NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F106182

Metagenome / Metatranscriptome Family F106182

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F106182
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 110 residues
Representative Sequence MKWMDTLFAWALVVLGSAHFLAAWVPKLSLLRGPWAGGAAVAIVSMGLMNAVRSQRTGDAFLRWSTAVVTALTAGLCLPVLYRFSGNVLHQPAALATGVLAVFELLFAVAG
Number of Associated Samples 62
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 88.00 %
% of genes near scaffold ends (potentially truncated) 23.00 %
% of genes from short scaffolds (< 2000 bps) 65.00 %
Associated GOLD sequencing projects 62
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog
(22.000 % of family members)
Environment Ontology (ENVO) Unclassified
(55.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(37.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 66.91%    β-sheet: 0.00%    Coil/Unstructured: 33.09%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF02594DUF167 36.00
PF01168Ala_racemase_N 26.00
PF08713DNA_alkylation 6.00
PF00474SSF 5.00
PF01794Ferric_reduct 2.00
PF01184Gpr1_Fun34_YaaH 2.00
PF14279HNH_5 2.00
PF13193AMP-binding_C 1.00
PF05345He_PIG 1.00
PF01012ETF 1.00
PF00691OmpA 1.00
PF03852Vsr 1.00
PF14559TPR_19 1.00
PF05015HigB-like_toxin 1.00
PF13646HEAT_2 1.00
PF00903Glyoxalase 1.00
PF00232Glyco_hydro_1 1.00
PF08281Sigma70_r4_2 1.00
PF01734Patatin 1.00
PF02812ELFV_dehydrog_N 1.00
PF02729OTCace_N 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG1872Uncharacterized conserved protein YggU, UPF0235/DUF167 familyFunction unknown [S] 36.00
COG49123-methyladenine DNA glycosylase AlkDReplication, recombination and repair [L] 6.00
COG1584Succinate-acetate transporter SatPEnergy production and conversion [C] 2.00
COG0334Glutamate dehydrogenase/leucine dehydrogenaseAmino acid transport and metabolism [E] 1.00
COG1752Predicted acylesterase/phospholipase RssA, containd patatin domainGeneral function prediction only [R] 1.00
COG2025Electron transfer flavoprotein, alpha subunit FixBEnergy production and conversion [C] 1.00
COG2086Electron transfer flavoprotein, alpha and beta subunitsEnergy production and conversion [C] 1.00
COG2723Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidaseCarbohydrate transport and metabolism [G] 1.00
COG3549Plasmid maintenance system killer proteinDefense mechanisms [V] 1.00
COG3621Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotRGeneral function prediction only [R] 1.00
COG3727G:T-mismatch repair DNA endonuclease Vsr, very short patch repair proteinReplication, recombination and repair [L] 1.00
COG4667Predicted phospholipase, patatin/cPLA2 familyLipid transport and metabolism [I] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459015|G14TP7Y02G4A4LAll Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300004628|Ga0070399_1001542All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter23793Open in IMG/M
3300009665|Ga0116135_1043334All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1554Open in IMG/M
3300009759|Ga0116101_1109533All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300012204|Ga0137374_10784429All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium708Open in IMG/M
3300012204|Ga0137374_10853073All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium672Open in IMG/M
3300012206|Ga0137380_10317558All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1393Open in IMG/M
3300012209|Ga0137379_10946697All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300012350|Ga0137372_10194552All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1627Open in IMG/M
3300012353|Ga0137367_10211178All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1404Open in IMG/M
3300012357|Ga0137384_11510765All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300012532|Ga0137373_10100883All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2524Open in IMG/M
3300012886|Ga0160425_1055696All Organisms → cellular organisms → Bacteria1143Open in IMG/M
3300014160|Ga0181517_10119181All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1515Open in IMG/M
3300014160|Ga0181517_10154062All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1288Open in IMG/M
3300014160|Ga0181517_10356147All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium758Open in IMG/M
3300014167|Ga0181528_10000243All Organisms → cellular organisms → Bacteria47446Open in IMG/M
3300014167|Ga0181528_10000586All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae25326Open in IMG/M
3300014167|Ga0181528_10001154All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis16643Open in IMG/M
3300014167|Ga0181528_10675389All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium576Open in IMG/M
3300014169|Ga0181531_10003405All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis9757Open in IMG/M
3300014169|Ga0181531_10325944All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae941Open in IMG/M
3300014199|Ga0181535_10577567All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium646Open in IMG/M
3300014201|Ga0181537_10003193All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis14123Open in IMG/M
3300014491|Ga0182014_10042374All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3271Open in IMG/M
3300014491|Ga0182014_10328217All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium778Open in IMG/M
3300014492|Ga0182013_10466595All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium664Open in IMG/M
3300014493|Ga0182016_10007594All Organisms → cellular organisms → Bacteria11121Open in IMG/M
3300014493|Ga0182016_10119114All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1832Open in IMG/M
3300014493|Ga0182016_10204222All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1273Open in IMG/M
3300014493|Ga0182016_10445195All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis758Open in IMG/M
3300014654|Ga0181525_10414911All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300014655|Ga0181516_10008955All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5687Open in IMG/M
3300014655|Ga0181516_10042249All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2313Open in IMG/M
3300014655|Ga0181516_10073243All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1727Open in IMG/M
3300014655|Ga0181516_10188828All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1045Open in IMG/M
3300014655|Ga0181516_10353733All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium748Open in IMG/M
3300014657|Ga0181522_10108826All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1605Open in IMG/M
3300014658|Ga0181519_10313410All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium973Open in IMG/M
3300014838|Ga0182030_10002966All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis36161Open in IMG/M
3300014838|Ga0182030_10558575All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1119Open in IMG/M
3300014838|Ga0182030_11046718All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium713Open in IMG/M
3300016722|Ga0183100_1051971All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300017948|Ga0187847_10035174All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2949Open in IMG/M
3300017988|Ga0181520_10000160All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae138765Open in IMG/M
3300017988|Ga0181520_10012612All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae10826Open in IMG/M
3300017988|Ga0181520_10450984All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300018042|Ga0187871_10778454All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300018042|Ga0187871_10802813All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300018043|Ga0187887_10048574All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2614Open in IMG/M
3300019256|Ga0181508_1575415All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300022861|Ga0224528_1000188All Organisms → cellular organisms → Bacteria52061Open in IMG/M
3300022861|Ga0224528_1039803All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae848Open in IMG/M
3300022877|Ga0224527_1001864All Organisms → cellular organisms → Bacteria9681Open in IMG/M
3300023091|Ga0224559_1023453All Organisms → cellular organisms → Bacteria2590Open in IMG/M
3300023091|Ga0224559_1034346All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2070Open in IMG/M
3300023247|Ga0224529_1070030All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium551Open in IMG/M
(restricted) 3300028024|Ga0255336_101656All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis14493Open in IMG/M
3300028565|Ga0302145_10253535All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium584Open in IMG/M
3300028745|Ga0302267_10060500All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2047Open in IMG/M
3300028813|Ga0302157_10574537All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300028866|Ga0302278_10081637All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1860Open in IMG/M
3300028909|Ga0302200_10587972All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300029908|Ga0311341_10192474All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1275Open in IMG/M
3300029922|Ga0311363_10509260All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1221Open in IMG/M
3300029982|Ga0302277_1173363All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium864Open in IMG/M
3300030011|Ga0302270_10081765All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2095Open in IMG/M
3300030518|Ga0302275_10097462All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1980Open in IMG/M
3300031258|Ga0302318_10149351All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1092Open in IMG/M
3300031258|Ga0302318_10307981All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300031524|Ga0302320_10943386All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae926Open in IMG/M
3300031759|Ga0316219_1007281All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis7114Open in IMG/M
3300031759|Ga0316219_1147226All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium873Open in IMG/M
3300031813|Ga0316217_10001535All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae29681Open in IMG/M
3300031813|Ga0316217_10010465All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis8078Open in IMG/M
3300031813|Ga0316217_10289457All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300032560|Ga0316223_1172328All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium707Open in IMG/M
3300032605|Ga0316232_1160652All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium938Open in IMG/M
3300032892|Ga0335081_10951175All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1007Open in IMG/M
3300032892|Ga0335081_12102542All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium598Open in IMG/M
3300033402|Ga0326728_10084080All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4038Open in IMG/M
3300033402|Ga0326728_10091487All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3770Open in IMG/M
3300033402|Ga0326728_10289262All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1509Open in IMG/M
3300033405|Ga0326727_10020493All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae13123Open in IMG/M
3300033561|Ga0371490_1155595All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300033888|Ga0334792_007100All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4790Open in IMG/M
3300034124|Ga0370483_0000081All Organisms → cellular organisms → Bacteria → Acidobacteria28693Open in IMG/M
3300034124|Ga0370483_0219856All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300034130|Ga0370494_071105All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium877Open in IMG/M
3300034130|Ga0370494_116507All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium679Open in IMG/M
3300034163|Ga0370515_0000839All Organisms → cellular organisms → Bacteria14784Open in IMG/M
3300034163|Ga0370515_0000917All Organisms → cellular organisms → Bacteria14343Open in IMG/M
3300034163|Ga0370515_0037325All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2176Open in IMG/M
3300034163|Ga0370515_0101098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1244Open in IMG/M
3300034163|Ga0370515_0453157All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300034199|Ga0370514_042941All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1131Open in IMG/M
3300034199|Ga0370514_050585All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1043Open in IMG/M
3300034282|Ga0370492_0031100All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2194Open in IMG/M
3300034282|Ga0370492_0044801All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1818Open in IMG/M
3300034282|Ga0370492_0401338All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog22.00%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil14.00%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog12.00%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog10.00%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater7.00%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil7.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland5.00%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil5.00%
BioreactorEngineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Bioreactor3.00%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.00%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.00%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil1.00%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen1.00%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter1.00%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459015Litter degradation PV4EngineeredOpen in IMG/M
3300004628Microbial communities from bioreactor (seeded with sewage sludge) at LBNL, California, USA - Biofuel metagenome 4 (version 1)EngineeredOpen in IMG/M
3300009665Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10EnvironmentalOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012886Microbial communities from bioreactor (seeded with sewage sludge) at Lawrence Berkeley National Lab, California, USA - Biofuel Metagenome 8 (Illumina Assembly)EngineeredOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014167Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014199Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaGEnvironmentalOpen in IMG/M
3300014201Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaGEnvironmentalOpen in IMG/M
3300014491Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300014658Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016722Microbial communities from bioreactor (seeded with anoxic lake sediment) at LBNL, California, USA - Biofuel metagenome 2EngineeredOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300019256Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022861Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T25EnvironmentalOpen in IMG/M
3300022877Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T0EnvironmentalOpen in IMG/M
3300023091Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 30-34EnvironmentalOpen in IMG/M
3300023247Peat soil microbial communities from Stordalen Mire, Sweden - C.B.S.T50EnvironmentalOpen in IMG/M
3300028024 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - MeOH1_35cm_T3_179EnvironmentalOpen in IMG/M
3300028565Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3EnvironmentalOpen in IMG/M
3300028745Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3EnvironmentalOpen in IMG/M
3300028813Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3EnvironmentalOpen in IMG/M
3300028866Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2EnvironmentalOpen in IMG/M
3300028909Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1EnvironmentalOpen in IMG/M
3300029908II_Bog_E1 coassemblyEnvironmentalOpen in IMG/M
3300029922III_Fen_E1 coassemblyEnvironmentalOpen in IMG/M
3300029982Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1EnvironmentalOpen in IMG/M
3300030011Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3EnvironmentalOpen in IMG/M
3300030518Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2EnvironmentalOpen in IMG/M
3300031258Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1EnvironmentalOpen in IMG/M
3300031524Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3EnvironmentalOpen in IMG/M
3300031759Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003PEnvironmentalOpen in IMG/M
3300031813Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoAEnvironmentalOpen in IMG/M
3300032560Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009EnvironmentalOpen in IMG/M
3300032605Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300033402Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MNEnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M
3300033561Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB28FN SIP fractionEnvironmentalOpen in IMG/M
3300033888Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-3-X1EnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M
3300034130Peat soil microbial communities from wetlands in Alaska, United States - Collapse_03_16EnvironmentalOpen in IMG/M
3300034163Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14EnvironmentalOpen in IMG/M
3300034199Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14EnvironmentalOpen in IMG/M
3300034282Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
4PV_030580302170459015Switchgrass, Maize And Mischanthus LitterVVLGSAHFLAAYVPKLSVLQGPWAGGAAVAIISMGLMNAVRSHRRGDAFLRWCTVAATALTTWVCLSVLYHYSGNVLHRPAALATGVFALCELLFAVMG
Ga0070399_1001542263300004628BioreactorMKWMDRLFAWMLVALGGAHLLALWIPKLGLLRGPWTGGAAVAIISAGLMNAVRSRRKSDRFLRWCTALATLLTAAMCLITLYRFSGNVLHQPAALAISVLAVVELFFCVAR*
Ga0116135_104333413300009665PeatlandMKMKWLDALFAWSLVLLGSAHCLAAWIPKLSLLRGPWAGGTAVAIITMGLMNAVRSQRRSDAFLRWSTAAVTALTAGLCLLMLYRFPGNVLHQPAALATGVLAVVELFFTVAG*
Ga0116101_110953313300009759PeatlandMKWLDALFAWALALLGAAHILSSWIPKLIMLRGPWEGGAAVAIVSMGLMNAVRSQRKSDRFLRWSTAAVTGLTAALCLRVLYHLSSNVFHQPAALATGLLAVVELLFAVVG*
Ga0137374_1078442913300012204Vadose Zone SoilMRWADAVCAWALVVLGATHFLVAYVPKLGLLEGPWAGGAAVAIISMGLMNAVRSQRRGDQFLRWSTAAATALTTWVCLSVLYHYSANVLHRPAALATGVLALIELLFCVAG*
Ga0137374_1085307323300012204Vadose Zone SoilMRWADAVCAWALVVLGATHFLVAYVPKLSLLEGPWAGGSAVAIITMGLMNAVRSQRKSDQFLRWSTLAATALTTWVCLSVLYHYSGNVLHRPAALATGLLALVELLFCVVG*
Ga0137380_1031755833300012206Vadose Zone SoilMKWMDALFAWALVLLGGAHFLAAWIPKLAVLRGPWTGGAAVAIVSMGLMNAVRSQRKNDRFLGWTTAVVTALAGAMCIGVLYHFPGNVLHQPAALATGVLAVFELFFTLAR*
Ga0137379_1094669713300012209Vadose Zone SoilDRGGFDLRKGGDSYLWSATIRRAIRGACPMKWIDTLFAWVLVLLGAAHFLAAWIPKLAVLRGPWTGGAAVAIIAMGLMNAVRSQRKNDRFLVWTTAVVTALAGAMCLGVLYHFPGNVLHQPAALATGVLAVFELFFALAG*
Ga0137372_1019455233300012350Vadose Zone SoilMRWGDAVCAWALVVLGATHFLVAYVPKLSLLEGPWAGGAAVAIISMGLMNAVRSQRRGDQFLRWSTAAATALTTWVCLSVLYRYSANVLHRPAALATGVLALIELLFCVVG*
Ga0137367_1021117813300012353Vadose Zone SoilMRWADAVCAWALVVLGATHFLVAYVPKLSLLEGPWAGGAAVAIISMGLMNAVRSQRRGDQFLRWSTAAATALTTWVCLSVLYHYSANVLHRPAALATGVLALIELLFCVAG*
Ga0137384_1151076513300012357Vadose Zone SoilRWADPVCAWALVVLGATHFLVAYVPKLGLLQGPWAGGAAVAIVSMGLMNAVRSQRRGDQFLRWSTAAATALTTWVCHSVLYHYSGNVLHRPAALATGVLALIELLFCVVP*
Ga0137373_1010088323300012532Vadose Zone SoilMRWADAVCAWALVVLGATHFLIAYVPKLSLLEGPWAGGAAVAIISMGLMNAVRSQRRGDQFLRWSTAAATALTTWVCLSVLYRYSANVLHRPAALATGVLALIELLFCVAG*
Ga0160425_105569623300012886BioreactorMKWMDRLFAWMLVALGGAHLLALWIPKLGLLRGPWTGGAAVAIISAGLMNAVRSRRKSDRFLRWCTALATLLTAAMCLITLYRFSGNVLHQPAALAISVLAVVEL
Ga0181517_1011918133300014160BogMKWLDALFAWALVLLGAAHFLAAWIPKLGLLRGPWAGGAAVAIVSMGLMNAVRSQRKSDRFLRWSTVLVTTLTAALCLRVLYQFSGNVLHQPAALATGAFAVIELFFALMG*
Ga0181517_1015406223300014160BogMKWMDALAAWALVVLGSAQFLAAWIPKLSLVRGPWTGGAAVAIVSMGLMNAVRAQRKSDSFLRWSTVVVTALTAGLCLTVLYRFPGNVLHQPAALATGLLAMLELFFALAG*
Ga0181517_1035614723300014160BogMKWMDTSFAWAIVLLGSAHFLAAYVPKLTHLRGPWAEGAAVAIITMGLMNAVRSQHRGDHFLRWTTVLTTALTAGLCLRVLYQFQGNVLHQPAALAVGALAMAEFCFSVVG*
Ga0181528_10000243263300014167BogMKWIDALCAWLLVILGSAHFLAAYVPKLSLLRCPWMGGTAIAIISIGLMNAVRSQRKSDRFLRWNTAAATALTTALCMKVLYQFPGNVLHQPAALATAVLAVIELVFTVAG*
Ga0181528_10000586103300014167BogMKWIDTLFAWALVLLGSAHFLAAYVPKLSVLLGPWSGSAAVAIVTMGLMNAVRSQHRGDSFLRWATAAATGLTAGLCLGVLYQFQGNVLHQPAALAVGALALIEVFFAVAG*
Ga0181528_10001154133300014167BogMKWIDALCAWALVVFGSAHFLAAYVPKLSLLRGPWMGGAAVAIVTIGLMNAVRSQRRSDRFLRWTTAAATALTAALCMKVLYQFQGNVLHQPAALAAGVLALVELFFSVMG*
Ga0181528_1067538923300014167BogMKWLDALFAWALVILGSAQFLAAWVPKLSLLRGPWAGGAAVAIVSMGLMNAVRTQRKSDAFLRWSTVVVTALTAGLCLTVLYRFSGNVLHQPAALATSVLAVFELFFAVAG*
Ga0181531_1000340513300014169BogMKWIDTSFAWAIVLLGSAHFLAAYVPKLTHLRGPWAEGAAVAIITMGLMNAVRSQHRGDHFLRWATVLTTALTAGLCLRVLYQFQGNVLHQPAALAV
Ga0181531_1032594423300014169BogMKWMDALAAWALVVLGSAQFLAAWIPKLSLVRGPWTGGAAVAIVSMGLMNAVRAQRKSDSFLRWSTVVVTVLTAGLCLTVLYRFPGNVLHQPAALATGLLAVFELFFALAG*
Ga0181535_1057756723300014199BogMKWIDALFAWALVLLGAAHFLAAYVPKLGMLRGPWADGAAVAIVSMGLMNAVRSQRKSDALLRWSTAFATALTAAMCLKTLYQFSGNVLHQPAALATGLLVVLELFFCVAG*
Ga0181537_1000319373300014201BogMKWIDTLFAWALVLLGSAHFLSAYVPKLAMLRGPWTEGAMVAIVTMGLMNAVRSQHRGDHFLRWTTVVATALTAALCLRVLYQFQGNVLHQPAALAVGALAVVELLLGVMG*
Ga0182014_1004237433300014491BogMMKWLDALFAWALVLLGLAHMLATWVPKLSLFRGPWAAGVVVAIVTMGLMNAVRSQRRSDRLLRWSTAAATALTAALCLKVLYQFSGNVLHQPAALAVAALALAELFFGLVG*
Ga0182014_1032821723300014491BogMKMKWIDTLCAWLLVILGSAHFLAAYIPKLSLLRCPWMGGTAIAIISIGLMNAVRSQRKSDRFLRWNTAAATALTTALCMKVLYQFPGNVLHQPAALATAVLAAIELVFAVAG*
Ga0182013_1046659513300014492BogFLAAYIPKLSLLRCPWMGGTAIAIISIGLMNAVRSQRKSDRFLRWNTAAATALTTALCMKVLYQFPGNVLHQPAALATAVLAAIELVFAVAG*
Ga0182016_10007594113300014493BogMKWIDTLFAWALVLLGSSHFLAAYVPKLSVLRGPWEGGAVAAIVTMGLMNAVRSQRRSDRFLRWSTAAATALTAGLCMKVLYQFQGNALHQPAALAVGALALVELFFAVAG*
Ga0182016_1011911423300014493BogMNLLDAVFAWGLVLLGSSHFLAAWVPRLGVLRGPWTAGAAVALVSMGLMNAVRSQRPSDYFLRWCTALATAGTAGLCLPVIYHLPGNPLHQPAALATAVCIVFELFCSVAG*
Ga0182016_1020422223300014493BogMNLLDAVFAWALVLLGSAHFLAAWVPRLGVLCGPWSAGAAVALVSMGLMNAVRSQRPHDHFLRWCTAIATALAAGLCLPVVYHLRGNVLHQPAALATAVCVIFELFFSVAG*
Ga0182016_1044519523300014493BogMMKWLDALFAWALVLLGAAHMLAAWVPKLSLFRGPWAAGVVVAIVTMGLMNAVRSQRRSDRLLRWSTAAATALTAALCLKVLYQFSGNVLHQPAALAVGALALVELFFALVG*
Ga0181525_1041491123300014654BogMKWIDALCAWLLVLLGSAHFLAAYVPKLNLLRCPWAGGAAIAIISMGLMNAVRSQRKSDRFLRWNTAAATALTTGLCMKVLYQFPGNVLHQPAALATAVLAAIELFFAVAG*
Ga0181516_1000895553300014655BogMKWIDTLFAWALVLLGSAHLLAIYVPRLALLRGPWAGGAAVAIITTGMMNAVRSQRRSDGFLRWSTAAATALTAGLCLRVLYQFPGNVLHQPAALAVGALVVAELFFAIAG*
Ga0181516_1004224923300014655BogMKWIDTSFAWAIVLLGSAHFLAAYVPKLTHLRGPWAEGAAVAIITMGLMNAVRSQHRDDHFLRWTTVLTTALTAGLCLRVLYQFQGNVLHQPAALAVGALALVEFFFGVAG*
Ga0181516_1007324343300014655BogMKWIDTLFAWALVLLGSAHFLAAYVPKLSVLLGPWSGSAAVAIVTMGLMNAVRSLHRGDSFLRWATAAATGLTAGLCLGVLYQFQGNVLHQPAALAVGALALIEVFFAVAG*
Ga0181516_1018882833300014655BogMKWMDTLFAWALVVLGSAHYLAAWVPKLSLLRGPWAEGAAVAIISMGIMNAVRAQRKNDSFLRWGTVVVTALTVSMCMSVLYHFPGNVLHQPAALAVGALAVFELFFAVVG*
Ga0181516_1035373313300014655BogMKWMDTLFAWGLVLLGSAHYLAAWVPKLGLLRGPWAEGTAVAIVTMGIMNAVRVQRKSDAFLRWSTAVVTALTAGLCLSVLYHFSGNVLHQPAAL
Ga0181522_1010882633300014657BogMKWIDTSFAWAIVLLGSAHFLAAYVPKLTHLRGPWAEGAAVAIITMGLMNAVRSQHRGDHFLRWATVLTTALTAGLCLRVLYQFQGNVLHQPAALAVGALALVEFFFGVAG*
Ga0181519_1031341023300014658BogMKWLDALFAWALVLLGAAHFLAAWIPKLGLLRGPWAGGAAVAIVSMGLMNAVRSQRKSDRFLRWSTVLVTTLTAALCLRVLYQFSGNVLHQPAALAT
Ga0182030_10002966223300014838BogMKWIDALCAWALVVFGGAHFLAAYVPKLSLLRGPWVGGAAVAIVTIGLMNAVRSQRKSDRFLRWSTAAATALTAALCMKVLYQFQGNVLHQPAALAAGVLALVELFFSVMG*
Ga0182030_1055857523300014838BogMNLLDAVFAWALVLLGSAHFLAAWVPRLGVLCGPWSAGAAVALVSIGLMNAVRSQRPHDHFLRWCTAIATALAAGLCLPVVYHLRGNVLHQPAALATAVCVIFELFFSVAG*
Ga0182030_1104671823300014838BogMMKRLDALFAWALVLLGVAHILATWVPKLSLFRGPWAAGVVVAIITMGLMNAVRSQRRSDRLLRWSTAAATALTAALCLKVLYQFSGNVLHQPAALAVAALALVELFWALVG*
Ga0183100_105197123300016722BioreactorMKWLDKLFAWLLVALGAAHLMALWIPKLGLLRGPWTGGAAVAIISAGLMNAARSQRKSDRFLRSCTALATLLTAAMCLITLYRFSGNVLHQPAALAISVLVLIELFFCVAR
Ga0187847_1003517433300017948PeatlandMGHTMKWIDALFAWALVVLGSAHFLAAWVPKLALLRGPWAGGAAVAIVSMGLMNAVRSQRKSDAYLRWNTAIVSALTAALCLKVLYQFSGNVLHQPAALGTAVLAVIELFFAVAG
Ga0181520_10000160323300017988BogMKWLDALFAWALVLLGAAHFLAAWIPKLGLLRGPWAGGAAVAIVSMGLMNAVRSQRKSDRFLRWSTVLVTTLTAALCLRVLYQFSGNVLHQPAALATGAFAVIELFFALMG
Ga0181520_1001261253300017988BogMKWMDALAAWALVVLGSAQFLAAWIPKLSLVRGPWTGGAAVAIVSMGLMNAVRAQRKSDSFLRWSTVVVTALTAGLCLTVLYRFPGNVLHQPAALATGLLAMLELFFALAG
Ga0181520_1045098423300017988BogMKWIDALFAWALVLLGAAHFLAAYVPKLGMLRGPWADGAAVAIVSMGLMNAVRSQRKSDALLRWSTAFATALTAAMCLKTLYQFSGNVLHQPAALATGLLVVLELFFCVAG
Ga0187871_1077845423300018042PeatlandMKWLDAVFAWALVILGSAHFLAEWVPKLGLLRGPWTGGAAVAIVSMGLMNAVRSQRGSDAFLRWSTAVATALTAWMCLSVLYQFSGNVLHHPAALA
Ga0187871_1080281323300018042PeatlandMGHTMKWIDALFAWALVVLGSAHFLAAWVPKLALLRGPWAGGAAVAIVSMGLMNAVRSQRKSDAYLRWNTTIVSALTASLCLKVLYQFSGNVLHQPAALATAVLAVIELFFAVAG
Ga0187887_1004857433300018043PeatlandMMKWLDALFAWALVLLGLAHMLATWVPKLSLFRGPWAAGVVVAIVTMGLMNAVRSQRRSDRLLRWSTAAATALTAALCLKVLYQFSGNVLHQPAALAVAALALAELFFGLVG
Ga0181508_157541523300019256PeatlandMKWIDALCAWLLVILGSAHFLAAYVPKLSLLRCPWMGGTAIAIISIGLMNAVRSQRKSDRFLRWNTAAATALTTALCMKVLYQFPGNVLHQPAALATAVLAVIELVFTVAG
Ga0224528_1000188203300022861SoilMKWIDTLFAWALVILGSAHFLAAWVPRLSLLRGPWAGGAAIAIVSMGLMNAVRSQRRNDIFLRWTTAVVTLLTAALCVKTLYQFPGNVLHQPAALATGVLAVFELFFAVAG
Ga0224528_103980313300022861SoilIDTLFAWALVLLGSSHFLAAYVPKMSVLRGPWTEGAVVAIVTMGLMNAVRSQHRGDHLLRWATVVSTALTGALCLRVLYQFPGNVLHQPAALAVGAIAVAELFFGLAG
Ga0224527_100186433300022877SoilMKWIDTLFAWALVLLGSSHFLAAYVPKMSVLRGPWTEGAVVAIVTMGLMNAVRSQHRGDHLLRWATVVSTALTGALCLRVLYQFPGNVLHQPAALAVGAIAVAELFFGLAG
Ga0224559_102345323300023091SoilMMKRLDALFAWALVLLGVAHILATWVPKLSLFRGPWAAGVVVAIITMGLMNAVRSQRRSDRLLRWTTAAATALTAALCLKVLYQFSGNVLHQPAALAVAALALVELFWALVG
Ga0224559_103434633300023091SoilMMKWLDTLFAWALVLLGVAHILATWVPKLSLFRGPWAAGVVVAIITMGLMNAVRSQRRSDRLLRWTTAAATALTAALCLKVLYQFSGNVLHQPAALAVAALALVELFFSLVG
Ga0224529_107003023300023247SoilMKWIDTLFAWALVLLGSAHFLSAYVPKLAMLRGPWTEGAMVAIVTMGLMNAVRSQHRGDHFLRWTTVVATALTAALCLRVLYQFQGNVLHQPAALAVGALAVVELLLGVMG
(restricted) Ga0255336_101656133300028024Sandy SoilMKWIDALFAWALVLLGGAHFLAAWVPKLAVLRGPWTGGAAVAIVSMGLMNAVRSQRRKDGFLSWMTALVTALTGAMCIGVLYHFPGNVLHQPAALATGVLAVVELFFALAR
Ga0302145_1025353523300028565BogMKWIDTLFAWALVLLGSSHFLAAYVPKLSVLRGPWEGGAVAAIVTMGLMNAVRSQRRSDRFLRWSTAAATALTAGLCMKVLYQFQGNALHQPAALAVGALALVELFFAVAG
Ga0302267_1006050033300028745BogMKWIDALCAWALVVFGGAHFLAAYVPKLSLLRGPWVGGAAVAIVTIGLMNAVRSQRKSDRFLRWSTAAATALTAALCMKVLYQFQGNVLHQPAALAAGVLALVELFFSVMG
Ga0302157_1057453713300028813BogSRALRGACTMKWIDALCAWALVVFGGAHFLAAYVPKLSLLRGPWVGGAAVAIVTIGLMNAVRSQRKSDRFLRWSTAAATALTAALCMKVLYQFQGNVLHQPAALAAGVLALVELFFSVMG
Ga0302278_1008163713300028866BogMKMKWIDTLCAWLLVILGSAHFLAAYIPKLSLLRCPWMGGTAIAIISIGLMNAVRSQRKSDRFLRWNTAAATALTTALCMKVLYQFPGNVLHQPAALA
Ga0302200_1058797213300028909BogMKWIDTLLAWALVLLGSSHFLAAYVPKLGVLRGPWEGGAVVAIVTMGLMNAVRSQRRSDRFLRWSTAAATALTAGLCLKVLYQFQGNVLDQPAALAVGALALVELFFAVAG
Ga0311341_1019247423300029908BogMKWIDTLFAWALVLLGSSHFLAAYVPKLSVLRGPWEGGAVAAIVTMGLMNAVRSQRRSDRFLRWSTAAATALTAGLCMKVLYQFQGNALHQPAALAVGALALVELFFAV
Ga0311363_1050926013300029922FenMKMKWIDTLCAWLLVILGSAHFLAAYIPKLSLLRCPWMGGTAIAIISIGLMNAVRSQRKSDRFLRWNTAAATALTTALCMKVLYQFPGNVLHQPAALATAV
Ga0302277_117336313300029982BogLRGACTMKWIDALCAWALVVFGGAHFLAAYVPKLSLLRGPWVGGAAVAIVTIGLMNAVRSQRKSDRFLRWSTAAATALTAALCMKVLYQFQGNVLHQPAALAAGVLALVELFFSVMG
Ga0302270_1008176533300030011BogWIDTLFAWALVLLGSSHFLAAYVPKLSVLRGPWEGGAVAAIVTMGLMNAVRSQRRSDRFLRWSTAAATALTAGLCMKVLYQFQGNALHQPAALAVGALALVELFFAVAG
Ga0302275_1009746233300030518BogMKMKWIDTLCAWLLVILGSAHFLAAYIPKLSLLRCPWMGGTAIAIISIGLMNAVRSQRKSDRFLRWNTAAATALTTALCMKVLYQFPGNVLHQPAA
Ga0302318_1014935113300031258BogMKWIDTLFAWALVLLGSAHFLSAYVPKLAMLRGPWTEGAMVAIVTMGLMNAVRSQHRGDHFLRWTTVVATALTAALCLRVLYQFQGNVLHQPAALAVGALAVV
Ga0302318_1030798123300031258BogMKMKWIDTLCAWLLVILGSAHFLAAYIPKLSLLRCPWMGGTAIAIISIGLMNAVRSQRKSDRFLRWNTAAATALTTALCMKVLYQFPGNVLHQPAALATAVLAAIELV
Ga0302320_1094338623300031524BogMMKRLDALFAWALVLLGVAHILATWVPKLSLFRGPWAAGVVVAIITMGLMNAVRSQRRSDRLLRWSTAAATALTAALCLKVLYQFSGNVLHQPAALAVAALALVELFWALVG
Ga0316219_100728153300031759FreshwaterMKWIDALCAWLLVILGSAHFLAAYIPKLGLLRGPWAGGAAVAIVSVGLMNAVRSQRKSDRFLRWNTALATVLTTGLCMKVLYQFQGNVLHQPAALATTVLAVIELVFAVAG
Ga0316219_114722613300031759FreshwaterMMKWLDVLFAWVLVLLGAAHILATWVPKLSLFRGPWAAGLVVAIVTMGLMNAVRSQRRSDRLLRWTTAVATALTAGLCLKVIYQFSGNVLHQPAALATGILAVVELIF
Ga0316217_10001535133300031813FreshwaterMNVLDAIFAWALVLLGSAHFLAAWIPKLGVLCGPWTAGAAVAIVSMGLMNAVRSQRPSDGFLRWSTAVATALTAGLCLPVVYHLPGNVLHQPAALATAVCVLFELFCSVAG
Ga0316217_1001046533300031813FreshwaterMMKWLDALFAWVLVLLGVAHILATWIPKLSLFRGPWAAGLVVAIVTMGLMNAVRSQRRSDRLLRWTTAVATALTAGLCLKVIYQFSGNVLHQPAALATGILAVVELIFTLLG
Ga0316217_1028945723300031813FreshwaterMKWIDALCAWALVVLGSAHLLAAYIPKLSLLRGPWAGGAAAAIVSVGLMNAVRSQRKSDRFLRWNTAAATALTTALCMKVLYQFPGNVLHEPAALAVAVLAAIELVLTVAG
Ga0316223_117232823300032560FreshwaterMMKWLDVLFAWVLVLLGAAHILATWVPKLSLFRGPWAAGLVVAIVTMGLMNAVRSQRRSDRLLRWTTAVATALTAGLCLKVIYQFSGNVLHQPAALATGILAV
Ga0316232_116065223300032605FreshwaterMMKWLDVLFAWVLVLLGAAHILATWVPKLSLFRGPWAAGLVVAIVTMGLMNAVRSQRRSDRLLRWTTAVATALTAGLCLKVIYQFSGNVLHQPAALATGILAVVELIFTLLG
Ga0335081_1095117523300032892SoilMKWLDAPIAWLLVLLGAAHLLAAWIPRLSLLRGPWAAGTAVAVLCVGLMNAVRAQRKSDAFLRWSTALATAVTAGLCMVRLYQFSGNVLHQPVALATSVAAIIELFFAVAG
Ga0335081_1210254223300032892SoilMRWMDALCAWVLVVLGSAHYLAEYVPKLGALRGPWGAGAAAAIVCVGLMNAVRSQRPNDRFLRWSTVAATALTAAMCMGVLYRFSGNVLHQPAALAAGALVIVELLYGLAG
Ga0326728_1008408033300033402Peat SoilMTKWIDTLFAWALVLLGAAHFLAAYVPRLGVLRGPWMGGAAVAIVTAGLMNAVRAQRRNDRFLRWTTALATLLTAALCLKVLYQFDGNVLHQPAALATGALAVVEVLLAVMG
Ga0326728_1009148743300033402Peat SoilMKWLDALAAWVLVVLGSAQFLAAWIPKLSLVRGPWTGGAAVAIISMGLMNAVRSQRKSDSFLRWSTVVVTALTAGLCLTVLYRFPGNVLHQPAALATGLLAVLELFFALAG
Ga0326728_1028926233300033402Peat SoilMKAFRWLDTLFALLLVLLGAAHLLVAFVPRLAPLSGPWSAGAAVAIVTMGLMNTVRAQRASDRLLRWTTVLATLLTTALCFGVLYRFSGNVLHQPAALAVAALAIAELLFAIAG
Ga0326727_1002049343300033405Peat SoilMKAFRWLDTLFALLLVLLGAAHLLAAFVPRLAPLRGPWDAGAAVAIVTMGLMNAVRSQRASDRLLRWTTALATLLTTALCFGVLYRYPANVLHQPAALAVAALAVAELLFAIAG
Ga0371490_115559513300033561Peat SoilMKAFRWLDTLFALLLVLLGAAHLLVAFVPRLAPLSGPWSAGAAVAIVTMGLMNAVRSQRASDRLLRWTTALATLLTTALCFGVLYRYPANVLHQPAALAVAALAVAELLFAIAG
Ga0334792_007100_2687_30223300033888SoilMKWMDTLFAWALVVLGSAHFLAAWVPKLSLLRGPWAGGAAVAIVSMGLMNAVRSQRTGDAFLRWSTAVVTALTAGLCLPVLYRFSGNVLHQPAALATGVLAVFELLFAVAG
Ga0370483_0000081_23467_238023300034124Untreated Peat SoilMKWMDALFAWALVILGSAHFLAAWIPKLGLLRGPWAGGAAVAIVSMGLMNAVRSQRKSDAFLRWNTAIVSALTAALCLKALYQFSGNVLHQPAALATAVLAVIELFFAVAG
Ga0370483_0219856_182_5173300034124Untreated Peat SoilMNLLDAVFAWALVLLGSAHFLAAWVPRLGVLCGPWSAGAAVALVSMGLMNAVRSQRPHDHFLRWCTAIATALAAGLCLPVVYHLRGNVLHQPAALATAVCVIFELFFSVAG
Ga0370494_071105_134_4693300034130Untreated Peat SoilMKWIDALCAWALVVFGSAHFLAAYVPKLSLLRGPWMGGAAVAIVTIGLMNAVRSQRRSDRFLRWSTAAATALTAALCIKVLYQFQGNVLHQPAALAAAVLALVELFFSVMG
Ga0370494_116507_34_3783300034130Untreated Peat SoilMKPMKWLDALFAWALVVLGSAQFLAAWIPKLSLLRGPWAGGAAVAIVSMGLMNAVRSQHRGDSFLRWTTAAATGLTAGLCLGVLYQFQGNVLHQPAALAVGALALAEVFFAVAG
Ga0370515_0000839_11196_115373300034163Untreated Peat SoilMKMKWLDALFAWSLVLLGSAHCLAAWIPKLSLLRGPWAGGTAVAIITMGLMNAVRSQRRSDAFLRWSTAAVTALTAGLCLLMLYRFPGNVLHQPAALATGVLAVVELFFTVAG
Ga0370515_0000917_10961_112963300034163Untreated Peat SoilMKWMDTLFAWALVVLGAADLLAGYVPKLGVLRGPWVGGAAVAIVSMGLMNAVRSQRESDGLLRWSTAVATALTAGVCLPVLYRLSGNVLHRPAALATGVLTVFELLFAMAG
Ga0370515_0037325_1491_18263300034163Untreated Peat SoilMNLLDAVFAWGLVLLGSSHFLAAWVPRLGVLRGPWTAGAAVALVSMGLMNAVRSQRPSDYFLRWCTALATAGTAGLCLPVIYHLPGNPLHQPAALATAVCIVFELFCSVAG
Ga0370515_0101098_71_4063300034163Untreated Peat SoilMNMLDAVFAWALVLLGSAHFLAAWVPRLGVLSGPWTAGAAVAVVSMGLMNAVRSQRPSDHFLRWCTAIATALTAGLCLPVVYHLPGNVLHQPAALATAVFAVFELFFSVAG
Ga0370515_0453157_2_3103300034163Untreated Peat SoilWALVLLGSAHFLAAWIPKLGVLCGPWTAGAAVAIVSMGLMNAVRSQRPSDHFLRWSTAVASALTAGLCLPVVYHLPGNVLHQPAALATAVCVIFELFCSVAG
Ga0370514_042941_270_6053300034199Untreated Peat SoilMNLLDAVFAWALVLLGSAHFLAAWVPRLGVLCGPWSAGAAVALVSMGLMNAVRSQRPHDHFLRWCTAIATALTAGLCLPVVYHLPGNVLHQPAALATAVCVIFELFFSVAG
Ga0370514_050585_589_9243300034199Untreated Peat SoilMKWMDTSFAWAIVLLGSTHFLAAYVPKLTHLRGPWAEGAAVAIITMGLMNAVRSQHRGDHFLRWTTVLTTALTAGLCLRVLYQFQGNVLHQPAALAVGALAVAEFCLGVAG
Ga0370492_0031100_9_3443300034282Untreated Peat SoilMKWIDALCAWALVVFGSAHFLAAYVPKLSLLRGPWMGGAAVAIVTIGLMNAVRSQRKSDRFLRWSTAAATALTAALCIKVLYQFQGNVLHQPAALAAAVLALVELFFSVMG
Ga0370492_0044801_1432_17673300034282Untreated Peat SoilMKWMDALAAWTLVVLGSAQFLAAWIPKLSLIRGPWTGGAAVAIVSMGLMNAVRAQRKSDSFLRWSTVVVTVLTAGLCLTVLYRFPGNVLHQPAALATGLLAVFELFFALAG
Ga0370492_0401338_158_4843300034282Untreated Peat SoilMDTLFAWALVVLGAAHFLAAWIPKLGVLRGPWMGGAAIAIVSMGLMNAVRSRRKGDSFLRCSTAAVTVMTGALCLTILYRYPGNVLHQPAALAVGALAVIELFFSVAG

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.