Metagenome / Metatranscriptome Family F099429

Overview

Basic Information

• Family ID: F099429
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 103
• Average Sequence Length: 49 residues
• Representative Sequence: LLLTPFLLGNSAGALGALVPLVIGAVIGLAVIIGIVWGLIKWLT
• Number of Associated Samples: 60
• Number of Associated Scaffolds: 103

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 58.82 %
• % of genes near scaffold ends (potentially truncated): 15.53 %
• % of genes from short scaffolds (< 2000 bps): 86.41 %
• Associated GOLD sequencing projects: 56
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (71.845 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (18.447 % of family members)
• Environment Ontology (ENVO): Unclassified (86.408 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (68.932 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 55.56%
  β-sheet: 0.00%
  Coil/Unstructured: 44.44%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF08291	Peptidase_M15_3	8.74
PF06941	NT5C	3.88
PF05488	PAAR_motif	2.91
PF13640	2OG-FeII_Oxy_3	2.91
PF02195	ParBc	2.91
PF06714	Gp5_OB	1.94
PF01521	Fe-S_biosyn	0.97
PF01812	5-FTHF_cyc-lig	0.97
PF02775	TPP_enzyme_C	0.97

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	3.88
COG4104	Zn-binding Pro-Ala-Ala-Arg (PAAR) domain, involved in Type VI secretion	Intracellular trafficking, secretion, and vesicular transport [U]	2.91
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	0.97
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.97
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.97

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
All Organisms	root	All Organisms	28.16 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Viruses	superkingdom	All Organisms → Viruses	25.24 %
cellular organisms	root	All Organisms → cellular organisms	2.91 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.91 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	0.97 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.24 %
Nitrospinae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.24 %
Nitrospinia	class	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.24 %
Nitrospinales	order	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.24 %
Nitrospinaceae	family	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	25.24 %
Nitrospina	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	0.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.97 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000142|LPaug09P16500mDRAFT_c1033576	Not Available	789
3300000222|LPjun09P12500mDRAFT_1059750	Not Available	607
3300000225|SI34jun09_120mDRAFT_1043651	Not Available	919
3300001683|GBIDBA_10096660	Not Available	929
3300001683|GBIDBA_10101440	Not Available	890
3300002177|JGI24816J26688_1067746	Not Available	612
3300002526|JGI24818J35693_1005059	All Organisms → cellular organisms → Bacteria → Proteobacteria	2763
3300002528|JGI24819J35694_1013618	Not Available	1774
3300003542|FS900DNA_10103020	All Organisms → Viruses → Predicted Viral	1450
3300003619|JGI26380J51729_10081889	Not Available	747
3300003978|Ga0063038_103570	All Organisms → Viruses → Predicted Viral	4719
3300003979|Ga0063037_104629	All Organisms → Viruses → Predicted Viral	3968
3300003981|Ga0063042_125064	All Organisms → Viruses → Predicted Viral	1130
3300005427|Ga0066851_10035326	All Organisms → Viruses → Predicted Viral	1758
3300006002|Ga0066368_10094411	Not Available	1031
3300006310|Ga0068471_1477706	All Organisms → Viruses → Predicted Viral	1052
3300006338|Ga0068482_1155562	Not Available	773
3300006338|Ga0068482_1240253	Not Available	823
3300006338|Ga0068482_1296411	Not Available	885
3300006338|Ga0068482_1456984	Not Available	834
3300006338|Ga0068482_1685266	Not Available	761
3300006339|Ga0068481_1305914	All Organisms → cellular organisms → Bacteria	829
3300006340|Ga0068503_10112226	Not Available	544
3300006340|Ga0068503_10263054	Not Available	766
3300006340|Ga0068503_10393813	All Organisms → Viruses → Predicted Viral	1219
3300006340|Ga0068503_10395952	Not Available	1076
3300006341|Ga0068493_10128554	Not Available	512
3300006900|Ga0066376_10778547	Not Available	519
3300006902|Ga0066372_10064931	Not Available	1812
3300006902|Ga0066372_10100980	All Organisms → Viruses → Predicted Viral	1489
3300006902|Ga0066372_10190454	Not Available	1118
3300006902|Ga0066372_10325045	Not Available	874
3300006902|Ga0066372_10380358	Not Available	812
3300007514|Ga0105020_1007074	Not Available	12254
3300007515|Ga0105021_1029878	All Organisms → Viruses → Predicted Viral	4169
3300007756|Ga0105664_1134225	Not Available	547
3300007758|Ga0105668_1021652	Not Available	688
3300017775|Ga0181432_1101986	Not Available	855
3300017775|Ga0181432_1150370	Not Available	716
3300017775|Ga0181432_1159783	Not Available	696
3300017775|Ga0181432_1199918	Not Available	626
3300017775|Ga0181432_1283876	Not Available	524
3300017775|Ga0181432_1309207	Not Available	502
3300020271|Ga0211631_1127335	Not Available	505
3300020383|Ga0211646_10058358	All Organisms → Viruses → Predicted Viral	1456
3300020383|Ga0211646_10196786	Not Available	719
3300020383|Ga0211646_10313528	Not Available	554
3300020389|Ga0211680_10170569	Not Available	853
3300020398|Ga0211637_10336097	Not Available	599
3300020399|Ga0211623_10087872	All Organisms → Viruses → Predicted Viral	1066
3300020399|Ga0211623_10385603	Not Available	500
3300020412|Ga0211552_10296694	Not Available	590
3300020426|Ga0211536_10175659	Not Available	834
3300020427|Ga0211603_10036024	Not Available	1822
3300020427|Ga0211603_10150575	Not Available	864
3300020434|Ga0211670_10297178	Not Available	668
3300020435|Ga0211639_10141004	Not Available	1009
3300020444|Ga0211578_10099426	All Organisms → Viruses → Predicted Viral	1129
3300020458|Ga0211697_10099749	Not Available	1206
3300021442|Ga0206685_10008312	All Organisms → Viruses → Predicted Viral	3210
3300021443|Ga0206681_10054649	Not Available	1552
3300021443|Ga0206681_10390827	Not Available	536
3300025547|Ga0209556_1055615	Not Available	964
3300025667|Ga0209043_1032010	All Organisms → Viruses → Predicted Viral	1727
3300026209|Ga0207989_1042927	All Organisms → Viruses → Predicted Viral	1297
3300027622|Ga0209753_1030654	Not Available	1606
3300027622|Ga0209753_1092339	Not Available	749
3300027630|Ga0209432_1067886	All Organisms → Viruses → Predicted Viral	1040
3300027630|Ga0209432_1179370	Not Available	603
3300027677|Ga0209019_1017823	All Organisms → Viruses → Predicted Viral	2654
3300027677|Ga0209019_1035155	Not Available	1673
3300027699|Ga0209752_1018992	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Nitrospinae → Nitrospinia → Nitrospinales → Nitrospinaceae → Nitrospina	2634
3300028190|Ga0257108_1164793	Not Available	640
3300028192|Ga0257107_1026934	All Organisms → Viruses → Predicted Viral	1828
3300028192|Ga0257107_1047368	Not Available	1331
3300028487|Ga0257109_1216255	Not Available	537
3300028488|Ga0257113_1189223	Not Available	606
3300031757|Ga0315328_10025303	Not Available	3186
3300031801|Ga0310121_10466045	Not Available	705
3300031801|Ga0310121_10533441	Not Available	645
3300031861|Ga0315319_10495787	Not Available	610
3300031861|Ga0315319_10634902	Not Available	526
3300031886|Ga0315318_10547981	Not Available	657
3300032019|Ga0315324_10094764	All Organisms → Viruses → Predicted Viral	1121
3300032048|Ga0315329_10033941	All Organisms → Viruses → Predicted Viral	2419
3300032048|Ga0315329_10084768	All Organisms → Viruses → Predicted Viral	1588
3300032048|Ga0315329_10263063	Not Available	913
3300032048|Ga0315329_10403709	Not Available	728
3300032278|Ga0310345_10027383	All Organisms → Viruses → Predicted Viral	4788
3300032278|Ga0310345_10084794	Not Available	2745
3300032278|Ga0310345_10104067	All Organisms → Viruses → Predicted Viral	2487
3300032278|Ga0310345_10357481	All Organisms → Viruses → Predicted Viral	1368
3300032278|Ga0310345_10708014	Not Available	976
3300032278|Ga0310345_11357614	Not Available	695
3300032360|Ga0315334_10623670	Not Available	931
3300032360|Ga0315334_11149187	Not Available	671
3300032360|Ga0315334_11490325	Not Available	580
3300032360|Ga0315334_11676451	Not Available	542
3300032820|Ga0310342_100414617	All Organisms → Viruses → Predicted Viral	1474
3300032820|Ga0310342_100861945	All Organisms → Viruses → Predicted Viral	1053
3300032820|Ga0310342_101934944	Not Available	705
3300032820|Ga0310342_101979319	Not Available	697

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	50.49%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	19.42%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.53%
Strait	Environmental → Aquatic → Marine → Strait	6.80%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	5.83%
Coastal	Environmental → Aquatic → Marine → Coastal	1.94%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	34.95%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	19.42%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.53%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	13.59%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.80%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	3.88%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	1.94%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	1.94%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	18.45%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	15.53%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	15.53%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	11.65%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	9.71%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	6.80%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.80%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	3.88%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.94%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	1.94%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.94%
Diffuse Hydrothermal Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Vent	1.94%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	1.94%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.97%
Diffuse Hydrothermal Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Vent	0.97%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000142	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - August 2009 P16 500m	Environmental
3300000222	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500m	Environmental
3300000225	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 34 06/16/09 120m	Environmental
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental
3300002177	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_250m	Environmental
3300002526	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m	Environmental
3300002528	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_800m	Environmental
3300003542	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNA	Environmental
3300003619	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA	Environmental
3300003978	Diffuse hydrothermal vent microbial communities from Menez Gwen hydrothermal field, Mid Atlantic ridge - MGW_C	Environmental
3300003979	Diffuse hydrothermal vent microbial communities from Menez Gwen hydrothermal field, Mid Atlantic ridge - MGW_B	Environmental
3300003981	Diffuse hydrothermal vent microbial communities from Menez Gwen hydrothermal field, Mid Atlantic ridge - MGW_A	Environmental
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental
3300007514	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate a	Environmental
3300007515	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 2.7-0.2um, replicate b	Environmental
3300007756	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assembly	Environmental
3300007758	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assembly	Environmental
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental
3300020271	Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX556013-ERR599096)	Environmental
3300020383	Marine microbial communities from Tara Oceans - TARA_B100000929 (ERX556043-ERR598971)	Environmental
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental
3300020398	Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)	Environmental
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental
3300020412	Marine microbial communities from Tara Oceans - TARA_B100001167 (ERX556053-ERR599047)	Environmental
3300020426	Marine microbial communities from Tara Oceans - TARA_B100000378 (ERX555992-ERR599112)	Environmental
3300020427	Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555922-ERR598960)	Environmental
3300020434	Marine microbial communities from Tara Oceans - TARA_B100001013 (ERX555944-ERR599071)	Environmental
3300020435	Marine microbial communities from Tara Oceans - TARA_B100000586 (ERX556070-ERR599086)	Environmental
3300020444	Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)	Environmental
3300020458	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556123-ERR599000)	Environmental
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental
3300021443	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015	Environmental
3300025547	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_150m_DNA (SPAdes)	Environmental
3300025667	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S4LV_100m_DNA (SPAdes)	Environmental
3300026209	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)	Environmental
3300027622	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m (SPAdes)	Environmental
3300027630	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_800m (SPAdes)	Environmental
3300027677	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_300m (SPAdes)	Environmental
3300027699	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_250m (SPAdes)	Environmental
3300028190	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_1000m	Environmental
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental
3300028487	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000m	Environmental
3300028488	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_1320m	Environmental
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental
3300031861	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 3416	Environmental
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental
3300032019	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 21515	Environmental
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPaug09P16500mDRAFT_10335761	3300000142	Marine	MKLLLFVPFLLGNSAGGLAGLGALVVAGIIGLGAIIAVIWGLIKWLA*
LPjun09P12500mDRAFT_10597502	3300000222	Marine	MTKYLLPLIPFLLGNSAGAAGAMAELFIIAAVGLAIIIGI
SI34jun09_120mDRAFT_10436512	3300000225	Marine	MKLLLLTPFLLGNSAPVGALIPLLLGGLLGLGVIIGIIWAVIKWLS*
GBIDBA_100966601	3300001683	Hydrothermal Vent Plume	MKHPERLFILLLLSLIFLLGNSAGGLAGLGALVIGAVIGLGAIIAIIWGLIKWLA*
GBIDBA_101014401	3300001683	Hydrothermal Vent Plume	MKILLLVPFLLGNSAGGLAGLGALVIGAVIGLGAIIAIIWGLIKWLA*
JGI24816J26688_10677463	3300002177	Marine	MTKYLLPLIPFLLGNSAGAVGAMTTVFILAAIALAIIIGIIWGLIKWLS*
JGI24818J35693_10050598	3300002526	Marine	IIWSKTMTKYLLPLIPFLLGNSAGAMGAMVELFIIAAVGLAIIIGIIWGLIKWLS*
JGI24819J35694_10136182	3300002528	Marine	MTKYLLPLIPFLLGNSAGAMGAMVELFIIAAVGLAIIIGIIWGLIKWLS*
FS900DNA_101030201	3300003542	Diffuse Hydrothermal Flow Volcanic Vent	MKYLLALTPFLLGNSAGAIGPLVSLFIGAVIGLTVIIGIIWF
JGI26380J51729_100818891	3300003619	Marine	MKSLLFVPFILGNSAPVGALIPLLLGGLLGLGVIIGIIWAVIKWLS*
Ga0063038_1035701	3300003978	Diffuse Hydrothermal Vent	MNKLLLLLIPFLLGNSAGGLGGLVILAGGAIIGLGVIIGIVWGLIRWLT*
Ga0063037_10462910	3300003979	Diffuse Hydrothermal Vent	MNKLLLLLIPFLLGNSAGGLGGLVILAGGAIIGLGVIIGIIWGLIKWLT*
Ga0063042_1250642	3300003981	Diffuse Hydrothermal Vent	MKTLLVAITTPFLLGNSAGALGALVPLLIGAAIGLAVIIGIVWGLIKWLT*
Ga0066851_100353265	3300005427	Marine	MKLLLLTPFLLGNSAPVGALIPLLLGGLLGLGVIIGIIWAVIKWLSS*
Ga0066368_100944115	3300006002	Marine	MKYLLALTPFLLGNSAGAIGALTSLFIGAVIAVVVVGVIIWFIIKWVT*
Ga0068471_14777062	3300006310	Marine	MNKLFVAITTPFLLGNSAGALGALVPLLIGAVFGLAVIIGIVYGLVKWLT*
Ga0068482_11555622	3300006338	Marine	MNRLILITLLAIFTLGNSAGGLGGLVFLAGGAIIGLGVIIGIIWGLIKWLS*
Ga0068482_12402532	3300006338	Marine	MKTLILLTIPFLLGNSAGGLGGLVFLAGGAIIGLGVIIGIIWGLIKWLT*
Ga0068482_12964113	3300006338	Marine	MKTLILAISLPVILGNSAGALGALLPLIVGAVIGLGVIIAIVWGLIKWLT*
Ga0068482_14569841	3300006338	Marine	MTKILLLTPFLLGNSAGALGVLLPLVIGAVISLGVIIAIVWGLIKWLS*
Ga0068482_16852661	3300006338	Marine	NKLLFLLTPFILGNSAGALGALVPLLIGAAIGLAVIIGIVWGLIKWLS*
Ga0068481_13059142	3300006339	Marine	MKYLLALTPFLLGNSAGAIGALTSLFIGAVIAVIVVGVIIWAIIKWVT*
Ga0068503_101122262	3300006340	Marine	MNKLFVAITTPFILGNSAGALGALLPLIVGAVIGLAVIIGIVWGLIKWLT*
Ga0068503_102630543	3300006340	Marine	MNKLFIAITTPFLLGNSAGALGALLPLIVGAVIGLGVIIAIVWGLIKWLT*
Ga0068503_103938134	3300006340	Marine	MNNNGKILLLTPFILGNSAGALGALLPLVIGAVIGLGVIIGIVWGLIKWLT*
Ga0068503_103959522	3300006340	Marine	MKTLILAISLPVLLGNSAGALGALLPLAIGAVIGLAAIVGIIYGLIKWLS*
Ga0068493_101285542	3300006341	Marine	MKYLLALTPFLLGNSAGALGALGSLFIGAVIGLSVIIGVI
Ga0066376_107785471	3300006900	Marine	MKYLLALTPFLLGNSAGAIGELTSLFIGAVITVIVIGVIIWFIIKW
Ga0066372_100649316	3300006902	Marine	MKTLLVAITTPFLLGNSAPVGALIPLLIGGVIGLGVIIAIVWGLIKWLT*
Ga0066372_101009806	3300006902	Marine	MNNKGKILLLTPFLLGNSAGALGALVPLLIGAAIGLAVIIGIVWGLIKWLT*
Ga0066372_101904541	3300006902	Marine	NKLTSILILSLFLLGNSAGGLGGLVLLAGGAIIGLGVIIGIVWGLIRWLT*
Ga0066372_103250453	3300006902	Marine	MKGYLYGLLPVTPFLLGNSAGGLAGLGALVIAGVIGIGAIIAVIWGLIKWLA*
Ga0066372_103803583	3300006902	Marine	KEEMNKTLILAIITPFILGNSAGGLGGLVFLAGGALIGLGVIIGIIWGLIRWLS*
Ga0105020_10070743	3300007514	Marine	MRILLLTPFLLGNSAPVGALIPLLIGGVIGLGIIIGIIYGLIKWLT*
Ga0105021_10298781	3300007515	Marine	MINPYLILIPFLLGNSAPVGGLITLLIGGVLGIGIIIGIIYGLIRWLA*
Ga0105664_11342252	3300007756	Background Seawater	MTRTTGILLVPFLLGNSAGALGALLPLIVGAIIGLGVIIGIVWGLIKWLT*
Ga0105668_10216523	3300007758	Background Seawater	MTKTTSILLLTPFLLGNSAGALGALLPLAIGAIIGLGVIIGIIWGLIKWLT*
Ga0181432_11019863	3300017775	Seawater	MNNKGKILLLTPFLLGNSAGALGALVPLVIGAVIGLAVIIGIVWGLIKWLT
Ga0181432_11503702	3300017775	Seawater	MVIKGEYMKYLLALTPFLLGNSAGAIGALTSLIIGAVIGLSVIIGVIWLIIKWVT
Ga0181432_11597831	3300017775	Seawater	MTRISILLTPFLLGNSAGALGALLPLAIGAVIGLAAIVGIIYGLIKWLS
Ga0181432_11999182	3300017775	Seawater	MKTLTLLTVPFLLGNSAGGLGGLVVLAGGAIIGLGIIIGIIWGLIRWLS
Ga0181432_12620631	3300017775	Seawater	LVPFILFLLGNSAGGMGGLVILAGGAIIGLGVIIGIVWGLIRWLA
Ga0181432_12838761	3300017775	Seawater	MKTLLVAITTPFLLGNSAGALGALIPLLIGGVIGLGVIIAIVWGLIKWLT
Ga0181432_13092073	3300017775	Seawater	AITTPFLLGNSAGALGALVPLLIGAAIGLAVIIGIVWGLIKWLT
Ga0211631_11273352	3300020271	Marine	MTKYLLPLIPFLLGNSAGAMGAMVELFIIAAVGLAIIIGIIWGLIKWLS
Ga0211646_100583583	3300020383	Marine	MNKTLILAIITPFILGNSAGGLGGLVFLAGGALIGLGVIIGIIWGLIRWLS
Ga0211646_101967862	3300020383	Marine	MNNKGKILLLTPFLLGNSAGALGALVPLLIGAAIGLAVIIGIVWGLIKWLT
Ga0211646_103135281	3300020383	Marine	MKTLILAIITPFILGNSAGGLGGLVVLAGGAIIGLGVIIGIVWGLIRWLT
Ga0211680_101705692	3300020389	Marine	MKILLLTPFLLGNSAGGLIGALLPLVIGAVVGITVVVGIVWGIIKWLS
Ga0211637_103360972	3300020398	Marine	MTKYLLILIPFLLGNSAGALGALLPLLIGAVIGLGAIIAIVWGLIKWLT
Ga0211623_100878721	3300020399	Marine	MSKLLLLLTPFLLGNSAGGLGGLLVLVVTCIIAVGAVIAILWGLAKWLL
Ga0211623_103856031	3300020399	Marine	MKTLLVAITTPFLLGNSAGALGALVPLLIGAAIGLAVIIGIVWGLIKWLT
Ga0211552_102966941	3300020412	Marine	MNKLLLLLIPFLLGNSAGGLGGLVILAGGAIIGLGVIIGIIWGLIRWLT
Ga0211536_101756592	3300020426	Marine	MNRLILITLLAIFTLGNSAGGLGGLVFLAGGAIIGLGVIIGIIWGLIKWLS
Ga0211603_100360242	3300020427	Marine	MTKYLLPLIPFLLGNSAGAIGAMTTVFILAAIALAIIIGIIWGLIKWLS
Ga0211603_101505752	3300020427	Marine	MNKEYLYSILLTPFLLGNSAPVGAIIPLLIGAVFGLAVIIGIVYGLVKWLT
Ga0211670_102971781	3300020434	Marine	MKTLLVAITTPFLLGNSAGALGALVPLLIGAAIGLAVIIGIVWGLIK
Ga0211639_101410042	3300020435	Marine	MKTLLVAITTPFLLGNSAPVGALIPLLIGGVIGLGVIIAIVWGLIKWLT
Ga0211578_100994262	3300020444	Marine	MKLLLFVPFLLGNSAGGLAGLGALVIAGVIGLGALVAIIWGLAKWLF
Ga0211697_100997492	3300020458	Marine	MKYLLALTPFLLGNSAGAIGALTSLFIGAVIAVIVVGVIIWLIIKWVT
Ga0206685_1000831210	3300021442	Seawater	MKLLLFVPFLLGNSAGGLAGLGALVIGAVIGLAAIIAIIWGLIKWLT
Ga0206681_100546493	3300021443	Seawater	MTKYLLPLIPFLLGNSAGAAGAMAELFIIAAVGLAIIIGIIWGLIKWLS
Ga0206681_103908272	3300021443	Seawater	MKLLLLVPFLLGNSAGGLAGLGALVIGAVIGLAAIIAIIWGLIKWLT
Ga0209556_10556152	3300025547	Marine	MKLLLLTPFLLGNSAPVGALIPLLLGGLLGLGVIIGIIWAVIKWLS
Ga0209043_10320106	3300025667	Marine	MKSLLLTPFLLGNSAPVGALIPLLLGGLLGLGVIIGIIWAVIKWLS
Ga0207989_10429274	3300026209	Marine	MKLLLLTPFLLGNSAPVGALIPLLLGGLLGLGVIIGIIWAVIKWLSS
Ga0209753_10306544	3300027622	Marine	MKTLILVSSTPFILGNSAPVGALIPLLIGGVIGLGVIIGIVWGLIKWLT
Ga0209753_10923393	3300027622	Marine	MNKLFVAITTPFILGNSAGALGALVPLIVGAVIGLGVIIAIVWGLIKWLT
Ga0209432_10678864	3300027630	Marine	MRILLLTPFILGNSAGALGALVPLVVGAVIGLAVIIGIVWGLIKWLT
Ga0209432_11793702	3300027630	Marine	MNKLFIAITTPFLLGNSAGALGALLPLIVGAVIGLAVIIGIVWGLIKWLT
Ga0209019_10178233	3300027677	Marine	MKTLLVAIITPFLLGNSAPVGALIPLLIGGVIGLGVIIAIVWGLIKWLT
Ga0209019_10351556	3300027677	Marine	LLLTPFLLGNSAGALGALVPLVIGAVIGLAVIIGIVWGLIKWLT
Ga0209752_10189923	3300027699	Marine	MTKYLLPLIPFLLGNSAGAVGAMTTVFILAAIALAIIIGIIWGLIKWLS
Ga0257108_11647932	3300028190	Marine	MKYLLALTPFLLGNSAGALGALGSLFIGAVIGLSVIIGIIWLIIKWVT
Ga0257107_10269343	3300028192	Marine	MKLLLFVPFLLGNSAGGLAGLGALVVAGIIGLGAIIAVIWGLIKWLA
Ga0257107_10473681	3300028192	Marine	MTRLILITLLAIFTLGNSAGGLGGLIVLAGGAIIGLIVCIGIVWGLIKWLS
Ga0257109_12162552	3300028487	Marine	MKYLLALTPFLLGNSAGAIGPLVSLFIGAVIGLTVIIGIIWFIIKWVT
Ga0257113_11892232	3300028488	Marine	MKILLLIPFLLGNSAGGLIGALIPLIIGAMIGLTVIIGIVWGLIKWLS
Ga0315328_100253036	3300031757	Seawater	MKGYLYGLLVPTTPFLLGNSAPVGALIPLLIGGVIGLGAIIGIVYGLIKWLT
Ga0310121_104660452	3300031801	Marine	MKYLLALTPFLLGNSAGAIGALTSLFIGAVIVVIVVGVIIWFIIKWVT
Ga0310121_105334411	3300031801	Marine	MKYLLALTPFLLGNSAGAIGALTSLFIGAVLVVIVVGVIIWFIIKWVT
Ga0315319_104957871	3300031861	Seawater	MKTLILAITTPFILGNSAGGLGGLALLAGGAIIGLGVIIGIVWGLIKWLS
Ga0315319_106349021	3300031861	Seawater	QMKLLLLVPFLLGNSAGGLAGLGALIIAAIIGLGAIIAIIWGLMKWLT
Ga0315318_105479811	3300031886	Seawater	MKLLLFVPFLLGNSAGGLAGLGALVIGAVIGLGAIIAVIWGLIKWLA
Ga0315324_100947642	3300032019	Seawater	MKLLLLVPFLLGNSAGGLAGLGALIIAAIIGLGAIIAIIWGLMKWLT
Ga0315329_100339416	3300032048	Seawater	MKTLILAITTPFILGNSAGGLGGLALLAGGAIIGLGVIIGIVWGLIRWLA
Ga0315329_100847683	3300032048	Seawater	MNKLILVTLLAILTLGNSAGGLGALLPLLIGAVIGLGVIIAICWGLIKWLT
Ga0315329_102630632	3300032048	Seawater	MNKLFVAITTPFILGNSAGALGALLPLIVGAVIGLGVIIAIVWGLIKWLT
Ga0315329_104037092	3300032048	Seawater	MTKLTSILIVVTLLPFILGNSAGGMGGLVILAGGAIIGLGICIGIVWGLIRWLA
Ga0310345_100273838	3300032278	Seawater	MTKTTILLLTPFILGNSAGALGALVPLVIGAVIGLAVIIGIVWGLIKWLT
Ga0310345_100847943	3300032278	Seawater	MNKLFVAITTPFLLGNSAGALGALVPLLIGAAIGLAVIIGIVWGLIKWLT
Ga0310345_101040673	3300032278	Seawater	MKTLILLTIPFLLGNSAGGLGGLVVLAGGAIIGLGVIIGIIWGLIKWLS
Ga0310345_103574813	3300032278	Seawater	MTRILLLTPFILGNSAGALGSLLPLAIGAIIGLGVIIGIIYGLIKWLT
Ga0310345_107080142	3300032278	Seawater	MKLLLLVPFILFILGNSAGGMGGLVILAGGAIIGLGVIIGIVWGLIKWLT
Ga0310345_113576143	3300032278	Seawater	MKLLLLVPFILFLLGNSAGGLGGLALLAGGAIIGLGVIIGIIWGLIRWL
Ga0315334_106236702	3300032360	Seawater	MVKLHSIKYLLVLTPFLLGNSAGALGALLPLAIGAIIGLAAIIGIVWGLIKWLS
Ga0315334_111491873	3300032360	Seawater	MKLLLLVPFILFLLGNSAGGMGGLVILAGGAIIGLGVIIGIVWGLIRWLA
Ga0315334_114903251	3300032360	Seawater	MKTLTLLTVPFLLGNSAGGLGGLVVLAGGAIIGLGVIIGIIWGLIRW
Ga0315334_116764511	3300032360	Seawater	MKTLILLTIPFLLGNSAGGLGGLVFLAGGAIIGLGVIIGIIWGLIKWLA
Ga0310342_1004146174	3300032820	Seawater	SDKDEKENEMKILLLTPFLLGNSAGALGALLPLIIGAVVGLGIVFGIVWGLIKWLS
Ga0310342_1008619451	3300032820	Seawater	MKLLLFVPFLLGNSAGGLAGLGALVVAGIIGIGALVAIIWGLAKWLF
Ga0310342_1019349443	3300032820	Seawater	MKTLTLLTVPFLLGNSAGGLGGLVVLAGGAIIGLGVIIGIIWGLIRWLS
Ga0310342_1019793192	3300032820	Seawater	MKTLLVAITTPFLLGNSAPVGALIPLFIGGVIGLGVIIAIVWGLIKWLT