3300003535: Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1

Overview

Basic Information

• IMG/M Taxon OID: 3300003535
• GOLD Reference (Study | Sequencing Project | Analysis Project): Gs0112330 | Gp0107643 | Ga0060329
• Sample Name: Petroleum reservoir microbial communities from Reconcavo Basin, Brazil, analyzing oil degradation - Bahia-well BA- 1
• Sequencing Status: Permanent Draft
• Published?: N
• Use Policy: Open

Dataset Contents

• Total Genome Size: 88315047
• Sequencing Scaffolds: 11
• Novel Protein Genes: 13
• Associated Families: 13

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
All Organisms → cellular organisms → Bacteria	2
Not Available	3
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	1
All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon	1

Ecosystem and Geography

Ecosystem Assignment (GOLD)

• Name: Petroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation
• Type: Environmental
• Taxonomy: Environmental → Terrestrial → Unclassified → Unclassified → Unclassified → Petroleum Reservoir → Petroleum Reservoir Microbial Communities From Reconcavo Basin, Brazil, Analyzing Oil Degradation

Alternative Ecosystem Assignments

• Environment Ontology (ENVO): terrestrial biome → oil reservoir → oil
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline)

Location Information

• Location: Brazil: State of Bahia
• Coordinates
  • Lat. (^o): -12.2
  • Long. (^o): -38.11
  • Alt. (m): N/A
  • Depth (m): 500 to 1000

Associated Families

Family	Category	Number of Sequences	3D Structure?
F023356	Metagenome / Metatranscriptome	210	Y
F025288	Metagenome / Metatranscriptome	202	N
F029455	Metagenome / Metatranscriptome	188	Y
F029922	Metagenome / Metatranscriptome	187	Y
F031475	Metagenome / Metatranscriptome	182	N
F038519	Metagenome	165	Y
F048287	Metagenome / Metatranscriptome	148	N
F048390	Metagenome / Metatranscriptome	148	Y
F070092	Metagenome	123	N
F079376	Metagenome / Metatranscriptome	116	Y
F092111	Metagenome / Metatranscriptome	107	Y
F095523	Metagenome / Metatranscriptome	105	N
F103105	Metagenome / Metatranscriptome	101	Y

Associated Scaffolds

Scaffold	Taxonomy	Length
Ba1_1000178	All Organisms → cellular organisms → Bacteria	2782
Ba1_1000195	Not Available	12769
Ba1_1002162	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	848
Ba1_1002337	Not Available	24572
Ba1_1013457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Syntrophomonadaceae → Syntrophomonas → Syntrophomonas wolfei	2235
Ba1_1020657	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon ADurb.Bin009	1258
Ba1_1021392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	566
Ba1_1028087	Not Available	941
Ba1_1036409	All Organisms → cellular organisms → Bacteria	762
Ba1_1038387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	709
Ba1_1069077	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Candidatus Methanofastidiosa → unclassified Candidatus Methanofastidiosa → Candidatus Methanofastidiosa archaeon	837

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ba1_1000178	Ba1_10001781	F023356	MSENSLKKAVLKSRASAAEAEVMSTELKKSKVITLRVEEPLFKAIEAQAELWNVKPAETIRRVLRFYFLPGALEMQLRGESEKFWKGELTPEALREYMVFTLEATGKLSSSALFLKGEASRLSEALEGKLSEALKEEREGAEP*
Ba1_1000178	Ba1_10001785	F048287	MIDTLKLMLSDYEVSPESSVRVQPASYEVATGEKVEYPLFRNEAGTFYGSKAYLNTENWNLTLKPLPAGNRGVGAFLQFSVPKNYYGSNYFSVGEAGTRAALKKVEGELVQNGVFTNLEEAELSRIDTFKNIEPEEPFSSYFSLFSLLKARRAQQRGYGTTFLVANSSQEFCVYDKLQEMREHGLETSELPETMRFEHRALKKEKVRTLYGFTRVNELFHGGYEVVKEKQVESWKNSLFSFSAEEVVVLGSKQLEQEMKAFQEKFGSNWFQYFLKSYGAYSLAKFAGKEVVRAALENLNSERTKVWRTMKLLEEAERELLVLTREEGSSKTLGELYEELRGKVCELAGRN*
Ba1_1000195	Ba1_100019511	F048390	MVRFVRTLQHRVTPQGRDFYALSIPPQVAEALGLQQGGNVAITVQPAGKGKFSILLSPVEE*
Ba1_1002162	Ba1_10021622	F092111	MTPEEGNDVREMVWEMSRTTNKILIFGIILILAILAVLIYLGILSFPSLAN*
Ba1_1002337	Ba1_10023373	F029455	MTESKRIVDIDLWEDGTADRLPKITVTGAGLRFEGERAEFDRLCLILGGWLKP*
Ba1_1002337	Ba1_10023378	F038519	MKFRKSIIMQMHVIAYEPSADWAGPYTNQELLKRTLAIIQQVDRTAEVISKETDPWAEQILAGLLPYKIHVDLVDGMPQLPAAVSITWPPAQLEGIQIGSQEFREYFVWAKSEVAALRKLATLNKTPSAAKPAAATEEA*
Ba1_1013457	Ba1_10134574	F103105	VIPAPYNSWPVVMSTNKAAQLLGVDRKTLAKNKNMLARCSETIGGKSKVIRDRLLRELKII*
Ba1_1020657	Ba1_10206572	F095523	MGVSIPIEYLYITVGLLVVAVIYIINDKNNARLYNPEGPLFVKARKKEIPILRVIDPGTNHARHVLGDKERDDDPVYAKDMWGLHADPAYIEGDASPERHPGGLLIYNISPNVTFPISPRNVLAQQTILRHRHDLPEFADLDFLSDRDLLVLLSSPSDHLPHDAQIFTDNYKPTIVEIDESGQPVEVEMNAADLVERITAFKKYATTLPVEGGGFAYHEYFRNNPYGHSSQTTQRINYLFQKIADRKSAMADKLWTYGLIAIGLLGAVGVTIYIISLAAG*
Ba1_1021392	Ba1_10213921	F031475	LGSSMDAKTSDSSQDSLNANPQKQCEKLTQLDFLTLEMMGISLEELRALLDEEELQAYFAFLRRQSSDLDSTSP*
Ba1_1028087	Ba1_10280871	F070092	MAINDRLKPVMELLETNRQKIGLMISHGMASDLAIERRKKELYHEVMTAKENAFKEELADLEGEIRKIEDSYREPKKDPTTKLLEFEQIKAKIRSTPSKELKELTHKFQNTGAIPGIPWERPDHVDVLVAELRIRGLDEEADLTWDHAYNKLKVDRPWENNPLYKQLKSQHNKVSVLAGFKDMLKFLDGTNNAVYISETLKYKGG*
Ba1_1036409	Ba1_10364092	F079376	MFDTMITRQPGRPCVSLGVTRVCRTTEEVGRQMRHRESDSFVVPVKAGNAAGGKEATHVSAM*
Ba1_1038387	Ba1_10383871	F025288	MKNKWIWITLSVILLLGLIAGAGALGYLMGLRNANALALQGDDNTPSPRQQIPGMRDGLIIRRPAAFIGYFFLFPLRLLLGLAVLLLVVWLVVKVAKAAWDGGNHKAKSTEATVSSAGIETIVTEAPASPSEPTNTVGSDQQ*
Ba1_1069077	Ba1_10690771	F029922	SIDVLDKRMISGLPTLSREELYNFNIIDLSEMIMAIEHAISYTEGYRFLLLCFGNEGSSDKAKMIMKSMEDYLELVKDVYRFKVNEKKKRMAFLKGEFVRG*