3300008940: Final time point T34 (2) (live) benzoate enrichments of Methanogenic microbial communities using Athabasca oil sands as inoculum DE NOVO (2)

Overview

Basic Information

• IMG/M Taxon OID: 3300008940
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0117890 | Gp0125720 | Ga0115997
• Sample Name: Final time point T34 (2) (live) benzoate enrichments of Methanogenic microbial communities using Athabasca oil sands as inoculum DE NOVO (2)
• Sequencing Status: Permanent Draft
• Sequencing Center: Shell Corporation
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 68049203
• Sequencing Scaffolds: 1
• Novel Protein Genes: 1
• Associated Families: 1

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Methanogenic Incubations Using Athabaskan Oil Sands From Alberta Canada
• Type: Environmental
• Taxonomy: Environmental → Terrestrial → Oil Reservoir → Unclassified → Unclassified → Oil Sands → Methanogenic Incubations Using Athabaskan Oil Sands From Alberta Canada

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): terrestrial biome → oil reservoir → sand
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Canada: Alberta
• Coordinates
  • Lat. (^o): 57.02
  • Long. (^o): -111.65
  • Alt. (m): N/A
  • Depth (m): N/A

Associated Families

Family	Category	Number of Sequences	3D Structure?
F103105	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ga0115997_1000432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	6848

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0115997_1000432	Ga0115997_100043210	F103105	MSTNKAAQLLGVDRKTLAKNKKMLERCSEIIGDKSKVIRDRLLKELKII*