3300002733: Coal-bed methane well microbial communities from Surat Basin, Queensland, Australia, Sample - Codie-8 produced water

Overview

Basic Information

• IMG/M Taxon OID: 3300002733
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0111352 | Gp0095097 | Ga0046457
• Sample Name: Coal-bed methane well microbial communities from Surat Basin, Queensland, Australia, Sample - Codie-8 produced water
• Sequencing Status: Permanent Draft
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 222237769
• Sequencing Scaffolds: 37
• Novel Protein Genes: 47
• Associated Families: 44

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	19
All Organisms → cellular organisms → Bacteria	4
All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. BA20m-p-22	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4
All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → Rauchvirus → Bordetella virus BPP1	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → unclassified Methyloversatilis → Methyloversatilis sp. XJ19-13	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Coal-Bed Methane Well Microbial Communities From Surat Basin, Queensland, Australia
• Type: Environmental
• Taxonomy: Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Coal-Bed Methane Well → Coal-Bed Methane Well Microbial Communities From Surat Basin, Queensland, Australia

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): Unclassified
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Australia: Tara, Queensland
• Coordinates
  • Lat. (^o): -27.0061
  • Long. (^o): 150.3916
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F001143	Metagenome / Metatranscriptome	766	Y
F002370	Metagenome / Metatranscriptome	566	Y
F002689	Metagenome / Metatranscriptome	536	Y
F002766	Metagenome / Metatranscriptome	531	Y
F003471	Metagenome / Metatranscriptome	485	Y
F006300	Metagenome	376	Y
F007521	Metagenome / Metatranscriptome	349	Y
F010100	Metagenome	308	Y
F012571	Metagenome	279	Y
F012773	Metagenome / Metatranscriptome	277	Y
F014256	Metagenome	264	Y
F014715	Metagenome / Metatranscriptome	260	Y
F016804	Metagenome	244	Y
F016940	Metagenome / Metatranscriptome	243	N
F017812	Metagenome / Metatranscriptome	238	Y
F020893	Metagenome	221	Y
F023579	Metagenome	209	N
F027166	Metagenome	195	N
F032942	Metagenome / Metatranscriptome	178	N
F033428	Metagenome	177	Y
F034165	Metagenome / Metatranscriptome	175	Y
F039115	Metagenome	164	N
F039532	Metagenome / Metatranscriptome	163	Y
F042306	Metagenome	158	Y
F047717	Metagenome	149	Y
F048276	Metagenome / Metatranscriptome	148	Y
F051082	Metagenome	144	Y
F051124	Metagenome	144	Y
F053141	Metagenome / Metatranscriptome	141	N
F054562	Metagenome	139	Y
F055662	Metagenome	138	Y
F061844	Metagenome	131	Y
F065714	Metagenome / Metatranscriptome	127	Y
F066718	Metagenome	126	Y
F069436	Metagenome	124	Y
F070999	Metagenome / Metatranscriptome	122	Y
F073483	Metagenome / Metatranscriptome	120	Y
F075836	Metagenome	118	Y
F077452	Metagenome	117	Y
F085645	Metagenome	111	Y
F091594	Metagenome / Metatranscriptome	107	Y
F097209	Metagenome / Metatranscriptome	104	N
F101123	Metagenome	102	N
F103228	Metagenome	101	N

Associated Scaffolds

Scaffold	Taxonomy	Length
codie8draft_1001393	Not Available	7120
codie8draft_1001638	Not Available	5772
codie8draft_1002065	Not Available	13806
codie8draft_1004320	Not Available	6761
codie8draft_1004322	All Organisms → cellular organisms → Bacteria	9837
codie8draft_1009509	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	7505
codie8draft_1011208	Not Available	717
codie8draft_1014686	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1560
codie8draft_1016094	Not Available	6987
codie8draft_1016330	Not Available	10847
codie8draft_1016931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3071
codie8draft_1019106	All Organisms → cellular organisms → Bacteria	5050
codie8draft_1020538	Not Available	5366
codie8draft_1022378	Not Available	7656
codie8draft_1024371	Not Available	540
codie8draft_1025683	Not Available	6323
codie8draft_1028098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. BA20m-p-22	556
codie8draft_1031577	Not Available	1912
codie8draft_1032042	Not Available	1239
codie8draft_1032276	Not Available	4300
codie8draft_1032841	Not Available	2361
codie8draft_1033261	All Organisms → cellular organisms → Bacteria	4589
codie8draft_1037158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1130
codie8draft_1040604	Not Available	660
codie8draft_1046829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	4062
codie8draft_1049593	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5719
codie8draft_1054396	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → Rauchvirus → Bordetella virus BPP1	1510
codie8draft_1056663	All Organisms → Viruses → Predicted Viral	2596
codie8draft_1058671	All Organisms → cellular organisms → Bacteria	1320
codie8draft_1062929	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	516
codie8draft_1067251	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	873
codie8draft_1083204	Not Available	730
codie8draft_1095056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Sterolibacteriaceae → Methyloversatilis → unclassified Methyloversatilis → Methyloversatilis sp. XJ19-13	670
codie8draft_1095297	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	574
codie8draft_1105570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554
codie8draft_1110961	Not Available	536
codie8draft_1115983	Not Available	516

Sequences

Scaffold ID	Protein ID	Family	Sequence
codie8draft_1001393	codie8draft_10013937	F007521	MAGRGMGCATRGGGAVGSGPANKMISETSKTSGPVLMKKGGAVNQHKRMAMGKKMMGGGMVKGYRKGGMCD*
codie8draft_1001638	codie8draft_10016386	F066718	MDAYMIDKTPNEKIALNEAVAAAGHYIEAIGVYDFLKFTPDQFDYLIEAIVTAYVESLQRQVVESEGIQFP*
codie8draft_1001638	codie8draft_10016388	F042306	MTKKKVPVIQMEDGKWYRVKGYTHTECCDCALVHKEQFRIVDGSLEWSAVRDDKMTEERRKELGIKLTRKKSA*
codie8draft_1002065	codie8draft_100206511	F101123	MNLNAIDALWNKMLVVYGSEWDKKFSGMPLDEVKGAWADELRGFTIDQIKYALTILPERAPNLIQFKELCSRSPKYFEQQQLTYRPQPNPEKMAAFRKVFAEEA*
codie8draft_1002065	codie8draft_100206528	F012773	MIGLLGPGKEMGKKGEALLDDDYSECPLATQDEIVNKGNKQKAILTANYGPSEGEQKCGNCEYGQKLKGCGLAKGEVFCEVFEFKCAEKNVCDAWDSYEEEEED*
codie8draft_1004320	codie8draft_100432015	F016804	MSKLKTLTIPNQYKVNAKAVLNEAIDEEPDTVIVLAFWKDRGQFKIKTSMVQDRLMMIGALEEAKNKVITDGYAE*
codie8draft_1004320	codie8draft_10043205	F002689	MTEATMSHTEARLQTHEEVCAFRYEQINARLKRLEGILMKTAGIMLVSMAGILWSVVYLR
codie8draft_1004322	codie8draft_10043221	F077452	MASLTNLNQIKKNVEAHLKSGDLELVVLPKVEYDALLEKLDDLKDIRDSAEALKEYRSGNYISFNRYNAGRKRKRV*
codie8draft_1009509	codie8draft_10095096	F010100	MDYDQDPQEEQLLDEQPLQEELAVLLNLPPLEKAKADIMRLTFLLLHWGQRIFSEVLNTNFSKSC*
codie8draft_1011208	codie8draft_10112081	F016940	VQNLVTPLLAQLEKARAGGPRNLRWGGNNVFWDVVVGRPSGATFSQNGYFPPDTTASERQANVGVVRAYTTRQIDGLAFVGTQSKEAAFTTIAKKTMEEIKDASSLLMQQALHNKADGVVAIVGTATDANTITVSAPYGLAGAGQGAL
codie8draft_1014686	codie8draft_10146862	F014256	MAHPAFMLVDGYKQLVTRLGLISGLNVTDDPRAIKLPCVLVEAPSIAMHTNVVAEMQFNVVVMVQGQGDNKSLMHLLELVDEIRNAQIGLVEARPTTRSYGGLDYPAYDLTISTKVAP*
codie8draft_1014686	codie8draft_10146863	F039115	GSSARHYVGGLTNLTVTATLLMEYSSTPGTYVDLTALVGTNVYCEVKVTSGTISATNPEFEITGAYFESLDVVNASLGELSEVEITLTGGTLVEDITPDT*
codie8draft_1016094	codie8draft_10160948	F070999	MDPVANSKSVVSLSAAAGVASAGTHTVAIDCLGFDTVSIDVGYRSIANTAAPSVVSVKHSDTDGSYGAISGLVQGTDYTVAGVANTATVNVTRFDLTTKDLKRYVQVAVTPSAEATSNASNNTVVVAARLGKAEQGPNTAAKAGVNVRVTK*
codie8draft_1016330	codie8draft_101633010	F051082	MNVSEFTCIALGMLFNVLTFILGVAVGVTLVRNRKDSKHDDRDRYEDEGFQYFSQN*
codie8draft_1016931	codie8draft_10169312	F061844	MAKYLVSGPFPVTGVQPGGHVDGSGIDNVELLIAAGILSPVAEEVKKPSMADKAGDK*
codie8draft_1019106	codie8draft_10191066	F051124	MTKTTDYIERYINSVGSGWCQKYVLISVVEDEEGDQSFFIQCSENQTAAETIGLCEAVSHIQKTKIAQAWISRENEEPDE*
codie8draft_1019106	codie8draft_10191067	F085645	MTNGSEILTEAHHLVNGPRQDAYSHPFDDYFKVKELFRMMTGIQLTVHHAVTFMICVKLARMATNMQRGDWHRDSVVDAAGYLACLSMVHEHTQNEISNTITRFKEDQ*
codie8draft_1020538	codie8draft_102053810	F069436	VTSETKDTLFGIMERWGFPTLVALGLAFFIRQDLLMPLLEEHRLTLKEVRETQREIATAVNEQTRLLIAIQSGKPVTGFRTVDVTEPDPGKN*
codie8draft_1020538	codie8draft_102053812	F075836	VLLVAFAGCVATLPSDATITADLACETARGIVQLRAQSAPRPDDQPKPGDKCEPCNGTGKLPTDGRVVVQCGACGGTGRVK*
codie8draft_1022378	codie8draft_10223785	F002766	MLDFAESVLKEIRKLRQDSESIVLNGTIADMERYRFMMGRLEGLRMVEDSVKSLLKKFSGNEDDL*
codie8draft_1024371	codie8draft_10243711	F002370	MKDMAKKAVHKHERSMHPGKPLTKMAKGGKTNLDMKKMGRNLAKVANQNRPMRSVPKSGI
codie8draft_1025683	codie8draft_102568316	F014715	MATKFKKGDEVKSIGVIPQGPVEALRMDEDGNFFYLISWTDAQGASQIRWFAEEDLAAA*
codie8draft_1028098	codie8draft_10280981	F017812	MAPLSRKAQLQQLSWQLLEDLAFCSGRWPRLAELAAQVLCEQQSAAPAVPVDPELEALLPF*
codie8draft_1031577	codie8draft_10315771	F053141	FTVYLAPHPDVLPDGLQCIIVGDQLTFGPAPLLWGKIPIVPIRDGSSDPSYFPRPVMEQWLDHQMRVNALLSKWVENIRVNAGGRFLTRPNSIATETFMGGVTSMIEVRGAGPLNESIVPVQGFSVGNDVKEALALEKTAFEDASGWNAVSRGQVTGESGRAIIASREQLERVFSPAVNALAQAYTDWCKVSMAGMAWGYDMPRALGAVGKSRPDLARAVSSDDFDGQSDVKVEPATLM
codie8draft_1032042	codie8draft_10320424	F073483	MTIETKDLRLLKTDYGHRIKAVEARVVRLEKRIDWVEKLLWLSAGAIISWLVTWVIRSV*
codie8draft_1032276	codie8draft_10322761	F048276	RTREEVARDHITRKEVDDKVERIVERFDDGFKRLEAKIDDLAKNQRGS*
codie8draft_1032276	codie8draft_10322769	F014715	MATKFKKGDGVKVIGVIPQGPVEALRMDEDGNFFYLISWTDAKGVEHNRWFAEEDLAAA*
codie8draft_1032841	codie8draft_10328414	F047717	PAESGLTLVAPGLLIKGAGTALVVRAFAATTNVITIHGYVNRVS*
codie8draft_1033261	codie8draft_10332614	F034165	MAVTLGKDVTITGVTNARSVSVTNSGNEVDVTKFGDTRRKMVKALIEQTVEVECVDVPGVDAGDTFTLAGTTTGAVKYVVTNVTRNDPIDGIRTFTVSATRYKSQT*
codie8draft_1037158	codie8draft_10371583	F001143	MSAWLIAVIGIVYAIVAFDLFINERIGLSIAFMGYAIGNVGLTLEALK*
codie8draft_1040604	codie8draft_10406042	F055662	MKTEYKFQIGDQVIWRGGWGSRAPVPAKIVDLGEKNDQPVYDLDNGHWAYEHQLEVA*
codie8draft_1045476	codie8draft_10454763	F023579	MCLPGAIGDNGQSFGLMQINDFWCTPSKYWPRGYLQTQGMLDDCVELLDPLTNLHIAWHIATKHGWHNWTTHRRLP*
codie8draft_1046829	codie8draft_10468292	F065714	MKLFRRLLLVLSVATAVVGILRFGGSEKSRVTTKQGGWRNYSSPE*
codie8draft_1049593	codie8draft_10495938	F003471	MEQKKPKPVPVPNTAGYPNNVPNTQTVKTRGCGAATKGCNSSKTLA*
codie8draft_1054396	codie8draft_10543961	F097209	MTTIAARFSTREIAADSMCSGDDSFYLVEKLRKGKNSIYGGCGDWDKILKMFQALESGGDLD
codie8draft_1056663	codie8draft_10566633	F020893	MPTEIYVALISALGIITAAGLPAYLIERSRKENATDHAKVTKVLRRVEHKIDQHLEDHGNGTTRRNSSEAKSNARH*
codie8draft_1056663	codie8draft_10566635	F006300	MKWQYVLEDWAKAFVAGSVAVLMTGEYDLTGALKAGLAATLPLIYAWANTKDPRYGRH*
codie8draft_1056663	codie8draft_10566638	F103228	LSTQTAGDTLAANLLAKYKDPVVRFNEMTVILNGLNDTDAQAVSTLDIGDLVEITKTYTTGSPTTVTKTMYVENIQHEITPGFHRIRLGLGQAQLLTPFILDTSKLDDVTVGLG*
codie8draft_1058671	codie8draft_10586712	F075836	VRFVLAFLVVMAGCVATLPDDATVTADLACETARAVVQMRSASVPTPDNKPKPGDKCPNCDGRGYVGDGTVRVKCQPCDGTGKVK*
codie8draft_1062929	codie8draft_10629292	F054562	RLVQVAAVQGVGLVRVAWSATWSEYQVRAVGPGGRLVAEYHTDDKGDALATADRMLAEMAELAGMPA*
codie8draft_1067251	codie8draft_10672513	F027166	IHTGFFTDQNDIIRFEATNDNTAYKTSETQTIIGDGPNLNSPGHIEVRNNSNQWVLSEIGWKVGNTGDAKNISQLLANEQIKGQLKPVRKFMQTSFVMNDPDNDFLQPHYAISYNGSYWVFHGGTYDLYRDTVNGIWWQIKVD*
codie8draft_1083204	codie8draft_10832041	F033428	KVTRQNEGTLVNEIHVNRLKKRFAAITPKCRATIQEIADEAGGTISMNRPTERRVGIARILLEIAENEKHIDKDLVRSLCELRTGKKYNNAGEALADLSWIDAERVWASTQDIYSGRVQLEYIPTSNHYIITKEKTHV*
codie8draft_1095056	codie8draft_10950562	F091594	MSENGITHYCLGNGEPKCDGCKQEKNWQALNQMPDTLRKALQAQAQRIDDTDCILSGRPWYVGA*
codie8draft_1095297	codie8draft_10952971	F012571	MADNIKNPDDVIGVCSECKSDQPMNYMYNNSFAQQGLAVPCKYCGGVVVITYRETRDKSLNSSDRDRGIS*
codie8draft_1105570	codie8draft_11055702	F066718	VKRARARFCSMQCMDSYMIDKSPNEQAALNDAAAAAGHFIEASGVYNFLEFNPDQFDQFIEAIVTAYVDSLQQQRVDTEGVRFL*
codie8draft_1110961	codie8draft_11109612	F039532	MSNPSYFDYLPDDGDFTEDDLWEAIAEANGLDVSEIMDGDLVDYL*
codie8draft_1115983	codie8draft_11159831	F032942	MTTIAAKFSSREIAADSMVSGDDSFYLDEKLRVGKNSIYGACGDWDKCLKMFQTLESSGDLDSDIDVTVLELRNDGIWIYESTIIPAKIKNDFWAIGTGANFAIAAMECGKSVREAVEIACKYDTSSHLPIDYMKLGRSRGNKNIR*