Sample 3300003535

Overview

Basic Information
IMG/M Taxon OID	3300003535 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0112330 \| Gp0107643 \| Ga0060329
Sample Name	Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1
Sequencing Status	Permanent Draft
Sequencing Center
Published?	N
Use Policy	Open

Dataset Contents
Total Genome Size	88315047
Sequencing Scaffolds	11
Novel Protein Genes	13
Associated Families	13

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	2
Not Available	3
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)
Name	Petroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation
Type	Environmental
Taxonomy	Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Petroleum Reservoir → Petroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	terrestrial biome → oil reservoir → oil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline)

Location Information
Location	Brazil: State of Bahia
Coordinates	Lat. (^o)	-12.2	Long. (^o)	-38.11	Alt. (m)	N/A	Depth (m)	500 to 1000
Location on Map

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Family	Category	Number of Sequences	3D Structure?
F023356	Metagenome / Metatranscriptome	210	Y
F025288	Metagenome / Metatranscriptome	202	N
F029455	Metagenome / Metatranscriptome	188	Y
F029922	Metagenome / Metatranscriptome	187	Y
F031475	Metagenome / Metatranscriptome	182	N
F038519	Metagenome	165	Y
F048287	Metagenome / Metatranscriptome	148	N
F048390	Metagenome / Metatranscriptome	148	Y
F070092	Metagenome	123	N
F079376	Metagenome / Metatranscriptome	116	Y

Scaffold	Taxonomy	Length	IMG/M Link
Ba1_1000178	All Organisms → cellular organisms → Bacteria	2782	Open in IMG/M
Ba1_1000195	Not Available	12769	Open in IMG/M
Ba1_1002162	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	848	Open in IMG/M
Ba1_1002337	Not Available	24572	Open in IMG/M
Ba1_1013457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	2235	Open in IMG/M
Ba1_1020657	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	1258	Open in IMG/M
Ba1_1021392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	566	Open in IMG/M
Ba1_1028087	Not Available	941	Open in IMG/M
Ba1_1036409	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
Ba1_1038387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	709	Open in IMG/M

Scaffold

Taxonomy

Length

IMG/M Link

Ba1_1000178

All Organisms → cellular organisms → Bacteria

2782

Open in IMG/M

Ba1_1000195

Not Available

12769

Open in IMG/M

Ba1_1002162

All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.

848

Open in IMG/M

Ba1_1002337

Not Available

24572

Open in IMG/M

Ba1_1013457

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei

2235

Open in IMG/M

Ba1_1020657

All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009

1258

Open in IMG/M

Ba1_1021392

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi

566

Open in IMG/M

Ba1_1028087

Not Available

941

Open in IMG/M

Ba1_1036409

All Organisms → cellular organisms → Bacteria

762

Open in IMG/M

Ba1_1038387

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium

709

Open in IMG/M

Scaffold ID	Protein ID	Family	Sequence
Ba1_1000178	Ba1_10001781	F023356	MSENSLKKAVLKSRASAAEAEVMSTELKKSKVITLRVEEPLFKAIEAQAELWNVKPAETIRRVLRFYFLPGALEMQLRGESEKFWKGELTPEALREYMVFTLEATGKLSSSALFLKGEASRLSEALEGKLSEALKEEREGAEP*
Ba1_1000178	Ba1_10001785	F048287	MIDTLKLMLSDYEVSPESSVRVQPASYEVATGEKVEYPLFRNEAGTFYGSKAYLNTENWNLTLKPLPAGNRGVGAFLQFSVPKNYYGSNYFSVGEAGTRAALKKVEGELVQNGVFTNLEEAELSRIDTFKNIEPEEPFSSYFSLFSLLKARRAQQRGYGTTFLVANSSQEFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRTLYGFTRVNELFHGGYEVVKEKQVESWKNSLFSFSAEEVVVLGSKQLEQEMKAFQEKFGSNWFQYFLKSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVLTREEGSSKTLGELYEELRGKVCELAGRN*
Ba1_1000195	Ba1_100019511	F048390	MVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQQGGNVAITVQPAGKGKFSILLSPVEE*
Ba1_1002162	Ba1_10021622	F092111	MTPEEGNDVREMVWEMSRTTNKILIFGIILILAILAVLIYLGILSFPSLAN*
Ba1_1002337	Ba1_10023373	F029455	MTESKRIVDIDLWEDGTADRLPKITVTGAGLRFEGERAEFDRLCLILGGWLKP*
Ba1_1002337	Ba1_10023378	F038519	MKFRKSIIMQMHVIAYEPSADWAGPYTNQELLKRTLAIIQQVDRTAEVISKETDPWAEQILAGLLPYKIHVDLVDGMPQLPAAVSITWPPAQLEGIQIGSQEFREYFVWAKSEVAALRKLATLNKTPSAAKPAAATEEA*
Ba1_1013457	Ba1_10134574	F103105	VIPAPYNSWPVVMSTNKAAQLLGVDRKTLAKNKNMLARCSETIGGKSKVIRDRLLRELKII*
Ba1_1020657	Ba1_10206572	F095523	MGVSIPIEYLYITVGLLVVAVIYIINDKNNARLYNPEGPLFVKARKKEIPILRVIDPGTNHARHVLGDKERDDDPVYAKDMWGLHADPAYIEGDASPERHPGGLLIYNISPNVTFPISPRNVLAQQTILRHRHDLPEFADLDFLSDRDLLVLLSSPSDHLPHDAQIFTDNYKPTIVEIDESGQPVEVEMNAADLVERITAFKKYATTLPVEGGGFAYHEYFRNNPYGHSSQTTQRINYLFQKIADRKSAMADKLWTYGLIAIGLLGAVGVTIYIISLAAG*
Ba1_1021392	Ba1_10213921	F031475	LGSSMDAKTSDSSQDSLNANPQKQCEKLTQLDFLTLEMMGISLEELRALLDEEELQAYFAFLRRQSSDLDSTSP*
Ba1_1028087	Ba1_10280871	F070092	MAINDRLKPVMELLETNRQKIGLMISHGMASDLAIERRKKELYHEVMTAKENAFKEELADLEGEIRKIEDSYREPKKDPTTKLLEFEQIKAKIRSTPSKELKELTHKFQNTGAIPGIPWERPDHVDVLVAELRIRGLDEEADLTWDHAYNKLKVDRPWENNPLYKQLKSQHNKVSVLAGFKDMLKFLDGTNNAVYISETLKYKGG*
Ba1_1036409	Ba1_10364092	F079376	MFDTMITRQPGRPCVSLGVTRVCRTTEEVGRQMRHRESDSFVVPVKAGNAAGGKEATHVSAM*
Ba1_1038387	Ba1_10383871	F025288	MKNKWIWITLSVILLLGLIAGAGALGYLMGLRNANALALQGDDNTPSPRQQIPGMRDGLIIRRPAAFIGYFFLFPLRLLLGLAVLLLVVWLVVKVAKAAWDGGNHKAKSTEATVSSAGIETIVTEAPASPSEPTNTVGSDQQ*
Ba1_1069077	Ba1_10690771	F029922	SIDVLDKRMISGLPTLSREELYNFNIIDLSEMIMAIEHAISYTEGYRFLLLCFGNEGSSDKAKMIMKSMEDYLELVKDVYRFKVNEKKKRMAFLKGEFVRG*

Scaffold ID

Protein ID

Family

Sequence

Ba1_1000178

Ba1_10001781

F023356

MSENSLKKAVLKSRASAAEAEVMSTELKKSKVITLRVEEPLFKAIEAQAELWNVKPAETIRRVLRFYFLPGALEMQLRGESEKFWKGELTPEALREYMVFTLEATGKLSSSALFLKGEASRLSEALEGKLSEALKEEREGAEP*

Ba1_1000178

Ba1_10001785

F048287

MIDTLKLMLSDYEVSPESSVRVQPASYEVATGEKVEYPLFRNEAGTFYGSKAYLNTENWNLTLKPLPAGNRGVGAFLQFSVPKNYYGSNYFSVGEAGTRAALKKVEGELVQNGVFTNLEEAELSRIDTFKNIEPEEPFSSYFSLFSLLKARRAQQRGYGTTFLVANSSQEFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRTLYGFTRVNELFHGGYEVVKEKQVESWKNSLFSFSAEEVVVLGSKQLEQEMKAFQEKFGSNWFQYFLKSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVLTREEGSSKTLGELYEELRGKVCELAGRN*

Ba1_1000195

Ba1_100019511

F048390

MVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQQGGNVAITVQPAGKGKFSILLSPVEE*

Ba1_1002162

Ba1_10021622

F092111

MTPEEGNDVREMVWEMSRTTNKILIFGIILILAILAVLIYLGILSFPSLAN*

Ba1_1002337

Ba1_10023373

F029455

MTESKRIVDIDLWEDGTADRLPKITVTGAGLRFEGERAEFDRLCLILGGWLKP*

Ba1_1002337

Ba1_10023378

F038519

MKFRKSIIMQMHVIAYEPSADWAGPYTNQELLKRTLAIIQQVDRTAEVISKETDPWAEQILAGLLPYKIHVDLVDGMPQLPAAVSITWPPAQLEGIQIGSQEFREYFVWAKSEVAALRKLATLNKTPSAAKPAAATEEA*

Ba1_1013457

Ba1_10134574

F103105

VIPAPYNSWPVVMSTNKAAQLLGVDRKTLAKNKNMLARCSETIGGKSKVIRDRLLRELKII*

Ba1_1020657

Ba1_10206572

F095523

MGVSIPIEYLYITVGLLVVAVIYIINDKNNARLYNPEGPLFVKARKKEIPILRVIDPGTNHARHVLGDKERDDDPVYAKDMWGLHADPAYIEGDASPERHPGGLLIYNISPNVTFPISPRNVLAQQTILRHRHDLPEFADLDFLSDRDLLVLLSSPSDHLPHDAQIFTDNYKPTIVEIDESGQPVEVEMNAADLVERITAFKKYATTLPVEGGGFAYHEYFRNNPYGHSSQTTQRINYLFQKIADRKSAMADKLWTYGLIAIGLLGAVGVTIYIISLAAG*

Ba1_1021392

Ba1_10213921

F031475

LGSSMDAKTSDSSQDSLNANPQKQCEKLTQLDFLTLEMMGISLEELRALLDEEELQAYFAFLRRQSSDLDSTSP*

Ba1_1028087

Ba1_10280871

F070092

MAINDRLKPVMELLETNRQKIGLMISHGMASDLAIERRKKELYHEVMTAKENAFKEELADLEGEIRKIEDSYREPKKDPTTKLLEFEQIKAKIRSTPSKELKELTHKFQNTGAIPGIPWERPDHVDVLVAELRIRGLDEEADLTWDHAYNKLKVDRPWENNPLYKQLKSQHNKVSVLAGFKDMLKFLDGTNNAVYISETLKYKGG*

Ba1_1036409

Ba1_10364092

F079376

MFDTMITRQPGRPCVSLGVTRVCRTTEEVGRQMRHRESDSFVVPVKAGNAAGGKEATHVSAM*

Ba1_1038387

Ba1_10383871

F025288

MKNKWIWITLSVILLLGLIAGAGALGYLMGLRNANALALQGDDNTPSPRQQIPGMRDGLIIRRPAAFIGYFFLFPLRLLLGLAVLLLVVWLVVKVAKAAWDGGNHKAKSTEATVSSAGIETIVTEAPASPSEPTNTVGSDQQ*

Ba1_1069077

Ba1_10690771

F029922

SIDVLDKRMISGLPTLSREELYNFNIIDLSEMIMAIEHAISYTEGYRFLLLCFGNEGSSDKAKMIMKSMEDYLELVKDVYRFKVNEKKKRMAFLKGEFVRG*

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300003535: Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences