Metagenome Family F094833

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F094833
Family Type	Metagenome
Number of Sequences	105
Average Sequence Length	73 residues
Representative Sequence	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQ
Number of Associated Samples	78
Number of Associated Scaffolds	105

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.63 %
% of genes near scaffold ends (potentially truncated)	41.90 %
% of genes from short scaffolds (< 2000 bps)	87.62 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.524 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (17.143 % of family members)
Environment Ontology (ENVO)	Unclassified (18.095 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (41.905 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.10% β-sheet: 0.00% Coil/Unstructured: 16.90%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 105 Family Scaffolds
PF01609	DDE_Tnp_1	11.43
PF05378	Hydant_A_N	1.90
PF03328	HpcH_HpaI	1.90
PF13546	DDE_5	1.90
PF03972	MmgE_PrpD	1.90
PF02882	THF_DHG_CYH_C	0.95
PF01425	Amidase	0.95
PF00920	ILVD_EDD	0.95
PF13193	AMP-binding_C	0.95
PF12710	HAD	0.95
PF01314	AFOR_C	0.95
PF00724	Oxidored_FMN	0.95
PF05973	Gp49	0.95
PF13683	rve_3	0.95
PF03848	TehB	0.95
PF00313	CSD	0.95
PF01909	NTP_transf_2	0.95
PF02371	Transposase_20	0.95
PF02592	Vut_1	0.95
PF00665	rve	0.95
PF13298	LigD_N	0.95
PF14076	DUF4258	0.95
PF00294	PfkB	0.95

COG ID	Name	Functional Category	% Frequency in 105 Family Scaffolds
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	11.43
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	11.43
COG5421	Transposase	Mobilome: prophages, transposons [X]	11.43
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	11.43
COG3293	Transposase	Mobilome: prophages, transposons [X]	11.43
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	11.43
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	3.81
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.90
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	1.90
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	1.90
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	1.90
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.90
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	0.95
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.95
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.95
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	0.95
COG1738	Queuosine precursor transporter YhhQ, DUF165 family	Translation, ribosomal structure and biogenesis [J]	0.95
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.95
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.95
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.95
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.95
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.95
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.95
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	0.95
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.95
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.95

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.52 %
Unclassified	root	N/A	10.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.52 %
Unclassified	root	N/A	10.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.52 %
Unclassified	root	N/A	10.48 %

Name	Rank	Taxonomy	Distribution
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	73.33 %
Unclassified	root	N/A	10.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.86 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.95 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	73.33 %
Unclassified	root	N/A	10.48 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.86 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.95 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	73.33 %
Unclassified	root	N/A	10.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.86 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.95 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	73.33 %
Unclassified	root	N/A	10.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.86 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.95 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	73.33 %
Unclassified	root	N/A	10.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.86 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.95 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	73.33 %
Unclassified	root	N/A	10.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.86 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.95 %

Name	Rank	Taxonomy	Distribution
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	73.33 %
Unclassified	root	N/A	10.48 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.86 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.95 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003852\|Ga0031655_10090964	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1242	Open in IMG/M
3300003859\|Ga0031653_10150574	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	608	Open in IMG/M
3300003861\|Ga0031654_10014797	All Organisms → cellular organisms → Bacteria	2277	Open in IMG/M
3300004481\|Ga0069718_10008532	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1145	Open in IMG/M
3300004778\|Ga0062383_10302970	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	767	Open in IMG/M
3300005833\|Ga0074472_10309498	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	747	Open in IMG/M
3300009053\|Ga0105095_10551830	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	640	Open in IMG/M
3300009091\|Ga0102851_10344687	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1477	Open in IMG/M
3300009111\|Ga0115026_10278738	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1160	Open in IMG/M
3300009131\|Ga0115027_10049922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2141	Open in IMG/M
3300009166\|Ga0105100_10872929	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	560	Open in IMG/M
3300009167\|Ga0113563_10372402	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1513	Open in IMG/M
3300009167\|Ga0113563_10459256	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1377	Open in IMG/M
3300009167\|Ga0113563_13285752	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300009179\|Ga0115028_10090754	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1700	Open in IMG/M
3300010996\|Ga0139308_101562	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2064	Open in IMG/M
3300012931\|Ga0153915_10200827	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2187	Open in IMG/M
3300012931\|Ga0153915_10288595	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1829	Open in IMG/M
3300012931\|Ga0153915_10331809	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1706	Open in IMG/M
3300012931\|Ga0153915_10544486	Not Available	1330	Open in IMG/M
3300012931\|Ga0153915_10563868	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1307	Open in IMG/M
3300012931\|Ga0153915_11235160	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300012931\|Ga0153915_11490351	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	791	Open in IMG/M
3300012931\|Ga0153915_11926859	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	691	Open in IMG/M
3300012931\|Ga0153915_13559661	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	504	Open in IMG/M
3300012931\|Ga0153915_13585702	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	502	Open in IMG/M
3300012964\|Ga0153916_10002181	All Organisms → cellular organisms → Bacteria	14407	Open in IMG/M
3300012964\|Ga0153916_10257975	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1763	Open in IMG/M
3300012964\|Ga0153916_10457304	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1343	Open in IMG/M
3300012964\|Ga0153916_10521426	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1260	Open in IMG/M
3300012964\|Ga0153916_10716403	Not Available	1080	Open in IMG/M
3300012964\|Ga0153916_11481674	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300012964\|Ga0153916_11861569	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	673	Open in IMG/M
3300013090\|Ga0163209_1029766	All Organisms → cellular organisms → Bacteria	1918	Open in IMG/M
3300014324\|Ga0075352_1275474	Not Available	527	Open in IMG/M
3300017944\|Ga0187786_10225683	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	727	Open in IMG/M
3300017966\|Ga0187776_10227532	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1184	Open in IMG/M
3300017966\|Ga0187776_10412010	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	906	Open in IMG/M
3300017966\|Ga0187776_10435253	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	884	Open in IMG/M
3300017966\|Ga0187776_10437147	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	883	Open in IMG/M
3300017999\|Ga0187767_10072979	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	901	Open in IMG/M
3300018032\|Ga0187788_10029838	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300018055\|Ga0184616_10166491	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	820	Open in IMG/M
3300018058\|Ga0187766_10059870	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2253	Open in IMG/M
3300018064\|Ga0187773_10100311	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1426	Open in IMG/M
3300018088\|Ga0187771_10149710	Not Available	1917	Open in IMG/M
3300018089\|Ga0187774_10030909	All Organisms → cellular organisms → Bacteria	2218	Open in IMG/M
3300018089\|Ga0187774_10198148	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1097	Open in IMG/M
3300018090\|Ga0187770_11722395	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	512	Open in IMG/M
3300020150\|Ga0187768_1036153	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1083	Open in IMG/M
3300022309\|Ga0224510_10892834	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	500	Open in IMG/M
3300024056\|Ga0124853_1266628	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2450	Open in IMG/M
3300025807\|Ga0208828_1079244	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300025950\|Ga0210134_1031549	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	735	Open in IMG/M
3300026485\|Ga0256805_1004433	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1316	Open in IMG/M
3300026898\|Ga0207788_1008005	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	995	Open in IMG/M
3300027715\|Ga0208665_10152759	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	723	Open in IMG/M
3300027843\|Ga0209798_10313558	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	749	Open in IMG/M
3300027900\|Ga0209253_11107045	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	538	Open in IMG/M
3300031862\|Ga0315280_10014403	All Organisms → cellular organisms → Bacteria	9230	Open in IMG/M
3300031952\|Ga0315294_11095161	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	656	Open in IMG/M
3300032020\|Ga0315296_10123719	Not Available	1621	Open in IMG/M
3300032069\|Ga0315282_10142480	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300032118\|Ga0315277_10220479	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300032163\|Ga0315281_10302068	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1747	Open in IMG/M
3300032173\|Ga0315268_11681494	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	647	Open in IMG/M
3300032770\|Ga0335085_10731814	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1096	Open in IMG/M
3300032770\|Ga0335085_11270966	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	778	Open in IMG/M
3300032829\|Ga0335070_10374843	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1366	Open in IMG/M
3300032829\|Ga0335070_11630408	Not Available	586	Open in IMG/M
3300033004\|Ga0335084_10674699	Not Available	1054	Open in IMG/M
3300033406\|Ga0316604_10675938	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	567	Open in IMG/M
3300033408\|Ga0316605_10421183	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1210	Open in IMG/M
3300033413\|Ga0316603_10429188	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1200	Open in IMG/M
3300033416\|Ga0316622_100944456	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1005	Open in IMG/M
3300033433\|Ga0326726_10227820	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1728	Open in IMG/M
3300033480\|Ga0316620_10919246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	847	Open in IMG/M
3300033480\|Ga0316620_12351098	Not Available	530	Open in IMG/M
3300033481\|Ga0316600_11293044	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300033482\|Ga0316627_100161175	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1667	Open in IMG/M
3300033488\|Ga0316621_10433708	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	903	Open in IMG/M
3300033493\|Ga0316631_10038882	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1484	Open in IMG/M
3300033493\|Ga0316631_10253169	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	693	Open in IMG/M
3300033513\|Ga0316628_100659049	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1369	Open in IMG/M
3300033521\|Ga0316616_101707705	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	824	Open in IMG/M
3300034078\|Ga0373900_092242	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	583	Open in IMG/M
3300034079\|Ga0373904_093361	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	627	Open in IMG/M
3300034080\|Ga0373897_045652	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	818	Open in IMG/M
3300034081\|Ga0373911_049308	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	728	Open in IMG/M
3300034084\|Ga0373903_066349	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	824	Open in IMG/M
3300034085\|Ga0373908_022510	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1131	Open in IMG/M
3300034088\|Ga0373912_0177897	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	580	Open in IMG/M
3300034089\|Ga0373913_0076353	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	886	Open in IMG/M
3300034089\|Ga0373913_0153549	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	652	Open in IMG/M
3300034090\|Ga0326723_0057142	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1656	Open in IMG/M
3300034099\|Ga0373902_014414	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1410	Open in IMG/M
3300034162\|Ga0373915_018899	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	524	Open in IMG/M
3300034191\|Ga0373909_0195036	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	638	Open in IMG/M
3300034414\|Ga0373905_009065	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1273	Open in IMG/M
3300034419\|Ga0373914_0043988	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1047	Open in IMG/M
3300034815\|Ga0373906_149027	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	560	Open in IMG/M
3300034894\|Ga0373916_0005497	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1363	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.76%
Engineered	Engineered	15.24%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	48.57%
Terrestrial	Environmental → Terrestrial	36.19%
Bioremediation	Engineered → Bioremediation	15.24%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	44.76%
Soil	Environmental → Terrestrial → Soil	33.33%
Metal	Engineered → Bioremediation → Metal	15.24%
Marine	Environmental → Aquatic → Marine	1.90%
Sediment	Environmental → Aquatic → Sediment	1.90%
Peat	Environmental → Terrestrial → Peat	1.90%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.95%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	32.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.71%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	15.24%
Lake	Environmental → Aquatic → Freshwater → Lake	8.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.71%
Lentic	Environmental → Aquatic → Freshwater → Lentic	4.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.90%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.95%
Sediment	Environmental → Aquatic → Marine → Sediment	0.95%
Loam	Environmental → Terrestrial → Soil → Loam	0.95%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	32.38%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	23.81%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	15.24%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	6.67%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.71%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	4.76%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.90%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.95%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.95%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.14%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	16.19%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	15.24%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	14.29%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	6.67%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	5.71%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.81%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	2.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.90%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	1.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.90%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.95%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.95%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.95%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.95%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.95%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.95%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300010996	ELM11109_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013090	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_160m	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020150	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MG	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025807	Freshwater microbial communities from Lake Kivu, Western Province, Rwanda to study Microbial Dark Matter (Phase II) - Kivu_160m (SPAdes)	Environmental	Open in IMG/M
3300025950	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026485	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 F6	Environmental	Open in IMG/M
3300026898	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 79 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034078	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.1	Engineered	Open in IMG/M
3300034079	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A4.2	Engineered	Open in IMG/M
3300034080	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.1	Engineered	Open in IMG/M
3300034081	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.3	Engineered	Open in IMG/M
3300034084	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A4.1	Engineered	Open in IMG/M
3300034085	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B3A4.3	Engineered	Open in IMG/M
3300034088	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.1	Engineered	Open in IMG/M
3300034089	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.2	Engineered	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034099	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3	Engineered	Open in IMG/M
3300034162	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.1	Engineered	Open in IMG/M
3300034191	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.1	Engineered	Open in IMG/M
3300034414	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A4.3	Engineered	Open in IMG/M
3300034419	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B5A4.3	Engineered	Open in IMG/M
3300034815	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B3A4.1	Engineered	Open in IMG/M
3300034894	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.2	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0052254_10063572	3300003152	Sediment	MKEENILNEGLEKASEKKDNMNWISCLAFGNPIGCPPCLANLKLAGFLAYYRMTAFFMEPSKSARVQ
Ga0031655_100909642	3300003852	Freshwater Lake Sediment	MKLMTKEEKILKEGLEKVSEKKDNMDGISSLAFFNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQ
Ga0031653_101505742	3300003859	Freshwater Lake Sediment	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQS
Ga0031654_100147971	3300003861	Freshwater Lake Sediment	GLEKVSEKKDNMDGISSLAFFNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQSVT*
Ga0069718_100085321	3300004481	Sediment	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLACLNSMGCSPFWAKVKLALSLAYYRITAFFYLYQKVQDFSY*
Ga0062383_103029701	3300004778	Wetland Sediment	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRTTAFLIPIPKSARLQLITQ*
Ga0074472_103094981	3300005833	Sediment (Intertidal)	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLACLNSMGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQLLTLPSQFSKFLTI
Ga0105095_105518302	3300009053	Freshwater Sediment	MTKEEKILNDGLEKVPEKKDNTNWISSLAFFNSIGCSPFWAKVKLALSLAYYRITAFFIPISKSARLQSISHSK*
Ga0102851_103446871	3300009091	Freshwater Wetlands	MKLMTKEEKILKEGLEKVPEKKDNMDWISSLAFLNSIGCSPFLAKVKFALSLAYYRTTAFLIPISKSARLKLLSYSVL*
Ga0115026_102787382	3300009111	Wetland	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQ*
Ga0115027_100499222	3300009131	Wetland	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQLINHLITIYLVT*
Ga0105100_108729291	3300009166	Freshwater Sediment	MEEVWASLPDWMKLMIKEEKILNDGLEKVSEKEDNMDWISSLAFFNSIGCSPFWAKVKLALSLAYYRITDFLIPISKSARLQLFSQELQPS*
Ga0113563_103724023	3300009167	Freshwater Wetlands	MKLMTKEEKILKEGLEKVPEKKDNMDWISSLAFLNSIGCSPFLAKVKFALSLAYYRTTAFLIPISKSARLKSITE*
Ga0113563_104592562	3300009167	Freshwater Wetlands	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQSIT*
Ga0113563_132857522	3300009167	Freshwater Wetlands	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSARLQLMTQ*
Ga0113563_138680202	3300009167	Freshwater Wetlands	EGLENPSEKKDNMNWISCLAYRRPIGCLASLANLKLGSLLAYYRVTAFFMEPLKSTRVQKLSWATIL*
Ga0115028_100907543	3300009179	Wetland	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSARLQLIRLS*
Ga0139308_1015621	3300010996	Sediment	MTKEEKILNDGLEKVPEKKDNMDWRSSLAFFNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQLMT*
Ga0153915_102008271	3300012931	Freshwater Wetlands	MKLMIKAEKILNDGLEKVSEKKDNMNWISSLACFNSIGCSPFWAKVKLSLSLAYYRITAFFIPISKSARL
Ga0153915_102885951	3300012931	Freshwater Wetlands	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRITAFFISISKSAKL*
Ga0153915_103318093	3300012931	Freshwater Wetlands	MKLMTKEEKILNDGLEKVSEKKDNMNWISSFAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSAR
Ga0153915_105444862	3300012931	Freshwater Wetlands	MKLMTKEEKILNDGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQS
Ga0153915_105638681	3300012931	Freshwater Wetlands	MKLMTKEEKILNDGLEKISEKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSARLQ
Ga0153915_112351602	3300012931	Freshwater Wetlands	MKPMMKDEKGLNEGLENNSEKQDNRIWISCLAFLILTGCFPVGAKVKLTLSLVYLRVTAFLIGISKSARLQ*
Ga0153915_114903512	3300012931	Freshwater Wetlands	MKLMTKEEKILKEGLEKVSEKKDNMDWISSLAFLDSIGCSPFWAKVKFALSLAYYRITAFLIPISKSARLQSMTQKEGGRK*
Ga0153915_119268591	3300012931	Freshwater Wetlands	MTKEEKILNDGLEKVSEKKDNMDWISSLAFFNSIGCSPFWAKVKLALSLAYYRITAFLI
Ga0153915_135596611	3300012931	Freshwater Wetlands	MTKEENILNDGLEKVPEKKDNMNWISSLAFFNSIGCSPFWAKVKSALSLAYYRTTAFFIPISKSARLQSITC*
Ga0153915_135857021	3300012931	Freshwater Wetlands	MEEVWASLPDWMKPMIKEEKILNDGLEKVSEKKDNMDWISSLAFFNSIGCSPFWAKVKLALSLAYYRITAFL
Ga0153916_1000218116	3300012964	Freshwater Wetlands	MKLMTKEEKILNDGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQSLT*
Ga0153916_102579753	3300012964	Freshwater Wetlands	MKDEKILNEGLENISEKQDNRVWISCLACSILIGCSPFWAKVKLALSLAYYRITAFFIPISKSAKLQLLSDLKYI*
Ga0153916_104573042	3300012964	Freshwater Wetlands	MKLMIKAEKILNDGLEKVSEKKDNMNWISSLACFNSIGCSPFWAKVKLSLSLAYYRITAFFIPISKSARLQL
Ga0153916_105214263	3300012964	Freshwater Wetlands	MEEVWTSFPNWMKPMMKDEKRLNEGLENASEKQDNRDWISCLAFLILTGCSPFWAKVKLALSLAYYRITAFL
Ga0153916_107164033	3300012964	Freshwater Wetlands	MKLMTKEEKILKEGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKFALSLAYYRITAFLIPISKSARLQ*
Ga0153916_114816742	3300012964	Freshwater Wetlands	MKPMMKDEKGLNDRLNEGLENNSEKQDNKIWISCLPFLILTGCFPVGAKVKLTLSLVYLRVTAFLIGISKSARLQ*
Ga0153916_118615692	3300012964	Freshwater Wetlands	MKLMTKEEKILNDGLEKVSEKKDNMNWISSFAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQSVILWIISRNLYTTIEIYS*
Ga0163209_10297662	3300013090	Freshwater	MEEVWVSFPNWMKPMMKDENRLNEGLENASEKQDNRAWISCLAFLRLIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQLFSQNGGFL*
Ga0075352_12754742	3300014324	Natural And Restored Wetlands	MKLMTKEEKILKEGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSARLQLITLN*
Ga0187786_102256831	3300017944	Tropical Peatland	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLACSNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQLVRHLLSRPDLLFTSSFWS
Ga0187776_102275322	3300017966	Tropical Peatland	MMKDEKILNEGLENISEKQDNRTWISCLACSILIGCSPFWAKVKLALSLAYYRITAFFIPISKSAKLQ
Ga0187776_104120102	3300017966	Tropical Peatland	MKLMTKEEKILNDGLEKVSEKKDNTDWISSLACLHSIGCSPFWAKVKSALSLAYHRITAFFIPISKSARL
Ga0187776_104352531	3300017966	Tropical Peatland	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSAR
Ga0187776_104371472	3300017966	Tropical Peatland	LKEGLEKVSEKKDNMHWTSSLAFLDSIGCSPFWAKVKLALSLAYYRITAFLIP
Ga0187780_101014091	3300017973	Tropical Peatland	MKEENILNEGLEKASEKKDNMSRISCFAFGNPMGCPPCLANLNLPVLLAYYRMTASFMEPSKKVQEFSY
Ga0187767_100729791	3300017999	Tropical Peatland	MKLMTKEEKILNEGLEKVSEKKDNMNWIPSLAFLNSIGCSPFWAKVKLALSLAYYRTTAF
Ga0187788_100298382	3300018032	Tropical Peatland	MEEVWASLPAWMKLMTKEEKILNDGLEKASEKKDNMNWISSLAFLNSIGCSPFWAKVKFALSLAYYRTTAFFIPISKNARL
Ga0184616_101664912	3300018055	Groundwater Sediment	MKLMTKEEKILKEGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSAKLQLLS
Ga0187766_100598703	3300018058	Tropical Peatland	MKLMTKEEKILNEGLEKVSEKKDNMDWISSLACLNSIGCSPFWAKVKLALSLAYYRITAFFIPISKSARL
Ga0187773_101003111	3300018064	Tropical Peatland	LKEGLEKVSEKKDNMHWTSSLAFLDSIGCSPFWAKVKLALSLAYYRITAFLLPKSKSARVQSLIIIRGGW
Ga0187771_101497101	3300018088	Tropical Peatland	MKLMTKEEKILNDGLEKVSEKIDNMNWISSFAFLNSIGCSPFWAKVKLALSLAYYRTTAFFMPISKSARLQSVT
Ga0187774_100309093	3300018089	Tropical Peatland	MEEVWASLPACMKLMIKEEKILNDGLEKVSEKKDNMNWISSFAFLNSIGCSPFWAKVKLALSLAYYRITAFFIPISKSARL
Ga0187774_101981481	3300018089	Tropical Peatland	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSAKL
Ga0187770_117223952	3300018090	Tropical Peatland	MKPKIKEEKILNDGLEKVSEKKDNMNWISSLAFFDSIGCSPFWAKVKLPLSLAYYRITAFLIPISKSAKLQSLSY
Ga0187768_10361532	3300020150	Tropical Peatland	MTKEEKILNEGLEKVSEKKDNMDWISSLACLNSIGCSPFWAKVKLALSLAYYRITAFFIPISKSARL
Ga0224510_108928341	3300022309	Sediment	MKLMTKEEKILNDGLEKASEKKDNMNWISSLACLNSIGCSPFWAKVKLVLSLAYYRITAFLIPISKSARVQSLSYLMT
Ga0124853_12666284	3300024056	Freshwater Wetlands	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQY
Ga0208828_10792442	3300025807	Freshwater	MEEVWVSFPNWMKPMMKDENRLNEGLENASEKQDNRAWISCLAFLRLIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQLFSQNGGFL
Ga0210134_10315491	3300025950	Natural And Restored Wetlands	MKLMTKEEKILKEGLEKVSEKKDNMDWISSLAFLNSMGCSPFWAKVKLALSLAYYRTTAFFIPISKSARLQSL
Ga0256805_10044331	3300026485	Sediment	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKS
Ga0207788_10080051	3300026898	Tropical Forest Soil	MKLMIKEEKILNEGLEKISVKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRTT
Ga0208665_101527592	3300027715	Deep Subsurface	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQSISHSSFSDLMTQ
Ga0209798_103135582	3300027843	Wetland Sediment	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQSISHLVIE
Ga0209253_111070451	3300027900	Freshwater Lake Sediment	MEEVWTSSPNWIKPVTKDEKKQNRGLENNSEKQDNRIWISCLAFLILIGCFPVWAKVKLTLSLAYHRPTAFLIIISKSAKLQ
Ga0315280_100144033	3300031862	Sediment	MKLMTKEEKILKEGLEKVSEKKDNMDGISSLAFFNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQLMTKKEGGEK
Ga0315294_110951612	3300031952	Sediment	MKLMTKEEKILKEGLEKVSEKKDNMDGISSLAFFNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSAKL
Ga0315296_101237193	3300032020	Sediment	MTKEEKILNDGLEKVSEKKDNMDWISSLAFFNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQSLSR
Ga0315282_101424801	3300032069	Sediment	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARL
Ga0315277_102204791	3300032118	Sediment	MEEVWTSFPNWMKPMMKDEKRLNEGLENASEKQDNKDWISCLAFLILTGCSPFWAKVKWTLSLAYYRITAFFIPILKSAKLQLMT
Ga0315281_103020683	3300032163	Sediment	MEEVWTSFPNWMKPMMKDEKRLNEGLENASEKQDNSNWISCLAFLILTGCSPFWAKVKLALSLAYYRITAFFIPILKSAKLQSLSYSVIGSFNDLMTHDSITVLL
Ga0315268_116814942	3300032173	Sediment	MKLMTKEEKILKEGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSAKLQLMT
Ga0335085_107318142	3300032770	Soil	MKLMTKEEKILKDGLEKVSENKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSARP
Ga0335085_112709662	3300032770	Soil	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKS
Ga0335070_103748431	3300032829	Soil	MKLMIKEEKILNEGLEKVSEKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSAKL
Ga0335070_116304082	3300032829	Soil	EKVSEKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQSLTQ
Ga0335084_106746993	3300033004	Soil	MTKEEKILKDGLEKVSENKDNRNWISSLACLNSIGCSPFWAKVKLALSLAYYRTTAFFIPRSKSARP
Ga0316604_106759382	3300033406	Soil	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQ
Ga0316605_104211831	3300033408	Soil	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSARLQLISHQSLN
Ga0316603_104291882	3300033413	Soil	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQLLNQLLNHNVTQ
Ga0316622_1009444562	3300033416	Soil	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQSISHSLLNDLITQWLNY
Ga0326726_102278202	3300033433	Peat Soil	MKLMTKEEKILKDGLEKVSEKKDNMDWISSLAFFISIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQSLSN
Ga0316620_109192462	3300033480	Soil	KEEKILNDGLEKVSEKKDNMNWISSLACLNSMGCSPFWAKVKLALSLAYYRITAFFIPISKSARL
Ga0316620_123510982	3300033480	Soil	MKLMTKEEKILKEGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQ
Ga0316600_112930441	3300033481	Soil	LEKVSEKKDNMSWISSLACLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSARLQLIS
Ga0316627_1001611751	3300033482	Soil	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQSLSYSVI
Ga0316621_104337081	3300033488	Soil	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQSLSYF
Ga0316631_100388821	3300033493	Soil	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARLQLISYWVIM
Ga0316631_102531692	3300033493	Soil	MKLMTKEEKILKEGLEKVPEKKDNMDWISSLAFLNSIGCSPFWAKVKFALSLAYYRTTAF
Ga0316628_1006590491	3300033513	Soil	MKLMTNEEKILNDGLEKVSEKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRTTAFLIPISKSARL
Ga0316616_1017077051	3300033521	Soil	MKLMTKEEKILKEGLEKVPEKKDNMDWISSLAFLNSIGCSPFLAKVKFALSLAYYRTTAFLIPI
Ga0373900_092242_356_583	3300034078	Sediment Slurry	MKLMTKEEKILKEGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLMPISKSAKLQLITQ
Ga0373904_093361_2_202	3300034079	Sediment Slurry	MKLMTKEEKILKEGLEKVSEKEDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKS
Ga0373897_045652_54_266	3300034080	Sediment Slurry	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSARL
Ga0373911_049308_554_727	3300034081	Sediment Slurry	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTT
Ga0373903_066349_221_433	3300034084	Sediment Slurry	MKLMTKEEKILKEGLEKVSEKEDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRTTAFFIPISKSARL
Ga0373908_022510_2_202	3300034085	Sediment Slurry	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKS
Ga0373912_0177897_1_264	3300034088	Sediment Slurry	IDEVWASLPDWMKLMTKEEKILKEGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQLLSYG
Ga0373913_0076353_83_340	3300034089	Sediment Slurry	MEEVWTSFPNWMKPMMKDEKRLNEGLENASEKQDNRDWISCLAFLILTGCSPFWAKVKLTLSLAYYRITAFFIPILKSAKLQLVT
Ga0373913_0153549_440_652	3300034089	Sediment Slurry	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLACLNSIGCSPFWAKVKLALSLAYYRITAFFIPISKSARLK
Ga0326723_0057142_1159_1374	3300034090	Peat Soil	MKLMIKEEKILNDGLEKVSEKKDNMNWISSLACLNPIGCSPFWAKVKLALSLAYYRTTAFLYLYQKVQDFS
Ga0373902_014414_1003_1218	3300034099	Sediment Slurry	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLYLYQKVQDFS
Ga0373915_018899_338_523	3300034162	Sediment Slurry	MKLMTKEEKILKEGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLM
Ga0373909_0195036_3_170	3300034191	Sediment Slurry	MTKEEKILNDGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRITA
Ga0373905_009065_1_183	3300034414	Sediment Slurry	MKLLTKEEKILNDGLEKVSEKKDNMDWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAF
Ga0373914_0043988_3_224	3300034419	Sediment Slurry	MKLMTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAFLIPISKSARLQSIS
Ga0373906_149027_116_373	3300034815	Sediment Slurry	MEEVWTSFPNWMKPMMKDEKRLNEGLENASEKQDNRDWISCLAFLILTGCSPFWAKVKLTLSLAYYRITAFFIPILKSAILQLIY
Ga0373916_0005497_3_185	3300034894	Sediment Slurry	MKLLTKEEKILNDGLEKVSEKKDNMNWISSLAFLNSIGCSPFWAKVKLALSLAYYRITAF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F094833

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences