Sample 3300002652

Basic Information
IMG/M Taxon OID	3300002652 Open in IMG/M
GOLD Reference (Study \| Sequencing Project \| Analysis Project)	Gs0085736 \| Gp0056700 \| Ga0005484
Sample Name	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF133 (Metagenome Metatranscriptome, Counting Only)
Sequencing Status	Permanent Draft
Sequencing Center	DOE Joint Genome Institute (JGI)
Published?	N
Use Policy	Open

Basic Information

IMG/M Taxon OID

GOLD Reference
(Study | Sequencing Project | Analysis Project)

Sample Name

Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF133 (Metagenome Metatranscriptome, Counting Only)

Sequencing Status

Permanent Draft

Sequencing Center

DOE Joint Genome Institute (JGI)

Published?

Use Policy

Open

Dataset Contents
Total Genome Size	5476077
Sequencing Scaffolds	42
Novel Protein Genes	46
Associated Families	41

Dataset Contents

Total Genome Size

5476077

Sequencing Scaffolds

Novel Protein Genes

Associated Families

Dataset Phylogeny
Taxonomy Groups	Number of Scaffolds
Not Available	35
All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	1
All Organisms → cellular organisms → Eukaryota	1
All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNR698	1
All Organisms → Viruses → Predicted Viral	1
All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia ambifaria	1
All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1

Dataset Phylogeny

Taxonomy Groups

Number of Scaffolds

Not Available

All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila

All Organisms → cellular organisms → Eukaryota

All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNR698

All Organisms → Viruses → Predicted Viral

All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus

All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia ambifaria

All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium

Ecosystem Assignment (GOLD)
Name	Forest Soil Microbial Communities From Harvard Forest Long Term Ecological Research (Lter) Site In Petersham, Ma, For Long-Term Soil Warming Studies
Type	Environmental
Taxonomy	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil → Forest Soil Microbial Communities From Harvard Forest Long Term Ecological Research (Lter) Site In Petersham, Ma, For Long-Term Soil Warming Studies

Ecosystem Assignment (GOLD)

Name

Forest Soil Microbial Communities From Harvard Forest Long Term Ecological Research (Lter) Site In Petersham, Ma, For Long-Term Soil Warming Studies

Type

Environmental

Taxonomy

Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil → Forest Soil Microbial Communities From Harvard Forest Long Term Ecological Research (Lter) Site In Petersham, Ma, For Long-Term Soil Warming Studies

Alternative Ecosystem Assignments
Environment Ontology (ENVO)	forest biome → land → forest soil
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline)

Alternative Ecosystem Assignments

Environment Ontology (ENVO)

forest biome → land → forest soil

Earth Microbiome Project Ontology (EMPO)

Free-living → Non-saline → Soil (non-saline)

Location Information
Location	Harvard Forest LTER, Petersham, MA, USA
Coordinates	Lat. (^o)	42.53312	Long. (^o)	-72.189707	Alt. (m)	N/A	Depth (m)	0 to .1
Location on Map

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Location Information

Location

Harvard Forest LTER, Petersham, MA, USA

Coordinates

Lat. (^o)

42.53312

Long. (^o)

-72.189707

Alt. (m)

N/A

Depth (m)

0 to .1

Location on Map

Zoom:

Family	Category	Number of Sequences	3D Structure?
F000203	Metagenome / Metatranscriptome	1619	Y
F000396	Metagenome / Metatranscriptome	1185	Y
F001233	Metagenome / Metatranscriptome	741	Y
F001357	Metagenome / Metatranscriptome	716	Y
F001418	Metagenome / Metatranscriptome	698	Y
F001633	Metagenome / Metatranscriptome	660	Y
F003383	Metagenome / Metatranscriptome	490	Y
F003787	Metagenome / Metatranscriptome	468	Y
F003877	Metagenome / Metatranscriptome	464	Y
F015340	Metagenome / Metatranscriptome	255	Y
F015698	Metagenome / Metatranscriptome	252	Y
F020134	Metagenome / Metatranscriptome	225	Y
F020912	Metagenome / Metatranscriptome	221	Y
F022474	Metagenome / Metatranscriptome	214	Y
F024050	Metagenome / Metatranscriptome	207	Y
F024792	Metagenome / Metatranscriptome	204	Y
F027762	Metagenome / Metatranscriptome	193	Y
F031389	Metagenome / Metatranscriptome	182	Y
F035144	Metagenome / Metatranscriptome	172	Y
F035644	Metagenome / Metatranscriptome	171	Y
F038248	Metagenome / Metatranscriptome	166	Y
F038498	Metagenome / Metatranscriptome	165	Y
F041624	Metagenome / Metatranscriptome	159	Y
F051291	Metagenome / Metatranscriptome	144	Y
F057922	Metagenome / Metatranscriptome	135	N
F058583	Metagenome / Metatranscriptome	134	N
F062337	Metagenome / Metatranscriptome	130	N
F067292	Metagenome / Metatranscriptome	125	N
F067447	Metagenome / Metatranscriptome	125	N
F068527	Metagenome / Metatranscriptome	124	N
F068528	Metagenome / Metatranscriptome	124	Y
F072941	Metagenome / Metatranscriptome	120	N
F073807	Metagenome / Metatranscriptome	120	N
F076700	Metagenome / Metatranscriptome	117	N
F080954	Metagenome / Metatranscriptome	114	Y
F085271	Metagenome / Metatranscriptome	111	Y
F088061	Metagenome / Metatranscriptome	109	Y
F091395	Metagenome / Metatranscriptome	107	Y
F093040	Metagenome / Metatranscriptome	106	N
F094972	Metagenome / Metatranscriptome	105	Y
F105208	Metagenome / Metatranscriptome	100	N

Family

Scaffold	Taxonomy	Length	IMG/M Link
Ga0005484J37272_100001	Not Available	593	Open in IMG/M
Ga0005484J37272_100011	Not Available	812	Open in IMG/M
Ga0005484J37272_100017	Not Available	638	Open in IMG/M
Ga0005484J37272_100060	Not Available	786	Open in IMG/M
Ga0005484J37272_100160	Not Available	670	Open in IMG/M
Ga0005484J37272_100197	Not Available	539	Open in IMG/M
Ga0005484J37272_100311	Not Available	618	Open in IMG/M
Ga0005484J37272_100387	Not Available	579	Open in IMG/M
Ga0005484J37272_100696	Not Available	522	Open in IMG/M
Ga0005484J37272_100740	Not Available	578	Open in IMG/M
Ga0005484J37272_100785	Not Available	523	Open in IMG/M
Ga0005484J37272_100829	Not Available	767	Open in IMG/M
Ga0005484J37272_100853	Not Available	542	Open in IMG/M
Ga0005484J37272_100888	Not Available	577	Open in IMG/M
Ga0005484J37272_100906	Not Available	585	Open in IMG/M
Ga0005484J37272_100942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Lacunisphaera → Lacunisphaera limnophila	827	Open in IMG/M
Ga0005484J37272_100957	Not Available	810	Open in IMG/M
Ga0005484J37272_101228	Not Available	506	Open in IMG/M
Ga0005484J37272_101344	All Organisms → cellular organisms → Eukaryota	956	Open in IMG/M
Ga0005484J37272_101454	Not Available	756	Open in IMG/M
Ga0005484J37272_101513	Not Available	634	Open in IMG/M
Ga0005484J37272_101651	Not Available	550	Open in IMG/M
Ga0005484J37272_101910	Not Available	790	Open in IMG/M
Ga0005484J37272_102082	Not Available	589	Open in IMG/M
Ga0005484J37272_102139	Not Available	1360	Open in IMG/M
Ga0005484J37272_102140	Not Available	1430	Open in IMG/M
Ga0005484J37272_102355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNR698	584	Open in IMG/M
Ga0005484J37272_102561	All Organisms → Viruses → Predicted Viral	1061	Open in IMG/M
Ga0005484J37272_102633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	749	Open in IMG/M
Ga0005484J37272_103092	Not Available	1343	Open in IMG/M
Ga0005484J37272_103276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex → Burkholderia ambifaria	575	Open in IMG/M
Ga0005484J37272_103417	Not Available	743	Open in IMG/M
Ga0005484J37272_103421	Not Available	589	Open in IMG/M
Ga0005484J37272_103616	Not Available	633	Open in IMG/M
Ga0005484J37272_103982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
Ga0005484J37272_104069	Not Available	555	Open in IMG/M
Ga0005484J37272_104117	Not Available	634	Open in IMG/M
Ga0005484J37272_104174	Not Available	579	Open in IMG/M
Ga0005484J37272_104490	Not Available	647	Open in IMG/M
Ga0005484J37272_105160	Not Available	607	Open in IMG/M
Ga0005484J37272_106359	Not Available	592	Open in IMG/M
Ga0005484J37272_108112	Not Available	705	Open in IMG/M

Sequences

Scaffold ID	Protein ID	Family	Sequence
Ga0005484J37272_100001	Ga0005484J37272_1000011	F057922	VPSDPANSPFSDWHAQSEHSTQGSGDVVLLLPVAAFIRPRISAPEPICLFYLLEARVSKQTFARPHRLLPFESHRSEVNAPALSLRRNSELFFQSVRP*TPILACALTPSGYVRCPKPVTVFQAQSSQTSIQLPLPFRTFILPDRSAQSVARSEKLAFVSGPFSLRSPQASIIFNNYPLTDHRSRFATVYQAYCSLN
Ga0005484J37272_100011	Ga0005484J37272_1000111	F068527	QVVQPAVASLGYPSGEPAAFAAAPSSGCAGTVLSACAYLPALRLDRRPTSPARIGVASLSSTGGKHPAFTVCYALPADWLPTFQLALVSRLQLGLRLLPTHIWRRPLARLARTTFGLHRLLLQLPACAFCCCRLPACARLPPPFAKPVVILRLASAVSPSGFTGFDSPGLRLALHTSGWAFDAPLASTEPCIAG*
Ga0005484J37272_100017	Ga0005484J37272_1000172	F031389	LTRPRRRIARFTVAAGERKAASRSELLPEMEKADAHRSIDPWPAKTGGGEQRAHVTPSSDAKFRPCMPVGERADRRVTWN
Ga0005484J37272_100060	Ga0005484J37272_1000601	F076700	LAFQSSLAVQPVLRPPATPVAALQLSLVLGSSGCAGTVALTCVSALHSGSTSGQPSGSDRFRVLRLDRLQTSDSHRLFRSSARPLAIHQACARSWFHRACARQSWFHLARAAWPFLRLGRQPTSDSHRCRPLARLAASSGLRLMLPLPLVWLRVQFAPVASPYAFTGREPLGLRLVAPSPAEPLMHSLFPPNLASPAKPSMSIPLPLALASSGIFQLNIFRLASAFALLVRPAIPLWLAPQVSPSVRAGGHPPGSHRLS
Ga0005484J37272_100160	Ga0005484J37272_1001601	F024050	SCSACDVGRGSPLVLHLRLYRRSIIESPRCSHHSAVPTGRSSGFPKSQPFGIADDSPSELPQTLNPPAPIDGYPSYLGSHTIRFALVESPGCPGHSPLATAIDQFPGCPKSWVSHRSPIPRASSFPEPWFLG*
Ga0005484J37272_100197	Ga0005484J37272_1001971	F003383	FLLSRRPNPQVAPWLRSFGCAGDGPFELPRASHAFGGAGFGRVPSFPGGSHFLRSAPDVGLGFPLILHLRLYRRSIIESPRFSHPSAVPSCRSSSCLESQPFGIADDSSPKLP*TSNPPAPTDRYPSYLGSRTTRFALAGFPSCPGHLPLATAIDQFPGCPKSRVSHRSPIHRLSSRPE
Ga0005484J37272_100202	Ga0005484J37272_1002021	F062337	PTSGSTAGQPSGSDRCCLAWLGQWQVLSFRCVLRAADRLAADLPTCVGVRPPARPAITTDSHLALSFSSAGLSASGSHRLPLQQLACAGCCCNPQLALAVATFCHTGGVLPTRIGCSALRLYRFRITRLAPCASTSGWAFDAPLTSTEPCIAGKPSMSIPYPPVRASSGSASLTTFDLRRLLQSLAQPAIPLRLSPQVSPSGWADGDLPTLIGFSFHQPFRQPTPDA
Ga0005484J37272_100311	Ga0005484J37272_1003111	F003787	SK*SDFQPCSPPACTVLNIAIGSAGRLASLLPDNRFPRSPDQCFKTRRSLLSRSGPDARNGLSLARNGCSFRSLHSRFNVPGLPLRFQLAASSARSAFRLRYPVRLAPVWAASLLLARCSFRDLLEDRASSLHSPLGLLPPSGSKRSAGFAVFRPAFRLRPISLRSPPPVSICQVLSLVPITSVSAADHRSRSATSSEACCSSNL
Ga0005484J37272_100387	Ga0005484J37272_1003871	F000396	ISQPNSPPACNGTELCPQDRRVSSLQLPAAFFRTLRINAYGLTCQLSWLEPVSRSGLSLSRNDCPSPGHHFEVEAPDLLLQHPAVRSSCPFRFRFPYVLQFALVRARSIPKPRCLTPVRHSQPFFGSPLPFGAFRALKDQSVQPDSRLGSSPSERSRLPITPRHRIHFLVGLDTGSPLQAR*
Ga0005484J37272_100696	Ga0005484J37272_1006961	F024792	VTGEWLSQAGWLNPSESVSQGAEVGGRIHQFLWRRSRAVSDAKQELSG*
Ga0005484J37272_100696	Ga0005484J37272_1006962	F020912	VNQHGAGDSGGLDIKASPRKDAERRDKVSVRNGKETQPGQGM*
Ga0005484J37272_100740	Ga0005484J37272_1007401	F038498	AQGSRYD*ANHRHARRSIRGEFVFESSGLPLAVAVFQPAPGQCRNLVKLKSLRRNWKFETAFRSLATTFAHHCEVNVPDLPLHFHTENPAEPVRSRTPPLRSVFEAEPGRILRPLPVALRQFPALLRFHSISTPLEAYLQSPPDQSVQPSSSRGSLPDETLACPLLPSARSFRILPRITAFGAPYSARLIVP
Ga0005484J37272_100785	Ga0005484J37272_1007851	F067447	FLLDTYTKRYTRIAPWLTLSACAGRGLLRAQHFSALPRSRIAPRSTLGFQRQARIAPYPALPALMLHPDCSVFSTCRSVPCTDCSALVPSRSAPATNYFVFDTWPFRPAPGCLRALDVLPCAVYRSLGVQHLALAPVTNYFVLDTWPSVQRPDASVLSTSRPALPADYSALNTL
Ga0005484J37272_100829	Ga0005484J37272_1008291	F080954	QRSDLERTFPATQEDEDSIEAGDSLCGASRGIEDSREIGTPVPGATGDAKFSGMWSFVAG
Ga0005484J37272_100853	Ga0005484J37272_1008531	F058583	MLGVRSAANLSLNLRIAARRRCFSTCAGSVPRSIVKLKSLRRSWKLETAFHSLATTFAHHCEVNVPDLLLRFRTENPAEPVRSRTPPLRSVFEAEPGRNRRPLPVALRRSPALLRFHSISTPLEAHLQSPPDQSVRPSSSRGSLPDETLACPLLPSARSFRILPRITAFDALCSARLIVP
Ga0005484J37272_100888	Ga0005484J37272_1008881	F038498	AQGSRYDANHRHARRSIRGESLFESPGRCSPPLLFNVRRVNAATCVKLKSFRRSRKLETAFHSPATTFARHYEVNVPDLPLRVRTEDLTKPVRSQTPSLRSVFEAEPGRVLRLLPVALRRSPALLRFHSISTPLKAYLQSPPDQSVQPSSPRGSLSDKTSACPLLPSALFLSDFASDHRSRALFRPTNRS
Ga0005484J37272_100906	Ga0005484J37272_1009061	F027762	RAVSLANGSEPGTMIRERRLLKVISASGERRESGPDARVSFSDQATD*
Ga0005484J37272_100942	Ga0005484J37272_1009421	F020134	MTLSRGAGDLACPTVARQKGRAAPAATFLSPVARDYPSRALGGVFSPPHRDCS
Ga0005484J37272_100957	Ga0005484J37272_1009572	F067292	SVVQPLLRPSAPPAAGPQLSLATASTGCAGFKPPTCVGCSTSGSTGGQPSGSDRCSVLRLDRWQAPGFRRLHCASARPVANLPTCVGVLPPARPATNCRLTPGADSSARLVPNFRLSPVVVAAFSLRLLPLRLLQLALAVARLPYR*
Ga0005484J37272_101228	Ga0005484J37272_1012281	F085271	MESGCGERREIGYFAKVDFWEAKLAKRFDPEGHKNPWRGAEAGGASRSIGLERIQ*
Ga0005484J37272_101344	Ga0005484J37272_1013441	F072941	MQRTLKRELKVLEIVKSEAIESPIMINITVGEIQFISIRLLARVHFGCDEWMAFKGD*
Ga0005484J37272_101454	Ga0005484J37272_1014541	F038248	RLASPINLPACLRPTSDSHRTLRLPASPSDQPPTCAGCRLFGLCLPACLQLAPSTCLRALPSDLPLARAADPSSGSAFQLNSRLSIGYCIFQLRLFEATSDLRRTLRSVALPSGLLPACAFCRPSSFTFRLTVDLRRPSVFQICLPSNFRLSSKSGSQRSFRLTADLRRRSFFRPAFEPISDFRRISHSWTSPSDQPPACAVCQPSKLCLPAYLWLAPPICLPALPSCLPPTCAGCLPSSSAPESTSDFLR
Ga0005484J37272_101513	Ga0005484J37272_1015131	F001418	KRKPQGKMAEAEFTSSSGSVRALSVNAKKGLSDEGRLETAPSRVK*
Ga0005484J37272_101513	Ga0005484J37272_1015133	F015340	VCLPGSQAGDRNRQPKRAKRPHSKFSDRKALDGPAMRPATPLAVENGVGK
Ga0005484J37272_101651	Ga0005484J37272_1016512	F001633	GWVLATYSFPAHTLGALAFAGRVLPDATLRGMRRFRSHGGIAPAVAGWSLLSEASSPGSVAPCQGRRAGRGADTPALRASRRHPYRGDGTGFWPAVGPTLRV*
Ga0005484J37272_101910	Ga0005484J37272_1019101	F035144	VTHKFSRLVLFSACATVISMFTLAAAECTPGTLASYIALGSTGCTVGNDTFFNFQLINDGATGGAVAVDANDITVAGMGPAGTPGASSQNSFLPQDIGVDFDTALWSVAAGQSQDDDIAFDVSVGTGAVDITDAGVDQISNTVPNGTASVTEKGCSGIVFPCTQTWGVDTNDSTFVSDTIFTATGTISVEKDIALVGGTGSAGLSNVADVFSTSEVPEPRALSFLLGLGLVAGFVVRKKFQGANA*
Ga0005484J37272_102082	Ga0005484J37272_1020821	F094972	MSPLPDFVSALLAATVSPLPSRDFYIPLRIAAFDAACHLKAYLLELPDFPSLPAGLPLLTSGRRIIVPGPLLLTRFVCSVN
Ga0005484J37272_102139	Ga0005484J37272_1021391	F035644	VILVKEPSFLSEQELSEYLHSDYLTESEKDAEADIPVPNRLLPRSQYQRLVRSLRLSQRIGLLIWLNRENLLTIGGRERLLYLQSKASFEALEAGLKFAQRLSREKKLISDFQHHMRELNRRPQSKHFRQSEKRRIGVGYRDKGMLPEQSLKARQAAQSESYISSGSMPSRVMELLQRYLPSCLTEDGEWIDLSEFSQDLRVLGELSEVTKLLHPL*
Ga0005484J37272_102140	Ga0005484J37272_1021402	F035644	NRLLPRSQYQRLVRSLRLSQRIGLLIWLNRENLLTIGGRERLLYLQSKASFEALEAGLKFAQRLSREKKLISDFQHHMRELNRRPQSKHFRQSEKRRIGVGYRDKGMLPEQSLKARQAAQSESYISSGSMPSRVMELLQRYLPSCLTEDGEWIDLSEFSQDLRVLGELSEVTKLLHPL*
Ga0005484J37272_102324	Ga0005484J37272_1023242	F000203	GVGDRQALFPMLALGATLAASFPTLFSTASGVFGLVAGPSSALRPPDY*
Ga0005484J37272_102355	Ga0005484J37272_1023551	F015698	VFGSAVRLCLSAPLVAFSSPPPDSTLPGAPQSLSQTGPVARNGLSLPSNGLRFRGFHSRIDVPGLLLHNPHGRSQARSAFCSTAGYSSPRIRPSPRFCPSPARFRARSASVPASTPLWDCYVPPDQSVLPVSLPISPPSSCARFPLAPRFLLLLLVGGNGSMFLVRYASGGLLFL
Ga0005484J37272_102561	Ga0005484J37272_1025612	F105208	MQQPESGVWFVRQGRKVDWQRKLWVGWKAAPKGSADDENRRLGSKAEPEG*
Ga0005484J37272_102633	Ga0005484J37272_1026331	F073807	MILAVGALGLAALPAAADTPCATAALSSYLVSGFTCSVGDLDFSDFSFNTGGTDPVTAAGVGVTPVTSPDGPGLDFDPSGFVSGDGLSQDVMVGFTVTAAPGVLIDDIYMGFGNVTTSGTGTALYTENFCGGPEDACSLFVEAPTTSDTNAVNLKSTDIGGPVSSLNITKDLTLQTGTDGLAATSSFLNEYSTVPEPRAVSLVLGLGLLAGFVFFKRRQVAQS*
Ga0005484J37272_103092	Ga0005484J37272_1030921	F035644	MSTPETPEERALSEYVHSDYMTESERDAEADIPVPDRLLPLRSYRKLVEALRLSQKIGLLIWLNRQGLLSLGGKERLLYLQSKASFEALEAGLRFARRLSEEKKLQSDFMHQMRELNRRPQSKHFRQSEKRRIGVGYRDKGMLPEQSLRARRAAWEESFLPTELIPEKLIQVLKQYLPSCLTEDGEWVDLSIFPGTFGSEVESEMKTLLHPL*
Ga0005484J37272_103276	Ga0005484J37272_1032761	F001357	MKRMLLTALIALALPMMAFAGSSYDFTNSGGTLTGTSAGLTLTGSELIALNGPGLGLVVGNLGTVTFSTGALTGGNLQMGATFGSGGSFNITGNGTNGVPNGVIFNGSFSGPVTWTLVTLANGTHNYTLTGTIEGTWYNGSNVQGATVQLTINTGKGFFNGSTTISSGDTN
Ga0005484J37272_103417	Ga0005484J37272_1034171	F093040	MFTTAMRLAEAEGVKHALGVHHPKTGTGRKGPGLPTNPDLSPVTRDYPRRSRVDGHPLARPPLHSTFR
Ga0005484J37272_103421	Ga0005484J37272_1034211	F091395	FQVTFPALFIAGMHGTEHRILKRRTPRRSAPQDLFFPSPGSTLCRSPQPFLLFRTGPRLVATFRSPRTAPAFRGLHSRIDVPGLLLRPLVCRFRCPFGFPAPPPALVCPRTGSFPAKPVAASATDSPNC*PSLHSPSGLLHPSGSKRSADLAARWPAFRTRPISVRSPPPAAILLGWAADHRSRSATLPEACCS
Ga0005484J37272_103616	Ga0005484J37272_1036161	F041624	LKKSLLVLTLVVLGCSFALAQAPGSYAFWSSAGTEEYCNYNVIVGNSGGVVNGYDNTTALCDYEFNSPIVGFSATTPSDGLPVHGKGAVVGDGIYDDGADGYTGDQWTVFQSSKVSKMKKGFFTGAWCWIGVAGAYTGTYFGDNYGYCTAGAPVKGPAIAGHTTSGSGHGLLRK*
Ga0005484J37272_103982	Ga0005484J37272_1039821	F003877	PVHTAIRNCTRDEGRPFGFGDQVADPKPPQAAVVKSDGGERCGNVGTMIPAGKVERGERKQTASEASKAD*
Ga0005484J37272_104069	Ga0005484J37272_1040691	F068528	PSTMRTTDFCFSLPDYEYPCFVSYRHLFEAYASPLADGLASMTRRPVDLAFHDAESASVGFFRLARGMILPALPWEPYL*
Ga0005484J37272_104117	Ga0005484J37272_1041171	F041624	LKLKSLMVITLVVLGCSFAAAQAPGTYSFWDAAGTLEYCNYNVITTNSGGVVAGYDAFTNCGGAYNSAVVGYSATTPADGLPAHGKGAVVGDSIYDASCECFSGEQWTVWQSAKTSKLKKGVFSGAYGWIGVAGSYTGTYFGDNYGYLGAGYPQREAVAGHGSSAGTSRNLIRK*
Ga0005484J37272_104174	Ga0005484J37272_1041741	F001233	LRWAVTVNRPAPKISRIIPGDWGKDESGWLVHPLINRAVRSGSGGRIHQFLWRRSRAVSNAKRNCAVRND*
Ga0005484J37272_104490	Ga0005484J37272_1044901	F088061	MKKLGVLLALTLAVVLLAGNALAQNVGDKSVYFVTYYSNANTAGAPQGVLRLINDGDASTAQIEGRPNGNLWASIYVFDDSQEMLECCNCFISADGLLSEWVNRELTANTVTGRVPTRGVIKIISSSTDDPTNNRLTAGIHGTQTHVQVTNPWTLTEAPLSDANLVSAEQQGLQQSCSFAITLGSGQGTCSCTPEDQDF*
Ga0005484J37272_105160	Ga0005484J37272_1051601	F051291	MNSKQRVLSNRDVFPPAVSWRARRATEPSRAPVVLIVDEDLGFVWWLGQMFSEAGCQVVPALNPEQTDSFAQNLNVDVIVVNPELAGVPELIRGMSSPRPPKIVAIRNHNSGVRSGVRADATLERPSGWGNVSQNEWLGCVRRLVRDVQATRVAYPQCS*
Ga0005484J37272_106359	Ga0005484J37272_1063591	F088061	MKKLGVLLFLALAVMMLGGNALAQNVGDNSVYFVTYYSNANYEGAPSAVLRIVNDGDASTSQSEGRPNGNLWASIYIFDDSQEMQECCNCYISADGLLSEWVNGELLGNPLTGKVNHRGVIKVISSTNPDPTNNKLKAGLRGWATHIQAASPYAVTETPLADSNLVSAEQTALQESCSFA
Ga0005484J37272_108112	Ga0005484J37272_1081121	F022474	KTTLLAAALVVTLTLSAAAGTTKKPAPSQHLAGSTVQKQGTISVPPALCDPCLFYSGDLDPASLNAAGMSDENTLLILGGSSTYASFTLTGISATVTGILFNVQADANFDPQTASYDVRTGVSEGDGGTSIANGTAAIQVAPTGRNFIGLNEFSVAVNLSTPLVLSPGQYWFNITPNCTNGTQDGSCSVGRIFFSNTTNRANGVNGEAQTEGQLYLNSGFFGFTWANWCDSSLG

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

3300002652: Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF133 (Metagenome Metatranscriptome, Counting Only)

Overview

Ecosystem and Geography

Associated Families

Associated Scaffolds

Sequences