Metagenome / Metatranscriptome Family F093122

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F093122
Family Type	Metagenome / Metatranscriptome
Number of Sequences	106
Average Sequence Length	117 residues
Representative Sequence	MRSQRKAMLILSCLPLLLAGTALGDEGVTVKITNDGTEDIVVTVYDMNTSPQRMVLTNARINGFTSVPISLVGDASGRANLTWTATSTDPVSPKCGHANTVASNASSVNVHADSSCSA
Number of Associated Samples	68
Number of Associated Scaffolds	106

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.09 %
% of genes near scaffold ends (potentially truncated)	27.36 %
% of genes from short scaffolds (< 2000 bps)	83.02 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.717 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.207 % of family members)
Environment Ontology (ENVO)	Unclassified (37.736 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.434 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 9.59% β-sheet: 36.30% Coil/Unstructured: 54.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.3.6.1: Aromatic compound dioxygenase	d4whsb_	4whs	0.64179
b.3.4.1: Transthyretin (synonym: prealbumin)	d1f86a_	1f86	0.63472
b.3.4.0: automated matches	d2g2na_	2g2n	0.62958
b.3.5.0: automated matches	d3rkpa3	3rkp	0.62895
b.3.4.0: automated matches	d2h6ua_	2h6u	0.62774

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 106 Family Scaffolds
PF02705	K_trans	30.19
PF03734	YkuD	11.32
PF00082	Peptidase_S8	2.83
PF07995	GSDH	1.89
PF01925	TauE	0.94
PF00756	Esterase	0.94
PF00487	FA_desaturase	0.94
PF01557	FAA_hydrolase	0.94
PF00732	GMC_oxred_N	0.94
PF02518	HATPase_c	0.94

COG ID	Name	Functional Category	% Frequency in 106 Family Scaffolds
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	30.19
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	11.32
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	11.32
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.89
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.94
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.94
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.94
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.94

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.60 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.60 %
Unclassified	root	N/A	43.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.72 %
Unclassified	root	N/A	43.40 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.13 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	12.26 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	2.83 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
rosids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
fabids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Fabales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Fabaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Papilionoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
50 kb inversion clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
genistoids sensu lato	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
core genistoids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Genisteae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Lupinus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.40 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2.83 %
Lupinus albus	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100787798	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300004082\|Ga0062384_100431889	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300004092\|Ga0062389_101952201	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005538\|Ga0070731_10364505	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300005995\|Ga0066790_10184748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	892	Open in IMG/M
3300009500\|Ga0116229_10214375	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	1651	Open in IMG/M
3300009500\|Ga0116229_10517083	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300009500\|Ga0116229_10929413	Not Available	701	Open in IMG/M
3300009633\|Ga0116129_1041128	All Organisms → cellular organisms → Bacteria → Proteobacteria	1473	Open in IMG/M
3300009701\|Ga0116228_10073984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2616	Open in IMG/M
3300010865\|Ga0126346_1433001	Not Available	577	Open in IMG/M
3300013314\|Ga0175859_1073825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2568	Open in IMG/M
3300014168\|Ga0181534_10000128	All Organisms → cellular organisms → Bacteria → Proteobacteria	53733	Open in IMG/M
3300014168\|Ga0181534_10329234	All Organisms → cellular organisms → Bacteria → Proteobacteria	830	Open in IMG/M
3300014201\|Ga0181537_10000940	All Organisms → cellular organisms → Bacteria → Proteobacteria	27389	Open in IMG/M
3300014492\|Ga0182013_10001886	All Organisms → cellular organisms → Bacteria → Proteobacteria	28024	Open in IMG/M
3300014495\|Ga0182015_10416207	All Organisms → cellular organisms → Bacteria → Proteobacteria	866	Open in IMG/M
3300014501\|Ga0182024_10465092	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300014501\|Ga0182024_10659512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1299	Open in IMG/M
3300014501\|Ga0182024_11691541	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300014502\|Ga0182021_13236288	Not Available	544	Open in IMG/M
3300014658\|Ga0181519_10394864	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300014838\|Ga0182030_10202114	All Organisms → cellular organisms → Bacteria → Proteobacteria	2375	Open in IMG/M
3300014838\|Ga0182030_10250781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2023	Open in IMG/M
3300014838\|Ga0182030_10624738	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300014838\|Ga0182030_11589669	Not Available	535	Open in IMG/M
3300019187\|Ga0184584_115058	Not Available	515	Open in IMG/M
3300020021\|Ga0193726_1000272	All Organisms → cellular organisms → Bacteria → Proteobacteria	65393	Open in IMG/M
3300020580\|Ga0210403_11378635	Not Available	535	Open in IMG/M
3300021170\|Ga0210400_10358327	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300021401\|Ga0210393_10266520	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300021404\|Ga0210389_10297879	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300021404\|Ga0210389_11188714	Not Available	587	Open in IMG/M
3300021407\|Ga0210383_11177196	Not Available	645	Open in IMG/M
3300021420\|Ga0210394_10002997	All Organisms → cellular organisms → Bacteria → Proteobacteria	22107	Open in IMG/M
3300021477\|Ga0210398_11007634	Not Available	664	Open in IMG/M
3300022528\|Ga0242669_1091975	Not Available	577	Open in IMG/M
3300022528\|Ga0242669_1104388	Not Available	553	Open in IMG/M
3300022716\|Ga0242673_1091811	Not Available	575	Open in IMG/M
3300023673\|Ga0247534_103862	Not Available	540	Open in IMG/M
3300025504\|Ga0208356_1007453	All Organisms → cellular organisms → Bacteria	2542	Open in IMG/M
3300025509\|Ga0208848_1001109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	5156	Open in IMG/M
3300026294\|Ga0209839_10091744	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300027559\|Ga0209222_1001132	All Organisms → cellular organisms → Bacteria → Proteobacteria	6216	Open in IMG/M
3300027609\|Ga0209221_1039615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1254	Open in IMG/M
3300027860\|Ga0209611_10025661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6295	Open in IMG/M
3300027860\|Ga0209611_10077279	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → rosids → fabids → Fabales → Fabaceae → Papilionoideae → 50 kb inversion clade → genistoids sensu lato → core genistoids → Genisteae → Lupinus → Lupinus albus	2367	Open in IMG/M
3300027860\|Ga0209611_10214075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1170	Open in IMG/M
3300027860\|Ga0209611_10532172	Not Available	656	Open in IMG/M
3300027908\|Ga0209006_10036999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4410	Open in IMG/M
3300027908\|Ga0209006_10311204	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300027908\|Ga0209006_10345585	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300027908\|Ga0209006_10711138	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300028765\|Ga0302198_10511714	Not Available	536	Open in IMG/M
3300028789\|Ga0302232_10411940	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300028866\|Ga0302278_10151321	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300029939\|Ga0311328_10747683	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300029954\|Ga0311331_10713339	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300029999\|Ga0311339_10556345	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300030007\|Ga0311338_10404563	All Organisms → cellular organisms → Bacteria → Proteobacteria	1464	Open in IMG/M
3300030007\|Ga0311338_11827256	Not Available	546	Open in IMG/M
3300030056\|Ga0302181_10398635	Not Available	594	Open in IMG/M
3300030503\|Ga0311370_10001203	All Organisms → cellular organisms → Bacteria → Proteobacteria	50473	Open in IMG/M
3300030503\|Ga0311370_11739240	Not Available	637	Open in IMG/M
3300030520\|Ga0311372_10669814	All Organisms → cellular organisms → Bacteria → Proteobacteria	1459	Open in IMG/M
3300030730\|Ga0307482_1217573	Not Available	587	Open in IMG/M
3300030730\|Ga0307482_1310538	Not Available	510	Open in IMG/M
3300030824\|Ga0265726_106721	Not Available	515	Open in IMG/M
3300031029\|Ga0074012_11416795	Not Available	536	Open in IMG/M
3300031231\|Ga0170824_128273161	Not Available	659	Open in IMG/M
3300031232\|Ga0302323_100250450	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300031234\|Ga0302325_12780977	Not Available	574	Open in IMG/M
3300031234\|Ga0302325_13227176	Not Available	520	Open in IMG/M
3300031236\|Ga0302324_103108606	Not Available	549	Open in IMG/M
3300031247\|Ga0265340_10475935	Not Available	550	Open in IMG/M
3300031474\|Ga0170818_104055117	Not Available	659	Open in IMG/M
3300031595\|Ga0265313_10082569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1456	Open in IMG/M
3300031663\|Ga0307484_111774	Not Available	597	Open in IMG/M
3300031708\|Ga0310686_103262570	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300031708\|Ga0310686_106092410	All Organisms → cellular organisms → Bacteria	1865	Open in IMG/M
3300031708\|Ga0310686_109669970	Not Available	541	Open in IMG/M
3300031708\|Ga0310686_112057813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1431	Open in IMG/M
3300031708\|Ga0310686_114550981	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300031708\|Ga0310686_116038183	All Organisms → cellular organisms → Bacteria → Proteobacteria	1333	Open in IMG/M
3300031715\|Ga0307476_10002360	All Organisms → cellular organisms → Bacteria → Proteobacteria	11292	Open in IMG/M
3300031715\|Ga0307476_10018658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4472	Open in IMG/M
3300031715\|Ga0307476_10147127	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1690	Open in IMG/M
3300031715\|Ga0307476_11350380	Not Available	519	Open in IMG/M
3300031753\|Ga0307477_10112427	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300031817\|Ga0316046_108353	Not Available	598	Open in IMG/M
3300031827\|Ga0247532_104492	Not Available	530	Open in IMG/M
3300031872\|Ga0316033_108634	Not Available	612	Open in IMG/M
3300032072\|Ga0326631_108498	Not Available	654	Open in IMG/M
3300032515\|Ga0348332_10155017	Not Available	628	Open in IMG/M
3300032515\|Ga0348332_11093788	Not Available	598	Open in IMG/M
3300032515\|Ga0348332_11301645	Not Available	529	Open in IMG/M
3300032515\|Ga0348332_11421112	Not Available	544	Open in IMG/M
3300032515\|Ga0348332_11456604	Not Available	586	Open in IMG/M
3300032515\|Ga0348332_12325977	Not Available	559	Open in IMG/M
3300032515\|Ga0348332_12810924	Not Available	574	Open in IMG/M
3300032515\|Ga0348332_13067040	Not Available	548	Open in IMG/M
3300032515\|Ga0348332_13073216	All Organisms → cellular organisms → Bacteria → Proteobacteria	808	Open in IMG/M
3300032515\|Ga0348332_14040105	Not Available	682	Open in IMG/M
3300032515\|Ga0348332_14173440	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300032756\|Ga0315742_12869206	Not Available	555	Open in IMG/M
3300034199\|Ga0370514_087213	Not Available	794	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.62%
Host-Associated	Host-Associated	10.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.02%
Plants	Host-Associated → Plants	10.38%
Aquatic	Environmental → Aquatic	6.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.55%
Peat	Environmental → Terrestrial → Peat	15.09%
Plant Litter	Environmental → Terrestrial → Plant Litter	10.38%
Peat Moss	Host-Associated → Plants → Peat Moss	7.55%
Freshwater	Environmental → Aquatic → Freshwater	6.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.89%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.94%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.26%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	10.38%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	7.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.60%
Loam	Environmental → Terrestrial → Soil → Loam	6.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.89%
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	0.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.32%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	10.38%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	10.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.55%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.60%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.77%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.83%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.83%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.94%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.94%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.94%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.94%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.94%
Moss Associated	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Moss Associated	0.94%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.94%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009701	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum fallax MG	Host-Associated	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300013314	Moss microbial communities from three moss species from boreal forest in Fairbanks, Alaska, USA Reanalysis	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023673	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027559	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030056	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030824	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031029	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Wood TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031817	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031827	Metatranscriptome of spruce litter microbial communities from Bohemian Forest, Czech Republic - CLI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031872	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032072	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1007877981	3300002245	Forest Soil	MRSPSKAVLFMSCLPLLYAGTVLGQGVEIKITNDGTEDIVVTVYDKTTNPARAVLTNQRINGFTSVPISLMGDATGRANLSWTATSADAASPKCGHADTVVSNADSVNVHADSSCSA*
Ga0062384_1004318891	3300004082	Bog Forest Soil	MRSQVRAALILSCLPLLFVGAALGGEGIEVKITNDGTEDIVVTVYDMNTSPERVVLTNARINGFTSVPISLVGDATGKANLSWTATSTDPVFPKCGHANTVAANAASVSVHADSSCSA*
Ga0062389_1019522012	3300004092	Bog Forest Soil	MRSHIKAVIFVCLPLLLAGTAFAGEGVEVKITNDGTEDILVTVYDLNTRPRRVVLTNERINGFTSVPVTLVGNATGKANLSWTATSVDPISPRCGHASAAASNADSVNVHADA
Ga0070731_103645052	3300005538	Surface Soil	MRNLNRAVLFMGCLPLLYAGTILGQGVEVKITNNGTEDIVVTVYDRTTNPARAVLTNQRINGFTSVPISLTGDATGKANLSWTATSADAASPKCGHADTIVSNADSVNVRADSSCSA*
Ga0066790_101847481	3300005995	Soil	RGQTVAVLILGCLPLLLAGTALGGEGVEVKITNDGTEDIVVTVYDMSTSPGRVVLTNAHINGFTSVPVTLVADATGKANLAWTATSTDPAFPKCGHASTVVGNDASVSVHADSSCSV*
Ga0116229_102143752	3300009500	Host-Associated	MRSLKGGLILSCLPLLLAGPVLADDGIDVKITNDGTEDIVVTVYDMSTSPKKVVLINARINGFTSVPISVIADANGRASVSWTATSVDHTSPKCGQAAAVVENAASVSVHADSACSV*
Ga0116229_105170832	3300009500	Host-Associated	MRSAITAGWMFGCLPLLLAGSVLADEGVDVKITNDGTEDIVVTVYDMNTKPSRVVLINARINGFTSVPISVVADAAGKANVSWTATSTDPTFPKCGHAAVMVDNAGSVSVHADSTCSA*
Ga0116229_109294131	3300009500	Host-Associated	MLSCLPLLLAGSVRADDGIDVKITNDGTEDIVVTVYDMSTNPGKVVLINARINGFTSVPISVIADATGRANVSWTATSVDHASPKCGHAAAVVENAASVSVHADSTCSV*
Ga0116129_10411282	3300009633	Peatland	MISGCLSLLLAGTAFGGEGVDVKITNDGTEDIVVTVYDTSTSPERVVLSNIRIYGFTSVPVSLVADATGRGSLSWTATSTDSVFRKCGHADTVVGDAASVNVHADSSCGA*
Ga0116228_100739843	3300009701	Host-Associated	MRRLKGGLILSSLPLLLLAGTVLADDGVDVKITNDGTEDIVVTVYDMSASPKKVVLINARINGFTSVPISLIADATGRASVSWTATSVDHTSPKCGHAAAVVENAGSVSVHADSTCSV*
Ga0126346_14330011	3300010865	Boreal Forest Soil	GFSEERKMRVPIRIALMASCLSLLYAGAVLGQGVEVKITNDGTEDILVTVYDRSTNPERAVLTRERINGFTSVPISLAADASGRASLSWTATSADAASPKCGHADTVVDNAGSVSVHVDSSCGA*
Ga0175859_10738252	3300013314	Moss Associated	MPSRLKAALVLTGMSLFTGTVFGGEGVEVKITNDGTEDILVTVYDMNTSPQRVVLTNARINGFTSVPVTLVGDSTGRANISWTATSADPASRRCGHASTAAGNTDTVNVHADSSCSA*
Ga0181534_1000012824	3300014168	Bog	LPPLLLAGAALADDGVDVKITNDGTEDIVVTVYDLNTTPKRVVLANARINGFTSVSVSLVGDASGKASLSWTATSIDPTFPKCGHANSVVGNASSVTVHADSSCSA*
Ga0181534_103292342	3300014168	Bog	PWLFAGMASGGEGIEVKITNDGTEDILVTVYDTNTRPRRVVLANERINGFSSVPVTLEEDATGMANLSWTAISVDATSRRCGQGSTVAKSADTVNVHTDSSCGS*
Ga0181537_1000094019	3300014201	Bog	MRIAIKAGWMLGFLPLMLAGPVLADEGVDVKITNDGTEDIVVTVYDMNTKPNHVVLINARINGFTSVPISVVADAAGKANVSWTATSTDPAFPKCGHAAVVVENAASVNVHADSTCSA*
Ga0182013_100018866	3300014492	Bog	MRKGTAAVVAVSCVTLLLAGTALGGEGIQVKITNDGTEDIMVTVYDMNTQPKKMVLTNARINGFTSVSISLVGDAAGKANLTWTATSADPASRKCGHAQTAASNDDSVNVHADSSCSA*
Ga0182015_104162072	3300014495	Palsa	LSAGTALGDDGIDVKITNDGTEDIVVTVYDMNTSPKRVVLANARINGFTSVPISLVGDASGMAKLSWTATSLDPAFPKCGHANSVVSSAGSVNVHADSSCSA*
Ga0182024_104650922	3300014501	Permafrost	MGSHIGAALIASCLPLLFAGSARGGEGVEVKITNDGTEDIVVTVYDMNTSPERVVLSNARINGFTSVPISLVGDATGKAHVSWTATSADAAFRRCGHANTMVSNAASVSVHADSSCSA*
Ga0182024_106595122	3300014501	Permafrost	MTSCLSLLYAGAIFGQGVEVKITNDGTEDILVTVYDRTTNPERAVLTRARINGFTSVPISLVGDASGRASLSWTATTADTASPKCGHADIVVGNADSVNVHVDSI*
Ga0182024_116915411	3300014501	Permafrost	MKAALILSCLPLFIAGTARGGEGVDVKITNDGTEVIMVTVYDMSADPGRMVLANARINGFSSVPISVVGDASGQAHLQWTATSTDPTFPKCGHAHTIVGNAGSVNVHVDSSCSA*
Ga0182021_132362881	3300014502	Fen	MLRKIEAAMILVCLPLLLAQTARGGEGVEVKITNDGTSDIFVTVYDMNTNPRKIVLTNARINGFTSVPISLVGDANGEAKLSWTATSTDAVSKKCGHAETTVSNSAAVNVHADSACSA*
Ga0181519_103948642	3300014658	Bog	MQSVLILSALALLSAGTALGQGVEVKITNDGTEDILVTVYDRTTQPERAVLTNQRINGFTSVPISLVGDATGRANLSWTATSADPDSQKCGHADTVVGNDDSVNVHADSTCKA*
Ga0182030_102021142	3300014838	Bog	MKAALILSCLPVFLAGAAQAGEGVDVKITNDGTEVIVVTVYDMSASPGRMVLANARINGFSSVPISVIADASGRANLRWTATSTDPTFPRCGHANTVAGNADSVNVHADSTCSV*
Ga0182030_102507811	3300014838	Bog	VPPVEFCREDTNMRSRNRAVLLLSCLPLLLAGTALGGEGIQVKITNDGTEDVMVTVYDMNTRPQKMVLTNARINGFTSVPISLVGDASGKANLSWTATSTDPASRKCGHGQTAASNDESVTVHADSTCSA*
Ga0182030_106247382	3300014838	Bog	MRGRTIATVILGCLPLLLAGTALSGEGVDVKITNDGTEDIVVTVYDMSTNPGRVVLTNAHINGFTSVSVNLVADATGKANLAWTATSTDPAFPKCGHASTVVGNDASVSVHADSSCSV*
Ga0182030_115896692	3300014838	Bog	MKAVLILSCLPLLLAGTARGGEGVEVKITNDGTQDIVVTVYDMNTTPNKMVLTNARINGFTSVPISLIGDANGKGKLSWTATSTDPDFPKCGHATSVVSNAGSVNVHADSSCGV*
Ga0184584_1150581	3300019187	Soil	PALAVFADRSEKMRSHMKALLILSCLPLLLARTALGGEGVDVKITNDGTDDIVVTVYDMNTSPERVVLTNARINGFTSVPISLVGDASGKANLTWTATSTDPTFPKCGHANTVVGNAASVNVRADSSCSV
Ga0193726_100027219	3300020021	Soil	MIFSQQRAVHAALILSWPLLLFGSGARGADSVDVNITNDGTEDILVTVYDMSTRPERIVFSNARINGFTSMPFFLFADANGKANLAWTATSADAVFPKCGHANIAVANAASVKVHADSECGA
Ga0210403_113786351	3300020580	Soil	CRYALVPPTIYRGWSPPQRFFREERKMRSPGKAVLCMSCLSLLYAGTVLGQGVEIKITNDGTEDIVVTVYDRTTNPARAVLTNQRINGFTSVPISLMGDATGRANLSWTATSADPASRKCGHADTVVSNADSVKVHADSSCNA
Ga0210400_103583272	3300021170	Soil	MRISTRMALMTSCLSLLYAGAILAQGVEVKITNDGTEDILVTVYDRTTNPERVVLTRQRINGFTSVPISLVGDASGRASLSWTATTADTASPKCGHADTVVGNADSVNVHVDSICGA
Ga0210393_102665202	3300021401	Soil	MSSHAGALLISSCLPLLLASTALGGEGVDVKITNNGTEDIVVTVYDTSTNPERVVLSNTRIYGFTSVPISLAADATGRGNLSWTATSTDSVFRKCGHADTVVGDAGSVNVHADSSCGV
Ga0210389_102978791	3300021404	Soil	MRSRAKALLILSCLPLLMAGTALAGEGVDVKITNDGTQDIVVTVYDTSTSPRRVVITNARMNGFTSLPVSLNADATGRANLSWTAISTDHEFRKCGHDDTVVGNSASVNVHADSSCET
Ga0210389_111887141	3300021404	Soil	MRSRTKALLILSCLPLLMAGTALGGEGVDVKITNDGTQDIVVTVYDTSTSPRRVVITNARMNGFTSLPVSLNADATGNANLSWTAISTDGNFRRCGHDDTVVANSASVSVHADSSCDT
Ga0210383_111771961	3300021407	Soil	WSPPQRFFREERKMRSPGKAVLCMSCLSLLYAGTVLGQGVEIKITNDGTEDIVVTVYDRTTNPARAVLTNQRINGFTSVPISLMGDATGRANLSWTATSTDPASRKCGHADTVVSNADSVKVHADSSCNA
Ga0210394_1000299712	3300021420	Soil	MRSPGKAVLCMSCLSLLYAGTVLGQGVEIKITNDGTEDIVVTVYDRTTNPARAVLTNQRINGFTSVPISLMGDATGRANLSWTATSTDPASRKCGHADTVVSNADSVKVHADSSCNA
Ga0210398_110076341	3300021477	Soil	MSSHAGALLISSCLPLLLASAALGGEGVDVKITNNGTEDIVVTVYDTSTNPERVVLSNTRIYGFTSVPISLAADATGRGNLSWTATSTDSVFRKCGHADTVVGDAGSVNVHADSSCGV
Ga0242669_10919751	3300022528	Soil	MRSRTKALLILSCLPLLMAGTALGGEGVDVKITNDGTQDIVVTVYDTSTSPRRVVITNARMNGFTSLPVSLNADATGNANLSWTAISTDGNFRRCGHDDTVVANSASVSVHADSSCDTLPATASTSVQ
Ga0242669_11043881	3300022528	Soil	MRSRAKALLILSCLPLLMAGTALAGEGVDVKITNDGTQDIVVTVYDTSTSPRRVVITNARMNGFTSLPVSLNADAAGRANLSWTAISTDHEFRKCGHDDTVVGNSASVNVHADSSCET
Ga0242673_10918111	3300022716	Soil	GFFRKERKMSSHAGALLISSCLPLLLASAALGGEGVDVKITNNGTEDIVVTVYDTSTNPERVVLSNTRIYGFTSVPISLAADATGRGNLSWTATSTDSVFRKCGHADTVVGDAGSVNVHADSSCGV
Ga0247534_1038621	3300023673	Soil	MRSHVKAALILSCLPLFFAATAQGGEGVAVKITNDGTEVIVVTVYDMSASPGRMVLANARINGFSSVPISVAADASGRAHLRWTATGTDPTFPRCGHAHTTVGNADSVNVHADSTCRV
Ga0208356_10074532	3300025504	Arctic Peat Soil	MRSPSKAVLFMSCLSLLYAGTVLGQGVEIKITNDGTEDIVVTVYDKTTNPARAVLTNQRINGFTSVPISLMGDATGRANLSWTATSADSASPKCGHADTVVNNADSVNVHADSSCNA
Ga0208848_10011094	3300025509	Arctic Peat Soil	MGSLIRAALIVSCFPLLFAGTAFGGEGVEVKITNDGADDIVVTVYDMNTSPERVVLSNARIYGFASLPISLVGDATGNANLSWTATGTDAKFPKCGHANMVASNASSVSVHADSSCSA
Ga0209839_100917442	3300026294	Soil	RGQTVAVLILGCLPLLLAGTALGGEGVEVKITNDGTEDIVVTVYDMSTSPGRVVLTNAHINGFTSVPVTLVADATGKANLAWTATSTDPAFPKCGHASTVVGNDASVSVHADSSCSV
Ga0209222_10011322	3300027559	Forest Soil	MSSHSRALPRALLISGCLSLLLAGTAFGGEGVDVKITNDGTEDIVVTVYDTSTSPERLVLSNIRIYGFTSVPVSLVADATGRGNLSWTATSTDSVFRKCGHADTVVGDTGSVNVHADSSCGA
Ga0209221_10396152	3300027609	Forest Soil	MSSHTGALLISSCLPLLLASAALGGEGVDVKITNDGTEDIVVTVYDTSASPERVVLSNTRIYGFTSVPISLVADATGRGSLSWTATSTDSVFRKCGHADTVVGDAGSVNVHADSSCGV
Ga0209611_100256614	3300027860	Host-Associated	MRSLKGGLILSCLPLLLAGPVLADDGIDVKITNDGTEDIVVTVYDMSTSPKKVVLINARINGFTSVPISVIADANGRASVSWTATSVDHTSPKCGQAAAVVENAASVSVHADSACSV
Ga0209611_100772792	3300027860	Host-Associated	MRRLKGGLILSSLPLLLLAGTVLADDGVDVKITNDGTEDIVVTVYDMSASPKKVVLINARINGFTSVPISLIADATGRASVSWTATSVDHTSPKCGHAAAVVENAGSVSVHADSTCSV
Ga0209611_102140752	3300027860	Host-Associated	MRSAITAGWMFGCLPLLLAGSVLADEGVDVKITNDGTEDIVVTVYDMNTKPSRVVLINARINGFTSVPISVVADAAGKANVSWTATSTDPTFPKCGHAAVMVDNAGSVSVHADSTCSA
Ga0209611_105321722	3300027860	Host-Associated	MRSVIGGWMLSCLPLLLAGSVRADDGIDVKITNDGTEDIVVTVYDMSTNPGKVVLINARINGFTSVPISVIADATGRANVSWTATSVDHASPKCGHAAAVVENAASVSVHADSTCSV
Ga0209006_100369992	3300027908	Forest Soil	MRSPSKAVLFMSCLPLLYAGTVLGQGVEIKITNDGTEDIVVTVYDKTTNPARAVLTNQRINGFTSVPISLMGDATGRANLSWTATSADAASPKCGHADTVVSNADSVNVHADSSCSA
Ga0209006_103112042	3300027908	Forest Soil	MRNVMKAVLILSCIPLLWARMAFGGEGVDVKITNDGTEDIVVTVYDMNTSPERVVLANAHINGFTSVPITLTADANGKASLSWTATSADAAFPKCGHADAVVSGEAPVNVHADSSCSV
Ga0209006_103455852	3300027908	Forest Soil	MRNRVKALLILSCLPLLMAGTALGGEGVDVKITNDGTQDIVVTVYDTSTSPRRVVITNARMNGFTSLPVSLNADATGRANLSWTAISTDGDFRKCGHDDTVVANSASVSVHADSSCDSLAATASTSVQ
Ga0209006_107111382	3300027908	Forest Soil	MSSHAGARLISSCLPLLLASTALGGEGVDVKITNNGTEDIVVTVYDTSTNPERVVLSNTRIYGFTSVPISLAADATGRGNLSWTATSTDSVFRKCGHADTVVGDAGSV
Ga0302198_105117141	3300028765	Bog	MRSHMKAALILSCLPVFLAGAAQAGEGVDVKITNDGTEVIVVTVYDMSASPGRMVLANARINGFSSVPISVIADASGRANLRWTATSTDPTFPRCGHANTVAGNADSVNVHADSTCSV
Ga0302232_104119402	3300028789	Palsa	MSSRTGALLISSCLPLLLASAALGGEGVDVKITNDGTEDIVVTVYDTSTSPERVVLSNTRIYGFTSVPISLVADATGRGSLSWTATSTDSVFRKCGHADTVVGDAGSVNVHVDSSCG
Ga0302278_101513212	3300028866	Bog	MRSPVKAVMILTCLAAFWTGTALSDDGVDVKITNDGTEDILVTVYDMNARPHRVVLTNARINGFTSVPVSLIADASGLANLRWTATNTDHSFPKCGHASTVVANAGSVNVHADSSCST
Ga0311328_107476831	3300029939	Bog	MRSHMKAALILSCLPVFLAGAAQAGEGVDVKITNDGTEVIVVTVYDMSASPGRMVLANARINGFSSVPISVIADASGRANLRWTATSTDPTFPRCGHANTVAGNAD
Ga0311331_107133391	3300029954	Bog	MRSHMKAALILSCLPVFLAGAAQAGEGVDVKITNDGTEVIVVTVYDMSASPGRMVLANARINGFSSVPISVIADASGRANLRWTATSTDPTFPRCGHANTVAGNADSVN
Ga0311339_105563452	3300029999	Palsa	MRSRTIAALLSCSTLIAAGAALGGEGVQVKITNNGTEDVLVTVYDMNARPQRAVLTNARINGFTSVPISLVGDASGKASLSWTATSGDAASRKCGHAATVVGNDASVSVHADSACSA
Ga0311338_104045632	3300030007	Palsa	MRSQVGAALLLTCLPLLFAGAALGGEGIEVKITNDGTEDIVVTVYDMNTSPERVVLTNTRINGFTSVPISLVGDATGKANLSWTATSTDPVFPKCGHANTAAANSATVSVHADSTCSA
Ga0311338_118272561	3300030007	Palsa	MRSQRKAMLILSCLPLLLAGTALGDEGVTVKITNDGTEDIVVTVYDMNTSPQRMVLTNARINGFTSVPISLVGDASGRANLTWTATSTDPVSPKCGHANTVASNASSVNVH
Ga0302181_103986351	3300030056	Palsa	SAALGGEGVDVKITNDGTEDIVVTVYDTSTSPERVVLSNTRIYGFTSVPISLVADATGRGSLSWTATSTDSVFRKCGHADTVVGDAGSVNVHVDSSCGV
Ga0311370_1000120323	3300030503	Palsa	MSSRTGALLISSCLPLLLASAALGGEGVDVKITNDGTEDIVVTVYDTSTSPERVVLSNTRIYGFTSVPISLVADATGRGSLSWTATSTDSVFRKCGHADTVVGDAGSVNVHVDSSCGV
Ga0311370_117392401	3300030503	Palsa	SEFPALAVIADRSEKMPGQMKTVLILSCLPLLLARTALGGEGVDVKITNDGTEDIVVTVYDMNTTPERVVLTNARINGFTSVPISLVGDASGMANLKWTATSTDPTFPKCGHANTVVGNSASVSVRADSSCSV
Ga0311372_106698142	3300030520	Palsa	MRSQRKAMLILSCLPLLLAGTALGDEGVTVKITNDGTEDIVVTVYDMNTSPQRMVLTNARINGFTSVPISLVGDASGRANLTWTATSTDPVSPKCGHANTVASNASSVNVHADSSCSA
Ga0307482_12175732	3300030730	Hardwood Forest Soil	MRNLNRAVLFMGCLPLLYAGTVLGQGVEVKITNNGTEDIVVTVYDRTTNPARAVLTNQRINGFTSVPISLTGDATGKANLSWTATSADAASPKCGHADTIVSNADSVNVRADSSCSA
Ga0307482_13105381	3300030730	Hardwood Forest Soil	MRSQKFRLKAILILGCLPLAMAGTALGGDGVAVKITNDGTEDILVTVYDMNTSPQRVVLSERINGFASVPISVAGDDTGRASLAWTATSTDPVFPKCGHATSVVGNSASVKVHADSSCSA
Ga0265726_1067211	3300030824	Soil	MRSHTKAALILSCLPIFLAGTAQSDEGVDVKITNDGSEVILVTVYDMSASPGRMVLANARINGFASVPISVVADATGRANLRWTATGTDPTFPKCGHSLTTVGNADSVNVHADSTCSV
Ga0074012_114167951	3300031029	Soil	MRGPVKAVLILSCLPLLLAGVALGGEGVEVKITNDGTEDIVVTVYDMNTTPKKVVLTNARINGFTSVPISLIGDANGKGNLSWTATSTDPNSPKCGHATTAVSNAGSVSVHADSACSA
Ga0170824_1282731611	3300031231	Forest Soil	MRARMTTVVILVLPLLFFGTALGGEGVEVRITNDGTTDVLVTVYDLNTNPKRVVLTNARINGFTSVPVSLVGDASGKAKLSWTATSTDTASPKCDHEDAVAGNAGSVKVHADSSCAA
Ga0302323_1002504502	3300031232	Fen	MRCKPIGALMLTALWLLSAGSAFSDDGVDVKITNDGTQDIVVTVYDLNTNPRRAVLSNARINGFTSIPISLVADAGGKARISWTATTTDVNFRKCGHAQAVVGDTDTINVHADSSCGGSS
Ga0302325_127809771	3300031234	Palsa	MRSPMKAVLLLSCLPLLLVLSAGTALGDDGIDVKITNDGTEDIVVTVYDMNTSPKRVVLANARINGFTSVPISLVGDASGRAKLSWTATSLDPTFPKCGHANSVVSSAGSVHVHADSSCR
Ga0302325_132271761	3300031234	Palsa	GTTLGGDGVDIKITNDGTDDILVTVYDMNVSPRNVVLSNERINGFTSVPLTLTGDATGKANLTWTAVSADSTSRRCGHASTAASNADSVNVHADSSCSA
Ga0302324_1031086061	3300031236	Palsa	MRTATRLALVLSLLPLSLIGGAALGDGVEVKITNDGTEDIVVTVYDMSVKPYRVVLAAERINGFTTVPISVGADATGKANLSWTATSTDGNSRKCGHEEDLAVGDDASVNVHADSSCSA
Ga0265340_104759352	3300031247	Rhizosphere	MRRHAKGKFILSCLPLLLAGTALGGEGIEVKITNDGTEDILVTVYDMNTTPKHVVLTNERINGFTSVPISLVGDANGKANLSWTATSTDTASRKCGHADNVVSDANSVSVHADSSCST
Ga0170818_1040551171	3300031474	Forest Soil	MRARMTTVVILVLPLLFFGTALGGEGVEVRITNDGTTDVLVTVYDLNTNPKRVVLTNARINGFTSVPVSLVGDASGKAKLSWTATSTDMASPKCDHEDAVAGNAGSVKVHADSSCAA
Ga0265313_100825692	3300031595	Rhizosphere	MRSRMIAAFIGSTVLLTGGAAVGGEGIQVKITNDGTEDVMVTVYDMNSQPQRMVLTNARINGFTSVPVSLVADATGRANLTWTATSTDAANRKCGHAAAVAGNDDTVAVHADSSCSA
Ga0307484_1117741	3300031663	Hardwood Forest Soil	RKMRSPSKAVLFMSCLSLLYAGAVLGQGVEIKITNDGTEDIVVTVYDRTTNPARAVLTNQRINGFTSVPISLMGDATGRANLSWTATSADPASPKCGHADTVVSNAGSVNVHADSSCNA
Ga0310686_1032625702	3300031708	Soil	VRSHMKAALILSCLPLFLAATAQGGEGVDVKITNDGTEVILVTVYDMSANPGRMVLANARINGFSSVPISVVADASGRAHLRWTATGTDPTFPKCGHAHTTV
Ga0310686_1060924102	3300031708	Soil	MRSRAIALLISSCLPLLMAGTAVAGEGFYIKIANDGTQDLVVTLYDTSTSPRRVIITDARMNGFTSLPIWLNADATGRVNLSWTAISTDREFRKCGHDDTVVANSASVKVHADSSCDT
Ga0310686_1096699701	3300031708	Soil	MSSHTGALLISSCLPLLLASTALGGEGVDVKITNDGTADIVVTVYDTSTNPERVVLSNTRIYGFTSVPISLVADATGRGSLSWTATSTDSVFRKCGHADTVVGDAGSVNVHADS
Ga0310686_1120578132	3300031708	Soil	MRSHIKAALILSGLSVFWAGTAISDDGVDVKITNDGTEDILVTVYDMNTSPGRVVLTNARINGFTSVPVSLVADASGRANLRWTATTTDHAFPKCGHANTSVANADSVTVHADSTCSI
Ga0310686_1145509811	3300031708	Soil	MRSHMKAALILSCLPLFFAATAQGGEGVAIKITNDGTEVIMVTVYDMSASPGRMVLANARINGFSSVPISVVADASGRVHLRWTATGTDPAFPRCGHAHTTVGNADSVNVH
Ga0310686_1160381832	3300031708	Soil	MRSRAKALLILSCLPLLMAGTALAGEGVDVKITNDGTQDIVVTVYDTSTSPRRVVITNARMNGFTSLPVSLNADATGRANLSWTAISTDREFRKCGHDDTVVANSGSVTVHADSSCDT
Ga0307476_100023602	3300031715	Hardwood Forest Soil	MRSPSKAVLFMSCLSLLYAGAVLGQGVEIKITNDGTEDIVVTVYDRTTNPARAVLTNQRINGFTSVPISLMGDATGRANLSWTATSADPASPKCGHADTVVSNAGSVNVHADSSCNA
Ga0307476_100186583	3300031715	Hardwood Forest Soil	MRRTMQSALILSCLPLLLAGAALGGEGVDVKITNDGTEDIVVTVYDMNTSPERVVLVNARINGFTSVPISVVGDAAGRANLSWTATSTDAVFPKCGHANTVVRNTASVSVHADSSCSV
Ga0307476_101471272	3300031715	Hardwood Forest Soil	MSSHSSALLISSCLPLLLAGAALGGDGVDVKITNDGTEDIVVTVYDMSTSPERVVLSNTRIYGFTSVPISLVADATGRGNLSWTATSTDSVFRKCGHADTVVGDAASVNVHADSSCGV
Ga0307476_113503801	3300031715	Hardwood Forest Soil	PQRVFREERKMRNLNRAVLFMGCLPLLYAGTVLGQGVEVKITNNGTEDIVVTVYDRTTNPARAVLTNQRINGFTSVPISLTGDATGKANLSWTATSADAASPKCGHADTIVSNADSVNVRADSSCSA
Ga0307477_101124272	3300031753	Hardwood Forest Soil	MSCLSLLYAGAVLGQGVEIKITNDGTEDIVVTVYDRTTNPARAVLTNQRINGFTSVPISLMGDATGRANLSWTATSADPASPKCGHADTVVSNAGSVNVHADSSCNA
Ga0316046_1083532	3300031817	Soil	MRSHIKAALILSGLSVFWAGTAISDDGVDVKITNDGTEDILVTVYDMNTSPGRVVLTNARINGFTSVPVSLVADASGRANLRWTATNTDHAFPKCGHANTSVANADSVTVHADSTCSI
Ga0247532_1044922	3300031827	Soil	MRSHMKAALILSCLPLFFAATAQGGEGVAIKITNDGTEVIVVTVYDMSASPGRMVLANARINGFSSVPISVVADASGRVHLRWTATGTDPAFPRCGHAHTTVGNADSVNVHADSTCRV
Ga0316033_1086341	3300031872	Soil	MRSHMKAALILSCLPLFFAATAQGGEGVAIKITNDGTEVIMVTVYDMSASPGRMVLANARINGFSSVPISVVADASGRVHLRWTATGTDPTFPRCGHAHTTVGNADSVNVHADSTCRV
Ga0326631_1084981	3300032072	Soil	MRSHMEAALILSCLPLFFAATAQGGEGVAIKITNDGTEVIMVTVYDMSASPGRMVLANARINGFSSVPISVVADASGRVHLRWTATGTDPAFPRCGHAHTTVGNADSVNVHADSTCRV
Ga0348332_101550171	3300032515	Plant Litter	MRSHMKAALILSCLPLFFAATAQGGEGVAIKITNDGTVVIMVTVYDMSASPGRMVLANARINGFSSVPISVVADASGRVHLRWTATGTDPAFPRCGHAHTTVGNADSVNVHADSTCRV
Ga0348332_110937881	3300032515	Plant Litter	RFPRRSEKMRSHIKAALILSCLPLFLASTAQGGEGVDVMITNDGTEVIMVTVYDMSASPGRMVLANARINGFSSVPISVAGDASGRAHLQWTAIGTDPSFPRCGQAHTTVGNAGSVNVHADSTCSV
Ga0348332_113016451	3300032515	Plant Litter	LSMFWAGTAISDDGVDVKITNDGTEDILVTVYDMNSGRGRVVLTNARINGFTSVPVSLVADSTGRANLRWTATNTDHTFPKCGQANTTVGNADSVNVHADSSCSI
Ga0348332_114211121	3300032515	Plant Litter	MRNRAKALMILSCLPLLMAGTALAGEGVDVKITNDGTQDIVVTIYDTSTSPRRVVITNARINGFTSLPVSLNADATGRANLSWTAISTDREFLKCGHDDTVVANSASVNVHADSSCET
Ga0348332_114566041	3300032515	Plant Litter	MRSHMKAALILSCVPAFFAATAQGDEGVDVKITNDGTEVIMVTVYDMSASPGRMVLANERINGFSSVPISVVGDASGRAHLTWTAVGTDPTFPRCGHAHTTVGNADSVNVHVDSSCRV
Ga0348332_123259772	3300032515	Plant Litter	MRSRAKALLILSCLPVLIGGTALADEGVDVKITNDGTQDIVVTVYDTSTSPRRAVMTNARINGFASLPVSLNADATGRANLSWTAISTDREFRQCGHDNTVVAGSSSVNVHADSSCDT
Ga0348332_128109241	3300032515	Plant Litter	MRAVKLGALTLTLLQLSLVGTAARADGVEVKITNDGTEDIVVTVYDMSVRPSRVVLASQRINGFTTVPISVGADANGKAALSWTATSTDAASRKCGHADNVGVGDSSSVNVHADSSCSA
Ga0348332_130670401	3300032515	Plant Litter	RSTGYFLEERNMRSHLKTLLILGALPLLWAGAACAEGVDVKITNDGTQDIVVTVYDTSTSPQRVVLTNARINGFTSVPISLVADATGRANLSWTATSTDPTFPKCGHADTVVSNSASVKVHADSSCGA
Ga0348332_130732161	3300032515	Plant Litter	RLDGFFRKERKMSSHTGALLISSCLPLLLASTALGGEGVDVKITNDGTADIVVTVYDTSTNPERVVLSNTRIYGFTSVPISLVADATGRGSLSWTATSTDSVFRKCGHADTVVGDAGSVNVHADSSCGA
Ga0348332_140401052	3300032515	Plant Litter	MRSQMKAAFILSCLPVFLAGTAQGGEGVDVKITNDGTEDILVTVYDMSTNPGRMVLTNARINGFTSVPISLIADATGQANLAWTATSTDTASPRCGHAKTVVGNSASVNVHADSTCSV
Ga0348332_141734402	3300032515	Plant Litter	MRSHTKAALILSCLPIFLAGTAQSDEGVDVKITNDGSEVILVTVYDMSASPGRMVLANARINGFASVPISVVADATGRANLRWTATGTDPAFPKCGHALTTVVNADSVNVHADSTCSV
Ga0315742_128692061	3300032756	Forest Soil	MSKHSSALLISSCLPLLLAGAALAGEGVDVKITNDGTEDIVVTVYDTSTSPERVVLSNTRIYGFTSVPVSLVADATGRGNLSWTATSTDSVFRKCGHADTVVGDTGSVNVHADSSCGA
Ga0370514_087213_257_613	3300034199	Untreated Peat Soil	MRGRTIAIVILGCLPLLLAGTALSGEGVDVKITNDGTEDIVVTVYDMSTNPGRVVLTNAHINGFTSVPVTLVADATGKANLAWTATSTDPAFPKCGHANTVVGNDASVSVHADSSCGV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F093122

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences