Metagenome / Metatranscriptome Family F094972

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F094972
Family Type	Metagenome / Metatranscriptome
Number of Sequences	105
Average Sequence Length	78 residues
Representative Sequence	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSV
Number of Associated Samples	93
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	96.19 %
% of genes near scaffold ends (potentially truncated)	97.14 %
% of genes from short scaffolds (< 2000 bps)	98.10 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (95.238 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (30.476 % of family members)
Environment Ontology (ENVO)	Unclassified (46.667 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.476 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.93% β-sheet: 0.00% Coil/Unstructured: 74.07%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF00005	ABC_tran	2.86
PF01850	PIN	0.95
PF00512	HisKA	0.95
PF13620	CarboxypepD_reg	0.95

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.24 %
All Organisms	root	All Organisms	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.24 %
cellular organisms	root	All Organisms → cellular organisms	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.24 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.24 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.95 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.95 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.95 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002652\|Ga0005484J37272_102082	Not Available	589	Open in IMG/M
3300002655\|Ga0005476J37264_104920	Not Available	502	Open in IMG/M
3300002656\|Ga0005494J37277_102766	Not Available	587	Open in IMG/M
3300002659\|Ga0005474J37262_111308	Not Available	568	Open in IMG/M
3300002668\|Ga0005482J37270_101855	Not Available	585	Open in IMG/M
3300002673\|Ga0005480J37268_101493	Not Available	590	Open in IMG/M
3300002873\|Ga0006865J43189_100668	Not Available	555	Open in IMG/M
3300003674\|Ga0006876_100356	Not Available	592	Open in IMG/M
3300004115\|Ga0058890_104653	Not Available	590	Open in IMG/M
3300004121\|Ga0058882_1032563	Not Available	566	Open in IMG/M
3300004131\|Ga0058898_1011788	Not Available	571	Open in IMG/M
3300004134\|Ga0058906_1337458	Not Available	576	Open in IMG/M
3300004139\|Ga0058897_11086529	Not Available	506	Open in IMG/M
3300004294\|Ga0068945_1196425	Not Available	531	Open in IMG/M
3300004294\|Ga0068945_1200077	Not Available	553	Open in IMG/M
3300004474\|Ga0068968_1005785	Not Available	589	Open in IMG/M
3300004475\|Ga0068969_1007095	Not Available	594	Open in IMG/M
3300004486\|Ga0068951_173307	Not Available	581	Open in IMG/M
3300004488\|Ga0068920_189375	Not Available	576	Open in IMG/M
3300004505\|Ga0068941_1000709	Not Available	554	Open in IMG/M
3300004554\|Ga0068959_1001452	Not Available	586	Open in IMG/M
3300004559\|Ga0068942_1008100	Not Available	569	Open in IMG/M
3300004559\|Ga0068942_1199860	Not Available	525	Open in IMG/M
3300004607\|Ga0068948_1012908	Not Available	574	Open in IMG/M
3300004608\|Ga0068924_1001071	Not Available	549	Open in IMG/M
3300004964\|Ga0072331_1002263	Not Available	579	Open in IMG/M
3300005534\|Ga0070735_10274200	Not Available	1020	Open in IMG/M
3300007327\|Ga0075016_1414240	Not Available	562	Open in IMG/M
3300007526\|Ga0075022_1686792	Not Available	536	Open in IMG/M
3300011021\|Ga0138529_105624	Not Available	577	Open in IMG/M
3300011028\|Ga0138577_125123	Not Available	561	Open in IMG/M
3300011035\|Ga0138542_117528	Not Available	569	Open in IMG/M
3300011042\|Ga0138586_152256	Not Available	572	Open in IMG/M
3300011055\|Ga0138550_166953	Not Available	559	Open in IMG/M
3300011056\|Ga0138538_1040020	Not Available	559	Open in IMG/M
3300011060\|Ga0138583_1098497	Not Available	588	Open in IMG/M
3300011062\|Ga0138582_1008333	Not Available	580	Open in IMG/M
3300011066\|Ga0138524_1025234	Not Available	595	Open in IMG/M
3300011067\|Ga0138594_1021082	Not Available	591	Open in IMG/M
3300011072\|Ga0138563_1012246	Not Available	569	Open in IMG/M
3300011073\|Ga0138584_1067219	Not Available	551	Open in IMG/M
3300011076\|Ga0138574_1009354	Not Available	593	Open in IMG/M
3300011076\|Ga0138574_1086989	Not Available	553	Open in IMG/M
3300011083\|Ga0138560_1019747	Not Available	567	Open in IMG/M
3300011086\|Ga0138564_1018726	Not Available	598	Open in IMG/M
3300016701\|Ga0181509_1093512	Not Available	585	Open in IMG/M
3300018062\|Ga0187784_10062074	All Organisms → cellular organisms → Bacteria	3028	Open in IMG/M
3300018086\|Ga0187769_10382585	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300019187\|Ga0184584_112063	Not Available	558	Open in IMG/M
3300019211\|Ga0187799_1036866	Not Available	582	Open in IMG/M
3300019211\|Ga0187799_1087527	Not Available	583	Open in IMG/M
3300019211\|Ga0187799_1093051	Not Available	586	Open in IMG/M
3300019230\|Ga0181501_1171182	Not Available	583	Open in IMG/M
3300019240\|Ga0181510_1147834	Not Available	580	Open in IMG/M
3300019242\|Ga0181502_1335753	Not Available	585	Open in IMG/M
3300019251\|Ga0187795_1217377	Not Available	582	Open in IMG/M
3300019251\|Ga0187795_1340203	Not Available	517	Open in IMG/M
3300019265\|Ga0187792_1700807	Not Available	545	Open in IMG/M
3300019273\|Ga0187794_1191197	Not Available	583	Open in IMG/M
3300019275\|Ga0187798_1316515	Not Available	589	Open in IMG/M
3300019275\|Ga0187798_1406282	Not Available	574	Open in IMG/M
3300019278\|Ga0187800_1278977	Not Available	580	Open in IMG/M
3300019284\|Ga0187797_1091716	Not Available	533	Open in IMG/M
3300019284\|Ga0187797_1277605	Not Available	574	Open in IMG/M
3300021474\|Ga0210390_10252307	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300021855\|Ga0213854_1195859	Not Available	585	Open in IMG/M
3300021858\|Ga0213852_1138135	Not Available	584	Open in IMG/M
3300021858\|Ga0213852_1165250	Not Available	550	Open in IMG/M
3300021858\|Ga0213852_1545664	Not Available	541	Open in IMG/M
3300021860\|Ga0213851_1006873	Not Available	587	Open in IMG/M
3300021860\|Ga0213851_1405904	Not Available	573	Open in IMG/M
3300021861\|Ga0213853_11050802	Not Available	568	Open in IMG/M
3300021861\|Ga0213853_11137248	Not Available	567	Open in IMG/M
3300021929\|Ga0213845_1198626	Not Available	574	Open in IMG/M
3300022498\|Ga0242644_1030414	Not Available	578	Open in IMG/M
3300022500\|Ga0242643_110509	Not Available	668	Open in IMG/M
3300022505\|Ga0242647_1029421	Not Available	586	Open in IMG/M
3300022509\|Ga0242649_1022271	Not Available	766	Open in IMG/M
3300022510\|Ga0242652_1040974	Not Available	563	Open in IMG/M
3300022513\|Ga0242667_1058945	Not Available	504	Open in IMG/M
3300022525\|Ga0242656_1092103	Not Available	583	Open in IMG/M
3300022529\|Ga0242668_1009083	Not Available	1294	Open in IMG/M
3300022531\|Ga0242660_1114625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300022711\|Ga0242674_1047169	Not Available	584	Open in IMG/M
3300022718\|Ga0242675_1000095	Not Available	4673	Open in IMG/M
3300027867\|Ga0209167_10341319	Not Available	813	Open in IMG/M
3300029701\|Ga0222748_1046592	Not Available	732	Open in IMG/M
3300030589\|Ga0210255_10998598	Not Available	536	Open in IMG/M
3300030596\|Ga0210278_1222873	Not Available	500	Open in IMG/M
3300030743\|Ga0265461_13317046	Not Available	544	Open in IMG/M
3300030760\|Ga0265762_1128823	Not Available	585	Open in IMG/M
3300030761\|Ga0265722_104909	Not Available	579	Open in IMG/M
3300030763\|Ga0265763_1018691	Not Available	712	Open in IMG/M
3300030836\|Ga0265767_113698	Not Available	571	Open in IMG/M
3300030873\|Ga0265751_110195	Not Available	594	Open in IMG/M
3300030877\|Ga0265777_115959	Not Available	589	Open in IMG/M
3300030888\|Ga0265769_113339	Not Available	591	Open in IMG/M
3300030963\|Ga0265768_111426	Not Available	583	Open in IMG/M
3300030982\|Ga0265748_105926	Not Available	595	Open in IMG/M
3300031010\|Ga0265771_1019371	Not Available	578	Open in IMG/M
3300031042\|Ga0265749_104033	Not Available	548	Open in IMG/M
3300031044\|Ga0265747_109598	Not Available	590	Open in IMG/M
3300031677\|Ga0307480_1016285	Not Available	569	Open in IMG/M
3300032160\|Ga0311301_10960346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300032515\|Ga0348332_14131360	Not Available	588	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.71%
Aquatic	Environmental → Aquatic	14.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.76%
Freshwater	Environmental → Aquatic → Freshwater	14.29%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.48%
Loam	Environmental → Terrestrial → Soil → Loam	10.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.33%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	30.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.38%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	11.43%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	10.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.95%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.95%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002652	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF133 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002655	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF125 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002656	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF143 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002659	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF123 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002668	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF131 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002673	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF129 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002873	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 66 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003674	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 77 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004115	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF216 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004131	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF232 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004134	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF248 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004294	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 33 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004474	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004475	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004486	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 39 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004488	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004505	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 29 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004554	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 51 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004559	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004607	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004608	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 9 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004964	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 77 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300007327	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaT_ABR_2013 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007526	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaT_CSR_2012 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011021	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 7 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011028	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 64 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011035	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 23 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011042	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 76 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011055	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 31 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011056	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 16 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011060	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011062	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 72 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011066	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 3 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011067	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 41 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011072	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011073	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011076	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011083	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 45 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011086	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019211	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019230	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019242	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019251	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019273	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021855	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_18 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021929	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - DR:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022500	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022505	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030589	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR019SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030596	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO085SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030761	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030836	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030873	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030877	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030888	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030963	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030982	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031010	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031042	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031044	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031677	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0005484J37272_1020821	3300002652	Forest Soil	MSPLPDFVSALLAATVSPLPSRDFYIPLRIAAFDAACHLKAYLLELPDFPSLPAGLPLLTSGRRIIVPGPLLLTRFVCSVN
Ga0005476J37264_1049201	3300002655	Forest Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTKFDCS
Ga0005494J37277_1027661	3300002656	Forest Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTKFDCSVN
Ga0005474J37262_1113081	3300002659	Forest Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTKFDC
Ga0005482J37270_1018551	3300002668	Forest Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTKFDCSV
Ga0005480J37268_1014931	3300002673	Forest Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTRFDCSVNL
Ga0006865J43189_1006681	3300002873	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSVN
Ga0006876_1003561	3300003674	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSVNL
Ga0058890_1046531	3300004115	Forest Soil	MSPLPDFVSALLAATVSPLPSRDFYIPLRIAAFDAACHLKAHLLELPDFPSLPAGLPLLTSGRRIIVPGPLLLTRFVCSVN
Ga0058882_10325631	3300004121	Forest Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTRFDC
Ga0058898_10117881	3300004131	Forest Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTRFDCSVN
Ga0058906_13374581	3300004134	Forest Soil	MSPLPDFVSALLAATVSPLPSRDFYIPLRIAAFDAACHLKAYLLELPDFPSLPAGLPLLTSGRRIIVPGPLLLTRFVCSVNL
Ga0058897_110865292	3300004139	Forest Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTRFDCSV
Ga0068945_11964252	3300004294	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCS
Ga0068945_12000772	3300004294	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFDCS
Ga0068968_10057851	3300004474	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFDCSVN
Ga0068969_10070951	3300004475	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFDCSVNL
Ga0068951_1733071	3300004486	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRFRRLAV
Ga0068920_1893751	3300004488	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSRSEE
Ga0068941_10007092	3300004505	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWQIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFDCS
Ga0068959_10014521	3300004554	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFDCSV
Ga0068942_10081001	3300004559	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSDR
Ga0068942_11998602	3300004559	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGT
Ga0068948_10129082	3300004607	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSVNLL
Ga0068924_10010712	3300004608	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLT
Ga0072331_10022631	3300004964	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSVNLLE
Ga0070735_102742001	3300005534	Surface Soil	LIAFPALRVDTEPPLPSRDFYIPLQIAAFDSAFHSKIHLCELPDSPSLPVSFMLLTISLRIIVPGPLRLTKFDCSVNLLEP*
Ga0075016_14142401	3300007327	Watersheds	MSPLPDFVSAFLASVESPLPSRDSYVPLRIAAFDSACRSKAHLCKAPDFPSLPAGHSVLTISLRIIVPDSLLLTRSDC
Ga0075022_16867921	3300007526	Watersheds	MSPLPEFLPAPLAATVSPLPSRDFYVPLRIAAFDAACHLKAHLFELPDFPSLPAGLPLLTSGRQIIVPGSLLLTR
Ga0138529_1056242	3300011021	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFDC
Ga0138577_1251231	3300011028	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLR
Ga0138542_1175281	3300011035	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFDCT
Ga0138586_1522562	3300011042	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLILTRFDCS
Ga0138550_1669532	3300011055	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTL
Ga0138538_10400202	3300011056	Peatlands Soil	MSPLPDFAPAFPAATASPIPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFDC
Ga0138583_10984971	3300011060	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACSSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSVN
Ga0138582_10083331	3300011062	Peatlands Soil	MSPLPDFVPAFLAATGSPLPLGDFYIPLRIAAFDSACRSKAHLCELPDSLSLPAGVSLLTISLRIIVPGSLRITKFD
Ga0138524_10252341	3300011066	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKANLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFDCSVNL
Ga0138594_10210821	3300011067	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDADCRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSVN
Ga0138563_10122461	3300011072	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFD
Ga0138584_10672192	3300011073	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRF
Ga0138574_10093541	3300011076	Peatlands Soil	MSPLPDFVPVFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSVNL
Ga0138574_10869891	3300011076	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPG
Ga0138560_10197471	3300011083	Peatlands Soil	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRL
Ga0138564_10187261	3300011086	Peatlands Soil	MSPLPDFAPAFPAATASPLPLGDCYVPWRIAAFDSACRSKAHLFELPDFLSLPASLPLLTIDRRIIVPGTLLLTRFDCSVNLL
Ga0181509_10935121	3300016701	Peatland	MSPLPDFAPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKTHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSV
Ga0187784_100620743	3300018062	Tropical Peatland	MNPLPESVPAFRAEPQPPLPSGDFYLPLRIAAFDRVFRSKAHLTELPDFPSLPTGFSLLTISRWIIVPGPLLLTRFDCSVNLLEP
Ga0187769_103825851	3300018086	Tropical Peatland	MNPLPDFVPTLRAEPKSPLPLGDFYLPLRIAAFDSVFRSKARLFEPPDFPSLPGGISLLTIRLRIIVPGS
Ga0184584_1120632	3300019187	Soil	MSPLPDFLPALLAATVSTLPSRDFYIPLRIAAFDTAHRSKAHLFELPDFPSLLAGFPLLTSGRRIIVPGSL
Ga0187799_10368661	3300019211	Peatland	MGGIIAMNPLPDSFPALRAEPKSPLPPGDCYIPFRIAAFDSVFRSKAHLCDWPDFPSLPFGFSLVTISRRIIVPGSLPLTRLDCSV
Ga0187799_10875271	3300019211	Peatland	MSPLPNLVPAFLAATVSPLPSGDFYIPLRIAAFDAACRSKAHLFELPDFPSLPASRSLLTIGLRIIVPGSLPLTRFDCS
Ga0187799_10930511	3300019211	Peatland	MSPLPEFVPAFLADTVSPLPSGDFYIPLRIAAFDSACRSKAHLFELPDFPSLPTSRSLLTIGLRIIVPGSLPLTRFDCSVN
Ga0181501_11711821	3300019230	Peatland	MSPLPDFAPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKTHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCS
Ga0181510_11478341	3300019240	Peatland	MSPLPDFAPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKTHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDC
Ga0181502_13357531	3300019242	Peatland	MSPLPDFAPAFLTATVSPLPLGDFYIPLRIAAFDAACRSKTHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSV
Ga0187795_12173771	3300019251	Peatland	MNPLPDSVPAFRAEPQSPLPSGDFYIPLRIAAFDRVFRSKAHLTELPDFPSLPFGFSLLTISRWIIVPGSLLLTRFDCSV
Ga0187795_13402031	3300019251	Peatland	MSPLPDFRSRVSRGTQSPLPSGDSYLPLRIAAFDRVFRSKAQLTELPDFPSLPFGFSLLTISRWI
Ga0187792_17008071	3300019265	Peatland	MNPLPDSVPAVRADTKSPLPSRDFRIPLQIAAFDSAFHSKAHLYELPDSLSLPAGVSLLTIGLRIIVP
Ga0187794_11911971	3300019273	Peatland	MNPLPDSAPTFRAEPQSPLPSGDFYLPLRIAAFDSVFRSKAHLNKSPDFPSLPSGFSLLTISRWIIVPGSLLLTRFDCSVN
Ga0187798_13165151	3300019275	Peatland	MSPLPNLVPAFLAATVSPLPSGDFYIPLRIAAFDAACRSKAHLFELPDFPSLPASRSLLTIGLRIIVPGSLPLTRFDCSVN
Ga0187798_14062821	3300019275	Peatland	MNPLPDSFPTFRAEPESPLPSGDFYLPLQIAAFDPDFHSKVHLCDRPDFPSLPFGFSLLTISRGIIVPGSLLFTKFDCSV
Ga0187800_12789771	3300019278	Peatland	MNPLPDSFPTFRAEPESPLPSGDFYLPLQIAAFDPDFHSKVHLCERPDFPSLPFGFSLLTISRGIIVPGSLLFTKFDCS
Ga0187797_10917161	3300019284	Peatland	MSPLPNLVPAFLAATVSPLPSGDFYIPLRIAAFDAACRSKAHLFELPDFPSLPASRSLLTIGLRIIVPGSL
Ga0187797_12776051	3300019284	Peatland	MNPLPDSFPTFRAEPESPLPSGDFYLPLQIAAFDPDFHSKVHLCDEPDFPSLPLGFSLLTISRRIIVLGSLFFTRFDCSVN
Ga0210390_102523072	3300021474	Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTKFDCSVNL
Ga0213854_11958591	3300021855	Watersheds	MSPLPDFLPALLAATVSPLPSRDFYIPLRIAAFDAARHSKAHLFELPDFPSLLAGLPLLTSGRRIIVPGSLLLTRFVCSVN
Ga0213852_11381351	3300021858	Watersheds	MSPLPDFVSALLAATVSPLPSRDFYIPLRIAAFDAACHLKAHLLELPDFPSLPAGLPLLTSGHRIIVPGPLLLTRFVCS
Ga0213852_11652501	3300021858	Watersheds	MNPLPDSVPALLADTEPPLPSGDFYIPLQIAAFDSAFHSKAHLYELPDSPSLPVSFMLLTISLRIIVP
Ga0213852_15456641	3300021858	Watersheds	MSPLPDFVSAFLASVESPLPLGDFYVPLQIAAFDSACRSKAHLCESPDFPLLPAGHSLLTSCLRIIVPDSLLLTRSDCSVNL
Ga0213851_10068731	3300021860	Watersheds	MNPLPDSFPTFRTEPESPLPSGDFYLPLQIAAFDPTFRSKAHLFDWPDFPSLPIGFSLLTISRRIIVPGPLPLTRFDCSVN
Ga0213851_14059041	3300021860	Watersheds	MNPLLDFIPSLRAEPESPLPSGDFYIPLRIAAFDSACHSKAHLYELPDFPSLPVGFSLLTISLRIIVPGPLLLTRSDCS
Ga0213853_110508021	3300021861	Watersheds	MNPLLDFIPSLRAEPESPLPSGDFYIPLRIAAFDSACHSKAHLYELPDFPSLPVGFSLLTISLRIIVPGPLLLT
Ga0213853_111372481	3300021861	Watersheds	MSPLPDFLPAPLAATVSPLPSRDFYVPLRIAAFDAACHLKAPLFELPDFPSLPAGLPLLTSGRQIIVPGSLLLTRFVCSV
Ga0213845_11986261	3300021929	Watersheds	MSPLPDFVPAFLTATVSPLPSGDFYIPLRIAAFDAACRSKAHLCELPDFPSLPASRLLLTTGLRIIVPGSLRLTRFDCSV
Ga0242644_10304141	3300022498	Soil	MSPLPDFVPALLAATVSPLPSRDFYIPLRIAAFDAACHLKAYLLELPDFPSLPAGLPLLTSGRRIIVPGPLLLTRFV
Ga0242643_1105092	3300022500	Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLT
Ga0242647_10294211	3300022505	Soil	MSPLPDFVSALLAATVSPLPSRDFYIPLRIAAFDPACHLKAHLFELPDFPSLPAGLPLLTSGRRIIVPGPLLLTRFVCSV
Ga0242649_10222711	3300022509	Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTKF
Ga0242652_10409742	3300022510	Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTRFN
Ga0242667_10589451	3300022513	Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLPLTRFDCSV
Ga0242656_10921031	3300022525	Soil	MNPLPDSVPAFLADTEPPLPFSDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTKFDCSV
Ga0242668_10090832	3300022529	Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTKFDSSSRGW
Ga0242660_11146251	3300022531	Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTRFDCS
Ga0242674_10471691	3300022711	Soil	MSPLPDFVSALLAATVSPLPSRDFYIPLRIAAFDAACHLKAYLLELPDFPSLPAGLPLLTSGRRIIVPGPLLLTRFVCSV
Ga0242675_10000952	3300022718	Soil	MNPLPDSVPAFLTDTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTRFDPLLLR
Ga0209167_103413191	3300027867	Surface Soil	MNPLPDSFPTFRAEPESPLPSGDFYFPLQIAAFDPTFRSKAHLFDWPDFPSLPIGFSLLTISRRIIVPGPLPLTRFDCSVNLLEP
Ga0222748_10465922	3300029701	Soil	MNPLPDSVPAFLADTEPPLPFRDFYIPLQIAAFDSAFRSKAHLYELPDSPSLPVSFMLLTISLRIIVPGPLRLTRFDCSAGMHGTEFC
Ga0210255_109985982	3300030589	Soil	MSPLPDFVPALLAATVSPLPSRDFYIPLRIAAFDTACHSKAHLFELPDFPSLPAGLPLLTSGRRIIVPGPLLL
Ga0210278_12228731	3300030596	Soil	MSPLPDFLPALLAATVSTLPSRDFYIPLRIAAFDTAHRSKAHLFELPDFPSLLAGFPLLTSGRRIIVPGSLLLTRFVC
Ga0265461_133170462	3300030743	Soil	MSPLPDFVPALLAATVSPLPSRDFYIPLRIAAFDAACHSKAHLFELPDFPSLPAGLPLLTSGRRIIVPGPLLLT
Ga0265762_11288231	3300030760	Soil	MSPLPDFLPALLAATVSTLPSRDFYIPLRIAAFDTAHRSKAHLFELPDFPSLLAGFPLLTSGRRIIVPGSLLLTRFVCSVN
Ga0265722_1049091	3300030761	Soil	MSPLPDFLPALLAATVSTLPSRDFYIPLRIAAFDTAHRSKAHLFELPDFPSLLAGFPLLTSGRRIIVPGSLLLTRFV
Ga0265763_10186912	3300030763	Soil	MSPLPDFLPALLAATVSPLPSRDFYIPLRIAAFDAARHSKAHLFELPDFPSLLAGLPLLTSGRRIIVPGSLLLTRFVC
Ga0265767_1136982	3300030836	Soil	MSPLPDFLPALLAATVSTLPSRDFYIPLRIAAFDTAHRSKAHLFELPDFPSLLAGFPLLTSGRRIIVPGSLLLTRF
Ga0265751_1101951	3300030873	Soil	MSPLPDFLPAFLAATVSPLPSRDFYIPLRIAAFDAARHSKAHLFELPDFPSLLAGLPLLTSGRRIIVPGSLLLTRFVCSVNL
Ga0265777_1159592	3300030877	Soil	MSPLPDFLPALLAATVSPLPSRDFYIPLRIAAFDTAHRSKAHLFELPDFPSLLAGFPLLTSGRRIIVPGSLLLTRFVCSV
Ga0265769_1133391	3300030888	Soil	VLGGIIAMSPLPDFLPALLAATVSPLPSRDFYIPLRIAAFNAAHRSKAHLSELPDFPSLLAGLPLLTSGRRIIVPGSLLLTRFVCSVN
Ga0265768_1114261	3300030963	Soil	MSPLPDFLPAFLAATVSPLPSRDFYIPLRIAAFDAARHSKAHLFELPDFPSLLAGLPLLTSGRRIIVPGSLLLTRFVC
Ga0265748_1059261	3300030982	Soil	MSPLPDFLPALLAATVSPLPSRDFYIPLRIAAFDAARHSKAHLFELPDFPSLLAGLPLLTSGRRIIVPGSLLLTRFVCSVNL
Ga0265771_10193711	3300031010	Soil	MSPLPDFLPAFLAATVSPLPSRDFYIPLRIAAFDAARHSKAHLFELPDFPSLLAGLPLLTSGRRIIVPGSLLLTRFVCS
Ga0265749_1040331	3300031042	Soil	MSPLPDFLPAFLAATVSPLPSRDFYIPLRIAAFNAAHRSKAHLSELPDFPSLLAGLPLLTSGRRIIV
Ga0265747_1095981	3300031044	Soil	MSPLPDFLPAFLAATVSPLPSRDFYIPLRIAAFDAARHSKAHLFELPDFPSLLAGLPLLTSGRRIIVPGSLLLTRFVCSV
Ga0307480_10162851	3300031677	Hardwood Forest Soil	MNPSPDSFPALHADTEPPLPSGDFYLPLRIAAFDSDFRSKAHLYELPDSLSLPAGVSLLTISLRIIVPGPLLLARSDCSVN
Ga0311301_109603464	3300032160	Peatlands Soil	PPLPSRDFYVPLQIAAFDSAFRSKAHLCELPDSLSLPAGVSLLTISLRIIVPGSLLLTRFDCSVNLLEP
Ga0348332_141313602	3300032515	Plant Litter	MSPLPDFLPALLAATVSTLPSRDFYIPLRIAAFDTAHRSKAHLFELPDFPSLLAGFPLLTSGRRIIVPGSLLLTRFVCSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F094972

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences