Metagenome Family F091086

Overview

Basic Information

• Family ID: F091086
• Family Type: Metagenome
• Number of Sequences: 107
• Average Sequence Length: 60 residues
• Representative Sequence: MQDIINTIKISNNPNEVKQILKPLKIKEVIKIAKGLGVCIRGNENKTEIINNIILGIMK
• Number of Associated Samples: 10
• Number of Associated Scaffolds: 107

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 93.46 %
• % of genes near scaffold ends (potentially truncated): 5.61 %
• % of genes from short scaffolds (< 2000 bps): 27.10 %
• Associated GOLD sequencing projects: 8
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (43.925 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil (64.486 % of family members)
• Environment Ontology (ENVO): Unclassified (65.421 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Subsurface (non-saline) (100.000 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 47.13%
  β-sheet: 0.00%
  Coil/Unstructured: 52.87%

Predicted 3D Structure

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.140.4.1: Recombination endonuclease VII, C-terminal and dimerization domains	d1e7la1	1e7l	0.68512
a.80.1.1: DNA polymerase III clamp loader subunits, C-terminal domain	d1jr3a1	1jr3	0.67979
a.80.1.1: DNA polymerase III clamp loader subunits, C-terminal domain	d1sxjb1	1sxj	0.67336
a.80.1.2: MgsA/YrvN C-terminal domain-like	d3bgea1	3bge	0.67314
a.262.1.1: PriB N-terminal domain-like	d1zt2b1	1zt2	0.66785

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 107 Family Scaffolds
PF04545	Sigma70_r4	7.48
PF03851	UvdE	7.48
PF00929	RNase_T	4.67
PF12844	HTH_19	4.67
PF00149	Metallophos	2.80
PF00145	DNA_methylase	2.80
PF01844	HNH	2.80
PF02452	PemK_toxin	1.87
PF13328	HD_4	1.87
PF14359	DUF4406	1.87
PF14354	Lar_restr_allev	1.87
PF00589	Phage_integrase	1.87
PF14072	DndB	1.87
PF00847	AP2	1.87
PF01555	N6_N4_Mtase	1.87
PF07927	HicA_toxin	0.93
PF13708	DUF4942	0.93
PF12850	Metallophos_2	0.93
PF00753	Lactamase_B	0.93
PF15714	SpoVT_C	0.93
PF01885	PTS_2-RNA	0.93
PF13671	AAA_33	0.93
PF02498	Bro-N	0.93
PF01467	CTP_transf_like	0.93
PF06866	DUF1256	0.93
PF04480	DUF559	0.93
PF09397	FtsK_gamma	0.93
PF04542	Sigma70_r2	0.93
PF09643	YopX	0.93
PF04055	Radical_SAM	0.93
PF01943	Polysacc_synt	0.93
PF04851	ResIII	0.93
PF06908	YpsA	0.93
PF10543	ORF6N	0.93

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 107 Family Scaffolds
COG4294	UV DNA damage repair endonuclease	Replication, recombination and repair [L]	7.48
COG0270	DNA-cytosine methylase	Replication, recombination and repair [L]	2.80
COG0863	DNA modification methylase	Replication, recombination and repair [L]	1.87
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	1.87
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	1.87
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	1.87
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.93
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.93
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.93
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.93
COG1859	RNA:NAD 2'-phosphotransferase, TPT1/KptA family	Translation, ribosomal structure and biogenesis [J]	0.93
COG3617	Prophage antirepressor	Mobilome: prophages, transposons [X]	0.93
COG4474	Uncharacterized SPBc2 prophage-derived protein YoqJ	Mobilome: prophages, transposons [X]	0.93
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.93

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.49 %
Unclassified	root	N/A	34.58 %
Niallia	genus	Niallia	0.93 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	44.86 %
Unclassified	root	N/A	34.58 %
Viruses	superkingdom	All Organisms → Viruses	19.63 %
unclassified Niallia	no rank	Niallia → unclassified Niallia	0.93 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.93 %
Unclassified	root	N/A	34.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.82 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	2.80 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %
Niallia sp. MER 6	species	Niallia → unclassified Niallia → Niallia sp. MER 6	0.93 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.82 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	2.80 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %
Niallia sp. MER 6	species	Niallia → unclassified Niallia → Niallia sp. MER 6	0.93 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	31.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.82 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	2.80 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %
Niallia sp. MER 6	species	Niallia → unclassified Niallia → Niallia sp. MER 6	0.93 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.82 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	5.61 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	3.74 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2.80 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %
Niallia sp. MER 6	species	Niallia → unclassified Niallia → Niallia sp. MER 6	0.93 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.82 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	5.61 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.80 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.80 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %
Niallia sp. MER 6	species	Niallia → unclassified Niallia → Niallia sp. MER 6	0.93 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.82 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.80 %
Paenibacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae	0.93 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %
Niallia sp. MER 6	species	Niallia → unclassified Niallia → Niallia sp. MER 6	0.93 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.82 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.80 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.93 %
Paenibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %
Niallia sp. MER 6	species	Niallia → unclassified Niallia → Niallia sp. MER 6	0.93 %

Level 10

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.58 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.82 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.80 %
Paenibacillus cremeus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus cremeus	0.93 %
Clostridium botulinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	0.93 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.93 %
Niallia sp. MER 6	species	Niallia → unclassified Niallia → Niallia sp. MER 6	0.93 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300001041|C687J13239_1000686	Not Available	16525
3300001041|C687J13239_1000959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	13073
3300001041|C687J13239_1001269	All Organisms → cellular organisms → Bacteria	10633
3300001041|C687J13239_1001346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	10225
3300001041|C687J13239_1003191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	5451
3300001041|C687J13239_1003242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5383
3300001041|C687J13239_1003795	All Organisms → Viruses → Predicted Viral	4774
3300001041|C687J13239_1004184	All Organisms → Viruses → Predicted Viral	4466
3300001041|C687J13239_1004242	All Organisms → Viruses → Predicted Viral	4429
3300001041|C687J13239_1004693	All Organisms → Viruses → Predicted Viral	4113
3300001041|C687J13239_1004792	All Organisms → Viruses → Predicted Viral	4054
3300001041|C687J13239_1005403	All Organisms → Viruses → Predicted Viral	3734
3300001041|C687J13239_1005550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3667
3300001041|C687J13239_1005780	All Organisms → Viruses → Predicted Viral	3551
3300001041|C687J13239_1005816	Not Available	3534
3300001041|C687J13239_1007884	All Organisms → Viruses → Predicted Viral	2797
3300001041|C687J13239_1009261	All Organisms → Viruses → Predicted Viral	2475
3300001041|C687J13239_1010391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2262
3300001041|C687J13239_1010981	Not Available	2166
3300001041|C687J13239_1012762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1924
3300001041|C687J13239_1015099	Not Available	1651
3300001041|C687J13239_1015353	All Organisms → Viruses → Predicted Viral	1625
3300001041|C687J13239_1016678	All Organisms → Viruses → Predicted Viral	1503
3300001041|C687J13239_1019792	Not Available	1270
3300001041|C687J13239_1022290	Not Available	1129
3300001041|C687J13239_1024860	Not Available	1015
3300001041|C687J13239_1026961	Not Available	934
3300001041|C687J13239_1034207	Not Available	739
3300001041|C687J13239_1045157	Not Available	562
3300001242|C687J13896_1007070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	3308
3300001242|C687J13896_1012210	All Organisms → Viruses → Predicted Viral	2037
3300001242|C687J13896_1014123	Niallia → unclassified Niallia → Niallia sp. MER 6	1784
3300024999|Ga0209728_1000024	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	158071
3300024999|Ga0209728_1000028	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	150268
3300024999|Ga0209728_1000044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	121089
3300024999|Ga0209728_1000047	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	119639
3300024999|Ga0209728_1000048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	118022
3300024999|Ga0209728_1000064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	99399
3300024999|Ga0209728_1000161	All Organisms → cellular organisms → Bacteria	61805
3300024999|Ga0209728_1000221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	53943
3300024999|Ga0209728_1000254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	49018
3300024999|Ga0209728_1000266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	47881
3300024999|Ga0209728_1000289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	45696
3300024999|Ga0209728_1000300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	44903
3300024999|Ga0209728_1000320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	43162
3300024999|Ga0209728_1000424	All Organisms → cellular organisms → Bacteria	35914
3300024999|Ga0209728_1000433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	35512
3300024999|Ga0209728_1000583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	27752
3300024999|Ga0209728_1000601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	27154
3300024999|Ga0209728_1000729	All Organisms → cellular organisms → Bacteria	23844
3300024999|Ga0209728_1000895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	20650
3300024999|Ga0209728_1000975	All Organisms → cellular organisms → Bacteria	19378
3300024999|Ga0209728_1001174	All Organisms → cellular organisms → Bacteria	16988
3300024999|Ga0209728_1001215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	16548
3300024999|Ga0209728_1001342	Not Available	15427
3300024999|Ga0209728_1001343	All Organisms → cellular organisms → Bacteria	15402
3300024999|Ga0209728_1001454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	14484
3300024999|Ga0209728_1001625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	13227
3300024999|Ga0209728_1001886	All Organisms → cellular organisms → Bacteria	11619
3300024999|Ga0209728_1001905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	11516
3300024999|Ga0209728_1001926	Not Available	11366
3300024999|Ga0209728_1001980	All Organisms → cellular organisms → Bacteria	11142
3300024999|Ga0209728_1002214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	10152
3300024999|Ga0209728_1002225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	10116
3300024999|Ga0209728_1002246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	10042
3300024999|Ga0209728_1002466	Not Available	9276
3300024999|Ga0209728_1002585	All Organisms → cellular organisms → Bacteria	8933
3300024999|Ga0209728_1002643	All Organisms → cellular organisms → Bacteria	8788
3300024999|Ga0209728_1003053	Not Available	7858
3300024999|Ga0209728_1003067	All Organisms → cellular organisms → Bacteria	7819
3300024999|Ga0209728_1003400	Not Available	7183
3300024999|Ga0209728_1003894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6410
3300024999|Ga0209728_1004055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → Paenibacillus cremeus	6127
3300024999|Ga0209728_1004732	Not Available	5373
3300024999|Ga0209728_1005888	All Organisms → Viruses → Predicted Viral	4481
3300024999|Ga0209728_1007369	All Organisms → Viruses → Predicted Viral	3682
3300024999|Ga0209728_1007376	All Organisms → Viruses → Predicted Viral	3679
3300024999|Ga0209728_1007403	Not Available	3669
3300024999|Ga0209728_1008043	All Organisms → Viruses → Predicted Viral	3420
3300024999|Ga0209728_1008266	Not Available	3340
3300024999|Ga0209728_1008500	Not Available	3253
3300024999|Ga0209728_1010137	All Organisms → Viruses → Predicted Viral	2805
3300024999|Ga0209728_1013908	Not Available	2125
3300024999|Ga0209728_1015938	Not Available	1882
3300024999|Ga0209728_1016443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	1829
3300024999|Ga0209728_1018446	Not Available	1652
3300024999|Ga0209728_1022001	Not Available	1397
3300024999|Ga0209728_1022093	Not Available	1392
3300024999|Ga0209728_1023182	Not Available	1331
3300024999|Ga0209728_1028342	Not Available	1111
3300024999|Ga0209728_1041596	Not Available	791
3300024999|Ga0209728_1042873	Not Available	769
3300024999|Ga0209728_1044211	Not Available	746
3300025000|Ga0209318_1000995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	21148
3300025000|Ga0209318_1001153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	18290
3300025000|Ga0209318_1002427	All Organisms → cellular organisms → Bacteria	9220
3300025000|Ga0209318_1002531	Not Available	8892
3300025000|Ga0209318_1008769	Not Available	3040
3300025000|Ga0209318_1017584	Not Available	1641
3300025000|Ga0209318_1031412	Not Available	940
3300025010|Ga0209319_1030676	Not Available	1325
3300025010|Ga0209319_1038625	Not Available	1120
3300025011|Ga0209000_1000671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	28747
3300025012|Ga0209727_1037042	All Organisms → Viruses → Predicted Viral	1618
3300025073|Ga0208245_1043443	All Organisms → cellular organisms → Archaea	994
3300025117|Ga0208958_1158948	Not Available	590
3300028602|Ga0265294_10473928	Not Available	769

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.13%
Terrestrial	Environmental → Terrestrial	1.87%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	98.13%
Soil	Environmental → Terrestrial → Soil	1.87%

Type

Habitat	Taxonomy	Distribution
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	98.13%
Loam	Environmental → Terrestrial → Soil → Loam	1.87%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	98.13%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.87%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	64.49%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	32.71%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.87%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.93%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300001041	Groundwater microbial communities from Rifle, Colorado, USA - Groundwater D2	Environmental
3300001242	Groundwater microbial communities from Rifle, Colorado - Groundwater E2	Environmental
3300024999	Soil microbial communities from Rifle, Colorado, USA - Groundwater D1	Environmental
3300025000	Soil microbial communities from Rifle, Colorado, USA - Groundwater E1	Environmental
3300025010	Groundwater microbial communities from Rifle, Colorado - Groundwater E2 (SPAdes)	Environmental
3300025011	Groundwater microbial communities from Rifle, Colorado, USA - Groundwater D2 (SPAdes)	Environmental
3300025012	Soil microbial communities from Rifle, Colorado, USA - Groundwater C1	Environmental
3300025073	Soil microbial communities from Rifle, Colorado - Rifle Oxygen_injection C1 (SPAdes)	Environmental
3300025117	Soil microbial communities from Rifle, Colorado - Rifle Oxygen_injection B1 (SPAdes)	Environmental
3300028602	Groundwater microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C687J13239_100068639	3300001041	Groundwater	MQDIINSIKISNNPNEVKQILKPLKIKEIIKIAKGLDVCIRGNENKTEIISNIILGIMK*
C687J13239_10009593	3300001041	Groundwater	MQDIINAIKISNNPNEVKQMLKALKIKEVIKIANGLNVYIRGNENKTEVISNIILGIIKET*
C687J13239_100126923	3300001041	Groundwater	MQDIINTIKISTNPNEVKQILKPLKIKDVINVAKALDVYIRGNENKTEIIGNIILGIIKYKRSD*
C687J13239_100134616	3300001041	Groundwater	MQDIINSIKLSNNPNEVKQILKPLKIKEVIKIAKCLDVCIRGNENKTEIISNIILEIMK*
C687J13239_10031911	3300001041	Groundwater	MQDIINTIKLSNNPNEVKQILKPLKIKEVIKVAKCLDICIRGNENKTEIINNIILGIMK*
C687J13239_100324211	3300001041	Groundwater	MQDIINTIKISTNSNEVKQILKPLKIKEVIKIAKGLDICIRGNENKTEVINNIILGIMK*
C687J13239_100379511	3300001041	Groundwater	MQNIVNMIKITNDPNKVKQLLKPLKIKDVIKIAKDLDICIRGNENKTEIINNIILEIMK*
C687J13239_10041847	3300001041	Groundwater	MRGVREVKIMQDIINTIKTSTNPNEVKQILKPLKIKEVIKIAKGLDVCIRGNENKTEIINNIILGIMK*
C687J13239_10042421	3300001041	Groundwater	LQDIINTIKISTNPNEVKQILKPLKIKDVIKIAKCLNICIRGNENKTEVIGNIILEIMK*
C687J13239_10046933	3300001041	Groundwater	MQDIINTIKISNNPNEVKQILKPLKIKEVIKIAKCLDVYIRGNENKTEIICNIILGIIK*
C687J13239_10047925	3300001041	Groundwater	MQDIINTIKISTNHNEVKQILKPLKIKEVIKIAKGLGICIRGNENKTEVINNIILGIMKGESI*
C687J13239_10054036	3300001041	Groundwater	MQDIINAIKLSTNHNEVKQILKPLKIKEVIKIAKCLGICIRENENKTEIINNIILGIIK*
C687J13239_10055501	3300001041	Groundwater	MQNIINYIKISNNPNEIKQILKPLKIKEVIKVAKCLNLPVRGNENKTEIIGNIIL
C687J13239_10057809	3300001041	Groundwater	MQDIINTIKLSTNPNEVKQVLKPLKIKEVIKIAKGLDVQIRGNENKIEIISNIILGIMK*
C687J13239_100581610	3300001041	Groundwater	MQDIINTIKLSTNPNEVKQILKPLKIKEVIKIAKGLGISIRGNENKTEIISNIILTIIK*
C687J13239_10078847	3300001041	Groundwater	MQDIINTIKISNNPNEVKKILKPLKIKEVVKIAKGLDICIRGNENKTEIICNIVLEVIKGD*
C687J13239_10092615	3300001041	Groundwater	MQDIINTIKTSNNPNEVKQILKPLKTKEVIKIAKCLGICIRGNENKTEIINNIILEIMK*
C687J13239_10103914	3300001041	Groundwater	MQDIINTIKLSTNPNEIKQILKPLKIKEVIKIAKGLNVCIRGNENKTEVINNIILGIIK*
C687J13239_10109811	3300001041	Groundwater	MQDIINTIKILNNPNEVKKILKPLKIKEVIKIAKGLGVCIRGNENKTEVISNIILAIMK*
C687J13239_10127625	3300001041	Groundwater	MQDIINTIKISTNHNEVKQILKPLKIKEVIKIAKGLGICIRGNENKTEIICNIILGIMK*
C687J13239_10150993	3300001041	Groundwater	MQDIINAIKISTNPNEVKQILKSLKIKDVIKVAKCLGIFIRGNENKTEIINNIILGIMK*
C687J13239_10153533	3300001041	Groundwater	MQNIINYIKISNNPNEIKQILKPLKIKEVVKIAKGLNLPVRGNENKTEIIGNIILGIIK*
C687J13239_10166784	3300001041	Groundwater	MQDIINTIKISNNPNEVKQILKPLKIKEVIKIAKGLGVCIRGNENKTEIINNIILGIMK*
C687J13239_10197921	3300001041	Groundwater	MQDIINTIRISNSPNEIKQILKPLKIKEVVKIAKCLDVCIRGNENKTEIISNIILEIMK*
C687J13239_10222904	3300001041	Groundwater	MQNIINYIKISNNPNEIKQILKPLKIKEVIKVAKCLNLPVRGNENKTEIIGNIILGIVK*
C687J13239_10248603	3300001041	Groundwater	MQDIINIIKIFTNPNEVKQILKPLKIKEVIKIAKCLGICIRGNENKTEIINNIILGTIK*
C687J13239_10269611	3300001041	Groundwater	MQDIINTIKISNNPKEVKQILKPLKIKEVIKIARGLGIFIRGNENKTEIISNIILEIMK*
C687J13239_10342071	3300001041	Groundwater	MQDIINTIRISNSPNEIKQILKPLKIKEVIKVAKCLDVYIRGNENKNEVIGNIILEIMK*
C687J13239_10451572	3300001041	Groundwater	MQDIINTIKISTNPNEVKKILKPLKIKEVINVAKGLNVYIRGNENKTEIISNIILTIVK*
C687J13896_10070709	3300001242	Groundwater	MQDIINTIKISNNPKEVKQILKPLKIKEVIKIARGLGICFRGNENKTEIISNIILEIMK*
C687J13896_10122104	3300001242	Groundwater	MQDIINIIKISNNPNEVKQILKPLKIKEVIKIAKGLDIFIRGNENKTEIISNIILEIMKG
C687J13896_10141234	3300001242	Groundwater	MQDIINTIKISNNPNEVKKILKPLKIKEVIKVAKCLNVYIRGNENKTEVIGNIILEIMK*
Ga0209728_100002476	3300024999	Soil	MQDIINTIKISTNSNEVKQILKPLKIKEVIKIAKGLDICIRGNENKTEVINNIILGIMK
Ga0209728_1000028205	3300024999	Soil	MQDIINAIKISNNPNEVKQMLKALKIKEVIKIANGLNVYIRGNENKTEVISNIILGIIKE
Ga0209728_1000044113	3300024999	Soil	MQDIINTIKISNNPKEVKQILKSLKIKEVIKVANGLNVKIRGNENKTEIISNIILEIMK
Ga0209728_100004719	3300024999	Soil	MQNIINTIKISNNPNEVKQILKPLKIKEVIKVAKCLDVCIRGNENKTEVIGNIILAIVKE
Ga0209728_1000048143	3300024999	Soil	MRDVNEVKIMQDIINTIKISTNPNEVKQILKPLKIKDVINVAKALDVYIRGNENKTEIIGNIILGIIKYKRSD
Ga0209728_1000064176	3300024999	Soil	MQDIINTIRISNSPNEIKQILKPLKIKEVVKIAKCLDVCIRGNENKTEIISNIILEIMK
Ga0209728_100016150	3300024999	Soil	MQNIINTIKISNNSNEVKQILKPLKIKEVVKIAKGLDVCIRGNENKTEVIGNIILAIVKG
Ga0209728_100022164	3300024999	Soil	MQDIINTIKLSTNPNEVKQILKPLKIKEVIKIAKGLGISIRGNENKTEIISNIILTIIK
Ga0209728_100025488	3300024999	Soil	MQNIINYIKISNNPNEIKQILKPLKIKEVIKVAKCLNLPVRGNENKTEIIGNIILGIVK
Ga0209728_1000266117	3300024999	Soil	MQDIINTIKISNNPNEVKKILKPLKIKEVVKIAKGLDICIRGNENKTEIICNIVLEVIKG
Ga0209728_1000289121	3300024999	Soil	MQDIINTIKISNNPSEVKQILKPLKIKDVIKVAKGLDVCIRGSENKTEVIGNIILAIVKG
Ga0209728_100030052	3300024999	Soil	MQDIINTIKLSNNPNEVKQILKPLKIKEVIKVAKCLDICIRGNENKTEIINNIILGIMK
Ga0209728_100032041	3300024999	Soil	MQDIINAIKISTNPNEVKQILKSLKIKDVIKVAKCLGIFIRGNENKTEIINNIILGIMK
Ga0209728_100042459	3300024999	Soil	MQDIINSIKLSNNPNEVKQILKPLKIKEVIKIAKCLDVCIRGNENKTEIISNIILEIMK
Ga0209728_100043310	3300024999	Soil	MQDIINSIKISNNPNEVKQILKPLKIKEIIKIAKGLDVCIRGNENKTEIISNIILGIMK
Ga0209728_100058353	3300024999	Soil	MQDIINTIKISTNHNEVKQILKPLKIKEVIKIAKGLGICIRGNENKTEIICNIILGIMK
Ga0209728_100060150	3300024999	Soil	MQNIINYIKISNNPNEIKQILKPLKIKEVVKIAKGLNLPVRGNENKTEIIGNIILGIIK
Ga0209728_100072931	3300024999	Soil	MQDIINTIKISNNPKEVKQILKPLKIKEVIKIAEGLDVYIRGNENKTEIISNIILGIAKE
Ga0209728_100089544	3300024999	Soil	NTIKLSNNPNEVKQILKPLKIKEVIKVAKCLDICIRGNENKTEIINNIILGIMK
Ga0209728_100097552	3300024999	Soil	MQDIINTIKISNNPKEVKQILKPLKIKEVIKIARGLGIFIRGNENKTEIISNIILEIMK
Ga0209728_10011746	3300024999	Soil	MQDIINTIRISNSPNEIKQILKPLKIKEVIKVAKCLDVYIRGNENKNEVIGNIILEIMK
Ga0209728_100121515	3300024999	Soil	MQDIINTIKTSNNPNEVKQILKPLKTKEVIKIAKCLDICIRGNENKTEVIGNIILGIIK
Ga0209728_100134215	3300024999	Soil	MQDIINAIKLSTNHNEVKQILKPLKIKEVIKIAKCLGICIRENENKTEIINNIILGIIK
Ga0209728_100134334	3300024999	Soil	LQDIINTIKISTNPNEVKQILKSLKIKDVINVAKGLNICIRGNENKTEVIGNIILEIMK
Ga0209728_100145427	3300024999	Soil	MQDIINTIKILNNPNEVKKILKPLKIKEVIKIAKGLGVCIRGNENKTEVISNIILAIMK
Ga0209728_100162530	3300024999	Soil	MQDIINTIKISNNPNEVKQILKPLKIKEVIKIAKGLGVCIRGNENKTEIINNIILGIMK
Ga0209728_10018862	3300024999	Soil	MQDIINHIKISTNPNEVKQILKPLKIKEVIKVAKGLDVYIRGNENKTEIISNIILTIIK
Ga0209728_100190530	3300024999	Soil	MQDIINTIKISTNPKEVKQILKPLKIKEVIKVAKGLDIYIRGNENKTEVIGNIILGIVKGEND
Ga0209728_100192625	3300024999	Soil	MQDIINTIKLSTNPNEVKQVLKPLKIKEVIKIAKGLDVQIRGNENKIEIISNIILGIMK
Ga0209728_100198014	3300024999	Soil	MQDIINTIKISNNPNEVKQILKSLKIKDVIKVAKCLGIFIRGNENKTEIINNIILGIMKG
Ga0209728_100221429	3300024999	Soil	MQDIINTIKISTNHNEVKQILKPLKIKEVIKIAKGLGICIRGNENKTEVINNIILGIMKGESI
Ga0209728_10022256	3300024999	Soil	MQDIINTIKISTNPNEVKKILKPLKIKEVINVAKGLNVYIRGNENKTEIISNIILTIVK
Ga0209728_100224617	3300024999	Soil	MQDIINTIKISNNPKEVKQILKPLKIKEVIKIAKGLDVYFRGNENKTEIISNIILEIMKG
Ga0209728_100246624	3300024999	Soil	MQDVINTIKISNNPNEVKKILKPLKIKEVIKVAKCLGISIRGSENKTEIIGNIILEIMRG
Ga0209728_10025854	3300024999	Soil	MQDIINTIKTSNNPNEVKQILKPLKTKEVIKIAKCLGICIRGNENKTEIINNIILEIMK
Ga0209728_100264317	3300024999	Soil	MQDIINTIKISTNPNEIKQILKPLKIKEVIKIAKGLGVCIRGNENKTEIINNIILGIIK
Ga0209728_100305319	3300024999	Soil	MQNIVNMIKITNDPNKVKQLLKPLKIKDVIKIAKDLDICIRGNENKTEIINNIILEIMK
Ga0209728_100306716	3300024999	Soil	MRGVREVKIMQDIINTIKTSTNPNEVKQILKPLKIKEVIKIAKGLDVCIRGNENKTEIINNIILGIMK
Ga0209728_100340017	3300024999	Soil	MQDIINTIKISTNSKEVKQILKPLKIKEVVKIAKGLDICIRGNENKTEIISNIILEIMK
Ga0209728_10038945	3300024999	Soil	MQDIINTIKISNNPNEVKQILKPLKIKEVIKVAKGLNICIRGNENKTEVIGNIILAVIKE
Ga0209728_100405518	3300024999	Soil	MQNIINTIKVSTNPNEVKQILKPLKIKEVIKVAKVLNVYIRGNENKTEVIGNIILEVVKE
Ga0209728_100473216	3300024999	Soil	MQDIINTIKLSTNPNEIKQILKPLKIKEVIKIAKGLNVCIRGNENKTEVINNIILGIIK
Ga0209728_100588811	3300024999	Soil	MQDIINIIKISNNPNEIKQILKPLKIKDVIKIAKCLGISVRGNENKTEIIGNIILAIVKGESI
Ga0209728_10073696	3300024999	Soil	MQDIINTIKISNNPNEVKQILKPLKIKEVIKIAKCLDVYIRGNENKTEIICNIILGIIK
Ga0209728_10073768	3300024999	Soil	MQNIINTIKISTNPNEVKQILKPLKIKEIIKVAKCLNVCIRGNENKTEVIGNIILTIVK
Ga0209728_10074036	3300024999	Soil	MQNIINYIKISNNPNEIKQILKPLKIKEVIKVAKCLNLPVRGNENKTEIIGNIILEIVK
Ga0209728_10080431	3300024999	Soil	MQDIINTIKISSNPNEIKKILKSLKIKEVIKVAKDLGICIRGNENKTEVISNIILGIIK
Ga0209728_10082667	3300024999	Soil	MQDIINIIKIFTNPNEVKQILKPLKIKEVIKIAKCLGICIRGNENKTEIINNIILGTIK
Ga0209728_10085002	3300024999	Soil	MQDIINTIKNLNDSNEVKQILKPLKIKEVIKIAKCLNVCFRGNENKTEIISNIILEIMK
Ga0209728_10101378	3300024999	Soil	MQDIINTIKTSNNPNEIKQILKQLKIKEVIKIAKGLGVCIRGNENKTEIISNIILEIMK
Ga0209728_10139085	3300024999	Soil	MQDIINTIKESTNIEEVKQLLKPLKRKDVLKVANGLYVHVRGNENKTEIICNIILANTK
Ga0209728_10159384	3300024999	Soil	MQDIINTIKISTNPNEVKQILKPLKIKEVIKIAKGLEIFIRGNENKTEIINNIILGIMK
Ga0209728_10164434	3300024999	Soil	MQNIINTIKLSNNTNEVKQILKSLKIKDVINVAKCLNVYIRGNENKTEVIGNIILAVVKE
Ga0209728_10184464	3300024999	Soil	MQDIINTIKISNNPNEIKQILKPLKIKEVIKIAKGLDICIRGNENKTEIISNIILAII
Ga0209728_10220014	3300024999	Soil	MQDVINTIKTSNNSKEVKQILKPLKIKEVIKVAKGLDVCIRGNENKTEIISNIILGIVK
Ga0209728_10220931	3300024999	Soil	MQDIINTIKISTNSNEIKQILKPLKIKEVIKIAKGLDIYIRGNENKTEIINNIILGIMK
Ga0209728_10231825	3300024999	Soil	MQDIINTIKISNNPNEVKQILKSLKIKDVIKVAKCLGIFIRGNENKTEIINNIILGIMK
Ga0209728_10283421	3300024999	Soil	MQDIINTIKISNNPNEVKKILKPLKIKEVINVAKGLNVYIRGNENKTEVISNIILEITK
Ga0209728_10415962	3300024999	Soil	MQDIINTIKISNNPNEVKKILKPLKIKEVVKVAKCLNVYIRGNENKTEIISNIILGIAKGKSI
Ga0209728_10428732	3300024999	Soil	MQDIINTIKISTNPNEIKQILKPLKIKEVIKIAKDLGICIRGNENKTEIINNIILGIMK
Ga0209728_10442112	3300024999	Soil	MQDIINSIKTSNNPIEVKQILKTLKIKELVKIAKDLDVCIRGNENKTEIISNIVLEIMK
Ga0209318_100099533	3300025000	Soil	MLTRCKIMQDIINIIKISNNPNEVKQILKPLKIKEVIKIAKGLDIFIRGNENKTEIISNIILEIMKG
Ga0209318_100115336	3300025000	Soil	MQDIINTIKISNNPKEVKQILKPLKIKEVIKIARGLGICFRGNENKTEIISNIILEIMK
Ga0209318_100242715	3300025000	Soil	MQDIINTIKISNNPNEVKKILKPLKIKEVIKVAKCLNVYIRGNENKTEVIGNIILEIMK
Ga0209318_100253126	3300025000	Soil	MQDIINTIKISNNPNEVKKILKPLKIKEVIKIAKCLNVYIRGNENKTEVIGNIILEIAKG
Ga0209318_10087695	3300025000	Soil	MQNIINYIKISNNPNEIKQILKPLKIKEVIKVAKCLNLPVRGNENKTEVINNIILGIIK
Ga0209318_10175842	3300025000	Soil	MQDIINTIKISNNPKEVKQILKPLKIKEVIKIAKCLNVYIRGNENKTEIISNIILGIAKG
Ga0209318_10314125	3300025000	Soil	IINTIKLSTNPNEVKQILKPLKIKEVIKIAKGLGISIRGNENKTEIISNIILTIIK
Ga0209319_10306766	3300025010	Groundwater	MQNIINTIKISNNPNEVKQILKPLKIKEVIKVAKCLDVCIRGNENKTEVIGNIILAIVKEXLLCK
Ga0209319_10386253	3300025010	Groundwater	MQDIINTIKISNNPNEVKQILKSLKIKDVIKVAKCLGIFIRGNENKTEIINNIILGIAKG
Ga0209000_100067128	3300025011	Groundwater	MLTRCKIMQDIINTIKLSNNPNEVKQILKPLKIKEVIKVAKCLDICIRGNENKTEIINNIILGIMK
Ga0209727_10370426	3300025012	Soil	MQDIINTIKISNNSNEVKQILKPLKIKEVVKIARGLGICIRGNENKTEIISNIILGIMK
Ga0208245_10434431	3300025073	Soil	MQDIINTIKISNNPNEVKQILKSLKIKDVIKVAKCLGIFIRGNENKTEII
Ga0208958_11589482	3300025117	Soil	MQDIINTIKISNNPKEVKQILKSLKIKEVIKVANGLNVKIRGNENKTEIISNIILEIIKYKGDE
Ga0265294_104739281	3300028602	Groundwater	MQNIINSIKGSTSVEEVKQLLKPLSKINTIKVAKGLGVEIRGNENKTEIINNIILVKAKK