Metagenome / Metatranscriptome Family F103105

Overview

Basic Information

• Family ID: F103105
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 101
• Average Sequence Length: 60 residues
• Representative Sequence: MIPAPYDTWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKII
• Number of Associated Samples: 68
• Number of Associated Scaffolds: 101

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 82.18 %
• % of genes near scaffold ends (potentially truncated): 18.81 %
• % of genes from short scaffolds (< 2000 bps): 66.34 %
• Associated GOLD sequencing projects: 54
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (96.040 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor (27.723 % of family members)
• Environment Ontology (ENVO): Unclassified (89.109 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Surface (non-saline) (39.604 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 34.83%
  β-sheet: 12.36%
  Coil/Unstructured: 52.81%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01381	HTH_3	13.86
PF13476	AAA_23	6.93
PF14659	Phage_int_SAM_3	4.95
PF07833	Cu_amine_oxidN1	3.96
PF12844	HTH_19	3.96
PF04492	Phage_rep_O	3.96
PF13443	HTH_26	2.97
PF06725	3D	1.98
PF06114	Peptidase_M78	0.99
PF05105	Phage_holin_4_1	0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.99
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.99
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.99
COG3561	Phage anti-repressor protein Ant	Mobilome: prophages, transposons [X]	0.99
COG4824	Phage-related holin (Lysis protein)	Mobilome: prophages, transposons [X]	0.99
COG5352	Uncharacterized conserved protein	Function unknown [S]	0.99

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.03 %
Unclassified	root	N/A	2.97 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.04 %
Unclassified	root	N/A	2.97 %
Viruses	superkingdom	All Organisms → Viruses	0.99 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	2.97 %

Level 4

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	93.07 %
Unclassified	root	N/A	2.97 %

Level 5

Name	Rank	Taxonomy	Distribution
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	93.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Unclassified	root	N/A	2.97 %

Level 6

Name	Rank	Taxonomy	Distribution
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.98 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	73.27 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Tissierellia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia	0.99 %
Unclassified	root	N/A	2.97 %

Level 7

Name	Rank	Taxonomy	Distribution
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.99 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	66.34 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Thermoanaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	2.97 %
Tissierellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales	0.99 %
Unclassified	root	N/A	2.97 %

Level 8

Name	Rank	Taxonomy	Distribution
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.99 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	12.87 %
Peptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Syntrophomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae	49.50 %
Tissierellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Tissierellaceae	0.99 %
Unclassified	root	N/A	2.97 %
unclassified Thermoanaerobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → unclassified Thermoanaerobacterales	2.97 %

Level 9

Name	Rank	Taxonomy	Distribution
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.99 %
Candidatus Formimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Candidatus Formimonas	0.99 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Syntrophomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas	46.53 %
Thermoanaerobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → unclassified Thermoanaerobacterales → Thermoanaerobacterales bacterium	2.97 %
Tissierella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Tissierellaceae → Tissierella	0.99 %
Unclassified	root	N/A	2.97 %
unclassified Clostridiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae	11.88 %
unclassified Syntrophomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae	1.98 %

Level 10

Name	Rank	Taxonomy	Distribution
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.99 %
Candidatus Formimonas warabiya	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Peptococcaceae → Candidatus Formimonas → Candidatus Formimonas warabiya	0.99 %
Clostridiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	11.88 %
Clostridium kluyveri	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium kluyveri	0.99 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.99 %
Syntrophomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → unclassified Syntrophomonadaceae → Syntrophomonadaceae bacterium	1.98 %
Syntrophomonas wolfei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	42.57 %
Thermoanaerobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → unclassified Thermoanaerobacterales → Thermoanaerobacterales bacterium	2.97 %
Tissierella praeacuta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Tissierellia → Tissierellales → Tissierellaceae → Tissierella → Tissierella praeacuta	0.99 %
Unclassified	root	N/A	2.97 %

Associated Scaffolds

Scaffold	Taxonomy	Length
(restricted) 3300028561|Ga0255343_1051554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	2076
(restricted) 3300028568|Ga0255345_1263388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	646
2209111018|Meso_c522298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	516
3300000032|Draft_c0125340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3075
3300001975|Draft_10539996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → unclassified Clostridiaceae → Clostridiaceae bacterium	519
3300002163|JGI24707J26582_10125135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium kluyveri	736
3300002163|JGI24707J26582_10136928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	687
3300002174|JGI24710J26742_10150190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	720
3300002174|JGI24710J26742_10169237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	654
3300002837|bg3kmer60_1006152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4403

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	88.12%
Environmental	Environmental	11.88%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	5.94%
Bioreactor	Engineered → Bioreactor	31.68%
Bioremediation	Engineered → Bioremediation	8.91%
Biotransformation	Engineered → Biotransformation	5.94%
Built Environment	Engineered → Built Environment	1.98%
Lab Enrichment	Engineered → Lab Enrichment	0.99%
Modeled	Engineered → Modeled	0.99%
Solid Waste	Engineered → Solid Waste	8.91%
Terrestrial	Environmental → Terrestrial	5.94%
Unclassified	Engineered → Unclassified	3.96%
Wastewater	Engineered → Wastewater	24.75%

Category

Habitat	Taxonomy	Distribution
Anaerobic	Engineered → Bioreactor → Anaerobic	28.71%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	24.75%
Continuous Culture	Engineered → Bioreactor → Continuous Culture	0.99%
Defined Media	Engineered → Lab Enrichment → Defined Media	0.99%
Freshwater	Environmental → Aquatic → Freshwater	5.94%
Grass	Engineered → Solid Waste → Grass	0.99%
Landfill	Engineered → Solid Waste → Landfill	7.92%
Mixed Alcohol Bioreactor	Engineered → Biotransformation → Mixed Alcohol Bioreactor	3.96%
Oil Reservoir	Environmental → Terrestrial → Oil Reservoir	2.97%
Simulated Communities (Microbial Mixture)	Engineered → Modeled → Simulated Communities (Microbial Mixture)	0.99%
Soil	Environmental → Terrestrial → Soil	1.98%
Tetrachloroethylene And Derivatives	Engineered → Bioremediation → Tetrachloroethylene And Derivatives	8.91%
Unclassified	Engineered → Unclassified → Unclassified	3.96%
Unclassified	Engineered → Bioreactor → Unclassified	1.98%
Unclassified	Engineered → Biotransformation → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Unclassified	0.99%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	1.98%

Type

Habitat	Taxonomy	Distribution
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	0.99%
Composting	Engineered → Solid Waste → Grass → Composting	0.99%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	5.94%
Marine Sediment Inoculum	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum	0.99%
Tetrachloroethylene	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene	8.91%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	28.71%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	24.75%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	7.92%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified	3.96%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Oil Reservoir → Unclassified	2.97%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	1.98%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	1.98%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Modeled → Simulated Communities (Microbial Mixture) → Unclassified	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%

Subtype

Habitat	Taxonomy	Distribution
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.99%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water	0.99%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	28.71%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	24.75%
Unclassified	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified	8.91%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	7.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	4.95%
Unclassified	Engineered → Unclassified → Unclassified → Unclassified → Unclassified	3.96%
Unclassified	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified	3.96%
Unclassified	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified	2.97%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	1.98%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	1.98%
Unclassified	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Unclassified → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	0.99%
Unclassified	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified	0.99%
Unclassified	Engineered → Modeled → Simulated Communities (Microbial Mixture) → Unclassified → Unclassified	0.99%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.99%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	27.72%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.99%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	21.78%
Anaerobic Wastewater Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Wastewater Sludge	2.97%
Biogas Fermentantion	Engineered → Biotransformation → Mixed Alcohol Bioreactor → Unclassified → Unclassified → Biogas Fermentantion	3.96%
Biogas Fermenter	Engineered → Unclassified → Unclassified → Unclassified → Unclassified → Biogas Fermenter	3.96%
Biogas Fermenter	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Biogas Fermenter	0.99%
Biogas Reactor	Engineered → Biotransformation → Unclassified → Unclassified → Unclassified → Biogas Reactor	1.98%
Bioremediated Contaminated Groundwater	Engineered → Bioremediation → Tetrachloroethylene And Derivatives → Tetrachloroethylene → Unclassified → Bioremediated Contaminated Groundwater	8.91%
Coalbed Water	Environmental → Aquatic → Freshwater → Groundwater → Coalbed Water → Coalbed Water	0.99%
Defined Medium	Engineered → Modeled → Simulated Communities (Microbial Mixture) → Unclassified → Unclassified → Defined Medium	0.99%
Fermentation Pit Mud	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Fermentation Pit Mud	1.98%
Food Waste	Engineered → Bioreactor → Continuous Culture → Marine Sediment Inoculum → Unclassified → Food Waste	0.99%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	4.95%
Hydrocarbon Resource Environments	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Hydrocarbon Resource Environments	0.99%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	6.93%
Oil Sands	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Oil Sands	1.98%
Petroleum Reservoir	Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Petroleum Reservoir	0.99%
Produced Fluid	Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Produced Fluid	0.99%
Solid Waste From Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Solid Waste From Bioreactor	0.99%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.99%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	1.98%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
2209111018	Mesophilic bioreactor microbial communities at Bielefeld, Germany	Engineered
3300000032	Oil sands microbial community from Northern Alberta which degrade Naphthaline	Engineered
3300001975	Biogas fermenter microbial communities from the University of Hamburg, Germany	Engineered
3300002163	Biogas fermentation microbial communities from Germany - Plant 1 DNA1	Engineered
3300002174	Biogas fermentation microbial communities from Germany - Plant 2 DNA2	Engineered
3300002837	Biogas reactor microbial communities from SLU, Sweden, that are enriched on cellulose - Sample No3 60kmer	Engineered
3300002898	Metagenome Biopara biogasfermenter May 2013 pooled	Engineered
3300003535	Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1	Environmental
3300003667	Lithgow State Coal Mine Metagenomic Study (LSCM 3 Late (Sample 2))	Environmental
3300005323	Bioremediated contaminated groundwater from EPA Superfund site, New Mexico - Sample SAE3-23	Engineered

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Meso_5222982	2209111018	Solid Waste From Bioreactor	MIPEPYASWPVVMSRNKAARLLGVDRKTLAKNKDLLARCSEVIGDQPKIIRDRLLRELKI
Draft_01253404	3300000032	Hydrocarbon Resource Environments	MIPSPYDAWPVVMSRNKAAKLLGIDRKTLAKNKKLLDKCSEIIGDKPKVIRDRLLRELKII*
Draft_105399961	3300001975	Biogas Fermenter	MIPEPYASWPVVMSRNKAARLLGVDRKTLAKNKDLLARCSEVIGDQPKIIRDRLLRELKII*
JGI24707J26582_101251353	3300002163	Biogas Fermentantion	MKGRDRMIPEPYNSWPVVMSRNKAAQLLGVDRKTLAKNKQLLDRCSEKIGDKPKVIRDRLLRELKI
JGI24707J26582_101369282	3300002163	Biogas Fermentantion	MIPEPYSTWPVVMSRSKAARLLGVDRKTLAKNKDLLDKCSEKIGDKPKIIRDRLLRELKIIE*
JGI24710J26742_101501901	3300002174	Biogas Fermentantion	MIPEPYNTWPVVMSRNKAAQLLGIDRKTLAKNREMLDRCSEKIGDKPKVIRDRLLKELKII*
JGI24710J26742_101692373	3300002174	Biogas Fermentantion	MIPEPYNTWPVVMSRNKAAQLLGIDRKTLAKNKDLLDRCSERIGDKPKVI
bg3kmer60_10061522	3300002837	Biogas Reactor	MIPAPYSEWPVVMSRAKAARLLGVDRKTLAKNKDLLNRCSEVIGNQPKIIRDRLLRELKII*
bg3kmer60_10692821	3300002837	Biogas Reactor	MKGRDRMIPEPYKSWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKII*
draft_102279131	3300002898	Biogas Fermenter	MIPAPYDSWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKII*
draft_102550142	3300002898	Biogas Fermenter	MIPEPYNTWPVVMSRNKAAQLLGIDRKTLAKNKDLLDRCSERIGDKPKVIRDRLLRELKII*
draft_103532902	3300002898	Biogas Fermenter	MIPEPYNSWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKII*
draft_104057482	3300002898	Biogas Fermenter	MIPAPYDSWPVVMSRNKAAKLLGIDRKTLAKNKEMLDRCSEKIGDKPKVIRDRLLRELKII*
Ba1_10134574	3300003535	Petroleum Reservoir	VIPAPYNSWPVVMSTNKAAQLLGVDRKTLAKNKNMLARCSETIGGKSKVIRDRLLRELKII*
LSCM3L_10481361	3300003667	Coalbed Water	MIPEPYKSWPVVMSRNKAAKLLGIDRKTLAKNKQLLDRCSEKIGDKPKVIRDRLLRELKII*
Ga0074198_100007113	3300005323	Bioremediated Contaminated Groundwater	MLSEPYNTWPVLMSRNKAARLLGIDRKTLAKNKEMLDRCSEVIGGKPKVVRDRLLRELKIIQ*
Ga0074198_10036306	3300005323	Bioremediated Contaminated Groundwater	MIPEPYSSWPVVMSTNQAAKLLGVDRKTLAKNKKMLAQCSETIGEKSKVIRDRLLRELKIIQ*
Ga0074193_10832831	3300005405	Bioremediated Contaminated Groundwater	VKFVIPDPYNTWPVVMSTNKAAQLLGVDRKTLAKNKKMLERCSEIIGDKSKVIRDRLLKELKII*
Ga0101770_10651263	3300006674	Food Waste	MIPEPYASWPVVMSRNKAARLLGVDRKTLAKNKDLLARCSEIIGDKPKIIRDRLLKELKII*
Ga0102510_10043712	3300006884	Oil Sands	VIPDPYNTWPVVMSTNKAAQLLGVDRKTLAKNKKMLERCSEIIGDKSKVIRDRLLKELKII*
Ga0115997_100043210	3300008940	Oil Sands	MSTNKAAQLLGVDRKTLAKNKKMLERCSEIIGDKSKVIRDRLLKELKII*
Ga0079224_1011212712	3300009095	Agricultural Soil	LEEIGMIPEPYASWPVVMSRNKAARLLGVDRKTLAKNKDLLARCSEVIGDKPKIIRDRLLKELKII*
Ga0118671_10145437	3300009121	Anaerobic Wastewater Sludge	MIPAPYDTWPVVMSLNKAAQLLGIDRKTLAKNKELLDRCSEVIGDKPKVIRDRLLRELKLI*
Ga0118671_11579422	3300009121	Anaerobic Wastewater Sludge	MIPAPYDTCPVVMSRNKAAKLLGVDRKTLAKNKALLDRCSEKIGDKPKVIRDRLLRELKII*
Ga0118673_10112094	3300009362	Anaerobic Wastewater Sludge	MIPAPYDTCPVVMSRNKAAKLLGVDRKTLAKNKALLDRCSEKIGDKPKVIRDRLLKELKII*
Ga0116234_10161195	3300009542	Anaerobic Biogas Reactor	MRQKKEKRAMIPSPYDSWPVVMSLNKAAQLLGVDRKTLAKNKELLDRCSEVIGDKPKVIRDRLLRELKLI*
Ga0123327_10113815	3300009607	Anaerobic Biogas Reactor	MSANKAATLLGVDRKTLAKNQKLLARCSETIGDKPKVIRDRLLRELKII*
Ga0123327_12251603	3300009607	Anaerobic Biogas Reactor	EPYNSWPVVMSANKAALLLGVDRKTLAKNQKMLARCSETIGDKPKVIRDRLLRELKII*
Ga0123331_10048308	3300009642	Anaerobic Biogas Reactor	MIPSPYDSWPVVMSLNKAAQLLGVDRKTLAKNKELLDRCSEVIGDKPKVIRDRLLRELKLI*
Ga0123331_12577152	3300009642	Anaerobic Biogas Reactor	PVVMSLKKAAQLLGVDRKTLAKNKALLTRCTEQIGDKPKVIRDRLLRELKII*
Ga0116175_10140594	3300009648	Anaerobic Digestor Sludge	MIPDPYNTWPVVMSRNKAAQLLGIDRKTLAKNKELLDRCSERIGDKPKVIRDRLLRELKII*
Ga0123330_11426593	3300009652	Anaerobic Biogas Reactor	MIPSPYDTWPVVMSQNKAARLLGVDRKTLAKNKELLARCSDVIGDKPKIIRDRLLKELKII*
Ga0123330_13305761	3300009652	Anaerobic Biogas Reactor	PEPYNTWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKII*
Ga0123329_10177604	3300009656	Anaerobic Biogas Reactor	MIPAPYDTWPVVMSLNKAAQLLGIDRKTLAKNKELLDRCSEVIGDKPKVIRDRLLSELKLI*
Ga0116179_10698721	3300009657	Anaerobic Digestor Sludge	VVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKII*
Ga0116179_11467933	3300009657	Anaerobic Digestor Sludge	MIPEPYNSWPVVMSRNKAAKLLGVDRKTLAKNKALLDRCSEKIGDKPKVIRDRLLRELKII*
Ga0123328_10913731	3300009659	Anaerobic Biogas Reactor	DTCPVVMSRNKAAKLLGVDRKTLAKNKALLDRCSEKIGDKPKVIRDRLLKELKII*
Ga0116181_12385652	3300009663	Anaerobic Digestor Sludge	MIPAPYDTWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKII*
Ga0116182_10760004	3300009666	Anaerobic Digestor Sludge	MIPAPYDTWPVVMSRNKAAQLLGIDRKTLAKNQQLLDRCSEKIGDKPKVIRDRLLRELKII*
Ga0116182_14217711	3300009666	Anaerobic Digestor Sludge	MIPAPYDTWPVVMSRNKAAQLLGIDRKTLAKNKEMLDRCSEKIGDTPKVIRDRLLKELKII*
Ga0116147_12647282	3300009667	Anaerobic Digestor Sludge	MIPAPYNTWPVVMSQNKAAKLLGIDRKTLAKNKQLLDRCSEKIGDKPKVIRDRLLKELKII*
Ga0116183_10563805	3300009670	Anaerobic Digestor Sludge	MIPAPYDTWPVVMSRNKAAKLLGIDRKTLAKNKEMLDRCSEKIGDTPKVIRDRLLKELKII*
Ga0123334_10092245	3300009671	Anaerobic Biogas Reactor	MSANKAALLLGVDRKTLAKNQKMLARCSETIGDKPKVIRDRLLRELKII*
Ga0123334_12241143	3300009671	Anaerobic Biogas Reactor	VMSRNKAAKLLGVDRKTLAKNKALLDRCSEKIGDKPKVIRDRLLRELKII*
Ga0123335_12013752	3300009680	Anaerobic Biogas Reactor	MIPAPYDTWPVVMSLNKAAQLLGVDRKTLAKNKALLTRCTEQIGDKPKVIRDRLLRELKII*
Ga0123335_12461392	3300009680	Anaerobic Biogas Reactor	MIPSPYDTWPVVMSRNKAAKLLGVDRKTLAKNKDLLARCTEVIGDKPKVIRDRLLKELKII*
Ga0123335_12817102	3300009680	Anaerobic Biogas Reactor	MIPAPYDAWPVVMSRNKAAQLLGIDRKTLAKNKQLLDKCSEQIGDKPKVIRDRLLRELKII*
Ga0123335_14651421	3300009680	Anaerobic Biogas Reactor	MIPAPYDTCPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKII*
Ga0116163_10879361	3300009713	Anaerobic Digestor Sludge	MIPNPYDTWPVVMSLNKAAQLLGIDRKTLAKNKALLDRCSVVIGDKPKVIRDRLLRELKLI*
Ga0116168_10353952	3300009761	Anaerobic Digestor Sludge	MIPEPYNSWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSENIGDKPKVIRDRLLRELKII*
Ga0136246_100151705	3300010236	Produced Fluid	MERIPEPYASWPVIMSYTEAARRLGVDRKTLSKNKALLIKCSETIGDKPKVIRDRLLKELKII*
Ga0116250_103540313	3300010340	Anaerobic Digestor Sludge	MIPEPYASWPVVMSRNKAARLLGVDRKTLAKNKDLLARCSEVIGDQPKIIRDRLLKELKII*
Ga0116255_101971171	3300010348	Anaerobic Digestor Sludge	MLPAPYDSWPVVMSQNKAAKLMGIDRKTLAKNKQLIDRCSEQIGDKPKVIRDRLLRELKII*
Ga0116240_108948342	3300010349	Anaerobic Digestor Sludge	MIPAPYDTWPVVMSRNKAAQLLGIDRKTLAKNKKLLDRCSERIGDKPKVIRDRLLR
Ga0116242_101322197	3300010355	Anaerobic Digestor Sludge	MIPEPYKSWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKII*
Ga0116242_106178503	3300010355	Anaerobic Digestor Sludge	MIPAPYDTWPVVMSLNKAAQLLGIDRKTLAKNKELLDRCSEVIGDKPKVIRDRLLRELKI
Ga0172378_102647103	3300014203	Groundwater	MIPEPYKSWPVVMSRAKAAQLLGIDRKTLAKNQQLLDRCSERIGDKPKVIRDRLLKELKII*
Ga0172378_103799651	3300014203	Groundwater	IPAPYNTWPVVMSRAKAAQLLGIDRKTLAKNKEMLDRCSEKIGDKPKVIRDRLLKELKII
Ga0172381_100067585	3300014204	Landfill Leachate	MIPDPYSTWPVVMSRNKAAKLLGIDRKTLAKNKMLLDRCSEVIGDKPKVIRDRLLRELKII*
Ga0172381_100153665	3300014204	Landfill Leachate	MIPEPYNSWPVIMTVSKASKLLGIDRKTLLRNNKLMELCTDAVGNKPKVIRDRLLKELKIIN*
Ga0172381_100397744	3300014204	Landfill Leachate	MIPDQYSTWPVVMSRNKAAQLLGINRKTLAKNKELLDRCSVKIGDKPKVVRDRLLKELEVM*
Ga0172381_105536873	3300014204	Landfill Leachate	MIPAPYDTWPVVMSRNKAAQLLGIDRKTLAKNQQLLDRCSERIGDKPKVIRDRLLKELKII*
Ga0172381_112010382	3300014204	Landfill Leachate	MIPAPYDSWPVVMSRSKAARLLGVDRKTLAKNEELLSRCSEIIGDQPKIIRDRLLRELKII*
Ga0172377_108608743	3300014206	Landfill Leachate	MIPAPYDTWPVVMSRNKAAQLLGIDRKTLAKNQQLLDRCSEKIGDKPKVIRDRLLRELKLI*
Ga0172382_104625793	3300015214	Landfill Leachate	MIPEPYNTWPVVMSRNKAAKLLGIDRKTLAKNKEMLDRCSEKIGDKPKVIRDRLLKELKII*
Ga0180029_10694103	3300019224	Anaerobic Biogas Reactor	MIPAPYDTWPVVMSLNKAAQLLGIDRKTLAKNKELLDRCSEVIGDKPKVIRDRLLRELKL
Ga0180031_12785032	3300020072	Anaerobic Biogas Reactor	MIPAPYDTCPVVMSRNKAAKLLGVDRKTLAKNKALLDRCSEKIGDKPKVIRDRLLRELKI
Ga0228536_10010259	3300022177	Defined Medium	VIPAPYNSWPVVMSTNKAAQLLGVDRKTLAKNKNMLARCSETIGGKSKVIRDRLLRELKI
Ga0209508_10280063	3300025471	Anaerobic Digestor Sludge	MIPEPYNSWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSENIGDKPKVIRDRLLRELKI
Ga0208938_10098672	3300025587	Anaerobic Digestor Sludge	MIPDPYNTWPVVMSRNKAAQLLGIDRKTLAKNKELLDRCSERIGDKPKVIRDRLLRELKI
Ga0208693_10137932	3300025618	Anaerobic Digestor Sludge	MIPAPYDTWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKI
Ga0208823_10426842	3300025657	Anaerobic Digestor Sludge	MIPEPYNSWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKI
Ga0208564_10870844	3300025683	Anaerobic Digestor Sludge	TWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKII
Ga0208195_11773993	3300025713	Anaerobic Digestor Sludge	MIPAPYDTWPVVMSRNKAAQLLGIDRKTLAKNQQLLDRCSEKIGDKPKVIRDRLLKELKI
Ga0208694_11897793	3300025737	Anaerobic Digestor Sludge	MIPAPYDTWPVVMSRNKAAKLLGIDRKTLAKNKEMLDRCSEKIGDTPKVIRDRLLKELKI
Ga0209509_10074066	3300026194	Anaerobic Biogas Reactor	LIPEPYNSWPVVMSANKAATLLGVDRKTLAKNQKLLARCSETIGDKPKVIRDRLLRELKI
Ga0209509_10141566	3300026194	Anaerobic Biogas Reactor	MIPAPYDTCPVVMSRNKAAKLLGVDRKTLAKNKALLDRCSEKIGDKPKVIRDRLLKELKI
Ga0209312_10480661	3300026195	Anaerobic Biogas Reactor	MIPAPYDTCPVVMSRNKAAKLLGVDRKTLAKNKALLDRCSEKIGDKPKVIRD
Ga0209312_10816453	3300026195	Anaerobic Biogas Reactor	YDTCPVVMSRNKAAKLLGVDRKTLAKNKALLDRCSEKIGDKPKVIRDRLLKELKII
Ga0209312_11323241	3300026195	Anaerobic Biogas Reactor	EPYNSWPVVMSANKAALLLGVDRKTLAKNQKMLARCSETIGDKPKVIRDRLLRELKII
Ga0209313_100208413	3300026198	Anaerobic Biogas Reactor	MIPSPYDSWPVVMSLNKAAQLLGVDRKTLAKNKELLDRCSEVIGDKPKVIRDRLLRELKL
Ga0209612_10697421	3300026250	Anaerobic Biogas Reactor	MIPAPYDTWPVVMSLNKAAQLLGIDRKTLAKNKELLDRCSEVIGDKPKVIRDRLLR
Ga0209510_10281348	3300026290	Anaerobic Biogas Reactor	LIPEPYNSWPVVMSANKAALLLGVDRKTLAKNQKMLARCSETIGDKPKVIRDRLLRELKI
Ga0209510_10441374	3300026290	Anaerobic Biogas Reactor	MIPSPYDTWPVVMSQNKAARLLGVDRKTLAKNKELLARCSDVIGDKPKIIRDRLLKELKI
Ga0209723_11749322	3300026311	Anaerobic Biogas Reactor	MIPAPYDTWPVVMSLNKAAQLLGVDRKTLAKNKALLTRCTEQIGDKPKVIRDRLLRELKI
Ga0209723_12927211	3300026311	Anaerobic Biogas Reactor	MIPAPYDAWPVVMSRNKAAQLLGIDRKTLAKNKQLLDKCSEQIGDKPKVIRDRLLRELKI
Ga0209340_100015194	3300027419	Bioremediated Contaminated Groundwater	MLSEPYNTWPVLMSRNKAARLLGIDRKTLAKNKEMLDRCSEVIGGKPKVVRDRLLRELKIIQ
Ga0209340_100020474	3300027419	Bioremediated Contaminated Groundwater	MIPEPYSSWPVVMSTNQAAKLLGVDRKTLAKNKKMLAQCSETIGEKSKVIRDRLLRELKIIQ
Ga0209639_10397335	3300027566	Bioremediated Contaminated Groundwater	LKTIDREEVKHVIPDPYNTWPVVMSTNKAAQLLGVDRKTLAKNKKMLERCSEIIGDKSKVIRDRLLKELKII
Ga0209639_11614012	3300027566	Bioremediated Contaminated Groundwater	VKFVIPDPYNTWPVVMSTNKAAQLLGVDRKTLAKNKKMLERCSEIIGDKSKVIRDRLLKELKII
(restricted) Ga0255343_10515545	3300028561	Wastewater	MIPEPYKSLPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKI
(restricted) Ga0255345_12633882	3300028568	Wastewater	MIPAPYNTWPVVMSRNKAAQLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRL
Ga0265294_100224827	3300028602	Groundwater	MIPAPYNTWPVVMSRAKAAQLLGIDRKTLAKNQQLLDRCSERIGDKPKVIRDRLLKELKI
Ga0265294_103545944	3300028602	Groundwater	MIPEPYKSWPVVMSRAKAAQLLGIDRKTLAKNQQLLDRCSERIGDKPKVIRDR
Ga0265294_107703692	3300028602	Groundwater	MIPAPYDPWPVVMSRNKAAQLLGIDRKTLAKNQQLLDRCSERIGDKPKVIRDRLLKELKI
Ga0311022_109722771	3300029799	Anaerobic Digester Digestate	MIPTPYDTWPVGMSLNKAAQLLGVDRKTLAKNKALLDRCSEVVGDKPKVIRDRLLRELKI
Ga0134854_10410023	3300029822	Fermentation Pit Mud	MIPEPYSSWPVVMSRNKAAKLLGIDRKTLAKNKELLDRCSEKIGDKPKVIRDRLLRELKI
Ga0134835_10102738	3300029825	Fermentation Pit Mud	MIPEPYNSWPVVMSTNKAAKLLGVDRKTLAKNKKMLDRCSATIGDKSKVIRDRLLRELKI
Ga0272380_100572027	3300029959	Bioremediated Contaminated Groundwater	VIPDPYNTWPVVMSTNKAAQLLGVDRKTLAKNKKMLERCSEIIGDKSKVIRDRLLKELKI
Ga0272380_104389242	3300029959	Bioremediated Contaminated Groundwater	MEAFVLIPDQYKDWPVVMSRNKAAKLLGVHRDTLAKNKDLLDRCSEQIGDKPKIIRDRLLRELKII
Ga0316599_056996_553_738	3300034653	Untreated Peat Soil	MIPSPYDAWPVVMSRNKAAQLLGIDRKTLAKNKQLLDRCSETIGDKPKVIRDRLLRELKI