Metagenome / Metatranscriptome Family F091420

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F091420
Family Type	Metagenome / Metatranscriptome
Number of Sequences	107
Average Sequence Length	45 residues
Representative Sequence	EQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN
Number of Associated Samples	95
Number of Associated Scaffolds	107

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	99.07 %
% of genes from short scaffolds (< 2000 bps)	99.07 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (98.131 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil (27.103 % of family members)
Environment Ontology (ENVO)	Unclassified (45.794 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.813 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 22.22% β-sheet: 0.00% Coil/Unstructured: 77.78%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF00005	ABC_tran	0.93

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
All Organisms	root	All Organisms	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
cellular organisms	root	All Organisms → cellular organisms	1.87 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Caryophyllales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Chenopodiaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Betoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Beta	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Beta vulgaris	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.13 %
Beta vulgaris subsp. vulgaris	subspecies	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	0.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.93 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002647\|Ga0005469J37257_100063	Not Available	594	Open in IMG/M
3300002648\|Ga0005468J37256_102263	Not Available	582	Open in IMG/M
3300002656\|Ga0005494J37277_105634	Not Available	582	Open in IMG/M
3300002661\|Ga0005496J37278_101392	Not Available	584	Open in IMG/M
3300002668\|Ga0005482J37270_102208	Not Available	543	Open in IMG/M
3300002669\|Ga0005479J37267_100543	Not Available	566	Open in IMG/M
3300002671\|Ga0005481J37269_100081	Not Available	590	Open in IMG/M
3300002673\|Ga0005480J37268_103404	Not Available	582	Open in IMG/M
3300002675\|Ga0005473J37261_100748	Not Available	503	Open in IMG/M
3300002675\|Ga0005473J37261_103078	Not Available	587	Open in IMG/M
3300002680\|Ga0005483J37271_100249	Not Available	576	Open in IMG/M
3300002680\|Ga0005483J37271_101798	Not Available	589	Open in IMG/M
3300002681\|Ga0005471J37259_100452	Not Available	591	Open in IMG/M
3300003551\|Ga0005498J51100_100377	Not Available	559	Open in IMG/M
3300004104\|Ga0058891_1574701	Not Available	582	Open in IMG/M
3300004115\|Ga0058890_101916	Not Available	566	Open in IMG/M
3300004116\|Ga0058885_1007274	Not Available	502	Open in IMG/M
3300004116\|Ga0058885_1258001	Not Available	566	Open in IMG/M
3300004119\|Ga0058887_1498137	Not Available	587	Open in IMG/M
3300004133\|Ga0058892_1008232	Not Available	700	Open in IMG/M
3300004134\|Ga0058906_1011040	Not Available	585	Open in IMG/M
3300004135\|Ga0058884_1028027	Not Available	741	Open in IMG/M
3300004139\|Ga0058897_11167054	Not Available	588	Open in IMG/M
3300004140\|Ga0058894_1474954	Not Available	582	Open in IMG/M
3300004473\|Ga0068919_1016986	Not Available	584	Open in IMG/M
3300004593\|Ga0068946_1011572	Not Available	578	Open in IMG/M
3300004600\|Ga0068964_1011040	Not Available	588	Open in IMG/M
3300004613\|Ga0068937_1018355	Not Available	585	Open in IMG/M
3300004617\|Ga0068955_1025111	Not Available	580	Open in IMG/M
3300004631\|Ga0058899_10093200	Not Available	567	Open in IMG/M
3300004631\|Ga0058899_10158553	Not Available	725	Open in IMG/M
3300004631\|Ga0058899_10200468	Not Available	594	Open in IMG/M
3300007219\|Ga0075025_1000681	Not Available	550	Open in IMG/M
3300007219\|Ga0075025_1007237	Not Available	561	Open in IMG/M
3300007219\|Ga0075025_1009966	Not Available	563	Open in IMG/M
3300007327\|Ga0075016_1017758	Not Available	549	Open in IMG/M
3300008785\|Ga0103638_1002835	Not Available	590	Open in IMG/M
3300010154\|Ga0127503_10139613	Not Available	576	Open in IMG/M
3300010859\|Ga0126352_1133411	Not Available	557	Open in IMG/M
3300010860\|Ga0126351_1087326	Not Available	582	Open in IMG/M
3300011019\|Ga0138557_107195	Not Available	562	Open in IMG/M
3300011034\|Ga0138549_135627	Not Available	507	Open in IMG/M
3300011059\|Ga0138597_1011709	Not Available	531	Open in IMG/M
3300011076\|Ga0138574_1055726	Not Available	590	Open in IMG/M
3300011085\|Ga0138581_1176816	Not Available	515	Open in IMG/M
3300011120\|Ga0150983_10232068	Not Available	501	Open in IMG/M
3300011120\|Ga0150983_12371310	Not Available	506	Open in IMG/M
3300011282\|Ga0138293_140789	Not Available	581	Open in IMG/M
3300019160\|Ga0184577_100360	Not Available	578	Open in IMG/M
3300019192\|Ga0184603_112219	Not Available	533	Open in IMG/M
3300019199\|Ga0187789_1315308	Not Available	553	Open in IMG/M
3300019241\|Ga0187793_1066549	Not Available	589	Open in IMG/M
3300019251\|Ga0187795_1216474	Not Available	584	Open in IMG/M
3300019265\|Ga0187792_1014170	Not Available	512	Open in IMG/M
3300021170\|Ga0210400_10105821	All Organisms → cellular organisms → Bacteria	2233	Open in IMG/M
3300021856\|Ga0213850_1244218	Not Available	582	Open in IMG/M
3300021856\|Ga0213850_1339787	Not Available	574	Open in IMG/M
3300021858\|Ga0213852_1105965	Not Available	501	Open in IMG/M
3300021858\|Ga0213852_1302528	Not Available	585	Open in IMG/M
3300021860\|Ga0213851_1667121	Not Available	586	Open in IMG/M
3300021860\|Ga0213851_1667863	Not Available	582	Open in IMG/M
3300021861\|Ga0213853_10513211	Not Available	556	Open in IMG/M
3300021929\|Ga0213845_1138342	Not Available	549	Open in IMG/M
3300021938\|Ga0213847_1091961	Not Available	506	Open in IMG/M
3300022499\|Ga0242641_1022108	Not Available	652	Open in IMG/M
3300022502\|Ga0242646_1012768	Not Available	724	Open in IMG/M
3300022504\|Ga0242642_1015046	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Chenopodiaceae → Betoideae → Beta → Beta vulgaris → Beta vulgaris subsp. vulgaris	998	Open in IMG/M
3300022510\|Ga0242652_1037394	Not Available	580	Open in IMG/M
3300022513\|Ga0242667_1010159	Not Available	843	Open in IMG/M
3300022522\|Ga0242659_1097923	Not Available	577	Open in IMG/M
3300022523\|Ga0242663_1067083	Not Available	664	Open in IMG/M
3300022713\|Ga0242677_1033911	Not Available	694	Open in IMG/M
3300022715\|Ga0242678_1059526	Not Available	570	Open in IMG/M
3300022724\|Ga0242665_10398649	Not Available	502	Open in IMG/M
3300023541\|Ga0247544_102116	Not Available	556	Open in IMG/M
3300023544\|Ga0247542_104095	Not Available	584	Open in IMG/M
3300030743\|Ga0265461_11416293	Not Available	742	Open in IMG/M
3300030805\|Ga0265756_114584	Not Available	539	Open in IMG/M
3300030812\|Ga0265734_104777	Not Available	578	Open in IMG/M
3300030814\|Ga0265741_110247	Not Available	652	Open in IMG/M
3300030824\|Ga0265726_104863	Not Available	571	Open in IMG/M
3300030843\|Ga0075392_11302797	Not Available	652	Open in IMG/M
3300030845\|Ga0075397_11004308	Not Available	599	Open in IMG/M
3300030849\|Ga0075393_10976672	Not Available	612	Open in IMG/M
3300030850\|Ga0075387_11247160	Not Available	516	Open in IMG/M
3300030852\|Ga0075389_11402072	Not Available	683	Open in IMG/M
3300030855\|Ga0075374_10000056	Not Available	755	Open in IMG/M
3300030877\|Ga0265777_117391	Not Available	574	Open in IMG/M
3300030882\|Ga0265764_108107	Not Available	631	Open in IMG/M
3300030885\|Ga0265743_114067	Not Available	582	Open in IMG/M
3300030888\|Ga0265769_113802	Not Available	586	Open in IMG/M
3300030917\|Ga0075382_11760484	Not Available	623	Open in IMG/M
3300030923\|Ga0138296_1684730	Not Available	720	Open in IMG/M
3300030966\|Ga0075383_11398089	Not Available	659	Open in IMG/M
3300030982\|Ga0265748_106632	Not Available	580	Open in IMG/M
3300031011\|Ga0265774_104700	Not Available	580	Open in IMG/M
3300031017\|Ga0265744_110112	Not Available	579	Open in IMG/M
3300031022\|Ga0138301_1076595	Not Available	632	Open in IMG/M
3300031042\|Ga0265749_103459	Not Available	573	Open in IMG/M
3300031043\|Ga0265779_111150	Not Available	559	Open in IMG/M
3300031128\|Ga0170823_16751849	Not Available	743	Open in IMG/M
3300031469\|Ga0170819_16940217	Not Available	708	Open in IMG/M
3300031590\|Ga0307483_1027827	Not Available	582	Open in IMG/M
3300031590\|Ga0307483_1028405	Not Available	579	Open in IMG/M
3300031677\|Ga0307480_1014834	Not Available	582	Open in IMG/M
3300031829\|Ga0316050_106605	Not Available	583	Open in IMG/M
3300032515\|Ga0348332_10047003	Not Available	583	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.98%
Aquatic	Environmental → Aquatic	14.02%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.05%
Freshwater	Environmental → Aquatic → Freshwater	14.02%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.27%
Loam	Environmental → Terrestrial → Soil → Loam	27.10%
Sediment	Environmental → Aquatic → Freshwater → Sediment	13.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.67%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	27.10%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.23%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	13.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.67%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.93%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.93%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	27.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.82%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	13.08%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	9.35%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	3.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.87%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.87%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.93%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.93%
Wetland Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Wetland Soil	0.93%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002647	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF118 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002648	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF117 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002656	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF143 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002661	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF145 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002668	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF131 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002669	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF128 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002671	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF130 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002673	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF129 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002675	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF122 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002680	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF132 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002681	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300003551	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF147 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004115	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF216 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004116	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF206 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004133	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF220 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004134	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF248 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004135	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004140	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004473	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004593	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 34 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004600	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 56 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004613	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 25 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004617	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007219	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2013 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007327	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaT_ABR_2013 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300008785	Microbial communities from wetland soil in Czech Republic - R1_cDNA	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011019	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 38 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011034	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 30 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011059	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 44 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011076	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011085	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011282	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaT_SC_2012 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300019160	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019192	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019199	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019241	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019251	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021856	Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - LL:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021929	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - DR:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021938	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - EE:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022502	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023541	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023544	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030805	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030812	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030824	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030843	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030845	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030849	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030850	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB1 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030852	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030877	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030882	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030885	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030888	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030923	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030982	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031011	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031017	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031042	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031043	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031677	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031829	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0005469J37257_1000631	3300002647	Forest Soil	GFTEQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN*
Ga0005468J37256_1022631	3300002648	Forest Soil	EQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN*
Ga0005494J37277_1056341	3300002656	Forest Soil	EQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSHGELFSGTLN*
Ga0005496J37278_1013921	3300002661	Forest Soil	TEQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSHGELFSGTLN*
Ga0005482J37270_1022081	3300002668	Forest Soil	SSRVERSETGTMIRRLITKSEWQAGSEGKSGGSHGELFSGTLN*
Ga0005479J37267_1005431	3300002669	Forest Soil	TEQSSRVERSETGTMIRQAITKSEWRAGSEGKSGGSRGELFSGTLN*
Ga0005481J37269_1000811	3300002671	Forest Soil	GFTEQSSRVERSETGTMIRRLITKNEWQAGSEGKSGGSQGELFSGTLN*
Ga0005480J37268_1034041	3300002673	Forest Soil	EQSSRVERSETGTMIRRLITKSEWRAGSEGKSGGSQGELFSGTLN*
Ga0005473J37261_1007481	3300002675	Forest Soil	QSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSHGELFSGTLN*
Ga0005473J37261_1030781	3300002675	Forest Soil	FTEQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGPQGELLSGTLN*
Ga0005483J37271_1002491	3300002680	Forest Soil	GFTEQSSRVERSETGTMIRRLITKNEWRAGSEGKSGGSRGELLSGTLN*
Ga0005483J37271_1017981	3300002680	Forest Soil	GFMEQLSRVKRSGPGTMIRRPIAKSERWTGSEGKSGVSHGELFGSRLN*
Ga0005471J37259_1004521	3300002681	Forest Soil	GFTEQSNRVESSETGTMIRKLIAKRDRQAGSEGKSGDSQGELFSGTLS*
Ga0005498J51100_1003771	3300003551	Forest Soil	FTEQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSHGELFSGTLN*
Ga0058891_15747011	3300004104	Forest Soil	TEQSSRVERSETGTMICQPITKSERRAGSEGKSGGSRGELFSGTLN*
Ga0058890_1019161	3300004115	Forest Soil	TEQSNRVESSETGTMIRKLIAKRDRQAGSEGKSGDSQGELFSGTLS*
Ga0058885_10072741	3300004116	Forest Soil	FTEQSSRVERSETGTMIRRLITKSEWRAGSEGKSGGSQGELFSGTLN*
Ga0058885_12580011	3300004116	Forest Soil	RVKRSGPGTMIRRPIAKSERWTGSEGKSGVSHGELFGSRLN*
Ga0058887_14981371	3300004119	Forest Soil	GFTEQSSRVERSETGTMIRRLITKSEKAAGSEGKSGGSQGELLSGTLN*
Ga0058892_10082322	3300004133	Forest Soil	FTEQSNRVESSETGTMIRKLIAKRDRQAGSEGKSGDSQGELFSGTLS*
Ga0058906_10110403	3300004134	Forest Soil	EQLSRVKRSGPGTMIRRPIAKSERWTGSEGKSGVSHGELFGSRLN*
Ga0058884_10280271	3300004135	Forest Soil	SKGFTEQSSRVEGSEPGTMIRRPIAKSKRPTGSERESGSPQGELFSGRLG*
Ga0058897_111670541	3300004139	Forest Soil	FTEQSSQVEGSEPGTMIRRPIAKSERPTGSERESGGPQGELFSGRLG*
Ga0058894_14749541	3300004140	Forest Soil	TEQSSQVEGSEPGTMIRRPIAKSERPTGSERESGGPQGEPFSGRLG*
Ga0068919_10169861	3300004473	Peatlands Soil	FTEQSSRVKRSETGTMIRRPITKSERRAGSEGKSGGLRGELFSGTLN*
Ga0068946_10115721	3300004593	Peatlands Soil	TEQSSRVKRSEAGTMIRRPITKSERRAGSEGKSGGSRGELFSGTLN*
Ga0068964_10110401	3300004600	Peatlands Soil	GFTEQSSRVKRSEAGTMIRRPITKSERRAGSEGKSGGSRGELFSGTLN*
Ga0068937_10183551	3300004613	Peatlands Soil	FTEQSSRVKRSEAGTMIRRPITKSERRAGSEGKSGGSRGELFSGTLN*
Ga0068955_10251112	3300004617	Peatlands Soil	EQSSRVKRSEAGTMIRRPITKSERRAGSEGKSGGSRGELFSGTLN*
Ga0058899_100932001	3300004631	Forest Soil	SEQSSRVERSETGTMIRRLITRSEKAAGSEGKSGGSQGELLSGTLN*
Ga0058899_101585532	3300004631	Forest Soil	KGFTEQSNRVESSETGTMIRKLIAKRDRQAGSEGKSGDSQGELFSGTLS*
Ga0058899_102004682	3300004631	Forest Soil	EQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGPQGELFSGTLN*
Ga0075025_10006811	3300007219	Watersheds	TGTMIRRPITKSERPAGSEGKSGGPQGELFSGTLN*
Ga0075025_10072372	3300007219	Watersheds	VERSETGTMIRRLITKSERPAGSEGKSGGSRGELFSGTLN*
Ga0075025_10099661	3300007219	Watersheds	EQSSRVERSETGTMIRRLITKSERPAGSEGKSGGSQGELFSGTLN*
Ga0075016_10177582	3300007327	Watersheds	TGTMIRRPITKSERPAGSEGKSGGSQGELFSGTLN*
Ga0103638_10028352	3300008785	Wetland Soil	EQSSRVERSGTGTMIRRLITKSERQAGSEGKSGGPRGELFSGTLN*
Ga0127503_101396132	3300010154	Soil	EQSSRVKRSETGTMIRRLITKSEWRAGSEGKSGGSRGELFSGTLN*
Ga0126352_11334112	3300010859	Boreal Forest Soil	FTEQSSRVERSETGTMIRRLITKSEKAAGSEGKSGGSQGELFSGTLN*
Ga0126351_10873261	3300010860	Boreal Forest Soil	TEQSSRVERSETGTMIRRLITKSEKAAGSEGKSGGSQGELFSGTLN*
Ga0138557_1071951	3300011019	Peatlands Soil	SSRVKRSEAGTMIRRPITKSERRAGSEGKSGGSRGELFSGTLN*
Ga0138549_1356271	3300011034	Peatlands Soil	RSEAGTMIRRPITKSERRAGSEGKSGGSRGELFSGTLN*
Ga0138597_10117091	3300011059	Peatlands Soil	EQSSRVKRSEAGTMIRTPITKSERRAGSEGKSGGLRGELFSGTLN*
Ga0138574_10557261	3300011076	Peatlands Soil	KGFTEQSSRVKRSEAGTMIRRPITKSERRAGSEGKSGGSRGELFSGTLN*
Ga0138581_11768161	3300011085	Peatlands Soil	SKGFTEQSSRVKRSEAGTMIRRPITKSERRAGSEGKSGGSRGELFSGTLN*
Ga0150983_102320681	3300011120	Forest Soil	TEQSSRVERSGTGTMIRRPITKSERPAGSEGKSGGPQGELFSGTLN*
Ga0150983_123713101	3300011120	Forest Soil	FTEQSSRVERSETGTMIRRLITRSEKAAGSEGKSGGSQGELLSGTLN*
Ga0138293_1407891	3300011282	Watersheds	EQSSRVERSETGTMIRRPIAKSERQAGSEGKSGGSQGELFSGTLD*
Ga0184577_1003602	3300019160	Soil	EQSSRVGRSETGTMIRRLIAKSERPAGSEGKSGGSRGELFSGTLN
Ga0184603_1122192	3300019192	Soil	EQSSRVERSETGTMIRRPITKSERSAGSEGKSGGSPGELFSGTLD
Ga0187789_13153081	3300019199	Peatland	EPGTMIRRLIAKSERLEGSEGKSGGSQGELFSGALD
Ga0187793_10665491	3300019241	Peatland	FTEQSSRVERSETGTMIRRLITKSEWRAGSDGKSGGSRGELFSGALS
Ga0187795_12164741	3300019251	Peatland	TEQSSRVERSETGTMIRRLITKSEWRAGSDGKSGGSRGELFSGALS
Ga0187792_10141701	3300019265	Peatland	GFTEQSSRGKRSEPGTMIRELSAKSEQPEGSEGKSGGSQGELFSGALD
Ga0210400_101058211	3300021170	Soil	RVERSETGTMIRRLITKSEWQAGSEGKSGGSHGELFSGTLN
Ga0213850_12442181	3300021856	Watersheds	EQSSRVKSSETGTMIRRLIAKSEKQAGSEGKSGGSRGELFSGTLN
Ga0213850_13397871	3300021856	Watersheds	QSSRVERSETGTMIRRPITKSERQAGSEGKSGGSQGELFSG
Ga0213852_11059651	3300021858	Watersheds	SSETGTMIRKLIAKRDRQAGSEGKSGDSQGELFSGTLS
Ga0213852_13025281	3300021858	Watersheds	TEQSSRVERSETGTMIRRLITKSEKPVGSEGKSGGPQGELFSGTLS
Ga0213851_16671211	3300021860	Watersheds	FTEQSSRVERSETGTMIRRLITKSEKPVGSEGKSGGPQGELFSGTLS
Ga0213851_16678631	3300021860	Watersheds	EQSSRVERSETGTMIRRPITKSERRAGSEGKSGGPRGELFSGTLN
Ga0213853_105132111	3300021861	Watersheds	SETGTMIRRPIAKSERQAGSEGKSGGSQGELFSGTLN
Ga0213845_11383421	3300021929	Watersheds	PGTMIRRPIAKSERPTGSERKSGGPQGEPFSGRLG
Ga0213847_10919611	3300021938	Watersheds	FTEQSSRVSRSETGTMIRRLIAKSERLAGSEGKSGGLPGELFSG
Ga0242641_10221083	3300022499	Soil	EQSNRVESSETGTMFRKLIARRDSQAGSEGKSGDSQGELFSGTLS
Ga0242646_10127681	3300022502	Soil	SRVERSETGTMIRRLITKSEWQAGSEGKSGGSHGELFSGTLN
Ga0242642_10150461	3300022504	Soil	ERSETGTMIRRLITKSEWQAGSEGKSGGSHGELFSGTLN
Ga0242652_10373941	3300022510	Soil	EQSSRVERSETGTMICQPITKSERRAGSEGKSGGSRGELFSGTLN
Ga0242667_10101591	3300022513	Soil	MGFHRESAEQSSRVERSETGTMIRRLITKSEWRAGSEGKSGGSQGELFSGTLN
Ga0242659_10979231	3300022522	Soil	QSSRVERSETGTMICQPITKSERRAGSEGKSGGSRGELFSGTLN
Ga0242663_10670832	3300022523	Soil	EQSSRVERSETGTMIRRLITKSEWRAGSEGKSGGSQGELFSGTLN
Ga0242677_10339112	3300022713	Soil	FTEQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSHGELFSGTLN
Ga0242678_10595262	3300022715	Soil	EQSSRVERSETGTMIRRLITKNEWQAGSEGKSGGSQGELFSGTLN
Ga0242665_103986491	3300022724	Soil	SSRVERSETETMIRRLITKNEWQAGSEGKSGGSQGELFSGTLN
Ga0247544_1021162	3300023541	Soil	SSRVERSETGTMIRRPITKSERSAGSEGKSGGSPGELFSGTLD
Ga0247542_1040951	3300023544	Soil	TEQSSRVERSETGTMIRRPITKSERSAGSEGKSGGSPGELFSGTLD
Ga0265461_114162931	3300030743	Soil	KGFTEQSSRVKRSETGTMIRRPITKSERPAGSEGKSGGLRGELFSGTLN
Ga0265756_1145842	3300030805	Soil	EQSSRVERSETGTMIRRPITKSEWQAGSEGKSGGPQGELFSGTLN
Ga0265734_1047771	3300030812	Soil	TEQSSRVKRSETGTMIRRPITKSERSAGSEGKSGGLRGELFSGTLN
Ga0265741_1102471	3300030814	Soil	EQSNLVESSETGTMIRKLIAKRDRQAGSEGKSGDSQGELFSGTLS
Ga0265726_1048631	3300030824	Soil	EQSSRVERSETGTMIRRLITKSEKAAGSEGKSGGSQGELLSGTLN
Ga0075392_113027971	3300030843	Soil	TEQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN
Ga0075397_110043082	3300030845	Soil	RSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN
Ga0075393_109766721	3300030849	Soil	GFTEQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN
Ga0075387_112471601	3300030850	Soil	VERSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN
Ga0075389_114020721	3300030852	Soil	KGFTEQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN
Ga0075374_100000561	3300030855	Soil	SRVERSETGTMIRRLITKNEWQAGSEGKSGGSQGELFSGTLN
Ga0265777_1173912	3300030877	Soil	TEQSNRVESSETGTMIRKLIAKRDRQAGSEGKSGDSQGELFSGTLN
Ga0265764_1081071	3300030882	Soil	EQSSRVKRSETGTMIRRPITKSERSAGSEGKSGGLRGELFSGTLN
Ga0265743_1140671	3300030885	Soil	EQSSRVERSETGTMIRRPITKSEWQAGSEGKSGGSQGELFSGTLN
Ga0265769_1138021	3300030888	Soil	FTEQSSRVKRSETGTMIRRPITKSERSAGSEGKSGGLRGELFSGTLN
Ga0075382_117604841	3300030917	Soil	ERSETGTMIRRLIAKSEWQAGSEGKSGGSQGELFSGTLN
Ga0138296_16847301	3300030923	Soil	RGFTEQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSHGELFSGTLN
Ga0075383_113980891	3300030966	Soil	QSSRVERSETGTMIRRLIAKSEWQAGSEGKSGGSQGELFSGTLN
Ga0265748_1066321	3300030982	Soil	EQSSRVERSESGTMIRRLITKSKWRAGSEGKSGGSQGELFSGTLN
Ga0265774_1047001	3300031011	Soil	TEQLSRVERSETGTMIRRLIAKSEMQAGSEGKSGGSRGELFSGTLN
Ga0265744_1101121	3300031017	Soil	TEQSSRVERSETGTMIRGLIAKSEKQAGSEGKSGGSRGELFSGTLN
Ga0138301_10765952	3300031022	Soil	RVERSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN
Ga0265749_1034591	3300031042	Soil	QSSRVERSETGTMIRGLITKSERLAGSEGKSGGSRGELFSGTLN
Ga0265779_1111501	3300031043	Soil	RSETGTMIRRPITKSERRAGSEGKSGGLRGELFSGTLN
Ga0170823_167518491	3300031128	Forest Soil	ETGTMIRRSITKSEWQAGSEGKSGGSQGELFSGTLN
Ga0170819_169402172	3300031469	Forest Soil	SRVERSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN
Ga0307483_10278271	3300031590	Hardwood Forest Soil	TEQSSRVERSETGTMIRRPITKSERPAGSEGKSGGTSGELFSGALS
Ga0307483_10284052	3300031590	Hardwood Forest Soil	SSRVERSETGTMIRRLITKNEWQAGSEGKSGGSQGELFSGTLN
Ga0307480_10148341	3300031677	Hardwood Forest Soil	EQSSRVERSETGTMIRRLITKSEWQAGSEGKSGGSQGELFSGTLN
Ga0316050_1066051	3300031829	Soil	EQSSRVERSETGTMTRKPITQSERSAGSEGKSGGSPGELFSGTLD
Ga0348332_100470031	3300032515	Plant Litter	TEQSNRVESSETGTMIRKLIAKRDRQAGSEGKSGDSQGELFSGTLS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F091420

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences