Metagenome / Metatranscriptome Family F103495

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103495
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	83 residues
Representative Sequence	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Number of Associated Samples	76
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	79.21 %
% of genes near scaffold ends (potentially truncated)	28.71 %
% of genes from short scaffolds (< 2000 bps)	82.18 %
Associated GOLD sequencing projects	61
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (63.366 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (49.505 % of family members)
Environment Ontology (ENVO)	Unclassified (93.069 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (55.446 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 80.00% β-sheet: 0.00% Coil/Unstructured: 20.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00078	RVT_1	15.84
PF02223	Thymidylate_kin	5.94
PF02732	ERCC4	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	5.94
COG1948	ERCC4-type crossover junction endonuclease	Replication, recombination and repair [L]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.34 %
Viruses	superkingdom	All Organisms → Viruses	31.68 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	63.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.97 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	63.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.98 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	63.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.68 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.98 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	63.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.68 %
Unclassified	root	N/A	1.98 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.99 %

Name	Rank	Taxonomy	Distribution
Methanomicrobiales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales	63.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.68 %
Unclassified	root	N/A	1.98 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Methanomicrobiales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales	63.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.68 %
Unclassified	root	N/A	1.98 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	63.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.68 %
Unclassified	root	N/A	1.98 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.99 %

Name	Rank	Taxonomy	Distribution
Methanomicrobiales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	63.37 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	31.68 %
Unclassified	root	N/A	1.98 %
Clostridium cochlearium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium cochlearium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001975\|Draft_10100580	Not Available	527	Open in IMG/M
3300001975\|Draft_10814621	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	528	Open in IMG/M
3300001975\|Draft_10927164	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	526	Open in IMG/M
3300001975\|Draft_11254218	Not Available	532	Open in IMG/M
3300002163\|JGI24707J26582_10026192	All Organisms → Viruses → Predicted Viral	2600	Open in IMG/M
3300002163\|JGI24707J26582_10131872	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	707	Open in IMG/M
3300002164\|JGI24708J26588_10031438	All Organisms → Viruses → Predicted Viral	2268	Open in IMG/M
3300002164\|JGI24708J26588_10199992	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	517	Open in IMG/M
3300002168\|JGI24712J26585_10179233	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	605	Open in IMG/M
3300002170\|JGI24711J26586_10120409	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	686	Open in IMG/M
3300002170\|JGI24711J26586_10185059	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	502	Open in IMG/M
3300002173\|JGI24709J26583_10117001	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	824	Open in IMG/M
3300002378\|JGI24502J29692_10006167	All Organisms → Viruses → Predicted Viral	1213	Open in IMG/M
3300002378\|JGI24502J29692_10068734	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	639	Open in IMG/M
3300002392\|JGI24503J29689_10006713	All Organisms → Viruses → Predicted Viral	1486	Open in IMG/M
3300002392\|JGI24503J29689_10007944	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	815	Open in IMG/M
3300002392\|JGI24503J29689_10023840	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	655	Open in IMG/M
3300002837\|bg3kmer60_1108564	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	516	Open in IMG/M
3300003306\|Ga0004534J46558_1011380	All Organisms → Viruses → Predicted Viral	1018	Open in IMG/M
3300006225\|Ga0082206_132493	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	821	Open in IMG/M
3300006360\|Ga0079079_1151135	All Organisms → Viruses → Predicted Viral	1540	Open in IMG/M
3300006376\|Ga0079101_1026757	All Organisms → Viruses → Predicted Viral	2370	Open in IMG/M
3300006376\|Ga0079101_1034517	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	563	Open in IMG/M
3300006388\|Ga0079062_1031084	All Organisms → Viruses → Predicted Viral	1897	Open in IMG/M
3300006395\|Ga0079066_1028036	All Organisms → Viruses → Predicted Viral	1150	Open in IMG/M
3300006398\|Ga0079067_1012350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2881	Open in IMG/M
3300006585\|Ga0079082_1130266	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	719	Open in IMG/M
3300006589\|Ga0079072_1172266	All Organisms → Viruses → Predicted Viral	1050	Open in IMG/M
3300006591\|Ga0079071_1243499	All Organisms → Viruses → Predicted Viral	1551	Open in IMG/M
3300006597\|Ga0079070_1316730	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	598	Open in IMG/M
3300006597\|Ga0079070_1348584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium cochlearium	874	Open in IMG/M
3300006598\|Ga0079098_1033517	All Organisms → cellular organisms → Bacteria	21233	Open in IMG/M
3300006805\|Ga0075464_10230620	All Organisms → Viruses → Predicted Viral	1104	Open in IMG/M
3300009607\|Ga0123327_1047822	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1775	Open in IMG/M
3300009657\|Ga0116179_1212829	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	649	Open in IMG/M
3300009663\|Ga0116181_1324878	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	552	Open in IMG/M
3300009666\|Ga0116182_1115011	All Organisms → Viruses → Predicted Viral	1322	Open in IMG/M
3300009669\|Ga0116148_1097635	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1446	Open in IMG/M
3300009669\|Ga0116148_1162850	All Organisms → Viruses → Predicted Viral	1004	Open in IMG/M
3300009670\|Ga0116183_1228057	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	848	Open in IMG/M
3300009671\|Ga0123334_1114714	All Organisms → Viruses → Predicted Viral	1341	Open in IMG/M
3300009674\|Ga0116173_1164990	All Organisms → Viruses → Predicted Viral	1070	Open in IMG/M
3300009675\|Ga0116149_1081910	All Organisms → Viruses → Predicted Viral	1741	Open in IMG/M
3300009680\|Ga0123335_1115956	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1524	Open in IMG/M
3300009680\|Ga0123335_1217161	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	973	Open in IMG/M
3300009680\|Ga0123335_1243628	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	897	Open in IMG/M
3300009680\|Ga0123335_1279422	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	815	Open in IMG/M
3300009681\|Ga0116174_10280137	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	808	Open in IMG/M
3300009682\|Ga0116172_10385854	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	662	Open in IMG/M
3300009685\|Ga0116142_10054597	All Organisms → Viruses → Predicted Viral	2311	Open in IMG/M
3300009687\|Ga0116144_10057907	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	2331	Open in IMG/M
3300009687\|Ga0116144_10297823	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	829	Open in IMG/M
3300009688\|Ga0116176_10272341	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	841	Open in IMG/M
3300009690\|Ga0116143_10119842	All Organisms → Viruses → Predicted Viral	1493	Open in IMG/M
3300009715\|Ga0116160_1052525	All Organisms → Viruses → Predicted Viral	1951	Open in IMG/M
3300009720\|Ga0116159_1142744	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1033	Open in IMG/M
3300009780\|Ga0116156_10135625	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1385	Open in IMG/M
3300010340\|Ga0116250_10248512	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1070	Open in IMG/M
3300010340\|Ga0116250_10291081	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	970	Open in IMG/M
3300010346\|Ga0116239_10409353	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	919	Open in IMG/M
3300010351\|Ga0116248_10337490	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1155	Open in IMG/M
3300010355\|Ga0116242_11056983	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	691	Open in IMG/M
3300010356\|Ga0116237_11078768	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	672	Open in IMG/M
3300010357\|Ga0116249_10646820	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	968	Open in IMG/M
3300014203\|Ga0172378_10857713	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	654	Open in IMG/M
3300014203\|Ga0172378_11222604	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	531	Open in IMG/M
3300014203\|Ga0172378_11338318	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	504	Open in IMG/M
3300014204\|Ga0172381_10975488	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	627	Open in IMG/M
3300014205\|Ga0172380_10424366	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	993	Open in IMG/M
3300014206\|Ga0172377_10538249	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	947	Open in IMG/M
3300014206\|Ga0172377_11118171	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	602	Open in IMG/M
3300014206\|Ga0172377_11523171	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	500	Open in IMG/M
3300019220\|Ga0179936_1017264	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	592	Open in IMG/M
3300025618\|Ga0208693_1076909	All Organisms → Viruses → Predicted Viral	1022	Open in IMG/M
3300025618\|Ga0208693_1112663	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	748	Open in IMG/M
3300025677\|Ga0209719_1014360	All Organisms → Viruses → Predicted Viral	4138	Open in IMG/M
3300025713\|Ga0208195_1085144	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1177	Open in IMG/M
3300025730\|Ga0209606_1088936	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1204	Open in IMG/M
3300025784\|Ga0209200_1083952	All Organisms → Viruses → Predicted Viral	1240	Open in IMG/M
3300025859\|Ga0209096_1318484	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	554	Open in IMG/M
3300025861\|Ga0209605_1261484	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	628	Open in IMG/M
3300025871\|Ga0209311_1120856	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1129	Open in IMG/M
3300026311\|Ga0209723_1033413	All Organisms → Viruses → Predicted Viral	2812	Open in IMG/M
3300026311\|Ga0209723_1116476	All Organisms → Viruses → Predicted Viral	1084	Open in IMG/M
3300027510\|Ga0209537_1021187	All Organisms → Viruses → Predicted Viral	2975	Open in IMG/M
(restricted) 3300028570\|Ga0255341_1306018	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	582	Open in IMG/M
3300028602\|Ga0265294_10075221	All Organisms → Viruses → Predicted Viral	2831	Open in IMG/M
3300028602\|Ga0265294_10269368	All Organisms → Viruses → Predicted Viral	1158	Open in IMG/M
3300028602\|Ga0265294_10398030	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	872	Open in IMG/M
3300028603\|Ga0265293_10051485	All Organisms → Viruses → Predicted Viral	3786	Open in IMG/M
3300028624\|Ga0302246_1005966	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	5385	Open in IMG/M
3300028627\|Ga0302243_1014136	All Organisms → Viruses → Predicted Viral	2538	Open in IMG/M
3300028629\|Ga0302248_1072958	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	755	Open in IMG/M
3300028634\|Ga0302242_1059290	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	951	Open in IMG/M
3300028638\|Ga0302240_1019869	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	2311	Open in IMG/M
3300028727\|Ga0307344_103471	All Organisms → Viruses → Predicted Viral	1791	Open in IMG/M
3300029657\|Ga0307343_117543	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	661	Open in IMG/M
3300029667\|Ga0307354_101160	All Organisms → Viruses → Predicted Viral	3376	Open in IMG/M
3300029775\|Ga0134843_1004813	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	6035	Open in IMG/M
3300029822\|Ga0134854_1021694	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	1983	Open in IMG/M
3300029825\|Ga0134835_1011316	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → unclassified Methanomicrobiales → Methanomicrobiales archaeon	4641	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	93.07%
Environmental	Environmental	6.93%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	54.46%
Biotransformation	Engineered → Biotransformation	15.84%
Bioreactor	Engineered → Bioreactor	11.88%
Solid Waste	Engineered → Solid Waste	9.90%
Aquatic	Environmental → Aquatic	6.93%
Built Environment	Engineered → Built Environment	0.99%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	54.46%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	14.85%
Landfill	Engineered → Solid Waste → Landfill	9.90%
Anaerobic	Engineered → Bioreactor → Anaerobic	7.92%
Freshwater	Environmental → Aquatic → Freshwater	5.94%
Unclassified	Engineered → Bioreactor → Unclassified	2.97%
Marine	Environmental → Aquatic → Marine	0.99%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	0.99%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	0.99%
Unclassified	Engineered → Biotransformation → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	54.46%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	14.85%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	9.90%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	7.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	5.94%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	2.97%
Coastal	Environmental → Aquatic → Marine → Coastal	0.99%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	0.99%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	0.99%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	54.46%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	14.85%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	9.90%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	7.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	5.94%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.99%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	0.99%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	49.50%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	14.85%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	7.92%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	5.94%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	5.94%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	4.95%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	3.96%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	2.97%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.99%
Mixed Substrate Biogas Reactor	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Mixed Substrate Biogas Reactor	0.99%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	0.99%
Biogas Reactor	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified → Biogas Reactor	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered	Open in IMG/M
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered	Open in IMG/M
3300002164	Biogas fermentation microbial communities from Germany - Plant 1 DNA2	Engineered	Open in IMG/M
3300002168	Biogas fermentation microbial communities from Germany - Plant 3 DNA2	Engineered	Open in IMG/M
3300002170	Biogas fermentation microbial communities from Germany - Plant 3 DNA1	Engineered	Open in IMG/M
3300002173	Biogas fermentation microbial communities from Germany - Plant 2 DNA1	Engineered	Open in IMG/M
3300002378	Biogas fermentation microbial communities from Germany - Plant 3 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002392	Biogas fermentation microbial communities from Germany - Plant 3 RNA2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300002837	Biogas reactor microbial communities from SLU, Sweden, that are enriched on cellulose - Sample No3 60kmer	Engineered	Open in IMG/M
3300003306	Biogas fermentation microbial communities from Germany - Plant 1 RNA1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006225	Biogas reactor microbial communities from SLU, Alnarp, Sweden - PacBio 99 accuracy	Engineered	Open in IMG/M
3300006360	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Val_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006376	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Total_1013_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006388	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gel_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006395	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006398	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Cas_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006585	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Gly_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006589	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Ile_02_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006591	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Ile_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006597	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Oil_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006598	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_H2B_01_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009607	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C13 SIP DNA	Engineered	Open in IMG/M
3300009657	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG	Engineered	Open in IMG/M
3300009663	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC075_MetaG	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009671	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1 time_0 SIP DNA	Engineered	Open in IMG/M
3300009674	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG	Engineered	Open in IMG/M
3300009675	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG	Engineered	Open in IMG/M
3300009680	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA	Engineered	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300009682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC083_MetaG	Engineered	Open in IMG/M
3300009685	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG	Engineered	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300009688	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_STIC08_MetaG	Engineered	Open in IMG/M
3300009690	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG	Engineered	Open in IMG/M
3300009780	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG	Engineered	Open in IMG/M
3300010340	AD_USOAca	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300010351	AD_USPNca	Engineered	Open in IMG/M
3300010355	AD_USDVca	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010357	AD_USSTca	Engineered	Open in IMG/M
3300014203	Groundwater microbial communities from an aquifer near a municipal landfill in Southern Ontario, Canada - Pumphouse #3_1 metaG	Environmental	Open in IMG/M
3300014204	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 64-88 metaG	Engineered	Open in IMG/M
3300014205	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 162 metaG	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300019220	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Illinois, USA ? AD_UKC059_MetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300025618	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC071_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025677	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025730	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025784	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC033_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025859	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025861	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025871	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG (SPAdes)	Engineered	Open in IMG/M
3300026311	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2 time_0 SIP DNA (SPAdes)	Engineered	Open in IMG/M
3300027510	Biogas fermentation microbial communities from Germany - Plant 4 DNA1 (SPAdes)	Engineered	Open in IMG/M
3300028570 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant12	Engineered	Open in IMG/M
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental	Open in IMG/M
3300028603	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 138R	Engineered	Open in IMG/M
3300028624	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Trp	Engineered	Open in IMG/M
3300028627	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Met	Engineered	Open in IMG/M
3300028629	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Leu	Engineered	Open in IMG/M
3300028634	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Lys	Engineered	Open in IMG/M
3300028638	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_His	Engineered	Open in IMG/M
3300028727	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_UR_Arg1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300029657	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_UR_His2 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300029667	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_UR_Trp1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300029775	Liquor fermentation pit mud microbial communities from Luzhou, China - Meta-4-1-220-B	Engineered	Open in IMG/M
3300029822	Liquor fermentation pit mud microbial communities from Chengdu, China - Meta-7-3-30-T	Engineered	Open in IMG/M
3300029825	Liquor fermentation pit mud microbial communities from Luzhou, China - Meta-1-2-440-M	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Draft_101005802	3300001975	Biogas Fermenter	MNKLLQFLIDSGLLYMIISTSYGGYWFIVEGVSFKEIQDIISAVEESYKEWNISPDEARDYEEIEDV
Draft_108146213	3300001975	Biogas Fermenter	MNKLITIFKLYSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDV
Draft_109271643	3300001975	Biogas Fermenter	MNNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDV
Draft_112542182	3300001975	Biogas Fermenter	MNNLLQFLIDSGLLYMIISTLLTVGMVLLLGKGVSFKETGLLLVAVREFKDGYISPDEARKIYEEVEGSL
JGI24707J26582_100261921	3300002163	Biogas Fermentantion	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVIGHNWYIR
JGI24707J26582_101318722	3300002163	Biogas Fermentantion	MDNLFQFLIDSGLLYMIISTLLTVGIGFFVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
JGI24708J26588_100314382	3300002164	Biogas Fermentantion	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVEXSYKDGYISPDEARXIYEEIEDVIGHNWYIRLFNFIKR*
JGI24708J26588_101999921	3300002164	Biogas Fermentantion	MDSVLQFLIDNGILYIIFSTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVIGHNWYIRLFNFIKR*
JGI24712J26585_101792332	3300002168	Biogas Fermentantion	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVIGHNWYIRLFNFIXR*
JGI24711J26586_101204091	3300002170	Biogas Fermentantion	FLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGSDWYIRLFNIIKR*
JGI24711J26586_101850591	3300002170	Biogas Fermentantion	MDNLFQFLIDSGLLYMIISTLLTVGIGFFVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIKR*
JGI24709J26583_101170011	3300002173	Biogas Fermentantion	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVI
JGI24502J29692_100061672	3300002378	Biogas Fermentantion	MDNLLQFLIDSGLLYMIISTLLTVGIGFFVGKGVSFKEIQDIISAVEESYKDGYISPDEARMIYEEIEDVIGHDWYIRLFNIIKR*
JGI24502J29692_100687342	3300002378	Biogas Fermentantion	MDNLLQFLIDSGLLYMIIFTLFTVGIGFFVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFRIFSRGDV*
JGI24503J29689_100067133	3300002392	Biogas Fermentantion	MNNLLQFLIDSGILYMIFSTLLTVGIGFFVGKGVSFKEIQDIISAVEESYKDGYISPDEARMIYEEIEDVIGHDWYIRLFNIIKR*
JGI24503J29689_100079442	3300002392	Biogas Fermentantion	MDNLLQFLIDSGLLYMIISTLLTVGIGFFVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNFIKR*
JGI24503J29689_100238403	3300002392	Biogas Fermentantion	MDNLLQFLIDSGLLYMIIFTLFTVGIGFFVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFRIFKR
bg3kmer60_11085642	3300002837	Biogas Reactor	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNFIKR*
Ga0004534J46558_10113802	3300003306	Biogas Fermentantion	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVIGHNWYIRLFNFIKR*
Ga0082206_1324931	3300006225	Mixed Substrate Biogas Reactor	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVMGMIGISGCSILSRGDV*
Ga0079079_11511352	3300006360	Anaerobic Digestor Sludge	MIYMDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEITDVIGQDWYIRLFKLFKR*
Ga0079101_10267572	3300006376	Anaerobic Digestor Sludge	MIYMDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0079101_10345172	3300006376	Anaerobic Digestor Sludge	YMIISTLLTVGIGFIVGKGVSFKEIQDIIKVVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFKLFKR*
Ga0079062_10310842	3300006388	Anaerobic Digestor Sludge	MIYMDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIIKVVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFKLFKR*
Ga0079066_10280363	3300006395	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIFSTLLTVGIGFIVGKGVSFKEIQDIIKVVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFKLFKR*
Ga0079067_10123506	3300006398	Anaerobic Digestor Sludge	MIYMDNLLQFLIDSGLLYMIISILLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0079082_11302661	3300006585	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVFGHDWYIRLFNIIKR*
Ga0079072_11722662	3300006589	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0079071_12434995	3300006591	Anaerobic Digestor Sludge	MIYMDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEITDVIGQDWYIR
Ga0079070_13167301	3300006597	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIISTLLTVGIGFFVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0079070_13485844	3300006597	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIFSTLLTVGIGFIVGKGVSFKEIQDIIKVVDESYKDGYISPEEAQKIYEEITDVIGQDWYI
Ga0079098_10335177	3300006598	Anaerobic Digestor Sludge	MIYMDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIIKVVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFNIIKR*
Ga0075464_102306202	3300006805	Aqueous	MDNLLQFLIDSGLLYMIISTLLTVGIGFFVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNYIKR*
Ga0123327_10478225	3300009607	Anaerobic Biogas Reactor	MDNLLQFLIDSGLLFMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPEEARKIYKEIEDVIGQDWYIRMFRLFKR*
Ga0116179_12128292	3300009657	Anaerobic Digestor Sludge	MDSVLQFLIDSGILYMIFSILLTVGIGYIVGKGVSFKEIQDIISAVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFNLLKR*
Ga0116181_13248781	3300009663	Anaerobic Digestor Sludge	MDNLIQFLIDSGILYMIISTLLTVGIGYFVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVIGHNWYIRLFNFIKR*
Ga0116182_11150113	3300009666	Anaerobic Digestor Sludge	MDNLLQFLVDSGILYMIFSTLLTVGIGFFVGKGVSFKEIQDIISAVDESYKDGYISPDEARVIYEEIEDVIGHDWYIRLFNIIKR*
Ga0116148_10976354	3300009669	Anaerobic Digestor Sludge	MEDILQFLIDSGILYMIFSTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLYKLIKR*
Ga0116148_11628504	3300009669	Anaerobic Digestor Sludge	MDNLLQFLVDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISVIDESYKDGYISPDEARKIYEEIEDVIGSDWYIRLFRIFKR*
Ga0116183_12280572	3300009670	Anaerobic Digestor Sludge	MDNLLQFLVDSGILYMIFSTLLTVGIGFFVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0123334_11147144	3300009671	Anaerobic Biogas Reactor	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNFIKR*
Ga0116173_11649904	3300009674	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIISTLLTVGVGFIIGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNYIKR*
Ga0116149_10819104	3300009675	Anaerobic Digestor Sludge	MDNLFQFLIDSGLLYMIISTLLTVGVGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0123335_11159564	3300009680	Anaerobic Biogas Reactor	LLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGSDWYIRLFRIFKR*
Ga0123335_12171612	3300009680	Anaerobic Biogas Reactor	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISVIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNFIKR*
Ga0123335_12436284	3300009680	Anaerobic Biogas Reactor	MDSVLQFLIDSGLLYMIISTLLTVGIGFFVGKGVSFKKIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFN
Ga0123335_12794223	3300009680	Anaerobic Biogas Reactor	MDSILQFLVDSGILYMIFSTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNFIKR*
Ga0116174_102801371	3300009681	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIISTLLTVGVGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNYIKRCCMKFDFKKFKLYFLA
Ga0116172_103858542	3300009682	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIISTLLTVGIGFFVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNYIKR*
Ga0116142_100545975	3300009685	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIFSTLLTVGIGYIVGKGVSFKEIQDIISVIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0116144_100579071	3300009687	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIFSTLLTVGIGYIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Ga0116144_102978232	3300009687	Anaerobic Digestor Sludge	MDNLLQFLIDSGILYMVFSTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0116176_102723411	3300009688	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIED
Ga0116143_101198424	3300009690	Anaerobic Digestor Sludge	MDNLLQFLIDSGILYMIISTLLTVGIGFFVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0116160_10525253	3300009715	Anaerobic Digestor Sludge	MDNLLQFLIDNGILYMIFSTLLTVGIGFFVGKGVSFKEIQDIIKVVDESYKDGYISPEEAEKIYEEITDVIGQDWYIRLFNLLKR*
Ga0116159_11427443	3300009720	Anaerobic Digestor Sludge	MDNLLQFLIDNGILYMIVSTLLTVGIGFFVGKGVSFKEIQDIIKVVDESYKDGYISPEEAEKIYEEITDVIGQDWYIRLFNLLKR*
Ga0116156_101356254	3300009780	Anaerobic Digestor Sludge	MDNLFQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFRIFKR*
Ga0116250_102485121	3300010340	Anaerobic Digestor Sludge	MESVLQLLIESGILPYLFSVILTIIIGYIAGKGISLKEIEDIISAVKESYDDGYISPEEAQKIYKEIEDVIGRDWYIRLYKLLKR*
Ga0116250_102910813	3300010340	Anaerobic Digestor Sludge	MDNLIQFLIDSGLLYMIISTLLTVGIGFFVGKGVSFKEIRDIISAVEESYKDGYISPDEARMIYEEIEDVIGHDWYIRLFNFIKR*
Ga0116239_104093531	3300010346	Anaerobic Digestor Sludge	MDNLLQFLVDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISVIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0116248_103374904	3300010351	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIISTLLTVGVGFIIGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIR
Ga0116242_110569832	3300010355	Anaerobic Digestor Sludge	MDNLFQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0116237_110787682	3300010356	Anaerobic Digestor Sludge	IFSTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0116249_106468202	3300010357	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0172378_108577131	3300014203	Groundwater	MDNLLQFLIDSGLLYMIFSTLLTVGIGFIVGKGVSFKEIQDIISVIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0172378_112226043	3300014203	Groundwater	MDNLFQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHD
Ga0172378_113383182	3300014203	Groundwater	MDSILQFLIDSGILYMIFSTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0172381_109754882	3300014204	Landfill Leachate	MDNLLQFLVDSGILYMIFSTLLTVGIGFFVGKGVSFKEIQDIISAVDESYKDGYISPDEARVIYEEIEDVIGHDWYIRLFKLLKR*
Ga0172380_104243661	3300014205	Landfill Leachate	MDSILQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR*
Ga0172377_105382492	3300014206	Landfill Leachate	MDSILQFLVDSGILYMVFSTLLTVGIGFIVGKGVSFKEIQDIISVIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFRIFKR*
Ga0172377_111181712	3300014206	Landfill Leachate	MDSVLQFLIDSGLLYMIFSTLLTVCIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVIGHNWYIRLFNFIKR*
Ga0172377_115231712	3300014206	Landfill Leachate	MDSVLQFLIDSGILYMIFSTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVIGHNWYIRLFNFIKR*
Ga0179936_10172642	3300019220	Anaerobic Digestor Sludge	MEDILQFLIDSGILYMIFSTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLYKLIKR
Ga0208693_10769093	3300025618	Anaerobic Digestor Sludge	MDNLIQFLIDSGLLYMIISTLLTVGIGFFVGKGVSFKEIRDIISAVEESYKDGYISPDEARMIYEEIEDVIGHDWYIRLFNFIKR
Ga0208693_11126632	3300025618	Anaerobic Digestor Sludge	MDSVLQFLIDSGILYMIFSILLTVGIGYIVGKGVSFKEIQDIISAVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFNLLKR
Ga0209719_10143607	3300025677	Anaerobic Digestor Sludge	MDNLLQFLIDNGILYMIFSTLLTVGIGFFVGKGVSFKEIQDIIKVVDESYKDGYISPEEAEKIYEEITDVIGQDWYIRLFNLLKR
Ga0208195_10851442	3300025713	Anaerobic Digestor Sludge	MDNLLQFLVDSGILYMIFSTLLTVGIGFFVGKGVSFKEIQDIISAVDESYKDGYISPDEARVIYEEIEDVIGHDWYIRLFNIIKR
Ga0209606_10889361	3300025730	Anaerobic Digestor Sludge	MDNLLQFLIDSGILYMIFSTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Ga0209200_10839524	3300025784	Anaerobic Digestor Sludge	MDNLLQFLIDSGLLYMIFSTLLTVGIGYIVGKGVSFKEIQDIISVIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Ga0209096_13184842	3300025859	Anaerobic Digestor Sludge	MDNLLQFLIDSGILYMVFSTLLTVGIGFIVGKGVSFKEIQDIISVIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Ga0209605_12614841	3300025861	Anaerobic Digestor Sludge	MDNLLQFLIDSGILYMVFSTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Ga0209311_11208564	3300025871	Anaerobic Digestor Sludge	MIYMDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFRIFKR
Ga0209723_10334132	3300026311	Anaerobic Biogas Reactor	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISVIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNFIKR
Ga0209723_11164762	3300026311	Anaerobic Biogas Reactor	MDNLLQFLIDSGLLFMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPEEARKIYKEIEDVIGQDWYIRMFRLFKR
Ga0209537_10211872	3300027510	Biogas Fermentantion	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAVEESYKDGYISPDEARKIYEEIEDVIGHNWYIRLFNFIKR
(restricted) Ga0255341_13060183	3300028570	Wastewater	MEDILQFLIDSGILYMIFSTLLTVGIGFIVGKGVSFKEIQDIISAVDESYKDGYISPDEARKIYEEIEDVIGRDWYIRLYKL
Ga0265294_100752216	3300028602	Groundwater	MDNLLQFLVDSGILYMVFSTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Ga0265294_102693681	3300028602	Groundwater	MDSVLQFLVDSGILYMIFSTLLTVGIGFFVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Ga0265294_103980303	3300028602	Groundwater	MDNILQFLVDSGILYMVFSTLLTVGIGFIIGKGVSFKEIQDIISVIDESYKDGYISPDEARVIYEEIEDVIGHDWYIRLFNIIKR
Ga0265293_100514853	3300028603	Landfill Leachate	MDSILQFLVDSGILYMVFSTLLTVGIGFIVGKGVSFKEIQDIISVIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFRIFKR
Ga0302246_10059665	3300028624	Activated Sludge	MDNLLQFLIDSGLLYMIFSTLLTVGIGFIVGKGVSFKEIQDIIKVVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFKLFKR
Ga0302243_10141363	3300028627	Activated Sludge	MIYMDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Ga0302248_10729582	3300028629	Activated Sludge	MIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Ga0302242_10592902	3300028634	Activated Sludge	MDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIISAIDESYKDGYISPDEARKIYEEIEDVIGHDWYIRLFNIIKR
Ga0302240_10198696	3300028638	Activated Sludge	MIFSTLLTVGIGFIVGKGVSFKEIQDIIKVVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFKLFKR
Ga0307344_1034712	3300028727	Anaerobic Digestor Sludge	MIYMDNLLQFLIDSGLLYMIFSTLLTVGIGFIVGKGVSFKEIQDIIKVVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFKLFKR
Ga0307343_1175432	3300029657	Anaerobic Digestor Sludge	DSGLLYMIFSTLLTVGIGFIVGKGVSFKEIQDIIKVVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFKLFKR
Ga0307354_1011604	3300029667	Anaerobic Digestor Sludge	MIYMDNLLQFLIDSGLLYMIISTLLTVGIGFIVGKGVSFKEIQDIIKVVDESYKDGYISPEEAQKIYEEITDVIGQDWYIRLFKLFKR
Ga0134843_100481310	3300029775	Fermentation Pit Mud	MDNLLQFLIDSGILYMIVSTLLTVGIGFIVGKGVSFKEIQDIIGAIEESYEDGYISPDEARKIYKEIEDVIGQDWYIRLFRLFKR
Ga0134854_10216941	3300029822	Fermentation Pit Mud	MDNLLQFLIDSGILYMIVSTLLTVGIGFIVGKGVSFKEIQDIISAIEESYEDGYISPDEARKIYKEIEDVIG
Ga0134835_10113169	3300029825	Fermentation Pit Mud	MDNLLQFLIDSGILYMIVSTLLTVGIGFIVGKGVSFKEIQDIISAIEESYEDGYISPDEARKIYKEIEDVIGRDWYIRMFRLFKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters