Sample 3300031827

Basic Information
IMG/M Taxon OID	3300031827 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0128948 \| Gp0290750 \| Ga0247532
Sample Name	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLI4 (Metagenome Metatranscriptome)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLI4 (Metagenome Metatranscriptome)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	9850419
Sequencing Scaffolds	47
Novel Protein Genes	47
Associated Families	44

Dataset Contents

Total Genome Size

9850419

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	37
All Organisms → Viruses → Riboviria	1
All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola	1
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2
All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1
All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia maris → Gimesia maris DSM 8797	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → Viruses → Riboviria

All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium

All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium

All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium

All Organisms → cellular organisms → Bacteria → Acidobacteria

All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria

All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia maris → Gimesia maris DSM 8797

Ecosystem Assignment (GOLD)
Name	Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Ecosystem Assignment (GOLD)

Name

Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Type

Environmental

Taxonomy

Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil → Soil, Plant Litter And Rhizosphere Microbial Communities From European Coniferous Forests

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	forest biome → litter layer → plant litter
Earth Microbiome Project Ontology (EMPO)	Unclassified

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

forest biome → litter layer → plant litter

Earth Microbiome Project Ontology (EMPO)

Unclassified

Location Information
Location	Czech Republic: South Bohemian Region
Coordinates	Lat. (^o)	49.0427	Long. (^o)	13.6161	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Location Information

Location

Czech Republic: South Bohemian Region

Coordinates

Lat. (^o)

49.0427

Long. (^o)

13.6161

Alt. (m)

N/A

Depth (m)

N/A

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F001380	Metagenome / Metatranscriptome	709	Y
F002636	Metagenome / Metatranscriptome	541	Y
F003050	Metagenome / Metatranscriptome	510	Y
F003269	Metagenome / Metatranscriptome	496	Y
F005081	Metagenome / Metatranscriptome	412	Y
F009606	Metagenome / Metatranscriptome	315	Y
F009934	Metagenome / Metatranscriptome	311	Y
F010157	Metagenome / Metatranscriptome	307	Y
F011395	Metagenome / Metatranscriptome	291	Y
F012024	Metagenome / Metatranscriptome	284	Y
F012750	Metagenome / Metatranscriptome	277	Y
F015690	Metagenome / Metatranscriptome	252	Y
F016972	Metagenome / Metatranscriptome	243	Y
F021919	Metagenome / Metatranscriptome	216	Y
F022127	Metagenome / Metatranscriptome	215	N
F025284	Metagenome / Metatranscriptome	202	Y
F025750	Metagenome / Metatranscriptome	200	Y
F026569	Metagenome / Metatranscriptome	197	Y
F028056	Metagenome / Metatranscriptome	192	Y
F030305	Metagenome / Metatranscriptome	185	N
F030627	Metagenome / Metatranscriptome	184	Y
F031875	Metagenome / Metatranscriptome	181	N
F033058	Metagenome / Metatranscriptome	178	Y
F035601	Metagenome / Metatranscriptome	171	Y
F035908	Metagenome / Metatranscriptome	171	Y
F037019	Metagenome / Metatranscriptome	168	Y
F040634	Metagenome / Metatranscriptome	161	N
F042677	Metagenome / Metatranscriptome	157	Y
F050386	Metagenome / Metatranscriptome	145	Y
F051372	Metagenome / Metatranscriptome	144	Y
F057620	Metagenome / Metatranscriptome	136	Y
F060406	Metagenome / Metatranscriptome	133	N
F062292	Metagenome / Metatranscriptome	131	Y
F062493	Metagenome / Metatranscriptome	130	Y
F066368	Metagenome / Metatranscriptome	126	Y
F068861	Metagenome / Metatranscriptome	124	Y
F074242	Metagenome / Metatranscriptome	119	N
F079408	Metagenome / Metatranscriptome	115	N
F085182	Metagenome / Metatranscriptome	111	Y
F089697	Metagenome / Metatranscriptome	108	N
F093122	Metagenome / Metatranscriptome	106	Y
F097470	Metagenome / Metatranscriptome	104	Y
F098181	Metagenome / Metatranscriptome	104	N
F098815	Metagenome / Metatranscriptome	103	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0247532_100491	Not Available	1153	Open in IMG/M
Ga0247532_100493	All Organisms → Viruses → Riboviria	1151	Open in IMG/M
Ga0247532_100571	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Alismatales → Araceae → Pothoideae → Potheae → Anthurium → Anthurium amnicola	1090	Open in IMG/M
Ga0247532_100752	Not Available	990	Open in IMG/M
Ga0247532_100988	Not Available	894	Open in IMG/M
Ga0247532_101063	Not Available	868	Open in IMG/M
Ga0247532_101110	Not Available	857	Open in IMG/M
Ga0247532_101314	Not Available	818	Open in IMG/M
Ga0247532_101447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	793	Open in IMG/M
Ga0247532_101593	Not Available	766	Open in IMG/M
Ga0247532_101638	Not Available	761	Open in IMG/M
Ga0247532_101872	Not Available	726	Open in IMG/M
Ga0247532_101930	Not Available	718	Open in IMG/M
Ga0247532_102071	Not Available	700	Open in IMG/M
Ga0247532_102213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	682	Open in IMG/M
Ga0247532_102337	Not Available	670	Open in IMG/M
Ga0247532_102403	Not Available	664	Open in IMG/M
Ga0247532_102603	Not Available	644	Open in IMG/M
Ga0247532_102638	Not Available	641	Open in IMG/M
Ga0247532_102641	Not Available	641	Open in IMG/M
Ga0247532_102690	Not Available	636	Open in IMG/M
Ga0247532_103067	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	603	Open in IMG/M
Ga0247532_103108	Not Available	600	Open in IMG/M
Ga0247532_103193	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
Ga0247532_103361	Not Available	585	Open in IMG/M
Ga0247532_103378	Not Available	584	Open in IMG/M
Ga0247532_103458	Not Available	580	Open in IMG/M
Ga0247532_103469	Not Available	580	Open in IMG/M
Ga0247532_103513	Not Available	578	Open in IMG/M
Ga0247532_103574	Not Available	575	Open in IMG/M
Ga0247532_103641	Not Available	571	Open in IMG/M
Ga0247532_103650	Not Available	571	Open in IMG/M
Ga0247532_103844	Not Available	561	Open in IMG/M
Ga0247532_103895	Not Available	558	Open in IMG/M
Ga0247532_103976	Not Available	554	Open in IMG/M
Ga0247532_103986	Not Available	554	Open in IMG/M
Ga0247532_104069	Not Available	549	Open in IMG/M
Ga0247532_104076	Not Available	548	Open in IMG/M
Ga0247532_104108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
Ga0247532_104298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
Ga0247532_104368	Not Available	534	Open in IMG/M
Ga0247532_104429	Not Available	532	Open in IMG/M
Ga0247532_104492	Not Available	530	Open in IMG/M
Ga0247532_104627	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → Gimesia → Gimesia maris → Gimesia maris DSM 8797	523	Open in IMG/M
Ga0247532_104731	Not Available	519	Open in IMG/M
Ga0247532_104784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	517	Open in IMG/M
Ga0247532_105242	Not Available	500	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0247532_100491	Ga0247532_1004911	F074242	VLGGGGRRSSLQPPAFIPTLSLSHKFRYENGGNSGTFNITRGNLLNQILIATSTTTTVRIIQAIRLKSVEVWGSPPALGSAPTDIQVEWLGENSPSTVVSDTSMGIRPSHVATSPPPSSSNKWWSISGTSEGDVLFSITLPTESVIDVNCELRLVEKEAPIAGDAAVAATLGQVYGDYLDGIASGKLVPSGFTFLP
Ga0247532_100493	Ga0247532_1004932	F035601	MEAKVIRHNNLWTATFLSRFFIPHAGSKHLTVPILGKALGRFNMRANKNQAVSDDLYMACKSVGYAYEFRYLPVIRDIFLERFKHHFPLAVAKNLKGDYDVEVSWNARAAGVTLRNITQKIKVSEVLCEYDFNAFCLERYSLLAIDVIDLFKQVVLSTELIDIEGVVVSKLAKDFL
Ga0247532_100571	Ga0247532_1005711	F015690	VVRKFGDEPFVDIWGNAGRHKRFGRVGAKVVGSRVVPHDWFRNRGMEESVEDITDFTRGRGHMRYRLFLSTHGLYYMTLDDVACWLGGNPDAEFHAIVHRHDKSHGRLNKGELKYTVDSHGQVVQTNPLTGFSYAHKTLEPLFHTDSCRLFGGKVGLAWDINKLVGDTYHIKFVLCHPGNANNVLDPWSMIKTDREVYARGDVTVYRCLSFSWYVYDGAGGEVLLEDVALFDRLRRTVAGKERTPRAKADLMAMCRRLSNKNDIISVHQGFAHEVPPELMTDYVNAAFYADVKHELEVALKYHRENKKAVDALNKFIVEGHVPPDFTYVAQVGRAVAKPFNSLYGFINDRTPIVPDSFVASA
Ga0247532_100752	Ga0247532_1007521	F025284	SGPRGRDQIIAHPPQLPSYGITRDVRLRYQALAATGQAITFQNLLDTILVATGGTTAADLFEGVRVNSVEMWAIAALGTPATLVLVYDGTTVGAMGDQKTHTDTSMGIEPAHVKAGPDRLTQAGQFQPSSANTAFRIDVPAGTVIDVSLTLRQPVLGQVVSSQNGLVGATAGTVYYRGLDGKTTALTNFPVLGADSVI
Ga0247532_100988	Ga0247532_1009881	F030305	MPLQFIGSCIVPFGFLVPVPSFLFPALSDLARRCGSGRPVPRVSDRTGDEASSCPDSSVFSAVPADGSSSRPDSRILQLGYPQIARLPRLSTSCLAVDERPGCPDRSIIWLYRRRRSRVAPNLTSFGGTVSNSPSRPGSSLLQPLPLMVLRVAPGAPSSGFAGGDSSGCPEALIPRLCRLVALRVSPNLPPSDICRFRSSGLPQIGFLGGSMMNPRFARTLHPRSIQLTSLQVAPKLPLPAAPRMNLQTHSGLAFLPTLRCSLNLYPLFACRRTGLLRTTINQFPIACRAGLQSVSL
Ga0247532_101063	Ga0247532_1010631	F089697	GVSILITRSTVGAASSGYPSGRPPAFAGAATIGCAGFQNSDLRRGPALQLDRWPTFRLGSASCPSARPAANLRLASTVPLFRSSFGDPSGLRLTILVSPGLRPTILVPSGLRRMALPPARPTTYLRFASMPSFDSAGGFIRLAPYAAPAPRLAPLPVCTGCFTLRLDRP
Ga0247532_101110	Ga0247532_1011101	F009606	YIMSSAKNTGNNEAGRGANVVRTKAKPKVNPVTGGNFEYVSEPRIGDSYVVVVAGPGGVQSFTFHHPIGLTDVDSEDWVCTPTADIQSLLARKEDPDERDRKSKRDRYRLELAVQAKLLEKRDSDGLLVYPNSGTNRQDALAAARTAAKDAVKAEKGKPSPDLYIRFLEQNVQGPESKVRKFLADPETIKRAETKFPSSGYRTRSGPLADRDQVEVEYLIGLSRPQAMDATTKRIFGLGGDDE
Ga0247532_101314	Ga0247532_1013142	F098181	LRSHRSGIAPCSTLGFACFPRIAPCSAFSARRRSPILLGVQRLAPCASCGLLRTQRLAPVLVTDHSVPRIAPCSALETPPRIWIAPYTTLSLHASLLDYSTLAAFCSTSPHGSLRKLRLALCAGLRITPYANTCCPCSVHGLLRVPL
Ga0247532_101447	Ga0247532_1014471	F009934	MDGPATRPVTPLAVENGVGKPATPAGVPNAGMGKRAWRTPI
Ga0247532_101593	Ga0247532_1015931	F050386	GPRKSYQWKRISEVHKLMVDIQTAHAKLGSQDGNSREHEIKVPNDY
Ga0247532_101638	Ga0247532_1016381	F025284	MISHPPQIPSYGITRDVRMRFQATAAASLAFTFQNLLDTILVATGATTAADLFEAVRLNSLEIWAIAAVGTPATITAIFDGTVVGAQGDQKTHTDTSMGVQPAHVKARPDPLTQTGQFQVSNANTAFRLDVPAGAVIDVSMSLRQPVLGQVVASQNLLVGATAGTVYYRGLDGKTTALTNFPVVGADSV
Ga0247532_101872	Ga0247532_1018721	F031875	VLMRSSNLSPFGDCDSSVLETCPDYLTQLAAVSNRDSLRDPSFAFDDVRTPPEESVNSASPNFRSVQRSRGNQPAPAFPRSPGIILKRSFLILLSTTV
Ga0247532_101930	Ga0247532_1019301	F003269	LTWFAGRWRNHQLKRAEKPHSKAVHRKMTDGPATRPKTPLAVENSVGKPAAPEKGA
Ga0247532_102071	Ga0247532_1020711	F074242	TMGLSHKFRYENAGNNGTFNITRGNLLNQVLVATSTTTTTRIFEAVRLKSVEVWGSPVALGSAPINCQIEWLGENSPSTVISDVSMGVRPSHVASAPPSSSSNRWWSISGTSEADVVFAMTIPSESVIDVTVELRLVEQEAPTAGDPAVGATLGQVYGDYLDGIASGKLVPVGFTVLP
Ga0247532_102213	Ga0247532_1022131	F062292	VRLLWSLPKAAPALLRHLAAYVDLASLDFARSQREIAAELLAAAVVGICAMFAVLMGCLAVVAYTW
Ga0247532_102337	Ga0247532_1023371	F042677	PAHAKGAKALISSNTGGSGPGPLLSTYFDLGYYGSGTDGTVRLDNVSGQNACAFIYVFDTDQELQEACAVGLSPNKDFNFATTNLVYNPFFAGAFNYGLDGIIEIISGTPNTGSSVFSSSNEGINCDPAAAITPLTAVNAWISTVTIAAIDGYWIPSATVLPFTDDGNPDATNLGVIQNALAVLGSEIGASGKGICTTDPWLVPDTNSGAVN
Ga0247532_102403	Ga0247532_1024031	F026569	MHGTEHRVPERRALRLSAPRKPVYPASASSLPSAPQPLILSKTGPFARNGLSLTREGLRLREFRPGVEGPGLPLRSLACRSSCPFGFSAPPPVAGSPQRPAASTPQARCIPYRPALPAVLPACAPLWEFSLPWDQRTGKLRNRPVRLPELPDLVRSPQPFHLKIRLRINVPDPLHFQRLAVPSPRIRWSSGKGVKSSETKKCVV
Ga0247532_102603	Ga0247532_1026031	F005081	MADCTILTITSDAQFLKLLRKELHDQVGGGNPMIVASTIDEACSLLPMAHPRLIVVHWNRQGGRSEELNRLLWATTVLARGVPVLVIADRYRVDQATTFYRMGVTEYISRTHHEDQFGRILDTYLRHRPAARPPEAASPDDPIQSVKAWSAPTQPLKAYVV
Ga0247532_102638	Ga0247532_1026381	F066368	PRFNRWLRHRPTNQVKTRLRFLSRLNRLAPGQPLLLAARSPETTGLASSLIDCFFSQSSGAVFNIAGLRKFVHPACPAIVSFPLQVLFLVRFSAFSFGELNFYFESCRDAHTVLIRSSNQSLFWQLRFIQARNLPELLHSNRSGFSSLLTADPPFAFGARERTRGTGEFCLRCLPFGRFLEEPGQST
Ga0247532_102641	Ga0247532_1026411	F016972	VRLTPLTDEIPVVNLYLTINGSYRGSFGAKTSRYGPYELGYRRATKTFTK
Ga0247532_102690	Ga0247532_1026901	F033058	LTWFASRWRNHQPKRAEKPHSIIRDRKAPDGPATRPKTPLAVENGVGKPAASERSALNVGAGKRVWRTP
Ga0247532_103067	Ga0247532_1030672	F057620	DHSTAERLRTLLVKDGFPTDRVELTSSQELGQAKLVPRDTVGEKLAEYFRTLFQHAGIHGDERAVQLFSRAVLDGKAALAVHPRGDIETDRALEILNQGGPLELREADLENQTFEHAAAHEETELTWIGKVLAGPGAPDTTGTARLP
Ga0247532_103108	Ga0247532_1031081	F025750	MEKADAHRSIDPWPAKTGGGEQRAHVTPSSDAKFRPCMPVGERADRRVTWNN
Ga0247532_103193	Ga0247532_1031931	F097470	QTEANQYYATLVKICDGGSSTRPELSHARELLAKK
Ga0247532_103361	Ga0247532_1033611	F010157	RGEAVRDQESKSAPKESSSKGKDKPRKDVSEAKLRLQNRLPALDDDADVGVQKEHVVTRDGKADLAFTGALIASAASPSAPKGEWKEYRIYETNGGKRVFSKITQKVFVGEQDIHEAEVFDPSPSSVSSQLLRGARDLTRSRPLTWTDAAVAFFGYDPLAKTLYRKVGPQFEEHIG
Ga0247532_103378	Ga0247532_1033781	F012750	LQARERPLRKTGSIEETDCGGPEGVDPEGEKSNLGERNGETLSATQCSAQYRACRWRARLEIGSLG
Ga0247532_103458	Ga0247532_1034581	F030627	PRSESRLRGVGRYAVSDRFCGDLLPARARLGPLSVRHFLRIASGRRFCCGSFRRSNHPTGWHGGFPAGRPWDFAAERRKIAPTDKGWRSLPALPFPGPAPRIGLASSAVTGSIDLPWVQCTGVEGLSPRDPGTSLAATLTPIAHPAFWRRLVRGGLVAGRRLPPCPRLIASHGLL
Ga0247532_103469	Ga0247532_1034691	F011395	MAAWKRAVFSGERKAVARCRFQPERTQATSKALIRSSQKGRRGAEELPPVIWLQSSEPCMPASGQAELRITWN
Ga0247532_103513	Ga0247532_1035131	F062493	VCRKALIPGQRNRPRGSGTAKHPELLNAVFYAEHAGREQGWELDHL
Ga0247532_103574	Ga0247532_1035741	F021919	VTRSRSQTPRRHATAQSFAPRIAGRRPFDSPPLSFELDGSMSPGSPASFPGWNRHLEAAFHSPETTARLQATISRSKLPTCSFDTLPFVRPARSDSDSLTRSGSPRNAQDHYRNPVARLPSGTPGPSSDLHSPLGPFGPLRIKAFNPIPGRKVHLPSAPDCPSLPGIDSILLVPIPDHRSRLAKHSVVCCS
Ga0247532_103641	Ga0247532_1036411	F062493	VCRKASIPGQRNRPRGSGTARHPELLNAMFYAEHAGRGLGWDL
Ga0247532_103650	Ga0247532_1036501	F001380	PGFTVRFSDPSACRRSLCNRMFRIKSLSLSIAAFQPATGHSNKHVIIGLSIPPEPESRYGLSLAHNDAFATIARSTFLACTFVSISKTLANSFDSQLLRSGRFRGRTGATSTPGTRFPLLPSTLRIHRRSPLPFGSSLKNPSDQSVRSLPNSEARLTRRPMVSYSPPFPLTIPPRISA
Ga0247532_103844	Ga0247532_1038441	F098815	LALPAGMRGQSLACSVVVTLPSCSPLRLLSRLGSVRQSPFAFLPARSHRLGTAFRSPATTVLFREPPWRGQRSWPIPSALIPNSFSSPFGLGLPPSATFFTSPGAFRAQNPLPYSKLETLKRPSNFRSPPGLSSLGIEALGQRLSLRSLPLCPARFPFAPR
Ga0247532_103895	Ga0247532_1038951	F028056	TARLSEPPACSALDPQPDTPDSTSAARRRRFSARAGSVQQTFPQRTCIRPEPETRNGLSLARNDAFATITRSTFLACPFESTYKLCADPFHRRLSTRFGFEAATGRIHHPRPVIHASLTRSHDATPSPLPFGPFRPSGSKRSTGFITRSSPCRTPDLPLTPRRAFFRLRCGSMFKTPLRPAWLSF
Ga0247532_103976	Ga0247532_1039761	F012024	ITGMHGTEHRVSERRALRLLAPRQPVYPASASTLPDAPQPLILSKTGPFARNGLSLTRVTSAYADPIPGSKVLACHFAHSLAGLPTRSALRLRRQSLVCPSFRLHPRLKPVVFFTGLLCRLCRLLPLPFRSFRSLRIKASTGFATVRSTFRNRPISVRSPQPFHLKIWLRIIVPDPLHFRRLAV
Ga0247532_103986	Ga0247532_1039861	F040634	MHGTEHRISDCRAYSPQAPRLLAYPASASSPLDAPQLIFPKRDRSLVAAFPSPRTPSACADSTLRSMVLACHFAHLLAVRPARSTFRLPRQGLVGPSFRRHPRLKPLAFCAGPLCRLCRQIPLPFRSFRSLRIKALPGFATVRSAFRNCPIFVRSPQSFLLKFGCGS
Ga0247532_104069	Ga0247532_1040691	F022127	APQNINMRVVFLLAILVVAVLSQTPVKPVWPKAASATIFADGWDERREERHLLRWFYDEVAGKERVEGPRRFLDETYWTVTIFDTVAKKQWFVIYQGSLATCYVGSLNQSLPHPNFDNFRFVGKAEINYNVVNHWIERGPDRDIANIYNRVDNNEVVRIDFDDRITHRAVSFHFLEIDDGSQ
Ga0247532_104076	Ga0247532_1040761	F068861	MPSITANRLIAEYGSDQDYKFAGAVQVKTATTLTTTFGSVMRYEPWTNTGARELLKHHPIGVWKELSVRLAPRPGIYGRMCTFYGGWAAAGVVTPTTAEEMVALHGAIDVTYGGTGDPGTVKVQIPCEFDDTIKDLLKGPDNDNSRPVFFYAFTETDVVDKP
Ga0247532_104108	Ga0247532_1041081	F002636	GERPVRVSAGAPGSRLPAEGEIRPCEAECRKPLKERGARKRAATLSERCSLVTFSAERCLGGPSRSYHGEGNRQHSAEPDGMLDLSGVVGGGTFPKKNTEQERPYPAAMSGKDRAYKVGRLKVRGAGRESEGFVVPAKACNTTRRREGTLL
Ga0247532_104298	Ga0247532_1042981	F035908	PEPHLLGGPPSKLRFGLLLRNWHDGALCASREAAVKLSRILTYAAIAFVIWWVIQQPTSAAHLVHNIGSLLSEAAHGLSSFVASI
Ga0247532_104368	Ga0247532_1043681	F079408	MPVRPFGSAPGIGLPQLPKFPRLRPVAFTTGELIRLPSPSPLPFRNFRSLGIKAFNGRSRRPVRLPNSPDIRSLPVAFLFLVYG
Ga0247532_104429	Ga0247532_1044291	F037019	HRMGLFHRLAPAKYSGIEPILQATCSRTWARLGSLSMSRQGAASSHRRFDRDCFRRDRSPNGVAWRFPDWTAVGLAFPSPFLGSAPLGIPLPEHSRLFGLDLSGVGRLSLRDRQITGGDSNPDCQFGVFAPDVSGGLIAGRRLSPCPHLFASHGLSLSESRSQLSGAFSYFAGSLS
Ga0247532_104492	Ga0247532_1044922	F093122	MRSHMKAALILSCLPLFFAATAQGGEGVAIKITNDGTEVIVVTVYDMSASPGRMVLANARINGFSSVPISVVADASGRVHLRWTATGTDPAFPRCGHAHTTVGNADSVNVHADSTCRV
Ga0247532_104627	Ga0247532_1046271	F085182	GAMIAGALRFLLQSRETCFDAHIEGHATEESPDSKGRDGG
Ga0247532_104731	Ga0247532_1047311	F060406	GELNSTTGCRVLRLPQRPTSRFRLRSRPLAALAPNLRLASPASHSSSTGGRLRRLGSTFCRSARTVANLRLSPALRASVRPLADLPTFVGVLPQARPRTNFRFAPDFDPSTRLVSNFRFAPVVVATSACAFCCCGLWLAPVPPVCQTGGELPTRIGCSSSGFTGFDSLGLRLV
Ga0247532_104784	Ga0247532_1047842	F051372	VRLLWSLPKAAPALLRHLAAYMDLASLDMARSQREIAAEL
Ga0247532_105242	Ga0247532_1052421	F003050	MESVKAGAVAGEGKAVTSGRFSFGKISCGASESVEAVTAKSVAGEQTGKAHGAPERDAQYGCMPVVSKA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300031827: Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLI4 (Metagenome Metatranscriptome)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences