Metagenome Family F085354

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085354
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	76 residues
Representative Sequence	MAKRAAEPKPAAPQAEDRFVELMLVAADFVKSCGGLDSAKKALADAGQFIKQAGGVANAEKALGVLENLKDKIG
Number of Associated Samples	82
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.28 %
% of genes near scaffold ends (potentially truncated)	26.13 %
% of genes from short scaffolds (< 2000 bps)	88.29 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.153 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (9.009 % of family members)
Environment Ontology (ENVO)	Unclassified (28.829 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.450 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.92% β-sheet: 0.00% Coil/Unstructured: 46.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF02567	PhzC-PhzF	12.61
PF00533	BRCT	9.01
PF00891	Methyltransf_2	4.50
PF13544	Obsolete Pfam Family	4.50
PF07963	N_methyl	2.70
PF00920	ILVD_EDD	1.80
PF13633	Obsolete Pfam Family	1.80
PF12826	HHH_2	1.80
PF00111	Fer2	1.80
PF13360	PQQ_2	1.80
PF00543	P-II	0.90
PF07596	SBP_bac_10	0.90
PF00977	His_biosynth	0.90
PF00884	Sulfatase	0.90
PF02746	MR_MLE_N	0.90
PF05343	Peptidase_M42	0.90
PF03460	NIR_SIR_ferr	0.90
PF03328	HpcH_HpaI	0.90
PF00563	EAL	0.90
PF00133	tRNA-synt_1	0.90
PF07722	Peptidase_C26	0.90
PF13180	PDZ_2	0.90
PF00353	HemolysinCabind	0.90
PF01954	AF2212-like	0.90
PF03795	YCII	0.90
PF00795	CN_hydrolase	0.90
PF14520	HHH_5	0.90
PF00072	Response_reg	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	12.61
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	3.60
COG2165	Type II secretory pathway, pseudopilin PulG	Cell motility [N]	1.80
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.80
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	0.90
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.90
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90
COG1362	Aspartyl aminopeptidase	Amino acid transport and metabolism [E]	0.90
COG1363	Putative aminopeptidase FrvX	Carbohydrate transport and metabolism [G]	0.90
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90
COG2195	Di- or tripeptidase	Amino acid transport and metabolism [E]	0.90
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.90
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.90
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.90
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.90
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.90
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.90
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.90
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.15 %
Unclassified	root	N/A	46.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.15 %
Unclassified	root	N/A	46.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.15 %
Unclassified	root	N/A	46.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	30.63 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.80 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.80 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	30.63 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.80 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	1.80 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	20.72 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.80 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.80 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.90 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	9.01 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	5.41 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	4.50 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.80 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.80 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	8.11 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	5.41 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	4.50 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.80 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.80 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Pirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula	6.31 %
Zavarzinella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella	3.60 %
Anatilimnocola	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola	1.80 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.80 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.80 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Pirellula staleyi	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	6.31 %
unclassified Zavarzinella	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella	3.60 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.80 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.80 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.90 %
Anatilimnocola aggregata	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola → Anatilimnocola aggregata	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Pirellula staleyi	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	6.31 %
Zavarzinella sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	3.60 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.80 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.80 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.90 %
Anatilimnocola aggregata	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola → Anatilimnocola aggregata	0.90 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.90 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_10563479	Not Available	1017	Open in IMG/M
2170459013\|GO6OHWN02FZFE9	Not Available	512	Open in IMG/M
3300001213\|JGIcombinedJ13530_109367793	Not Available	593	Open in IMG/M
3300002568\|C688J35102_120564697	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300004114\|Ga0062593_100138765	Not Available	1816	Open in IMG/M
3300004114\|Ga0062593_100227618	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	1516	Open in IMG/M
3300004114\|Ga0062593_102869982	Not Available	550	Open in IMG/M
3300004156\|Ga0062589_101417269	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300004157\|Ga0062590_100090259	Not Available	1897	Open in IMG/M
3300004463\|Ga0063356_100663484	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300004463\|Ga0063356_100722892	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	1374	Open in IMG/M
3300004463\|Ga0063356_101081081	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300004463\|Ga0063356_102435765	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	801	Open in IMG/M
3300004643\|Ga0062591_101761882	Not Available	630	Open in IMG/M
3300004643\|Ga0062591_102579012	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	535	Open in IMG/M
3300005093\|Ga0062594_100622833	Not Available	952	Open in IMG/M
3300005177\|Ga0066690_10697181	Not Available	672	Open in IMG/M
3300005294\|Ga0065705_10206149	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	1398	Open in IMG/M
3300005330\|Ga0070690_101173353	Not Available	611	Open in IMG/M
3300005332\|Ga0066388_100185342	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	2693	Open in IMG/M
3300005332\|Ga0066388_100547005	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1788	Open in IMG/M
3300005332\|Ga0066388_100902197	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1462	Open in IMG/M
3300005332\|Ga0066388_100941921	Not Available	1436	Open in IMG/M
3300005365\|Ga0070688_101693995	Not Available	517	Open in IMG/M
3300005436\|Ga0070713_100962832	Not Available	822	Open in IMG/M
3300005455\|Ga0070663_101501723	Not Available	599	Open in IMG/M
3300005529\|Ga0070741_10243140	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1719	Open in IMG/M
3300005548\|Ga0070665_100659546	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	1059	Open in IMG/M
3300005577\|Ga0068857_101861670	All Organisms → cellular organisms → Bacteria → FCB group	589	Open in IMG/M
3300005615\|Ga0070702_100670977	Not Available	786	Open in IMG/M
3300005713\|Ga0066905_100905889	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005713\|Ga0066905_100993198	Not Available	740	Open in IMG/M
3300005713\|Ga0066905_101570297	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300005764\|Ga0066903_101139602	Not Available	1442	Open in IMG/M
3300005764\|Ga0066903_102918130	Not Available	927	Open in IMG/M
3300005841\|Ga0068863_100373146	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300005844\|Ga0068862_100701945	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300005844\|Ga0068862_101867206	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300006051\|Ga0075364_10138132	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1638	Open in IMG/M
3300006804\|Ga0079221_10844445	Not Available	663	Open in IMG/M
3300006844\|Ga0075428_100017562	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	7903	Open in IMG/M
3300006844\|Ga0075428_101686481	Not Available	661	Open in IMG/M
3300006845\|Ga0075421_101002750	Not Available	945	Open in IMG/M
3300006854\|Ga0075425_101918270	Not Available	663	Open in IMG/M
3300006904\|Ga0075424_101430207	Not Available	734	Open in IMG/M
3300007004\|Ga0079218_13285762	Not Available	547	Open in IMG/M
3300009012\|Ga0066710_102475337	Not Available	751	Open in IMG/M
3300009092\|Ga0105250_10624178	Not Available	501	Open in IMG/M
3300009093\|Ga0105240_12371769	Not Available	549	Open in IMG/M
3300009098\|Ga0105245_12877762	Not Available	533	Open in IMG/M
3300009137\|Ga0066709_100218221	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	2523	Open in IMG/M
3300009137\|Ga0066709_101546720	Not Available	954	Open in IMG/M
3300009147\|Ga0114129_10889519	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola	1129	Open in IMG/M
3300009156\|Ga0111538_12339678	Not Available	671	Open in IMG/M
3300009162\|Ga0075423_10850201	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300009162\|Ga0075423_11850475	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300009609\|Ga0105347_1178440	Not Available	844	Open in IMG/M
3300009609\|Ga0105347_1297059	Not Available	677	Open in IMG/M
3300009610\|Ga0105340_1026920	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2236	Open in IMG/M
3300010036\|Ga0126305_11297390	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	502	Open in IMG/M
3300011416\|Ga0137422_1161968	Not Available	520	Open in IMG/M
3300011432\|Ga0137428_1041613	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1197	Open in IMG/M
3300011439\|Ga0137432_1007496	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	3028	Open in IMG/M
3300011439\|Ga0137432_1066072	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Anatilimnocola → Anatilimnocola aggregata	1102	Open in IMG/M
3300011445\|Ga0137427_10025797	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300012202\|Ga0137363_10857587	Not Available	771	Open in IMG/M
3300012212\|Ga0150985_110509285	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	1046	Open in IMG/M
3300012212\|Ga0150985_110809623	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	3496	Open in IMG/M
3300012212\|Ga0150985_115510089	Not Available	512	Open in IMG/M
3300012212\|Ga0150985_118558610	Not Available	689	Open in IMG/M
3300012469\|Ga0150984_111517974	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2186	Open in IMG/M
3300012469\|Ga0150984_121396087	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	505	Open in IMG/M
3300012469\|Ga0150984_121700375	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	922	Open in IMG/M
3300012469\|Ga0150984_122794883	Not Available	565	Open in IMG/M
3300012685\|Ga0137397_10091019	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2227	Open in IMG/M
3300012921\|Ga0164290_1000184	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	236350	Open in IMG/M
3300012922\|Ga0137394_10773637	Not Available	805	Open in IMG/M
3300012923\|Ga0137359_10909069	Not Available	759	Open in IMG/M
3300012929\|Ga0137404_11206356	Not Available	696	Open in IMG/M
3300012943\|Ga0164241_11203973	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	560	Open in IMG/M
3300012987\|Ga0164307_10522157	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300012988\|Ga0164306_11379756	Not Available	599	Open in IMG/M
3300012989\|Ga0164305_11889371	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300015371\|Ga0132258_10578914	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2817	Open in IMG/M
3300015371\|Ga0132258_11270228	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300015371\|Ga0132258_12763727	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1223	Open in IMG/M
3300015371\|Ga0132258_13547181	Not Available	1068	Open in IMG/M
3300015373\|Ga0132257_101641271	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	823	Open in IMG/M
3300015374\|Ga0132255_102716677	Not Available	757	Open in IMG/M
3300017540\|Ga0180217_1022413	All Organisms → cellular organisms → Bacteria	3271	Open in IMG/M
3300018063\|Ga0184637_10300499	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	972	Open in IMG/M
3300018083\|Ga0184628_10593699	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	561	Open in IMG/M
3300018084\|Ga0184629_10438978	Not Available	684	Open in IMG/M
3300018422\|Ga0190265_13073959	Not Available	557	Open in IMG/M
3300018469\|Ga0190270_11611459	Not Available	701	Open in IMG/M
3300018476\|Ga0190274_11460058	Not Available	774	Open in IMG/M
3300021082\|Ga0210380_10011528	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Pirellula → Pirellula staleyi	3692	Open in IMG/M
3300021082\|Ga0210380_10047898	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1843	Open in IMG/M
3300024055\|Ga0247794_10123578	Not Available	789	Open in IMG/M
3300026088\|Ga0207641_11156024	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300026116\|Ga0207674_11212117	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300027513\|Ga0208685_1034396	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1114	Open in IMG/M
3300027533\|Ga0208185_1080841	Not Available	768	Open in IMG/M
3300027909\|Ga0209382_11672666	Not Available	626	Open in IMG/M
3300028379\|Ga0268266_10519849	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Zavarzinella → unclassified Zavarzinella → Zavarzinella sp.	1138	Open in IMG/M
3300028380\|Ga0268265_10874001	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300031716\|Ga0310813_10298073	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1359	Open in IMG/M
3300031716\|Ga0310813_11467319	Not Available	634	Open in IMG/M
3300032013\|Ga0310906_11076992	Not Available	581	Open in IMG/M
3300034147\|Ga0364925_0124023	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	927	Open in IMG/M
3300034151\|Ga0364935_0024580	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.16%
Host-Associated	Host-Associated	37.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	47.75%
Plants	Host-Associated → Plants	37.84%
Aquatic	Environmental → Aquatic	14.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	45.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.02%
Sediment	Environmental → Aquatic → Sediment	11.71%
Freshwater	Environmental → Aquatic → Freshwater	1.80%
Floodplain	Environmental → Terrestrial → Floodplain	1.80%
Marine	Environmental → Aquatic → Marine	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.33%
Loam	Environmental → Terrestrial → Soil → Loam	12.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.80%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.12%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.01%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.80%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.90%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	9.01%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.11%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.21%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.41%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.50%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.60%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.70%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.80%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.90%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	0.90%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.90%
Contaminated Culture	Environmental → Terrestrial → Soil → Unclassified → Desert → Contaminated Culture	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300011416	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT551_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012921	Contaminated culture microbial community from soil near Moab, Utah, USA - Microcoleus steenstrupii SON62 (Illumina Assembly)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017540	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C BE-Lig OP (version 2)	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0390.00002810	2162886013	Switchgrass Rhizosphere	MAKKAPEPKPAVPQQEDKFVELMLVAAEFVKGCGGMQAARKALAETGQFIKSAGGVANAEKALGVLESLKDKIG
N57_00896250	2170459013	Grass Soil	MAKRAAESKPASKPASPLAEDRFVELMLVAADFVKSCGGLSEAKKALADAGQFIKQAGGVPNAEKALGVLESLKDKIGA
JGIcombinedJ13530_1093677932	3300001213	Wetland	MAKRAAESKPAAPPAEDRFVELMLVAADFVKSCGGLTEAKKALTDAGQFIHHAGSVANAEKAISVLESLR
C688J35102_1205646972	3300002568	Soil	MAKRTAAAPQAPQPKAEDRFIELMLVAADFVKNCGGLEQAKKSLADAGQFIHQAGGVSSAEKALHVLESLKEKIGS*
Ga0062593_1001387652	3300004114	Soil	MAKRAAVNQANSSGAEERFVELMLVAADFVRNCGGLEPAKKALADAGQFIERAKGVANAEKALEVLENLRERISV*
Ga0062593_1002276183	3300004114	Soil	MAKRAAAEPKPAAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALADAGQFIHRAGNVSNAEKALDVLESLREKIG*
Ga0062593_1028699821	3300004114	Soil	MAKRAAAAAESKPAVNSNEENFVELMLVAADFVKCCGGLEHAKKSLDDAGQFITKAGGVSKASKALSVLENLKERIG*
Ga0062589_1014172691	3300004156	Soil	GLYRTFLINIWEIVMAKRAAESKNAAPPAEDRFVELMLVAADFVRNCGGLSEAKKALADAGSFIQHAGGAANAEKALSVLENLREKIG*
Ga0062590_1000902592	3300004157	Soil	MAKRAAVNQANSSGAEERFVELMLVAADFVRNCGGLEPAKKALADAGQFIERAKGVANAEKALGVLENLRERISV*
Ga0063356_1006634842	3300004463	Arabidopsis Thaliana Rhizosphere	MAKRAAEPKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKALSDAGQFIQQAGGVANADKALGVLESLKDKIGA*
Ga0063356_1007228922	3300004463	Arabidopsis Thaliana Rhizosphere	MAKKAAEPKPAVPQQEDRFVELMLVAAEFVKSCGGMQPARKALAETGQFIKAAGGVANAERALGVLESLKDKIG*
Ga0063356_1010810812	3300004463	Arabidopsis Thaliana Rhizosphere	MAKRAAAAAEPKPAANAPEESFVELMLVAADFAKCCGGLEQAKKSLDDAGQFITRAGGVAKASKALSVLENLKERIG*
Ga0063356_1024357652	3300004463	Arabidopsis Thaliana Rhizosphere	MAKRTAEVKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKSLADAGQFIQQAGGVANADKALGVLESLKDKIGA*
Ga0062591_1017618822	3300004643	Soil	MAKKAAEPKLTTPQPEDRFIELMLLAAEFVKCSGGMEQAKRSLSETGQFINSAGSLSNAEKALGVLESLKDRIG*
Ga0062591_1025790121	3300004643	Soil	MAKRSVEPKTSAAPAEDRFVELMLVAADFVRNCGGLAEAKKALSDAGSFIDRAGGVNNAEKALSVLENLREKIG*
Ga0062594_1006228331	3300005093	Soil	MAKRAAEPKPANPQAEDRFVELMLVAADFVKNCGGLSAAKKSLADAGQFIKQAGGVSNAEKALGVLESLKDKIGA*
Ga0066690_106971812	3300005177	Soil	MAKRAAAQQAPPPKAEDRFIELMLVAADFVRNCGGLEQAKKSLADAGQFIHQAGGVSSAEKALSVLE
Ga0065705_102061492	3300005294	Switchgrass Rhizosphere	MAKKAPEPKPAVPQQEDKFVELMLVAAEFVKGCGGMQAARKALAETGQFIKSAGGVANAEKALGVLESLKDKIG*
Ga0070690_1011733531	3300005330	Switchgrass Rhizosphere	MAKRAAEPKTAAPQPEDKFVELMLVAADFVKNCGGLTEAKKALADAGQFIQQAGGVANAEKALGVLENLKDKIA*
Ga0066388_1001853423	3300005332	Tropical Forest Soil	MAKRAAEPKPAAPQAEDRFVELMLVAADFVKSCGGLDSAKKALADAGQFIKQAGGVANAEKALGVLENLKDKIG*
Ga0066388_1005470051	3300005332	Tropical Forest Soil	MAKRAAEPKPAHPQAEDRFVELMLVAADFVKSCGGLSEAKKSLADAGQFIKQAGGVPNAEKALGVLESLKDKIGA*
Ga0066388_1009021973	3300005332	Tropical Forest Soil	MAKRVATPQPAAAQAEERFVELMLVAADFVKNSGGLEQAKKCLADAGQFIERAKGVSNAEKALSVLENLRDKIGA*
Ga0066388_1009419211	3300005332	Tropical Forest Soil	MAKRASANHAPASQPAEERFVELMLIAADFVKNCGGLEPAKKALADAGQFIQRAGGVASAEKALGVLENLRDKIGA*
Ga0070688_1016939952	3300005365	Switchgrass Rhizosphere	HLPCEIAPLDEPPESIMAKRAAAEPKPAAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALADAGQFIHRAGNVSNAEKALDVLESLREKIG*
Ga0070713_1009628322	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AAPQAPQPKAEDRFVELMLVTADFVKNCGGLEQAKKALADAGQFIHQAGGVSSAEKALNVLESLKEKIGS*
Ga0070663_1015017231	3300005455	Corn Rhizosphere	MAKRAAEPKPASPQAEDRFVELMLVAADFVKNCGGLSAAKKSLADAGQFIKQAGGVSNAEKALGVLESLKDKI
Ga0070741_102431403	3300005529	Surface Soil	MAKRAAESKPAAKPAGPQAEDRFVELMLVAADFVKNCGGLSEAKKALADAGQFIRQAGGVANAEKALGVLESLKDKIGA*
Ga0070665_1006595461	3300005548	Switchgrass Rhizosphere	MAKRTAESKPAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALADAGQFIHQAGSVANAEKAISVLENLREKIG*
Ga0068857_1018616702	3300005577	Corn Rhizosphere	MAKRAGSPQAVPAPNAEDRFVELMLVAADFVKNCGGLEQAQKALADAGQFIERAGSVSSAEKALSVLESLREKIGS*
Ga0070702_1006709771	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	PQAEDRFVELMLVAADFVKNCGGLSAAKKSLADAGQFIKQAGGVSNAEKALGVLESLKDKIGA*
Ga0066905_1009058892	3300005713	Tropical Forest Soil	MAKKVAEPKPAPSQPEDRFVELMLLAAEFVKSAGGLAQAKKSLAEAGQFIKAAGGVASAERALGVLENLKDKIGA*
Ga0066905_1009931981	3300005713	Tropical Forest Soil	MAKRAAATQTAAPQPAEERFVELMLVAADFVKNCGGLEPAKKALADAGQFIHRAGGVASAEKALGVLENLRDKIGA*
Ga0066905_1015702971	3300005713	Tropical Forest Soil	AKRAAEPKPPAPQAEDRFVELMLVAADFVKSCGGLDAAKKSLVDAGQFIKQAGGVSNAEKALGVLENLKDKIG*
Ga0066903_1011396022	3300005764	Tropical Forest Soil	MAKRAAGSHDSNDAEQRFVELMLAAADYVNSCGGLEQAKKSLADAGQFIELAKGVASAEKALGVLESLREKIGA*
Ga0066903_1029181302	3300005764	Tropical Forest Soil	MAKRAAEPKPANPQAEDRFVELMLVAADFVKSCGGLSEAKKSLADAGQFIKQAGGVPNAEKALGVLESLKDKIGA*
Ga0068863_1003731462	3300005841	Switchgrass Rhizosphere	MAKRAAEPKPTASQPEDKFVELMLVAADFAKSCGGLEAAKKSLSDTGLFIKQAGGVPNAERALRVLEDLKGKIG*
Ga0068862_1007019452	3300005844	Switchgrass Rhizosphere	MAKRAAEPKPAAPQAEDRFVELMLVAADFVKSCGSLNTAKKSLADAGQFIKHAGGVANAEKALGVLENLKDKIG*
Ga0068862_1018672062	3300005844	Switchgrass Rhizosphere	MAKRAAEPKPTASQPEDKFVELMLVAADFAKSCGGLEAAKKSLSDTGLFIKQAGGVPNAERALRVLEDLKGK
Ga0075364_101381324	3300006051	Populus Endosphere	MAKRAAAEPKHAAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALADAGQFIHRAGNVSNAEKALDVLESLREKIG*
Ga0079221_108444452	3300006804	Agricultural Soil	MAKRAAEPKPANPQAEDRFVELMLVAADFVKNCGGLEQAKKSLADAGQFIHQAGGVSSAEKALNVLESLKEKIGS*
Ga0075428_1000175628	3300006844	Populus Rhizosphere	MAKKAAAEPKPAASQPEDRFVELMLLAAEFVRSAGGLSQAKKSLAEAGQFIKAAGGVPSAERALGVLESLKDKIGS*
Ga0075428_1016864811	3300006844	Populus Rhizosphere	MAKRAIPETKTASLPPEEKFVELMLVAADFVKSCGSLDQAKKALSDAGSFIQQAGSVSNAGRALNVLESLRERIG*
Ga0075421_1010027502	3300006845	Populus Rhizosphere	MAKRAIPETKPASLPPEEKFVELMLVAADFVKSCGSLDQAKKALSDAGSFIQQAGSVSNAGRALNVLESLRERIG*
Ga0075425_1019182701	3300006854	Populus Rhizosphere	MAKRAAESKPSVPQPEDKFVALMLVAADFVKDCGGLEQAKKALADAGQFIQHAGGVSNANKALSVLESLKDKIG*
Ga0075424_1014302071	3300006904	Populus Rhizosphere	MAKRAAEPKTAAPQPEDKFVELMLVAADFVKNCGGLTEAKKSLADAGQFIQQAGGVANAEKALG
Ga0079218_132857622	3300007004	Agricultural Soil	SSTLHLLLELPMAKRAAEMKSTGRSSEEKPPEEKFIELMLVAADFVKSCGSLDQAKKSLTDAGNFIQQAGSAASAERALSVLESLKEKIG*
Ga0066710_1024753372	3300009012	Grasslands Soil	MAKRAAEPKPASSQPEDRFVELMLVAADFVKNCGSLAEAKKALADAGQFIKQAGGVANAEKALGVLESLKDKIGA
Ga0105250_106241781	3300009092	Switchgrass Rhizosphere	AEDRFVELMLVAADFVKSCGSLNTAKKSLADAGQFIKHAGGVANAEKALGVLENLKDKIG
Ga0105240_123717691	3300009093	Corn Rhizosphere	MMAKKAAADAKPAAPQPETAFVDLMLVAADFVRSSGGVEQARKALEEAGKFIDRAGNVAKASKAIDVLASLREKIEGQLVPLLLALL
Ga0105245_128777621	3300009098	Miscanthus Rhizosphere	LINIREIVMAKRAAESKTSVPPAEDRFVELMLVAADFVKNCGSLAEAKKALADAGSFIQHAGGTANAEKALSVLESLREKIG*
Ga0066709_1002182214	3300009137	Grasslands Soil	MAKRAAEPKPASSQPEDRFVELMLVAADFVKNCGSLAEAKKALADAGQFIKQAGGVANAEKALGVLESLKDKIGA*
Ga0066709_1015467202	3300009137	Grasslands Soil	MAKRAVPVPHDSHQAEERFVELMLVAADFVKNCGGLEQARKSLADAGQFIERAKGVSNAEKALSVLENLRDKIGA*
Ga0114129_108895191	3300009147	Populus Rhizosphere	AAAEPKPAASQPEDRFVELMLLAAEFVRSAGGLSQAKKSLAEAGQFIKAAGGVPSAERALGVLESLKDKIGS*
Ga0111538_123396782	3300009156	Populus Rhizosphere	MAKRAAEPKPVTQAPEEKFVELMLVAADFVRSSGSLEQAKKALTDAGNFIRQAGSVGNAERALGVLESLKEKIG*
Ga0075423_108502012	3300009162	Populus Rhizosphere	MAKRIAAPPASPPAEERFVELMLVAADFVKSCGGLEHAKKSLADAGQFIERANGVANAEKALSVLENLREKIGA*
Ga0075423_118504752	3300009162	Populus Rhizosphere	MAKRAPEPKPVTSQPEDKFVELMLVAADFVQSCGGLAQAKKAVADAGQFIKQAGGVANAEKALGVLENLKEKIGS*
Ga0105347_11784402	3300009609	Soil	MAKRTTESKPANSQPEDKFVELMLVAADFVQSCGGLSQAKKAVAEAGQFIKQAGGIPNAERALSVLENLKDKIGS*
Ga0105347_12970592	3300009609	Soil	MAKRAAEPKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKALADAGQFIQQAGGVANAGKALGVLESLKDKIGA*
Ga0105340_10269202	3300009610	Soil	MAKRASESKPATQAPEDKFVELMLVAADFIKTCGSLDQAKKSLIDAGTFIQRAGGVANAERALGVLESLKEKIG*
Ga0126305_112973901	3300010036	Serpentine Soil	MAKRAAPAAESKPAVNAPEENFVELMLVAADFVKCCGGLGQAKKSLDDAGQFITKAGGVAKATK
Ga0137422_11619681	3300011416	Soil	MAKRAAEPKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKALADAGQFIQQAGGVANAGKALGVLESLK
Ga0137428_10416132	3300011432	Soil	LPLEFTPFSADWEIIMAKRAAAEPKTAPPQAEDKFVELMLVAADFVKNCGGLAEAKKSLEDAGQFIQRAGGVANANKALGVLENLKDKIG*
Ga0137432_10074961	3300011439	Soil	MAKRAAESKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKALADAGQFIQQAGGVANAGKALGVLESLKDKIGA*
Ga0137432_10660722	3300011439	Soil	MAKKAAEPKPAAPQQEDRFVELMLVAAEFVKSCGGMTQARKALAETGQFIKAAGGVPSAEKALTVLESLKDKIG*
Ga0137427_100257973	3300011445	Soil	MAKRAAAEPKTAPPQAEDKFVELMLVAADFVKNCGGLAEAKKSLEDAGQFIQRAGGVANANKALGVLENLKDKIG*
Ga0137363_108575872	3300012202	Vadose Zone Soil	MAKRAAAAPQVTQLKAEDRFVELMLVAADFVKNCGGLEQAKKALADAGQFIQQAGGVANAEKALSVLESLKEKIGG*
Ga0150985_1105092851	3300012212	Avena Fatua Rhizosphere	QHHSDQHPGDFSMAKRSSESKPSAPPAEDRFVELMLVAADFVKNCGGLAEAKKSLSDAGSFIDRAGGVGNAEKALSVLENLREKIG*
Ga0150985_1108096232	3300012212	Avena Fatua Rhizosphere	MAKRTTESKPAVPAAEDRFVELMLVAADFVKNCGGLSEAKKALADAGQFIDRAGGVSNAEKALGVLESLKDKIG*
Ga0150985_1155100892	3300012212	Avena Fatua Rhizosphere	MAKRASAESKPASHAPEENFVELMLVAADFVRNCGGLQQAKKSLDDAGQFIDRAGGVAKASKALNVLESLKDRIGT*
Ga0150985_1185586103	3300012212	Avena Fatua Rhizosphere	DSVVVFLGAFPMAKRTAESKPAAPPAEDRFVELMLVAADFVKSCGGLTEAKKALTDAGQFIHHAGSVANAEKAISVLESLREKIG*
Ga0150984_1115179743	3300012469	Avena Fatua Rhizosphere	MAKRAAAAAESKPAVNAPEENFVELMLVAADFVKCCGGLEHAKKSLDDAGQFITKAGGVSKASKALSVLENLKERIG*
Ga0150984_1213960872	3300012469	Avena Fatua Rhizosphere	SISVSDSYRTLLINIREIVMAKRAAESKNSAPPAEDRFVELMLMAADFVKNCGGLTEARKALADAGSFIQHAGGSANAEKALTVLENLREKIG*
Ga0150984_1217003752	3300012469	Avena Fatua Rhizosphere	MAKRAAAESKPASHAPEESFVELMLVAADFVRNCGGLQQAKKSLDDAGQFIDRAGGVAKASKALNVLESLKDRIGT*
Ga0150984_1227948832	3300012469	Avena Fatua Rhizosphere	APLTITGVDDMAKRTAEPKPATPPAEDRFVELMLLAADFAKSCGGLTEAKKALADAGQFIHQAGSVANAEKAIGVLESLREKIG*
Ga0137397_100910193	3300012685	Vadose Zone Soil	MAKRAAALPDSNHAEERFVELMLVAADFVKNSGGLEQAKKSLADAGQFIERAKGVGNAERALSVLENLREKIGA*
Ga0164290_100018430	3300012921	Contaminated Culture	MAKKLAEPKPAAPAPPKPEERFVELMLVAADFVQSCGGLEPAKKALADAGKFVESAGGVGNATRALEVLENLKEKIGS*
Ga0137394_107736372	3300012922	Vadose Zone Soil	MAKRAAALPDSNHAEERFVELMLVAADFVKNSGGLEQAKKSLADAGQFIERAKGVGNAEKALSVLENLREKIGA*
Ga0137359_109090692	3300012923	Vadose Zone Soil	MAKRAAEPKSAAPKPNAPAAEDRFVELMLVAADFVKNCGGLTEAKKALADAGQFIGRAGGVSNAEKALGVLENLKDKIG*
Ga0137404_112063562	3300012929	Vadose Zone Soil	MAKRVAAQPKPAAPPAAEDRFVELMLVAADFVKNCGGLAAAKKSLADAGQFIQRAGGVANANKALSVLENLKDKIGG*
Ga0164241_112039731	3300012943	Soil	MAKRAAAAESKPAVNAPDESFVELMLVAADFVKCCGGLEPAKKSLDDAGQFITKAGGVSKASKALSVLENLKERIG
Ga0164307_105221572	3300012987	Soil	MLEIHMAKRAAEPKPAPSQAEDRFVELMLVAADFVKNCGGLSEAKKSLADAGQFIKQAGGVTNAEKALGVLESLKDKIGA*
Ga0164306_113797562	3300012988	Soil	FPGAFLMAKRAAETKPAAAPPAEDRFVELMLVAADFVKSCGGLTEAKKALTDAGEFIHHAGSVANAEKAIRVLESLREKIG*
Ga0164305_118893711	3300012989	Soil	MAKRAAESKTSVPPAEDRFVELMLVAADFVKNCGSLAEAKKALADAGSFIQHAGGTANAEKALSVLESLREKIG*
Ga0132258_105789142	3300015371	Arabidopsis Rhizosphere	MAKRAVAESKSSAPPAEDRFVALMLVAADFVKNCGGLSEAKKALADAGAFIQHAGGPANAEKALSVLENLREKIG*
Ga0132258_112702283	3300015371	Arabidopsis Rhizosphere	MAKRAAAAAAESKPAANAPEENFVELMLVAADFVKCCGGLEQAKKSLDDAGQFITRAGGVAKASKALSVLESLKERIG*
Ga0132258_127637272	3300015371	Arabidopsis Rhizosphere	MAKRASESKSPALQAEDRFIELMQVTADFVRNCGGLPEARKALADAGQFIDRAGGIPNAEKALGVLENLKEKLGT*
Ga0132258_135471811	3300015371	Arabidopsis Rhizosphere	MAKRAAESKPAAKPAGPQAEDRFVELMLVAADFVKSCGGLSEAKKALADAGQFIKQAGGVPNAEKALGVLESLKDKIGA*
Ga0132257_1016412711	3300015373	Arabidopsis Rhizosphere	MAKRAAAAETKSAPQPEENFVELMLVAADFVKSCGGLEQAKKALEDAGQFIDRAGGVAKASKALGVLESLKDRIG*
Ga0132255_1027166772	3300015374	Arabidopsis Rhizosphere	MAKRTAAAPQPAQPKAEDRFVELMLVAADFVKNCGGLEPAKKALADAGQFIHQAGGVANAEKALNVLESLKEKIA*
Ga0180217_10224133	3300017540	Compost	MAKKLAATSPAPSQPKPEERFVELMLVAADFVQSCGGLEPAKKALADAGKFVESAGSVESATRALEVLESLKQKIGT
Ga0184637_103004992	3300018063	Groundwater Sediment	MAKRAPESKPATQAPEEKFVELMLVAADFIKTCGSLEQAKKSLTDAGNFIQQAGGVTNAARALGVLENLKEKIG
Ga0184628_105936991	3300018083	Groundwater Sediment	KKAAEPKPAAAPQPEDKFVELMLDAAEFVKSCGGMQPARKALAETGQFIKAAGGVASAERALTVLESLKDKIG
Ga0184629_104389782	3300018084	Groundwater Sediment	MAKRASEPKPSAPQPEDKFVELMLVAADFVQSCGGLSQAKKAVAEAGQFIKQAGGIPNAERALSVLENLKDKIGS
Ga0190265_130739592	3300018422	Soil	MAKRTLEPKAPKAVPAPTSEDRFVELMIVGADFVKSCGGLEQAKKALADAGQFIGQAGGVKNAEKALGVLENLREKIGG
Ga0190270_116114592	3300018469	Soil	MAKRTSEPKAPKAAPAPAAEDRFVELMIVAADFVKNCGGLEQGKKSLASAGQFIRQAGGVTNAEKALGVLENLKGKIG
Ga0190274_114600582	3300018476	Soil	MAKKAAAESKAAPPQAEDKYVDLMLVAADYVKSCGGAEQAQKSLSAAGQFIARAGGVDQASKALSVLENLRERIGG
Ga0210380_100115284	3300021082	Groundwater Sediment	MAKKAAEPKPAAAPQPEDKFVELMLDAAEFVKSCGGMQPARKALAETGQFIKAAGGVASAERALTVLESLKDKIG
Ga0210380_100478982	3300021082	Groundwater Sediment	MAKRAPESKSPPQAEDKFVELMLVAADFVKNCGGLAAAKKSLADAGQFIQQAGGVANAGKALGVLESLKDKIGA
Ga0247794_101235782	3300024055	Soil	MAKKAAEPKPAASQPEDRFVELMLLAAEFVKCCGSLEQAKRSLAETGLFIKTAGGIANAEKALSVLESLKDKIG
Ga0207641_111560242	3300026088	Switchgrass Rhizosphere	MAKRAAEPKPTASQPEDKFVELMLVAADFAKSCGGLEAAKKSLSDTGLFIKQAGGVPNAERALRVLEDLKGKIG
Ga0207674_112121172	3300026116	Corn Rhizosphere	RAASPQAVPAPNAEDRFVELMLVAADFVKNCGGLEQAQKALADAGQFIERAGSVSSAEKALSVLESLREKIGS
Ga0208685_10343962	3300027513	Soil	MAKRTTESKPANSQPEDKFVELMLVAADFVQSCGGLSQAKKAVAEAGQFIKQAGGIPNAERALSVLENLKDKIGS
Ga0208185_10808411	3300027533	Soil	MAKRASESKPATQAPEDKFVELMLVAADFIKTCGSLDQAKKSLIDAGTFIQRAGGVANAERALGVLESLKEKIG
Ga0209382_116726661	3300027909	Populus Rhizosphere	MAKRAPESKPASQPPEEKFIELMLVAADFVKNCGSLEQAKKALGDAGDFIKHAGSVANAERALGVLENLKERIG
Ga0268266_105198492	3300028379	Switchgrass Rhizosphere	MAKRTAESKPAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALADAGQFIHQAGSVANAEKAISVLENLREKIG
Ga0268265_108740011	3300028380	Switchgrass Rhizosphere	MAKRAAEPKPAAPQAEDRFVELMLVAADFVKSCGSLNTAKKSLADAGQFIKHAGGVANAEKALGVLE
Ga0310813_102980732	3300031716	Soil	MAKRAAEPKPANPQAEDRFVELMLVAADFVKNCGGLSEAKKALADAGQFIKQAGGVSNAEKALGVLESLKDKIGA
Ga0310813_114673192	3300031716	Soil	MAKRTAESKTSPAPAEDRFVELMLVAADFVKSCGGLSEAKKALADAGSFIHRAGNVANAEKALSVLENLREKIG
Ga0310906_110769921	3300032013	Soil	MAKRAAAEPKPAAAPPAEDRFVELMLLAADFAKSCGGLAEAKKALSDAGQFIHRAGNVSNAEKALDVLESLREKIG
Ga0364925_0124023_596_868	3300034147	Sediment	LPLEFTPFSADWEIIMAKRAAAEPKTAPPQAEDKFVELMLVAADFVKNCGGLAEAKKSLEDAGQFIQRAGGVANANKALGVLENLKDKIG
Ga0364935_0024580_8_235	3300034151	Sediment	MAKRAAAEPKTAPPQAEDKFVELMLVAADFVKNCGGLAEAKKSLEDAGQFIQRAGGVANANKALGVLENLKDKIG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085354

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences