Metagenome / Metatranscriptome Family F101572

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101572
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	100 residues
Representative Sequence	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Number of Associated Samples	101
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.77 %
% of genes near scaffold ends (potentially truncated)	69.61 %
% of genes from short scaffolds (< 2000 bps)	98.04 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.059 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.765 % of family members)
Environment Ontology (ENVO)	Unclassified (22.549 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.078 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.91% β-sheet: 0.00% Coil/Unstructured: 44.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13340	DUF4096	27.45
PF13586	DDE_Tnp_1_2	2.94
PF01548	DEDD_Tnp_IS110	2.94
PF13546	DDE_5	1.96
PF02371	Transposase_20	1.96
PF03401	TctC	0.98
PF01609	DDE_Tnp_1	0.98
PF03466	LysR_substrate	0.98
PF05598	DUF772	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	4.90
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.98
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.98
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.98
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.98
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.98
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.98
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.06 %
Unclassified	root	N/A	1.96 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.67 %
Unclassified	root	N/A	1.96 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.76 %
Unclassified	root	N/A	1.96 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.98 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.94 %
Unclassified	root	N/A	1.96 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.98 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Pleomorphomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae	0.98 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.98 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Pleomorphomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas	0.98 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.98 %
Paracoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.98 %
Paracoccus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.98 %
Paracoccus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.98 %
Paracoccus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.98 %
Paracoccus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.98 %
Paracoccus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.98 %
Paracoccus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.98 %
Paracoccus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Caryophyllales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales	0.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.98 %
Paracoccus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Amaranthaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae	0.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.98 %
Paracoccus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	1.96 %
Bosea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae → Bosea	0.98 %
Pleomorphomonas koreensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	0.98 %
Paracoccus halophilus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000043\|ARcpr5yngRDRAFT_c012992	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300001471\|JGI12712J15308_10046202	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300001593\|JGI12635J15846_10122288	All Organisms → cellular organisms → Bacteria	1837	Open in IMG/M
3300001976\|JGI24752J21851_1003079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2205	Open in IMG/M
3300002074\|JGI24748J21848_1025158	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300002076\|JGI24749J21850_1016980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Pleomorphomonadaceae → Pleomorphomonas → Pleomorphomonas koreensis	1023	Open in IMG/M
3300002155\|JGI24033J26618_1018925	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005177\|Ga0066690_10547673	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300005335\|Ga0070666_10199820	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300005339\|Ga0070660_100615352	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005341\|Ga0070691_10485511	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300005353\|Ga0070669_100307570	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300005354\|Ga0070675_100525092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1068	Open in IMG/M
3300005364\|Ga0070673_100645491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	968	Open in IMG/M
3300005365\|Ga0070688_100671430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	800	Open in IMG/M
3300005367\|Ga0070667_100855385	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005543\|Ga0070672_100158760	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300005547\|Ga0070693_100112609	All Organisms → cellular organisms → Bacteria	1676	Open in IMG/M
3300005617\|Ga0068859_100835495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1007	Open in IMG/M
3300005713\|Ga0066905_100192997	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300005764\|Ga0066903_108495676	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300005843\|Ga0068860_100792871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	960	Open in IMG/M
3300005901\|Ga0075274_1061067	All Organisms → cellular organisms → Bacteria → Proteobacteria	592	Open in IMG/M
3300006051\|Ga0075364_10761488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300006176\|Ga0070765_100225458	All Organisms → cellular organisms → Bacteria	1711	Open in IMG/M
3300006176\|Ga0070765_101851197	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300006579\|Ga0074054_12000517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300006580\|Ga0074049_12087857	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300006604\|Ga0074060_11870834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300006605\|Ga0074057_11545348	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300006844\|Ga0075428_102085973	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300006845\|Ga0075421_101007332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Paracoccus → Paracoccus halophilus	942	Open in IMG/M
3300006847\|Ga0075431_100381994	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300006852\|Ga0075433_10915876	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300006871\|Ga0075434_101495303	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300007076\|Ga0075435_101979387	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300009094\|Ga0111539_10419307	All Organisms → cellular organisms → Bacteria	1559	Open in IMG/M
3300016357\|Ga0182032_10372378	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300016422\|Ga0182039_10665461	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300017939\|Ga0187775_10017234	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300017955\|Ga0187817_10513219	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300018482\|Ga0066669_10603786	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300020579\|Ga0210407_11094607	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae → Bosea	604	Open in IMG/M
3300021078\|Ga0210381_10141816	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300021180\|Ga0210396_11004872	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300021181\|Ga0210388_11679313	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300021344\|Ga0193719_10460971	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300021420\|Ga0210394_10182769	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300021477\|Ga0210398_11492154	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300021953\|Ga0213880_10124429	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300022534\|Ga0224452_1288506	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300022756\|Ga0222622_11227856	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300022889\|Ga0247785_1009410	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300022892\|Ga0247753_1053820	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300023066\|Ga0247793_1040904	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300023072\|Ga0247799_1055399	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300023073\|Ga0247744_1018906	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300024177\|Ga0247686_1028171	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300024222\|Ga0247691_1058662	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300024245\|Ga0247677_1023518	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300024310\|Ga0247681_1048076	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300025711\|Ga0207696_1107577	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300025898\|Ga0207692_10629273	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300025903\|Ga0207680_10170438	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300025910\|Ga0207684_11617400	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300025921\|Ga0207652_10635560	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300025925\|Ga0207650_11185351	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300025934\|Ga0207686_10965559	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300025960\|Ga0207651_10516418	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300026088\|Ga0207641_11580943	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300026485\|Ga0256805_1059085	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300026666\|Ga0208574_100617	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300026690\|Ga0207494_101824	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300026936\|Ga0207585_102585	Not Available	540	Open in IMG/M
3300027010\|Ga0207839_1032962	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300027071\|Ga0209214_1061641	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300027576\|Ga0209003_1071660	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300027665\|Ga0209983_1089946	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300027684\|Ga0209626_1157264	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300027767\|Ga0209655_10169296	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300027787\|Ga0209074_10176859	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300027884\|Ga0209275_10356849	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300027909\|Ga0209382_10977891	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300028146\|Ga0247682_1063891	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300028812\|Ga0247825_10429342	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300028878\|Ga0307278_10304138	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300028881\|Ga0307277_10399766	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300028906\|Ga0308309_10693885	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300031740\|Ga0307468_101913634	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300031771\|Ga0318546_10915826	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031823\|Ga0307478_10658962	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300031854\|Ga0310904_10840910	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031892\|Ga0310893_10118218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	994	Open in IMG/M
3300031910\|Ga0306923_12509529	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300031912\|Ga0306921_11993546	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031943\|Ga0310885_10381740	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031954\|Ga0306926_11171833	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300032003\|Ga0310897_10169997	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300032892\|Ga0335081_11680665	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300032897\|Ga0335071_11619788	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300033290\|Ga0318519_10621492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	69.61%
Host-Associated	Host-Associated	30.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.73%
Plants	Host-Associated → Plants	30.39%
Aquatic	Environmental → Aquatic	5.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.82%
Freshwater	Environmental → Aquatic → Freshwater	3.92%
Sediment	Environmental → Aquatic → Sediment	1.96%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.98%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.20%
Loam	Environmental → Terrestrial → Soil → Loam	18.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.76%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.94%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.98%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000043	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere	Host-Associated	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300002074	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1	Host-Associated	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300002155	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7	Host-Associated	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005901	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300024310	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK22	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026485	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 F6	Environmental	Open in IMG/M
3300026666	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN351 (SPAdes)	Environmental	Open in IMG/M
3300026690	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A4a-11 (SPAdes)	Environmental	Open in IMG/M
3300026936	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A2-12 (SPAdes)	Environmental	Open in IMG/M
3300027010	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 64 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARcpr5yngRDRAFT_0129921	3300000043	Arabidopsis Rhizosphere	GIERFVDGMLYLSAGDAGDHGLTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
JGI12712J15308_100462023	3300001471	Forest Soil	MLYFPGRGARDCGFTTVLLNLATDGLAVVALVTEHVFGIAVDLLHQGGKGGDIVGLARRNHNADRQALGVGAGVDFGREAAARTTERVALGPPFPPAAQ*
JGI12635J15846_101222883	3300001593	Forest Soil	MLYFPARYAGDHSLATASLDVAANGVAVVAFVAEHLLRIAVDVVHQGWIGGDVMGLTRRDHDADWQALGVGPGIDFGREAATRTTERVAL
JGI24752J21851_10030793	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	MLGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
JGI24748J21848_10251582	3300002074	Corn, Switchgrass And Miscanthus Rhizosphere	EPLDAVTQGIERFVDGMLYLSAGDAGDHGLTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
JGI24749J21850_10169803	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	EPLDAVTQGIERFVDGMLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
JGI24033J26618_10189252	3300002155	Corn, Switchgrass And Miscanthus Rhizosphere	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDXDGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0066690_105476732	3300005177	Soil	CAIEETLDAVAQGIDRFVDGMLYLPRRCAGDDGLAAALLDVAANGFAVVALIAEHLFGVAVDFLHQGRKGGDIVGLPGRDYDADRQTLGVGVGVDFGREAAAPTAERIALDAPFPPAAQ*
Ga0070666_101998202	3300005335	Switchgrass Rhizosphere	MLYLSAGDAGDHGLTPALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0070660_1006153521	3300005339	Corn Rhizosphere	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0070691_104855111	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	LTTALLDVLANGFAIVALVAKHLFGIAVDIVHQGRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0070661_1017398802	3300005344	Corn Rhizosphere	RSIEEAFDAITQGIKSLVDGMLYFPGRCAGNCGFATAFLYVIADGFAVVALVTEHLFRIAVDLLHQGRKRGDVVCLPGRNHNADWQALGVGAGVDFGREAAA*
Ga0070669_1003075702	3300005353	Switchgrass Rhizosphere	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQGRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0070675_1005250922	3300005354	Miscanthus Rhizosphere	MLYLSAGDAGDHGLTPALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAERTAERVTLGPPLWMARPSQLSW*
Ga0070673_1006454911	3300005364	Switchgrass Rhizosphere	HGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPLWMARPSQRSW*
Ga0070688_1006714301	3300005365	Switchgrass Rhizosphere	KSLVDGMLYFPGRCAGDCGFTTAFLNVVADGFAVVALITEHLFRIAVDLLHQGRKRGDVVCLPGRNHNADWQALGVGAGVDFGGEAAARATERVALGPPLPPAAQ*
Ga0070667_1008553851	3300005367	Switchgrass Rhizosphere	ALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0070672_1001587603	3300005543	Miscanthus Rhizosphere	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQGRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPLWMARPSQLSW*
Ga0070693_1001126091	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MLYLSAGDAGDHGLTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0068859_1008354951	3300005617	Switchgrass Rhizosphere	LNAIEEPLDAVTQGIERFVDGMLYLSAGDAGDHGLTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0066905_1001929974	3300005713	Tropical Forest Soil	MLYFPVRSAGNCGFTTAFLNLVANGLAVVAPVTEHLFRIALDLLHQGRKRGDVVCLPGRNHNADWQALGVGAGVDFGREAAARATERVALGPPLPPAAQ*
Ga0066903_1084956761	3300005764	Tropical Forest Soil	NLVDGMLYFPRCGASDCGFPTSLLNLVANGFAVVALVAEHLFWIAVDLLHQGRKGGDIVRLPGRNHDADRQALGVGAGVDLGREAAARTTERIAFGPPFPPAAQ*
Ga0068860_1007928711	3300005843	Switchgrass Rhizosphere	HGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0075274_10610671	3300005901	Rice Paddy Soil	GLAATVVNILANGLAVITFVAEHLLGIAVDLVHQRLNGGHVVGLAGRDYDADGQALSIGASIDLRREAAARTAERVAPGSPLPPAAQ*
Ga0075364_107614881	3300006051	Populus Endosphere	DAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIAHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0070765_1002254584	3300006176	Soil	MLYFPGRGAGNFSFTTALLNFIANGLAVVALVTEHLVRIAVDLLHQGREGGDIVRLPRRNHDADRQALGVGAGVDLGREAAARTTERVALGPPFPPAAQ*
Ga0070765_1018511972	3300006176	Soil	AALLNVAADGLAVVGLVTEHLFRVTVDLLHQGWERSDIVRLPWRNHDSDRQAVGVGAGIDFGREAAARTTERVAPGPPFPPAAQ*
Ga0074054_120005172	3300006579	Soil	PTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0074049_120878571	3300006580	Soil	DHGPTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0074060_118708342	3300006604	Soil	EPLDAVTQGIERFVDGMLYLSAGDAGDHGPTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0074057_115453482	3300006605	Soil	GDHGPTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0075428_1020859731	3300006844	Populus Rhizosphere	HGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDGDGQALGIGACIDLGREAAERTAERVTLGPPLWMARPSQLSW*
Ga0075421_1010073321	3300006845	Populus Rhizosphere	SAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIAHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0075431_1003819943	3300006847	Populus Rhizosphere	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIAHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0075433_109158762	3300006852	Populus Rhizosphere	DHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQGRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ*
Ga0075434_1014953031	3300006871	Populus Rhizosphere	VDGMLYFPGRCAGDCGFTTAFLNVVTDGFAVVALVTEHLFRIAVDLPHQGRKSGDIVCLPRRNHDADWQTLGVGAGVDFGREAAARTTERVALNPPFPPAAQ*
Ga0075435_1019793872	3300007076	Populus Rhizosphere	GMLYFPGRCAGDCGFTTAFLNVVADGFAVVALITEHLFRIAVDLLHQGRKRGDVVCLPGRNHNADWQALGVGAGVDFGGEAAARATERVALGPPLPPAAQ*
Ga0111539_104193072	3300009094	Populus Rhizosphere	GLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGGIVGLAGRDHDADGQALGIGACIDLGREAVARTAERVTDSRLLFAEGSLDSRTVDR*
Ga0182032_103723783	3300016357	Soil	MLYFPARQAWDHRLATALPDIPANGFAVVSLIAEHLFGIAVDVVHQGRIGGDIVSLARRDLDANRETVGIGAGVDLGREAATGTTERVARGPPFPPPAQ
Ga0182039_106654611	3300016422	Soil	NLVANGFAIVALVTEHLFGITVDLLHQGRKGGDIVRLPRRNDDADRQAFGVGAGVDLGREAAARTAERVALGPPFPPAAQ
Ga0187775_100172345	3300017939	Tropical Peatland	MLYFPGRRAGNCGFTTAFLYVIADGFAVVALVTEHLFRIAVDLLHQGRKRGDIVCLPGRNHNADWQALGVGAGVDFGREAAARTTERVALGPPFPPAAQ
Ga0187817_105132191	3300017955	Freshwater Sediment	MDKTVRICALNDADGFAVVALVTEHLFRIAVDLLHQGRKRGDIVCLPGRNHNADWQALGVGAGVDFGREAAARATERVALGPPFPPAAQ
Ga0066669_106037862	3300018482	Grasslands Soil	VIEEPLDAVAQGIERFIDCMLYLSARDARDHGSAATVLDILANGFAVVAFVAKHLLGIAVDLVHQRLNGGHVVDLAGRDHDADGQALSVSARIDLGREAATRTAERVALGSPFPPAAQ
Ga0210407_110946072	3300020579	Soil	MLYFAGRGAGDCGLTTALLNVAADGLTVVALVTEHLFGITVDLLHQGRKRGDIVRLPWRNHDPDWQALGVGAGINFGREAAARTTERVALGPPFPPAEQ
Ga0210381_101418162	3300021078	Groundwater Sediment	MLDLPTGDTGDHGLTTALRDVLANGFAIVALVSEHLFGIAVDVVHQRRNGGDIVGLAGRDHDADRQTFGGGAGIDLGREAAARTAERVTLGSPFPPAAQ
Ga0210396_110048722	3300021180	Soil	EEALDAIAQAIESLVDGMLYFTGRGAGDCGLTAALLNVAADGLAVVALVTEHLFGITVNLLHQGRKRGDVVRLPWRNHDPDWQALGIGAGIDFGREAAARTTERVALGPPFPPAAQ
Ga0210388_116793131	3300021181	Soil	IPSNGLAVVSLIAEHLLGIAVDIVHQGRIGGDIVDLAGRNLNANRQTIGIGAGVDLGREATARTAERVAPGPPFPPPAQ
Ga0193719_104609712	3300021344	Soil	FVDGMLYLPRRCAGDDGLAAALLDVAANGFAVVALVAEHLFGVAVDFLHHGRKGGDIVGLPGRDYDADRQTLGVGAGVDFGREAAARTAERIALDPPFPPAAQ
Ga0210394_101827692	3300021420	Soil	DAISQAIESLVDGMLYFAGRGAGDCGLTTALLNVAADGLTVVALVTEHLFGITVDLLHQGRKRGDIVRLPWRNHDPDWQALGVGAGINFGREAAARTTERVALGPPFPPAEQ
Ga0210398_114921541	3300021477	Soil	TAALLNVAADGLAVVALVTEHLFGITVNLLHQGRKRGDVVRLPWRNHDPDWQALGIGAGIDFGREAAARTTERVALGPPFPPAAQ
Ga0213880_101244291	3300021953	Exposed Rock	TIEEPLNAVAQGIKRFVDGMLHLTAGDAGDHGLTAALLNVLAYRLAVVPLVSKHLFRIAVDGMHQRRNSGDIMGLAGSDHDPDWQALSVGARVDLAREAAARTAERVTLGSPFPPAAQ
Ga0224452_12885062	3300022534	Groundwater Sediment	AALLDVAANGFAVVALVAEHLFGVAVDFLHQGRKGGDIVGLPGRDYDADRQTLGVGAGVDFGREAAARTAERIALDPPFPPAAQ
Ga0222622_112278562	3300022756	Groundwater Sediment	FIDSVLYLARRCAGDDGLAIALLDVAANGFAVVALVAEHLFGVAVDFLHQGRKGGDIVGLPGRDYDADRQTLGVGAGVDFGREAAARTAERIALDPPFPPAAQ
Ga0247785_10094102	3300022889	Soil	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQGRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0247753_10538202	3300022892	Soil	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPLWMAR
Ga0247793_10409041	3300023066	Soil	AITEGIERFVDGMLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0247799_10553992	3300023072	Soil	GDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0247744_10189062	3300023073	Soil	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0247686_10281711	3300024177	Soil	HGPTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0247691_10586621	3300024222	Soil	GPTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0247677_10235182	3300024245	Soil	MLYLSAGDAGDHGLTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0247681_10480761	3300024310	Soil	AQNIKSLVDDMLYFPVRSAGNCGFTTAFLNVVANGLAVVAPVTQHLFRIAVDLLHQGRKRGDVVCLPGRNHNADWQALGVGAGVDFGGEAAARATERVALGPPLPPAAQ
Ga0207696_11075772	3300025711	Switchgrass Rhizosphere	SAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0207692_106292732	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	IEEAFDAIAQGIKSLVDGMLYFPGRCAGDCGFTTAFLNVVTDGFAVVALVTEHLFRIAVDLPHQGRKSGDIVCLPRRNHDADWQTLGVGAGVDFGREAAARTTERVALNPPFPPAAQ
Ga0207680_101704382	3300025903	Switchgrass Rhizosphere	MLYFPGRRAGNCGFATAFLYVIADGFAVVALVTEHLFRIAVDLLHQGRKRGDVVCLPGRNHNADWQALGVGAGVDFGGEAAARATERVALGPPLPPAAQ
Ga0207684_116174002	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTQGIERFVDGMLYLSAGDAGDHGLTTALLDVLANGFAIVAPVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0207652_106355602	3300025921	Corn Rhizosphere	MLGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0207650_111853511	3300025925	Switchgrass Rhizosphere	PALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0207686_109655591	3300025934	Miscanthus Rhizosphere	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0207651_105164183	3300025960	Switchgrass Rhizosphere	MLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPLWMARPSQLSW
Ga0207641_115809432	3300026088	Switchgrass Rhizosphere	GDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0256805_10590852	3300026485	Sediment	DAIAQGIESLIDGVLYFPGRGAGDCGFAAALLDVVADGFTVVALVAEHLLGITVDLLHQGRKGGDIVGLSGRNHDADRQTIGVRPGIDLGREAAARTAERVALSPPFPPAAQ
Ga0208574_1006172	3300026666	Soil	LNAIEEPLDAVTQGIERFVDGMLYLSAGDAGDHGPTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0207494_1018241	3300026690	Soil	DGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0207585_1025851	3300026936	Soil	MLGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAERTAERVTLGPPLWMARPSQLSW
Ga0207839_10329622	3300027010	Tropical Forest Soil	IEEALDAIAQGIESLVDGMLYFPGRGAGDFGFTTALRNVAADGLAVVALVTEHLFGIAVDFLHQRRKGGDIVRLPRRHHDADRQALGVGAGVDFCREAAARTTERVALGPPFPPAAQ
Ga0209214_10616411	3300027071	Forest Soil	YFPRRGAGDCGFTTALLNLATDGFAVVSLITEHLFGIAVDFLHQGRKGSDIVRLPGRNHDADRQGLGVGAGVDFGREAAARTTERVALGAPFPPAAQ
Ga0209003_10716602	3300027576	Forest Soil	ESLVDGMLYFPRRGAGDCGFTTALLNLATDGFAVVSLITEHLFGIAVDFLHQGRKGSDIVRLPGRNHDADRQGLGVGAGVDFGREAAARTTERVALGAPFPPAAQ
Ga0209983_10899462	3300027665	Arabidopsis Thaliana Rhizosphere	AARWARTGRINQADLWAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0209626_11572641	3300027684	Forest Soil	VDGMLYFTGRGAGDCGLTTALLNVAADRLAIVALVTEHLFGITVDLLHQRRKRGDIVRLPWGNHDPDWQALGVGAGIDFGREAAARTTERVALGPPFPPAAQ
Ga0209655_101692962	3300027767	Bog Forest Soil	MLYFTAGQAWDHGLATTLLDIPSNGLAVVSLIAEHLLGIAVDIVHQGRIGGDIVDLAGRNLNADRQTIGIGAGVDLGREATARTAERVAPGPPFPPPAQ
Ga0209074_101768591	3300027787	Agricultural Soil	QSIKSLVDDMLYFPVRSAGNCGFTTAFLNLVANGLAVVAPVTEHLFRIALDLLHQGRKRGDVVCLPGRNHNPDWQALGVGAGVDFGGEAAARATERVALGPPLPPAAQ
Ga0209275_103568492	3300027884	Soil	MLYFTGRGAGDCGLTAALLNVAADGLAVVALVTEHLFGITVNLLHQGRKRGDVVRLPWRNHDPDWQALGIGAGIDFGREAAARTTERVALGPPFPPAAQ
Ga0209382_109778913	3300027909	Populus Rhizosphere	GDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAERTAERVTLGPPLWMARPSQLSW
Ga0247682_10638911	3300028146	Soil	YFPGRCAGDCGFTTAFLNVVADGFAVVALITEHLFRIAVDLLHQGRKRGDVVCLPGRNHNADWQALGVGAGVDFGGEAAARATERVALGPPLPPAAQ
Ga0247825_104293423	3300028812	Soil	AIEESLDAVAQGIKRFVDDMLYLPASDAGDHGLTTALLNVLANGFAIIALVAKHLFRIAVDIVHQRRNGGDIVGLAGRDHDADGQALGVGACIDLGREAAARTAERVTLGSPFPPAAQ
Ga0307278_103041381	3300028878	Soil	RCAGDDGLAAALLDVAANGFAIVALVAEHLFGVAVDFLHQGRKGGDIVGLPGRDYDADRQTLGVGAGVDFGREAAARTAERIALDPPFPPAAQ
Ga0307277_103997661	3300028881	Soil	QGIDRFVDGMLYLPRRCAGDDGLAAALLDVAANGFAVVALIAEHLFGVAVDFLHQGRKGGDIVGLPGRDYDADRQTLGVGAGVDFGREAAARTAERIALDPPFPPAAQ
Ga0308309_106938852	3300028906	Soil	MLYFPGRGAGNFSFTTALLNFIANGLAVVALVTEHLVRIAVDLLHQGREGGDIVRLPRRNHDADRQALGVGAGVDLGREAAARTTERVALGPPFPPAAQ
Ga0307468_1019136342	3300031740	Hardwood Forest Soil	LDAVAQRIKRFVDCMLYLPGRDAGDHGFTTALLDVLANGFAVVAFVAEHPFGIAVDVVHQCWNGGDIVSLAGRDHDADRQALNIGASIDLGREAAARTAERVALAAPFPPAAQ
Ga0318546_109158261	3300031771	Soil	QAIEEALDPIAQRIDGFVDDLLYFAACGGGDYGLAAAFLDLLADGRTVVAVVAEHLLGIVINFVHQCRKGGDIVGLARRDHDADRQALGIGAGIDLGREAATRTAERIALGAPFPPAAQ
Ga0307478_106589622	3300031823	Hardwood Forest Soil	MLYFTGRGAGDCGLTTALLNVAADRLAIVALVTEHLFGITVDLLHQRRKRGDIVRLPWGNHDPDWQALGVGAGIDFGREAAARTTERVALGPPFPPAAQ
Ga0310904_108409101	3300031854	Soil	PGRCAGDCGFTTAFLNVVADGFAVVALITEHLFRIAVDLLHQGRKRGDVVCLPGRNHNADWQALGVGAGVDFGGEAAARATERVALGPPLPPAAQ
Ga0310893_101182181	3300031892	Soil	TQGIERFVDGMLYLSAGDAGDHGLTTALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0306923_125095292	3300031910	Soil	CSFTTALLNLAADGFAVVALVTEHLFRITVDLLHQDRKGGDIVRLPRRDHDPDRQALGVGAGVDFGREAAARATERVALSPPFPPAAQ
Ga0306921_119935461	3300031912	Soil	PIAQRIDGFVDDLLYFAACGGGDYGLAAAFLDLLADGRTVVAVVAEHLLGIVINFVHQCRKGGDIVGLARRDHDADRQALCIGAGIDLGREAAARTAERIALGAPFPPAAQ
Ga0310885_103817401	3300031943	Soil	IEEPLDAVTQGIERFVDGMLYLSAGDAGDHGPTPALLDVLANGFAIVALVAKHLFGIAVDLVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0306926_111718332	3300031954	Soil	MLYFSGRGAGDCGFTTALLNLVANGFAIVALVTEHLFGITVDLLHQGRKGGDIVRLPRRNDDADRQAFGVGAGVDLGREAAARTAERVALGPPFPPAAQ
Ga0310897_101699972	3300032003	Soil	AGDHGLTPALLDVLANGFAIVALVAKHLFGIAVDIVHQRRNGGDIVGLAGRDHDADGQALGIGACIDLGREAAARTAERVTLGPPFPPAAQ
Ga0335081_116806651	3300032892	Soil	PIAQGVDGFVDGSLFFAACGGGDYGFAAAFLDLLANGRTVVALVAEHLLGIVIKFMHQGRKGGDIVSLPRRDHDADWQALDIGAGVDLGREAATRTAERVTLGAPFPPAAQ
Ga0335071_116197882	3300032897	Soil	ALLDLLANGFAVVALVAEHLLKIAVTVVHQSRNGGDIMSLAGRDHDADWQALGVGAGIDLGREAATRTAERVALASPFPPAAQ
Ga0318519_106214921	3300033290	Soil	GIESLVDGMLYFPGREARNCGFTTALFDLTANGFAVIALVTEHLFGIAVNLLHQGRKGGDIVRLPRRDHDPDRQALGVGAGVDFGREAAARTTERIALGPPFPPAAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101572

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences