Sample 3300009796

Overview

Basic Information
IMG/M Taxon OID	3300009796 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0114663 \| Gp0127653 \| Ga0105086
Sample Name	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_0_10
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	38093636
Sequencing Scaffolds	24
Novel Protein Genes	26
Associated Families	25

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1
All Organisms → cellular organisms → Bacteria → Nitrospirae	5
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga → unclassified Candidatus Nitrotoga → Candidatus Nitrotoga sp. CP45	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1
Not Available	7
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1
All Organisms → cellular organisms → Archaea	3
All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1
All Organisms → cellular organisms → Bacteria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Groundwater Microbial Communities From The Columbia River, Washington, Usa
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand → Groundwater Microbial Communities From The Columbia River, Washington, Usa

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	freshwater river biome → river bed → sediment
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	USA: Columbia River, Washington
Coordinates	Lat. (^o)	46.372	Long. (^o)	-119.272	Alt. (m)	N/A	Depth (m)	N/A
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F004137	Metagenome / Metatranscriptome	451	Y
F005305	Metagenome / Metatranscriptome	405	N
F007831	Metagenome / Metatranscriptome	344	Y
F007886	Metagenome / Metatranscriptome	343	Y
F008161	Metagenome / Metatranscriptome	338	Y
F009436	Metagenome	318	Y
F009467	Metagenome	317	Y
F012359	Metagenome	281	Y
F012915	Metagenome / Metatranscriptome	276	Y
F013894	Metagenome	267	N
F015807	Metagenome / Metatranscriptome	252	Y
F018577	Metagenome	234	Y
F021258	Metagenome / Metatranscriptome	219	Y
F021408	Metagenome / Metatranscriptome	219	Y
F025366	Metagenome / Metatranscriptome	202	Y
F029045	Metagenome	189	Y
F037643	Metagenome / Metatranscriptome	167	Y
F055103	Metagenome / Metatranscriptome	139	Y
F055512	Metagenome / Metatranscriptome	138	Y
F067500	Metagenome	125	Y
F072619	Metagenome / Metatranscriptome	121	Y
F079840	Metagenome / Metatranscriptome	115	Y
F084286	Metagenome / Metatranscriptome	112	Y
F091213	Metagenome / Metatranscriptome	107	Y
F093898	Metagenome / Metatranscriptome	106	Y

Family

Category

Number of Sequences

3D Structure?

F004137

Metagenome / Metatranscriptome

451

F005305

Metagenome / Metatranscriptome

405

F007831

Metagenome / Metatranscriptome

344

F007886

Metagenome / Metatranscriptome

343

F008161

Metagenome / Metatranscriptome

338

F009436

Metagenome

318

F009467

Metagenome

317

F012359

Metagenome

281

F012915

Metagenome / Metatranscriptome

276

F013894

Metagenome

267

F015807

Metagenome / Metatranscriptome

252

F018577

Metagenome

234

F021258

Metagenome / Metatranscriptome

219

F021408

Metagenome / Metatranscriptome

219

F025366

Metagenome / Metatranscriptome

202

F029045

Metagenome

189

F037643

Metagenome / Metatranscriptome

167

F055103

Metagenome / Metatranscriptome

139

F055512

Metagenome / Metatranscriptome

138

F067500

Metagenome

125

F072619

Metagenome / Metatranscriptome

121

F079840

Metagenome / Metatranscriptome

115

F084286

Metagenome / Metatranscriptome

112

F091213

Metagenome / Metatranscriptome

107

F093898

Metagenome / Metatranscriptome

106

Scaffold	Taxonomy	Length	IMG/M Link
Ga0105086_100019	All Organisms → Viruses → Predicted Viral	4646	Open in IMG/M
Ga0105086_100725	All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium	1167	Open in IMG/M
Ga0105086_100766	All Organisms → cellular organisms → Bacteria → Nitrospirae	1153	Open in IMG/M
Ga0105086_100785	All Organisms → cellular organisms → Bacteria → Nitrospirae	1148	Open in IMG/M
Ga0105086_101103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga → unclassified Candidatus Nitrotoga → Candidatus Nitrotoga sp. CP45	1050	Open in IMG/M
Ga0105086_103320	All Organisms → cellular organisms → Bacteria → Nitrospirae	791	Open in IMG/M
Ga0105086_104419	All Organisms → cellular organisms → Bacteria → Nitrospirae	740	Open in IMG/M
Ga0105086_104501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	737	Open in IMG/M
Ga0105086_104935	All Organisms → cellular organisms → Bacteria → Nitrospirae	720	Open in IMG/M
Ga0105086_105898	Not Available	690	Open in IMG/M
Ga0105086_108439	Not Available	632	Open in IMG/M
Ga0105086_108616	Not Available	629	Open in IMG/M
Ga0105086_109989	Not Available	608	Open in IMG/M
Ga0105086_110602	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	600	Open in IMG/M
Ga0105086_110727	Not Available	598	Open in IMG/M
Ga0105086_114734	All Organisms → cellular organisms → Archaea	555	Open in IMG/M
Ga0105086_115802	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
Ga0105086_116772	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
Ga0105086_117098	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	536	Open in IMG/M
Ga0105086_118016	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
Ga0105086_118542	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
Ga0105086_118796	Not Available	525	Open in IMG/M
Ga0105086_119223	Not Available	523	Open in IMG/M
Ga0105086_119865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	519	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ga0105086_100019

All Organisms → Viruses → Predicted Viral

4646

Open in IMG/M

Ga0105086_100725

All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium

1167

Open in IMG/M

Ga0105086_100766

All Organisms → cellular organisms → Bacteria → Nitrospirae

1153

Open in IMG/M

Ga0105086_100785

All Organisms → cellular organisms → Bacteria → Nitrospirae

1148

Open in IMG/M

Ga0105086_101103

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Gallionellaceae → Candidatus Nitrotoga → unclassified Candidatus Nitrotoga → Candidatus Nitrotoga sp. CP45

1050

Open in IMG/M

Ga0105086_103320

All Organisms → cellular organisms → Bacteria → Nitrospirae

791

Open in IMG/M

Ga0105086_104419

All Organisms → cellular organisms → Bacteria → Nitrospirae

740

Open in IMG/M

Ga0105086_104501

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium

737

Open in IMG/M

Ga0105086_104935

All Organisms → cellular organisms → Bacteria → Nitrospirae

720

Open in IMG/M

Ga0105086_105898

Not Available

690

Open in IMG/M

Ga0105086_108439

Not Available

632

Open in IMG/M

Ga0105086_108616

Not Available

629

Open in IMG/M

Ga0105086_109989

Not Available

608

Open in IMG/M

Ga0105086_110602

All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.

600

Open in IMG/M

Ga0105086_110727

Not Available

598

Open in IMG/M

Ga0105086_114734

All Organisms → cellular organisms → Archaea

555

Open in IMG/M

Ga0105086_115802

All Organisms → cellular organisms → Archaea

546

Open in IMG/M

Ga0105086_116772

All Organisms → cellular organisms → Archaea

539

Open in IMG/M

Ga0105086_117098

All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae

536

Open in IMG/M

Ga0105086_118016

All Organisms → cellular organisms → Bacteria

530

Open in IMG/M

Ga0105086_118542

All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium

527

Open in IMG/M

Ga0105086_118796

Not Available

525

Open in IMG/M

Ga0105086_119223

Not Available

523

Open in IMG/M

Ga0105086_119865

All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes

519

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ga0105086_100019	Ga0105086_1000195	F084286	MAFNCGVSFGACMVRITKVDENGNVIAGDNSYVTDKPISISVNPNIETGNAFSVRNGCGCSISRRKFPDTFNWWELSLQTATLEPEMIAFMLGADTIDDGADVVGVAFPSALACEDANPAVAFEFWSEHVVGSGLDATYPYFHWVFPSSVWQIGDNTFEEGPAQPTLNAFTQTNGNWGDGPYGDGPPDSQDISEGGFWATADALPTAECAAQAVTATS*
Ga0105086_100725	Ga0105086_1007252	F055512	MKEINRSQSMALDDVQRGKLFGGSPVLRDLVGPRCAHCGSPRYFLVFRISGDGRNGILTGRCSRCRNPRELKADEIEQGYHV*
Ga0105086_100766	Ga0105086_1007662	F025366	LLMLLSTVTPRQARSNVEAWLIYFGIENIPPWLADKYTDTWVSWIAFVGFCVWAIHLYLRPNLRNGKLSVMIRAGEPWVQVDPGIDQSQASHTSGKLYTYRIALINSADSTLRNVEVKLMSLEKKPQNFHAMGSHLKLRHDQVGTTNFNVHPTKDSQFMDAVFVDVFKFFSGPEGSSFLHVMSLPEDMNRRIPVDKYDVKIIATSERGEMAVAEIAFVPRPDHIPDFRLLNMQSFPGATRSSS*
Ga0105086_100785	Ga0105086_1007852	F009436	MDLAHISSAAELLTIEHPHFGRIQPPGFLKTTIGTVTGTSRKAVVIADYSSGNRQTVAVQIDPRNFMITIASSFVLVTLKEGESRHSVIHKSWRLVKQRKGEGVEDFFGTVSMYVDSDGLKWEHRFDRTPDEDELIGFGSNGEEVLIITLESFYPTPAPGVSGVIISPTS*
Ga0105086_100785	Ga0105086_1007853	F007831	MNIFATIMFLLPLVLVTLYLYVSGVFTNRRAFQFTFYTLLTFFALIIGIGGVQLSSQGYDLPATAPVSLSEVLPEP*
Ga0105086_101103	Ga0105086_1011031	F093898	MMRFLLARAVNPQLSLLDGLRNWNHVASGLREGRRKRTYQH
Ga0105086_103320	Ga0105086_1033202	F008161	GFHALLIWMGAWHFLSKEAGEGSLLASDLFAGGLLGATALSLLRLSVGRHLLRFVALIGILLVLYHVWQGKAEWGSLTDVAIWAYTFYSFGPSSWRHALYSPLGVFEKLKT*
Ga0105086_104419	Ga0105086_1044191	F009467	RSKIFEALGASFFEAFEEEDLYTRIDLFQKLTQLSHGVTASWNTEDIVDKALDELLSEILTSKVALREFS*
Ga0105086_104501	Ga0105086_1045011	F015807	MERLMRHRGESRETDRPTWSHHRRFFGGQGACRDVGCERVEENHRVVINGSYPDR
Ga0105086_104935	Ga0105086_1049351	F021408	MKKTSIAIATICLLWAAVATVPTTEAATTFAGAIVGIDQTQRTITYQTEDGRTWTLPVTDSNILKQEQIAKGDRVRVEVEVSDDLSQRITKITKIPDQPRTKPTQSLNDVRP*
Ga0105086_105898	Ga0105086_1058981	F004137	MSASLILLGLVGWALGLLFVLALFRMSGEQDRAARHAQQRLHPYSDVTITRTATMRLR*
Ga0105086_107130	Ga0105086_1071302	F021258	FHQRRMQAPLGVTRLFDRMDFRAQIVRAQEIVGDPQSSRGVSF*
Ga0105086_108439	Ga0105086_1084391	F079840	KSTFKVKFTGIQEKVVFRCDVFLLEKIKNTLASQHLAGNYEYPNLSSFFRSALHACQHGMPLTYQRELSNPRKEVSFRLTGELMTFYGSLPLSSRTGIMERALGSYYYRVFG*
Ga0105086_108616	Ga0105086_1086161	F029045	MALLKFEPPKELAPLRVKIARPVHERVERYRQFCGALALADLVERALVYVVDHGPDFRAHEKGSATIRAKVEPRPNASRVSPVDQADGAP*
Ga0105086_109989	Ga0105086_1099891	F055103	MLAGRTTLASGLRGFWPVLAGHLGHARLANRMIYWLRRSSPTWLAQNDPENEGAKILLSRRVSSLRPFRVLMKYPG*
Ga0105086_110602	Ga0105086_1106021	F072619	MNLLSSLMFLMGVWLGENDHTRRITVQEIAPSDRTNLALGKKSRGRDGAEPLLHGSAIVIGVAEESLSTPATAEQECSEWRVFVLRSLCSQAKVQVVACRLCIPKVELHGLAFLNHVSDRDGSGLLIRSNEVPNEEVAPLEMTPMLIDHNAQ
Ga0105086_110727	Ga0105086_1107272	F091213	MGRETLGIESVGLSTPREKLRSGAGQNELAVDQVLANFVAELFATLHPATLPMLERMFEDVKQDAETDGEWELKRRAEIGIAAARIAAREQEAIEN*
Ga0105086_114734	Ga0105086_1147341	F005305	GPLIENFQNLVKDAKAKKLDSLREDEDFKKEFNQLSKDVIEPMMRKFESYLKCKDVNSSVNIQSQIVAGKNPSIEFSLHFKLTHESRYPNIKFSSSGKKISIQEERLMAKGEVRQDMMPEYYDNEQITEEFVKERLIRLIKSCFDKNWQSFYP*
Ga0105086_115802	Ga0105086_1158021	F067500	MVFQHKCYYCTTNGFNSTDEYEPHVVTRHPNLSGYQCPSDTTFYGLEKQGMPWERKMKNDIEWNQL
Ga0105086_116772	Ga0105086_1167721	F012359	LSIILDSLLLKTKEITKSKRGEPKTSSILLISAALIMAIILLMYAGISYTEEMMKQYSMCRDKIVGYGQHGMYPSAEEFKLALSFCD*
Ga0105086_117098	Ga0105086_1170981	F007886	AVLEVLEVVLDGVLAGADEGGAVGVVGVVDVVWSDALGAVSFFSVVAGVGASLPEEGFILSE*
Ga0105086_118016	Ga0105086_1180162	F037643	MGAAEIISLEEVHARKQWDTLRHQLHERFDQWLDTLETQWPEPPASLPEMTATVWDLRQQLTGGITEAIVAHVHRGEHDRTQGNCPRCDGVLRAQ
Ga0105086_118542	Ga0105086_1185421	F012915	VGVPPRGVMTIQRYGELGGRVGCIPTVLQVAMLHGMRQCLEELKKNGTEAAYFKNTPGIEDTRKWYANMGNVELKELEKKYGY*
Ga0105086_118796	Ga0105086_1187961	F013894	MTYQLEEPFFEDKGKITVQKEIGDNKTQMTFSSNGTFKGNIEVTNSGDLVSLSKGNKGTSAQGQGVVTTKDGSEEANYTFLQVGKAITKDGNPVLRGVGSAVWSTDSTDKLAF
Ga0105086_119223	Ga0105086_1192232	F055103	MLAAQDTLASGLRGFWLVVDGHLGHARLANRMIYWLRRSSPTWLAHNDPEIRVLMKYPG*
Ga0105086_119865	Ga0105086_1198651	F018577	CRRKMITILWTGVLAIGTIILIYKEMTALLYILATLGVTALLLVVAMADLSHAERLTNDPRRSEDSAAIGSGITSTFGAKQP*

Scaffold ID

Protein ID

Family

Sequence

Ga0105086_100019

Ga0105086_1000195

F084286

MAFNCGVSFGACMVRITKVDENGNVIAGDNSYVTDKPISISVNPNIETGNAFSVRNGCGCSISRRKFPDTFNWWELSLQTATLEPEMIAFMLGADTIDDGADVVGVAFPSALACEDANPAVAFEFWSEHVVGSGLDATYPYFHWVFPSSVWQIGDNTFEEGPAQPTLNAFTQTNGNWGDGPYGDGPPDSQDISEGGFWATADALPTAECAAQAVTATS*

Ga0105086_100725

Ga0105086_1007252

F055512

MKEINRSQSMALDDVQRGKLFGGSPVLRDLVGPRCAHCGSPRYFLVFRISGDGRNGILTGRCSRCRNPRELKADEIEQGYHV*

Ga0105086_100766

Ga0105086_1007662

F025366

LLMLLSTVTPRQARSNVEAWLIYFGIENIPPWLADKYTDTWVSWIAFVGFCVWAIHLYLRPNLRNGKLSVMIRAGEPWVQVDPGIDQSQASHTSGKLYTYRIALINSADSTLRNVEVKLMSLEKKPQNFHAMGSHLKLRHDQVGTTNFNVHPTKDSQFMDAVFVDVFKFFSGPEGSSFLHVMSLPEDMNRRIPVDKYDVKIIATSERGEMAVAEIAFVPRPDHIPDFRLLNMQSFPGATRSSS*

Ga0105086_100785

Ga0105086_1007852

F009436

MDLAHISSAAELLTIEHPHFGRIQPPGFLKTTIGTVTGTSRKAVVIADYSSGNRQTVAVQIDPRNFMITIASSFVLVTLKEGESRHSVIHKSWRLVKQRKGEGVEDFFGTVSMYVDSDGLKWEHRFDRTPDEDELIGFGSNGEEVLIITLESFYPTPAPGVSGVIISPTS*

Ga0105086_100785

Ga0105086_1007853

F007831

MNIFATIMFLLPLVLVTLYLYVSGVFTNRRAFQFTFYTLLTFFALIIGIGGVQLSSQGYDLPATAPVSLSEVLPEP*

Ga0105086_101103

Ga0105086_1011031

F093898

MMRFLLARAVNPQLSLLDGLRNWNHVASGLREGRRKRTYQH

Ga0105086_103320

Ga0105086_1033202

F008161

GFHALLIWMGAWHFLSKEAGEGSLLASDLFAGGLLGATALSLLRLSVGRHLLRFVALIGILLVLYHVWQGKAEWGSLTDVAIWAYTFYSFGPSSWRHALYSPLGVFEKLKT*

Ga0105086_104419

Ga0105086_1044191

F009467

RSKIFEALGASFFEAFEEEDLYTRIDLFQKLTQLSHGVTASWNTEDIVDKALDELLSEILTSKVALREFS*

Ga0105086_104501

Ga0105086_1045011

F015807

MERLMRHRGESRETDRPTWSHHRRFFGGQGACRDVGCERVEENHRVVINGSYPDR

Ga0105086_104935

Ga0105086_1049351

F021408

MKKTSIAIATICLLWAAVATVPTTEAATTFAGAIVGIDQTQRTITYQTEDGRTWTLPVTDSNILKQEQIAKGDRVRVEVEVSDDLSQRITKITKIPDQPRTKPTQSLNDVRP*

Ga0105086_105898

Ga0105086_1058981

F004137

MSASLILLGLVGWALGLLFVLALFRMSGEQDRAARHAQQRLHPYSDVTITRTATMRLR*

Ga0105086_107130

Ga0105086_1071302

F021258

FHQRRMQAPLGVTRLFDRMDFRAQIVRAQEIVGDPQSSRGVSF*

Ga0105086_108439

Ga0105086_1084391

F079840

KSTFKVKFTGIQEKVVFRCDVFLLEKIKNTLASQHLAGNYEYPNLSSFFRSALHACQHGMPLTYQRELSNPRKEVSFRLTGELMTFYGSLPLSSRTGIMERALGSYYYRVFG*

Ga0105086_108616

Ga0105086_1086161

F029045

MALLKFEPPKELAPLRVKIARPVHERVERYRQFCGALALADLVERALVYVVDHGPDFRAHEKGSATIRAKVEPRPNASRVSPVDQADGAP*

Ga0105086_109989

Ga0105086_1099891

F055103

MLAGRTTLASGLRGFWPVLAGHLGHARLANRMIYWLRRSSPTWLAQNDPENEGAKILLSRRVSSLRPFRVLMKYPG*

Ga0105086_110602

Ga0105086_1106021

F072619

MNLLSSLMFLMGVWLGENDHTRRITVQEIAPSDRTNLALGKKSRGRDGAEPLLHGSAIVIGVAEESLSTPATAEQECSEWRVFVLRSLCSQAKVQVVACRLCIPKVELHGLAFLNHVSDRDGSGLLIRSNEVPNEEVAPLEMTPMLIDHNAQ

Ga0105086_110727

Ga0105086_1107272

F091213

MGRETLGIESVGLSTPREKLRSGAGQNELAVDQVLANFVAELFATLHPATLPMLERMFEDVKQDAETDGEWELKRRAEIGIAAARIAAREQEAIEN*

Ga0105086_114734

Ga0105086_1147341

F005305

GPLIENFQNLVKDAKAKKLDSLREDEDFKKEFNQLSKDVIEPMMRKFESYLKCKDVNSSVNIQSQIVAGKNPSIEFSLHFKLTHESRYPNIKFSSSGKKISIQEERLMAKGEVRQDMMPEYYDNEQITEEFVKERLIRLIKSCFDKNWQSFYP*

Ga0105086_115802

Ga0105086_1158021

F067500

MVFQHKCYYCTTNGFNSTDEYEPHVVTRHPNLSGYQCPSDTTFYGLEKQGMPWERKMKNDIEWNQL

Ga0105086_116772

Ga0105086_1167721

F012359

LSIILDSLLLKTKEITKSKRGEPKTSSILLISAALIMAIILLMYAGISYTEEMMKQYSMCRDKIVGYGQHGMYPSAEEFKLALSFCD*

Ga0105086_117098

Ga0105086_1170981

F007886

AVLEVLEVVLDGVLAGADEGGAVGVVGVVDVVWSDALGAVSFFSVVAGVGASLPEEGFILSE*

Ga0105086_118016

Ga0105086_1180162

F037643

MGAAEIISLEEVHARKQWDTLRHQLHERFDQWLDTLETQWPEPPASLPEMTATVWDLRQQLTGGITEAIVAHVHRGEHDRTQGNCPRCDGVLRAQ

Ga0105086_118542

Ga0105086_1185421

F012915

VGVPPRGVMTIQRYGELGGRVGCIPTVLQVAMLHGMRQCLEELKKNGTEAAYFKNTPGIEDTRKWYANMGNVELKELEKKYGY*

Ga0105086_118796

Ga0105086_1187961

F013894

MTYQLEEPFFEDKGKITVQKEIGDNKTQMTFSSNGTFKGNIEVTNSGDLVSLSKGNKGTSAQGQGVVTTKDGSEEANYTFLQVGKAITKDGNPVLRGVGSAVWSTDSTDKLAF

Ga0105086_119223

Ga0105086_1192232

F055103

MLAAQDTLASGLRGFWLVVDGHLGHARLANRMIYWLRRSSPTWLAHNDPEIRVLMKYPG*

Ga0105086_119865

Ga0105086_1198651

F018577

CRRKMITILWTGVLAIGTIILIYKEMTALLYILATLGVTALLLVVAMADLSHAERLTNDPRRSEDSAAIGSGITSTFGAKQP*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300009796: Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_0_10

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences