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	717	Open in IMG/M
3300007552\|Ga0102818_1068573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	699	Open in IMG/M
3300007962\|Ga0102907_1001781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	7088	Open in IMG/M
3300009495\|Ga0115571_1237571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	735	Open in IMG/M
3300009593\|Ga0115011_11706935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	564	Open in IMG/M
3300009703\|Ga0114933_10060290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	2745	Open in IMG/M
3300009757\|Ga0123367_1163071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	829	Open in IMG/M
3300010883\|Ga0133547_10159127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	4883	Open in IMG/M
3300010883\|Ga0133547_11453815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1290	Open in IMG/M
3300011330\|Ga0138383_1142215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	609	Open in IMG/M
3300012408\|Ga0138265_1055343	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012415\|Ga0138263_1195105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	690	Open in IMG/M
3300012472\|Ga0129328_1048806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	980	Open in IMG/M
3300012528\|Ga0129352_11003783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1416	Open in IMG/M
3300012919\|Ga0160422_11011711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	538	Open in IMG/M
3300012954\|Ga0163111_12408190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	535	Open in IMG/M
3300012954\|Ga0163111_12639682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	513	Open in IMG/M
3300012969\|Ga0129332_1162755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1084	Open in IMG/M
3300016736\|Ga0182049_1287448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	531	Open in IMG/M
3300016743\|Ga0182083_1061988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	556	Open in IMG/M
3300016749\|Ga0182053_1154906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	536	Open in IMG/M
3300016751\|Ga0182062_1014286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	654	Open in IMG/M
3300016776\|Ga0182046_1514286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	573	Open in IMG/M
3300016781\|Ga0182063_1038317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	540	Open in IMG/M
3300017709\|Ga0181387_1021808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1246	Open in IMG/M
3300017717\|Ga0181404_1150431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	562	Open in IMG/M
3300017726\|Ga0181381_1089189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	657	Open in IMG/M
3300017732\|Ga0181415_1072983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	775	Open in IMG/M
3300017740\|Ga0181418_1158531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	542	Open in IMG/M
3300017744\|Ga0181397_1147143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	604	Open in IMG/M
3300017770\|Ga0187217_1288959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	529	Open in IMG/M
3300017781\|Ga0181423_1235328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	687	Open in IMG/M
3300017783\|Ga0181379_1070562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1308	Open in IMG/M
3300017783\|Ga0181379_1287554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	561	Open in IMG/M
3300017786\|Ga0181424_10053407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1749	Open in IMG/M
3300017786\|Ga0181424_10375420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300017824\|Ga0181552_10311469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	773	Open in IMG/M
3300018049\|Ga0181572_10894396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	525	Open in IMG/M
3300018410\|Ga0181561_10486910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	554	Open in IMG/M
3300018980\|Ga0192961_10168467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	664	Open in IMG/M
3300019073\|Ga0188855_1001291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	599	Open in IMG/M
3300019198\|Ga0180033_127492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	714	Open in IMG/M
3300019271\|Ga0182065_1082603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	528	Open in IMG/M
3300019271\|Ga0182065_1346952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	640	Open in IMG/M
3300019272\|Ga0182059_1418343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	530	Open in IMG/M
3300019281\|Ga0182077_1220662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	549	Open in IMG/M
3300019756\|Ga0194023_1041352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	930	Open in IMG/M
3300020191\|Ga0181604_10249989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	831	Open in IMG/M
3300020292\|Ga0211663_1072113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	506	Open in IMG/M
3300020358\|Ga0211689_1224081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	506	Open in IMG/M
3300020381\|Ga0211476_10041273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1922	Open in IMG/M
3300020401\|Ga0211617_10296106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	672	Open in IMG/M
3300020404\|Ga0211659_10159961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1021	Open in IMG/M
3300020405\|Ga0211496_10076397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1212	Open in IMG/M
3300020433\|Ga0211565_10138896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	1053	Open in IMG/M
3300020438\|Ga0211576_10244180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	945	Open in IMG/M
3300020442\|Ga0211559_10588174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	503	Open in IMG/M
3300020463\|Ga0211676_10010493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	7972	Open in IMG/M
3300020469\|Ga0211577_10313477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	991	Open in IMG/M
3300021291\|Ga0206694_1063188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	549	Open in IMG/M
3300021334\|Ga0206696_1013744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1425	Open in IMG/M
3300021371\|Ga0213863_10054931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2046	Open in IMG/M
(restricted) 3300022931\|Ga0233433_10373079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	566	Open in IMG/M
3300023549\|Ga0232116_101886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	621	Open in IMG/M
3300023568\|Ga0228696_1043904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	508	Open in IMG/M
3300023676\|Ga0232114_131779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	520	Open in IMG/M
3300023702\|Ga0232119_1063556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	552	Open in IMG/M
3300024292\|Ga0228630_1119985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	516	Open in IMG/M
3300024319\|Ga0228670_1096437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	597	Open in IMG/M
(restricted) 3300024336\|Ga0233447_1162150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	596	Open in IMG/M
3300024417\|Ga0228650_1173201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	551	Open in IMG/M
3300025602\|Ga0209361_1115389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	675	Open in IMG/M
3300025666\|Ga0209601_1140749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	680	Open in IMG/M
3300025680\|Ga0209306_1010798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	3493	Open in IMG/M
3300025690\|Ga0209505_1174975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	552	Open in IMG/M
3300025771\|Ga0208427_1071088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1243	Open in IMG/M
3300025809\|Ga0209199_1236058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	609	Open in IMG/M
3300025815\|Ga0208785_1035195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1503	Open in IMG/M
3300025830\|Ga0209832_1087709	Not Available	1010	Open in IMG/M
3300025897\|Ga0209425_10314614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	779	Open in IMG/M
3300026083\|Ga0208878_1068943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	893	Open in IMG/M
3300026258\|Ga0208130_1158513	Not Available	602	Open in IMG/M
3300026407\|Ga0247589_1068042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	534	Open in IMG/M
3300026418\|Ga0247564_1063094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	631	Open in IMG/M
3300026419\|Ga0247575_1078506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	628	Open in IMG/M
3300026423\|Ga0247580_1086562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	601	Open in IMG/M
3300026443\|Ga0247559_1093003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	632	Open in IMG/M
3300026447\|Ga0247607_1104647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	505	Open in IMG/M
3300026458\|Ga0247578_1115020	Not Available	532	Open in IMG/M
3300026460\|Ga0247604_1083705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	738	Open in IMG/M
3300026462\|Ga0247568_1022188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1194	Open in IMG/M
3300026468\|Ga0247603_1055181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	803	Open in IMG/M
3300026479\|Ga0228622_1062051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	834	Open in IMG/M
3300026513\|Ga0247590_1158755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	579	Open in IMG/M
3300027211\|Ga0208307_1054289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	600	Open in IMG/M
3300027250\|Ga0208310_1040982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	703	Open in IMG/M
3300027323\|Ga0209426_1079209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	569	Open in IMG/M
3300027779\|Ga0209709_10005089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	10434	Open in IMG/M
3300027779\|Ga0209709_10009747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	6983	Open in IMG/M
3300027813\|Ga0209090_10428596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300027839\|Ga0209403_10599449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	534	Open in IMG/M
3300027906\|Ga0209404_11133316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	537	Open in IMG/M
3300028106\|Ga0247596_1119162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	599	Open in IMG/M
3300028111\|Ga0233397_1104664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	705	Open in IMG/M
3300028133\|Ga0228609_1175031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	515	Open in IMG/M
3300028134\|Ga0256411_1240381	Not Available	560	Open in IMG/M
3300028173\|Ga0257118_1112319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	592	Open in IMG/M
3300028290\|Ga0247572_1083356	Not Available	782	Open in IMG/M
3300028290\|Ga0247572_1195958	Not Available	508	Open in IMG/M
3300028337\|Ga0247579_1072502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	696	Open in IMG/M
3300028338\|Ga0247567_1102977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	639	Open in IMG/M
3300028391\|Ga0233394_1092393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	639	Open in IMG/M
3300030728\|Ga0308136_1156941	Not Available	516	Open in IMG/M
3300031143\|Ga0308025_1038019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1881	Open in IMG/M
3300031598\|Ga0308019_10028823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2471	Open in IMG/M
3300031598\|Ga0308019_10390660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	502	Open in IMG/M
3300031599\|Ga0308007_10180470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	742	Open in IMG/M
3300031638\|Ga0302125_10250231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	538	Open in IMG/M
3300031659\|Ga0307986_10006318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	7732	Open in IMG/M
3300031659\|Ga0307986_10160478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1036	Open in IMG/M
3300031688\|Ga0308011_10163078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	674	Open in IMG/M
3300031696\|Ga0307995_1045358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	1858	Open in IMG/M
3300031773\|Ga0315332_10791457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	576	Open in IMG/M
3300031774\|Ga0315331_10651343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	749	Open in IMG/M
3300031774\|Ga0315331_11130859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	525	Open in IMG/M
3300032047\|Ga0315330_10543939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	696	Open in IMG/M
3300032073\|Ga0315315_10917889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	790	Open in IMG/M
3300032073\|Ga0315315_11737854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	532	Open in IMG/M
3300032073\|Ga0315315_11846965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	512	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	98.59%
Freshwater	Environmental → Aquatic → Freshwater	1.41%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	26.76%
Oceanic	Environmental → Aquatic → Marine → Oceanic	19.72%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	19.72%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.49%
Strait	Environmental → Aquatic → Marine → Strait	8.45%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.23%
Inlet	Environmental → Aquatic → Marine → Inlet	2.11%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.41%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.70%
River	Environmental → Aquatic → Freshwater → River	0.70%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	26.76%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	16.20%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.49%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	9.86%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.45%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.34%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.23%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	3.52%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	2.82%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.70%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.70%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.70%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	20.42%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	14.79%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	9.86%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	8.45%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.45%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.34%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	5.63%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.93%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	4.23%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	3.52%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.41%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.41%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.41%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.41%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	1.41%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.70%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.70%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.70%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	0.70%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.70%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.70%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.70%
Deep Oceanic, Basalt-Hosted Subsurface Hydrothermal Fluid	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Oceanic, Basalt-Hosted Subsurface Hydrothermal Fluid	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000251	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2008 P16 500m	Environmental	Open in IMG/M
3300001974	Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031	Environmental	Open in IMG/M
3300002033	Marine microbial communities from the Sargasso Sea - GS000a &b	Environmental	Open in IMG/M
3300002227	Marine microbial communities from the Baltic Sea - M1t6 FKB1 (101N)	Environmental	Open in IMG/M
3300005432	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78	Environmental	Open in IMG/M
3300005521	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300005971	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A	Environmental	Open in IMG/M
3300006351	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0045m	Environmental	Open in IMG/M
3300006384	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006393	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006401	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006419	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_>0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007325	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S9 Surf_B metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007552	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.571	Environmental	Open in IMG/M
3300007962	Estuarine microbial communities from the Columbia River estuary - metaG 1556B-02	Environmental	Open in IMG/M
3300009495	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009757	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_205_2m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010883	western Arctic Ocean co-assembly	Environmental	Open in IMG/M
3300011330	Marine microbial communities from the Southern Atlantic ocean - KN S17 Surf_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012408	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA23.A_192.20151118 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012415	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA15.ICE_1m.20151115 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012472	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012528	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300012969	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016736	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011508BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016743	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071413AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016749	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011512AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016751	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101408BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016776	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 011505AT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016781	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101409CT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017709	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27	Environmental	Open in IMG/M
3300017717	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017770	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017786	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018980	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_083 - TARA_N000001372 (ERX1782312-ERR1712127)	Environmental	Open in IMG/M
3300019073	Metatranscriptome of marine microbial communities from Baltic Sea - GS683_0p1	Environmental	Open in IMG/M
3300019198	Estuarine microbial communities from the Columbia River estuary - R8.48AS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019271	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101411XT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019272	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101405AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019281	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300020191	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041410US metaG (spades assembly)	Environmental	Open in IMG/M
3300020292	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555930-ERR599113)	Environmental	Open in IMG/M
3300020358	Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)	Environmental	Open in IMG/M
3300020381	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)	Environmental	Open in IMG/M
3300020401	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020405	Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)	Environmental	Open in IMG/M
3300020433	Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021291	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 100m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021334	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300022931 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_100_MG	Environmental	Open in IMG/M
3300023549	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 63R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023568	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 84R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023676	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 55R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023702	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 82R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024292	Seawater microbial communities from Monterey Bay, California, United States - 37D	Environmental	Open in IMG/M
3300024319	Seawater microbial communities from Monterey Bay, California, United States - 85D	Environmental	Open in IMG/M
3300024336 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_124_October2016_135_MG	Environmental	Open in IMG/M
3300024417	Seawater microbial communities from Monterey Bay, California, United States - 62D	Environmental	Open in IMG/M
3300025602	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_200m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025666	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 (SPAdes)	Environmental	Open in IMG/M
3300025680	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 (SPAdes)	Environmental	Open in IMG/M
3300025690	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331 (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025830	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110407 (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300026083	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026258	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78 (SPAdes)	Environmental	Open in IMG/M
3300026407	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 49R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026418	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 12R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026419	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 30R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026423	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 39R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026443	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 4R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026447	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 125R_r (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026458	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 36R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026460	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 85R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026462	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 17R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026468	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 79R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026479	Seawater microbial communities from Monterey Bay, California, United States - 26D	Environmental	Open in IMG/M
3300026513	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 51R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027211	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02 (SPAdes)	Environmental	Open in IMG/M
3300027250	Estuarine microbial communities from the Columbia River estuary - metaG 1557A-02 (SPAdes)	Environmental	Open in IMG/M
3300027323	Deep oceanic, basalt-hosted subsurface ecosystem from Juan de Fuca Ridge flank, Pacific Ocean, CORK Borehole 1362B_J2.571 (SPAdes)	Environmental	Open in IMG/M
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental	Open in IMG/M
3300027813	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152 (SPAdes)	Environmental	Open in IMG/M
3300027839	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300028106	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 66R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028111	Seawater microbial communities from Monterey Bay, California, United States - 35D	Environmental	Open in IMG/M
3300028133	Seawater microbial communities from Monterey Bay, California, United States - 10D	Environmental	Open in IMG/M
3300028134	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - WCR_12 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028173	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_150m	Environmental	Open in IMG/M
3300028290	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 25R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028337	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 38R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028338	Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 15R (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028391	Seawater microbial communities from Monterey Bay, California, United States - 24D	Environmental	Open in IMG/M
3300030728	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_940_32.3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031143	Marine microbial communities from water near the shore, Antarctic Ocean - #422	Environmental	Open in IMG/M
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental	Open in IMG/M
3300031599	Marine microbial communities from water near the shore, Antarctic Ocean - #71	Environmental	Open in IMG/M
3300031638	Marine microbial communities from Western Arctic Ocean, Canada - CB4_surface	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031688	Marine microbial communities from water near the shore, Antarctic Ocean - #177	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300032047	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052632

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPjun08P16500mDRAFT_10241513	3300000251	Marine	MLINGVNLMHHLNRCRLRLQKHMLGEKQLGSPNPL
GOS2246_100132775	3300001974	Marine	MHHLNRCTLILQKHKLEEKQLVSPNLLAQLKNLMVAILLLSKTNN
GOS24894_100309001	3300002033	Marine	MHHLNRCRLKLQKRMPEEKQLISPGQLKQPKNSVEA
M1t6FKB1101N_14460213	3300002227	Marine	MLINGVNLMHHLNRCRLRSQKRMLEEKQLRSPNLLMQPKNLVEAIHQLFQG
Ga0066845_101215473	3300005432	Marine	MLINGVSLMHHLSRCRLRLQKHMLEEKQLRSPSQLKQPKNSVE
Ga0066862_102986201	3300005521	Marine	MLINGVNLMHRLNKCMLRLQKHMLEEKQLRSPNQLKQPKNSVEAIHRLFQ
Ga0066377_101207101	3300005934	Marine	MLINGVSLMHHSNRCRLRLQKHMLEEKQLRSPNQLKQPKNSVEAI
Ga0066370_103139681	3300005971	Marine	MSSYVNGVNLMHHLNRCMLRLQKHMLGEKQLISPIQLVQPRNSVEAIHRLFQDLLQSLRKLSS
Ga0099953_14292521	3300006351	Marine	MINGVNLMHHLSKCMLKLQKHKLEEKQLRSPNQLMQQKMLKEAILQLSQGL
Ga0075516_10038514	3300006384	Aqueous	MLVNGVNLMHHLNRCRLRSQKRMLEEKQLRSPNLLMQPKNSV
Ga0075517_10051173	3300006393	Aqueous	MLVNGVNLMHHLNRCRLRSQKRMLEEKQLRSPNLLMQPKN
Ga0075506_10277583	3300006401	Aqueous	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLFQDLLQ
Ga0075496_14967351	3300006419	Aqueous	MLINGVNLMHHLNRCRLRLQKRMLEEKQLRSPNLLMQPKNLVEAIHQLFQG
Ga0079257_13785471	3300007325	Marine	MLINGVNLMHHLNKCMLRLQKHKLEEKQLRSPNPLVQPKNSVE
Ga0102818_10685733	3300007552	Estuarine	MLINGVNLMHHLNRCRLRLQKRMLEEKQLRSPNLLTQPKNSVE
Ga0102907_100178110	3300007962	Estuarine	MLINGVNLMHHLNRCRLRSQKHMLEEKQLGSPNLLMQPKNSVE
Ga0115571_12375711	3300009495	Pelagic Marine	MLINGVNLMHHLNRCRLRSQKRMLEEKQLRSPNLLMQPKNLVE
Ga0115011_117069351	3300009593	Marine	MLVNGVNLTHHLNRCMLRLQKHMLEEKQLRSPNLLKQPRNSVEAIH
Ga0114933_100602901	3300009703	Deep Subsurface	MLINGVNLMHHLNKCMLKLQTHMLEEKQLVSPNLL
Ga0123367_11630714	3300009757	Marine	MSSYVNGVDLMHHLNRYMLRLQKHMLEEKQPISPNQ
Ga0133547_101591271	3300010883	Marine	MLINGVNLMHHLNRCRLRLQKHMLEEKQLVFPNQLVQPKNSVE
Ga0133547_114538154	3300010883	Marine	MLVNGVNLMHHLNRCRLRLQKHMLEEKQPVFPNQLVQPKNS
Ga0138383_11422153	3300011330	Marine	MLINGVNLMHHLNRYMLRSRKHMLEEKQLISPNQLAQPKNSVEAIH
Ga0138265_10553431	3300012408	Polar Marine	MLVNGVNLMHHLNRCRLILQKHMLEEKQLRSPNQLKQPKNSVE
Ga0138263_11951051	3300012415	Polar Marine	MLVNGVNLMHHSNRCRLRLQKHMLEEKQLVFPNQLM
Ga0129328_10488061	3300012472	Aqueous	MLVNGVNLMHHSSRCRLRLQKHMLEEKQLVFPSQLMQPKNSVEAIH
Ga0129352_110037831	3300012528	Aqueous	MLINGVNLMHHSNRCMLRLQKHMLEEKQPRSPNQLKQPKNSVEAIHRLFQDLLQ
Ga0160422_110117111	3300012919	Seawater	MLINGVNLMHHLNRCRLRLQKHMLEEKQLVSPNQLKQPKN
Ga0163111_124081903	3300012954	Surface Seawater	MLVNGVNLMHHLNRCRLRLQKHMLEEKQLRSPNLLKQPKNLVE
Ga0163111_126396823	3300012954	Surface Seawater	MLVNGVNLMHHSNRYMLKLRKHMLEEKQLRSPSQLKQLKNSVEAI
Ga0129332_11627551	3300012969	Aqueous	MLINGVNLMHRLNRCRLRLQKHMLEEKQLVSPNQL
Ga0182049_12874483	3300016736	Salt Marsh	MLINGVNLMHRLNRCRLKLQKHMLEEKQLRSLSLLMQPKNSVEAIHQLFQDLLQ
Ga0182083_10619883	3300016743	Salt Marsh	MLINGVNLMHRLNRCRLKLQKHTLEEKQLRSPNLLMQPKNSVEAIHQLFQ
Ga0182053_11549061	3300016749	Salt Marsh	MLINGVNLMHRLNRCRLKLQKHTLEEKQLRSPNLLMQPKNSVEAIHQLFQD
Ga0182062_10142863	3300016751	Salt Marsh	MSSYVNGVNLMHHLNRYMLRLQKHMLEEKQLISPNQLVQPRNSVEAIHRLFQDLLQ
Ga0182046_15142863	3300016776	Salt Marsh	MLINGVNLMHRLNRCRLKLQKHMLEEKQLRSLSLLMQPKNSVEAIHQLFQD
Ga0182063_10383171	3300016781	Salt Marsh	MLINGVNLMHRLNRCRLKLQKHMLEEKQLRSLSLLMQPKNSVEAIHQLFQDLLQSLRKLS
Ga0181387_10218081	3300017709	Seawater	MLINGVNLMHHLNRCMLRLQKHMLEEKQLRSPNQLKQPKNSVEA
Ga0181404_11504313	3300017717	Seawater	MFVNGVSLMHRLNRCMLRSQKHMLEEKQLRSPNLLEQPKNSVEAIHRLFQDL
Ga0181381_10891891	3300017726	Seawater	MLINGVNLMHRLNRCRLRLQKHMLEEKQLVSPNQLAQPKNLV
Ga0181415_10729833	3300017732	Seawater	MLINGVNLMHRLNRCRLRLQKHMLEEKQLVSPNQLMQPKNLVEAIHQLSRGLLQS
Ga0181418_11585311	3300017740	Seawater	MLINGVNLMHRLNKCMLRLQKHMLEEKQLRSPNLLTQPKNSVEAIHQLFQDLSQSLRKLSSLY
Ga0181397_11471431	3300017744	Seawater	MLINGVNLMHRSNRCRLRLQKHMLEEKQLVSPNQLAQPKNLVEAIPQLYQDLLQSLQILS
Ga0187217_12889593	3300017770	Seawater	MLVNGVDLMHRLNRCRLVLQKHRPEERLLRSLSLLMLLK
Ga0181423_12353281	3300017781	Seawater	MLINGVNLMHHLNRCRLRLQKRMLEEKQLVSPNQLKQPKNLVEAIHQLFQG
Ga0181379_10705624	3300017783	Seawater	MLVNGVNLMHRLNKCMLRLQKHMLEEKQLRSPNQL
Ga0181379_12875541	3300017783	Seawater	MSSYVLINGVNLMHHLNKCMLRLQKHMLEEKQLRSPNPLKQPKNSVEAIHRLFQ
Ga0181424_100534071	3300017786	Seawater	MFVNGVNLMHHLNRCRLRLQKHMLEEKQLISPSQLMQ
Ga0181424_103754203	3300017786	Seawater	MINGVNLMHHLNKCMLRLQKHMVEEKQPGSPSLSMQPKNS
Ga0181552_103114691	3300017824	Salt Marsh	MLINGVSLMHHLSRCRLRLQKHMLEEKQPRSPNLLKQPKNSVEAIHRLFQGLSQSSRKLS
Ga0181572_108943961	3300018049	Salt Marsh	MLINGVDLKHHLNRCMLRLQKHTLEEKQLRSPNLLMQPKNSVEAIHLL
Ga0181561_104869103	3300018410	Salt Marsh	MLINGVNLMHRLNRCRLKLQKHMLEEKQLRSLSLLMQPKNSVEAIHQLFQDLLQSLRKLSSLCDLPS
Ga0192961_101684673	3300018980	Marine	MLVNGVNLMHRLNRCRLRLQKHMLEEKQPVFPNQLMQPKNSVEAIHQLFRDL
Ga0188855_10012913	3300019073	Freshwater Lake	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLTQPKNSVEAIHQLFQGLLQSLRKLSSLYDQPSCLQ
Ga0180033_1274923	3300019198	Estuarine	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLFQGLL
Ga0182065_10826033	3300019271	Salt Marsh	MLINGVNLMHRLNRCRLKLQKHMLEEKQLRSLSLLMQPKNSVEAIHQLFQDLL
Ga0182065_13469523	3300019271	Salt Marsh	MSSCVNGVNLMHHLNRCMLRLQKHMLEEKQPISPNQLVQPRNSVEAIHRLF
Ga0182059_14183433	3300019272	Salt Marsh	MLFNGVSLKHHLNRCMLRLQKHKLEEKQLRSPNQLTQPKNLVEATH
Ga0182077_12206623	3300019281	Salt Marsh	MSSYVNGVNLMHHLNRYMLKLQKHMLEEKQLISPNQLVQPRNSVEAIHRLFQDLL
Ga0194023_10413521	3300019756	Freshwater	MLINGVNLMHHLNRCMLKLQKHMLEEKQLRSPSQLMQPKN
Ga0181604_102499893	3300020191	Salt Marsh	MFINGVNLMHHLNICMLRLQKHMLEEKQLRSPNQLKQPKNSVEA
Ga0211663_10721131	3300020292	Marine	MLINGVNLMHHLNRCRLRLQKHKLEEKQLRSPNLLTQPKNLVEAIH
Ga0211689_12240813	3300020358	Marine	MLVNGVNLMHHLNRCRLRLQKHMLEEKQPVFPNQLVQPKNSVEAIHQL
Ga0211476_100412731	3300020381	Marine	MLINGVNLMHHLNKCMLKLQKHMLEEKQLRSPNQLMQPKNSVE
Ga0211617_102961061	3300020401	Marine	MSSYVNGVNLMHHLNRYMLKLQKHMLEEKQPISPNQLVQPRNSVEAIHRLFQDL
Ga0211659_101599611	3300020404	Marine	MHHLNRYMLRSQKHMLEEKQLRSPNQLMQPKNSVEA
Ga0211496_100763974	3300020405	Marine	MLVNGVNLMHHLNRYMLRLQKHKLEEKQLRSPNQLMQPKNSVEA
Ga0211565_101388964	3300020433	Marine	MLINGVNLMHHLNKCMLRLQKHKLEEKQLRSPNLSVQPKNS
Ga0211576_102441801	3300020438	Marine	MHHLNRCRLRLQKHKPEEKQLGSPDQLVQPKNSVE
Ga0211559_105881741	3300020442	Marine	MHHLNKCMLRLQKHMLEEKQLISPNQLAQPKNSVEA
Ga0211676_100104931	3300020463	Marine	MLINGVNLMHHSNKCMLKLQKHMLEEKQLRSPNQLMQ
Ga0211577_103134774	3300020469	Marine	MLINGVNLMHHLNRCRLRLQKRMLEEKQLVSPNQLKQPKN
Ga0206694_10631883	3300021291	Seawater	MLINGVNLMHHLNRCRLRLQKHMLEEKQLRSPNLLKQPKNSVEAIHRLFQGLLQSLRKLS
Ga0206696_10137444	3300021334	Seawater	MLINGVNLMHHLNRCMLRLQKHMLEEKQPVSPSQLKQPKNSVEAIHQLFRDLSQ
Ga0213863_100549311	3300021371	Seawater	MLINGVNLMHHLNRCMLKLQKHMLEEKQLRSPSQLMQPKFGCI
(restricted) Ga0233433_103730793	3300022931	Seawater	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLFQGLLQSLRKLS
Ga0232116_1018861	3300023549	Seawater	MLINGVNLMHHLNRCRLKLQKHTLEEKQLRSPNLLMQPKNSVEA
Ga0228696_10439043	3300023568	Seawater	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLFQDLLQSLRK
Ga0232114_1317793	3300023676	Seawater	MHRLNRCRLRLQKHMLEEKQLVFPNQLVQPKNSVEAIHQ
Ga0232119_10635563	3300023702	Seawater	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLFQGL
Ga0228630_11199851	3300024292	Seawater	MLVNGVNLMHHLNRCRLRSQKRMLEEKQLRSPNLLMQPKNLVEA
Ga0228670_10964373	3300024319	Seawater	MLINGVNLMHRSNRCRLRLRKHMLEEKQLVSPNQLAQPKNLVEAIHQLFQDLLQ
(restricted) Ga0233447_11621503	3300024336	Seawater	MLINGVNLMHRLNRCRLRLQKHMLEEKQLVSPNQLAQPKNLVE
Ga0228650_11732013	3300024417	Seawater	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPNQL
Ga0209361_11153891	3300025602	Marine	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLFQDL
Ga0209601_11407491	3300025666	Pelagic Marine	MLINGVSLMHHLNRCMLRLQKRMPEEKQLRSPSQL
Ga0209306_10107986	3300025680	Pelagic Marine	MLINGVNLMHHLNRCRLRSQKRMLEEKQLRSPNLLMQPKNLVEA
Ga0209505_11749753	3300025690	Pelagic Marine	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQL
Ga0208427_10710881	3300025771	Aqueous	MLVNGVNLMHRLSRCRLRLRKHMLEEKQLVFPSQLTQPKNSVEAIHQ
Ga0209199_12360583	3300025809	Pelagic Marine	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLFQGLLQ
Ga0208785_10351951	3300025815	Aqueous	MLVNGVNLMHRLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLFQDLLQS
Ga0209832_10877091	3300025830	Pelagic Marine	MLINGVSLMHHLNRCRLRLQKHMLEEKQLVSPNQLKQ
Ga0209425_103146143	3300025897	Pelagic Marine	MLVNGVDLMHRLNRCRLRLQKHKLGEKQLRSPNQLMQPKN
Ga0208878_10689431	3300026083	Marine	MLVNGVNLMHHLNRCMLILQKHMLEEKQLRSPNQSMQPKNSVE
Ga0208130_11585131	3300026258	Marine	MHHLNRCMLRLQKHMLEEKQLRSPNQLKQPKNSVEAI
Ga0247589_10680423	3300026407	Seawater	MLINGVNLMHRLNRCRLRLQKHMLEEKQLVSPNQLAQPKNSEAIHQLFQDLLQSLRKLSSLYD
Ga0247564_10630941	3300026418	Seawater	MLINGVNLMHHLNRCRLRLQKRMLEEKQLVSPNQLK
Ga0247575_10785063	3300026419	Seawater	MLVNGVNLRHRLSRCRLRLRKHMLEEKQLIFPSQLAQPKNSVEAIHQLF
Ga0247580_10865623	3300026423	Seawater	MLINGVNLMHHLNRCRLRLQKHMLEEKQLRSPNLLTQPKNLVEAIHQLFQ
Ga0247559_10930033	3300026443	Seawater	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLFQD
Ga0247607_11046473	3300026447	Seawater	MLINGVNLMHHLNRCRLKLQKHKLEEKQLRSPNLLMQPKNSVEAIHQLFQDLLQ
Ga0247578_11150203	3300026458	Seawater	MFVNGVSLMHRLNRCMLRSQKHMLEEKQLRSPNLLEQPKNSVEAIHRLFQDLLQ
Ga0247604_10837053	3300026460	Seawater	MLINGVNLMHRLNRCRLRLRKHMLEEKQLVSPNQLAQPKNLVEAIHQLFQDL
Ga0247568_10221885	3300026462	Seawater	MLVNGVNLMHHLKRCRLRLQKHMLEEKQLRSPNLLMQPKNSVEAI
Ga0247603_10551811	3300026468	Seawater	MLVNGVNLMHHLSRCRLRLQKHMLEEKQLIFPSQLAQPKNSVEAIHQL
Ga0228622_10620513	3300026479	Seawater	MLINGVNLMHRSNRCRLRLRKHMLEEKQLVSPNQLAQPKNLVEAIHQLFQDLLQSLRK
Ga0247590_11587551	3300026513	Seawater	MFVNGVSLMHRLNRCMLRSQKHMLEEKQLRSPNLLEQPKNSVEAIHR
Ga0208307_10542891	3300027211	Estuarine	MLVNGVNLMHHLNRCRLRLQKHMLEEKQLRSPNLLTQPKNSVEAIHQLSQDLLQSLRKL
Ga0208310_10409823	3300027250	Estuarine	MLINGVNLMHHLNRCRLRLQKRMLEEKQLRSPNLLMQPKNLVEAIHQ
Ga0209426_10792091	3300027323	Deep Oceanic, Basalt-Hosted Subsurface Hydrothermal Fluid	MLINGVNLMHHLNRCRLKLQKHMLEEKQLRSPNLLMQPKNLVEAIHQLFQDLSQSLRKLSSLYD
Ga0209709_100050891	3300027779	Marine	MLVNGVNLMHRLNRCRLRLQKHMLEEKQPVFPNQLVQPK
Ga0209709_100097471	3300027779	Marine	MLVNGVDLMHHLNRCRLRLQRHMLEEKQLRSPNLLVQPKNSAEAIHQLF
Ga0209090_104285963	3300027813	Marine	MHHLNRCRLILQKHKPEETQLGSPNQLMLLKNQVA
Ga0209403_105994491	3300027839	Marine	MLVNGVGSMHHLNRCRLRLQKHMLEEKQLRSPNQLKQPKNLVEA
Ga0209404_111333161	3300027906	Marine	MLVNGVNLTHHLNRCMLRLQKHMLEEKQLRSPNLLKQPRNSVEAIHRLFQ
Ga0247596_11191621	3300028106	Seawater	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLFQ
Ga0233397_11046643	3300028111	Seawater	MLVNGVNLMHHLSRCRLRLRKRMLEEKQLVFPSQLMQPKNSVE
Ga0228609_11750311	3300028133	Seawater	MLINGVNLMHNLNRCRLRLQKRMLEEKQLVSQNQLKQ
Ga0256411_12403812	3300028134	Seawater	MLINGVSLMHHLNRCRLILQKHTLEEKQLRSPNQLKQLRNSAEAIHRLFRDLSQS
Ga0257118_11123191	3300028173	Marine	MLINGVNLMHHLNRCRLRLQKHMLEEKQLRSPNLLVQPKNSVEAI
Ga0247572_10833561	3300028290	Seawater	MLINGVNLMHHLNRYMLRLRKHMLEEKQPRSPSLLVQPKNSVEAIHRLFQ
Ga0247572_11959581	3300028290	Seawater	IPLYPPMLINGVNLMHHLNRCRLRSQKHMLEEKQLRSPNLLEQPKNSVEAIHRLFQDLLQSLRKLSS
Ga0247579_10725021	3300028337	Seawater	MLINGVNLMHRSNRCRLRLRKHMLEEKQLVSPNQLAQPKNLVEAIHQLFQDLL
Ga0247567_11029773	3300028338	Seawater	MLVNGVNLMHHLNRCRLRLQKHMLVEKQLVSLSQLMQPKSSVEAIHQLFRGLL
Ga0233394_10923931	3300028391	Seawater	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLIFPSQLAQPKNSVEAIHQLFQGLL
Ga0308136_11569413	3300030728	Marine	MLVNGVNLMHRLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVE
Ga0308025_10380191	3300031143	Marine	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQL
Ga0308019_100288235	3300031598	Marine	MLVNGVNLMHRLNRCRLRLQKHMLEEKQPVFPNQL
Ga0308019_103906601	3300031598	Marine	MLVNGVDLMHHLNRCRLKLQKHKLEEKQPVFPNQLVQPKNSVEAIHQLFRGLLQSHRK
Ga0308007_101804701	3300031599	Marine	MLVNGVNLMHRLNRCKLRSQKHMPEEKQPVFPNQLMQPKSLV
Ga0302125_102502311	3300031638	Marine	MLVNGVNLMHRLNRCRLRLQKHMLEEKQPVFPNQLVQPKNSVEAIHQLFRGLLQNHR
Ga0307986_1000631810	3300031659	Marine	MLVNGVNLMHRLNRCRLRLQKHMLEEKQPVFPNQLVQPKNSV
Ga0307986_101604781	3300031659	Marine	MFVNGVNLMHRLNRCRLRLQKHMLEEKQLVFPNQL
Ga0308011_101630783	3300031688	Marine	MLVNGVNLMHHLSRCRLRLRKHMLEEKQLVFPSQLMQPKNSVEAIHQLSRGLLQSH
Ga0307995_10453585	3300031696	Marine	MLVNGVNLMHRSNRCMLRLQKHMLEEKQPVFPNQLMQPKNSVEAIHQLFRGLL
Ga0315332_107914571	3300031773	Seawater	MLVNGVNLMHHLNRCRLRLQKHMLEEKQLVFPNQLVQPKNSVEAIHQLFRDLLQSLRKLS
Ga0315331_106513433	3300031774	Seawater	MLVNGVDLMHHLNRCRLRLQKHMLEEKQLRSPNQLMQPKSLVEAFH
Ga0315331_111308593	3300031774	Seawater	MFVNGVSLMHRLNRCMLRLQKHMLEEKQLISPNLLEQPKNSVEAIHRLFQDLLQSLRKL
Ga0315330_105439391	3300032047	Seawater	MLVNGVNLMHRLSRCRLRLQKHMLEEKQPVFPNQLAQPKNLVEAIHQLSQGLLQSL
Ga0315315_109178891	3300032073	Seawater	MLVNGVNLMHRSNRCMLKLQKHMLEEKQLRSPSQLVQQKN
Ga0315315_117378541	3300032073	Seawater	MLINGVNLMHHLNRCRLRLQKHMLEEKQLISPNRLMQPKNLV
Ga0315315_118469651	3300032073	Seawater	MHRLSRCRLRLQKHMLEEKQPVFPNQLVQPKNSVE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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