Metagenome / Metatranscriptome Family F089563

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F089563
Family Type	Metagenome / Metatranscriptome
Number of Sequences	109
Average Sequence Length	71 residues
Representative Sequence	MSVLLAQRPKKTYQRGAIACEKCAAPIYVYKLKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPERRKKPRR
Number of Associated Samples	85
Number of Associated Scaffolds	109

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.19 %
% of genes near scaffold ends (potentially truncated)	11.93 %
% of genes from short scaffolds (< 2000 bps)	59.63 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.073 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (24.771 % of family members)
Environment Ontology (ENVO)	Unclassified (46.789 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.046 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.03% β-sheet: 28.28% Coil/Unstructured: 68.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 109 Family Scaffolds
PF10098	DUF2336	32.11
PF01297	ZnuA	6.42
PF16266	DUF4919	3.67
PF00005	ABC_tran	3.67
PF12704	MacB_PCD	3.67
PF03401	TctC	2.75
PF02627	CMD	1.83
PF03773	ArsP_1	1.83
PF12973	Cupin_7	1.83
PF03734	YkuD	0.92
PF07690	MFS_1	0.92
PF02687	FtsX	0.92
PF02668	TauD	0.92
PF03992	ABM	0.92
PF16868	NMT1_3	0.92
PF10058	zinc_ribbon_10	0.92
PF13439	Glyco_transf_4	0.92
PF03349	Toluene_X	0.92
PF12399	BCA_ABC_TP_C	0.92
PF01794	Ferric_reduct	0.92
PF00294	PfkB	0.92

COG ID	Name	Functional Category	% Frequency in 109 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.75
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.83
COG0701	Uncharacterized membrane protein YraQ, UPF0718 family	Function unknown [S]	1.83
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.83
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.92
COG2067	Long-chain fatty acid transport protein	Lipid transport and metabolism [I]	0.92
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.92
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.92

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.07 %
Unclassified	root	N/A	11.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.07 %
Unclassified	root	N/A	11.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.07 %
Unclassified	root	N/A	11.93 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.32 %
Unclassified	root	N/A	11.93 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	70.64 %
Unclassified	root	N/A	11.93 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	51.38 %
Unclassified	root	N/A	11.93 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.92 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.92 %

Name	Rank	Taxonomy	Distribution
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	22.02 %
Unclassified	root	N/A	11.93 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.50 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	22.02 %
Unclassified	root	N/A	11.93 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.83 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	20.18 %
Unclassified	root	N/A	11.93 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	1.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.83 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %

Name	Rank	Taxonomy	Distribution
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	20.18 %
Unclassified	root	N/A	11.93 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.83 %
Rhodovulum sp. PH10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	0.92 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.92 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000313\|WSSedB1CaDRAFT_10040545	All Organisms → cellular organisms → Bacteria → Proteobacteria	896	Open in IMG/M
3300000313\|WSSedB1CaDRAFT_10064511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	692	Open in IMG/M
3300001414\|JGI20174J14864_1003605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	852	Open in IMG/M
3300001538\|A10PFW1_10229950	Not Available	821	Open in IMG/M
3300001565\|A35518A_1024765	Not Available	673	Open in IMG/M
3300001664\|P5cmW16_1015849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1446	Open in IMG/M
3300002162\|JGI24139J26690_1008319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	2005	Open in IMG/M
3300002495\|BRMGV_1028425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2724	Open in IMG/M
3300002549\|JGI24130J36418_10004121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4957	Open in IMG/M
3300003369\|JGI24140J50213_10003114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6687	Open in IMG/M
3300003369\|JGI24140J50213_10003617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6200	Open in IMG/M
3300003369\|JGI24140J50213_10037669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1761	Open in IMG/M
3300004000\|Ga0055458_10063720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	948	Open in IMG/M
3300005887\|Ga0075292_1058928	Not Available	566	Open in IMG/M
3300005994\|Ga0066789_10022702	All Organisms → cellular organisms → Bacteria → Proteobacteria	2779	Open in IMG/M
3300005995\|Ga0066790_10028441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2442	Open in IMG/M
3300006052\|Ga0075029_100143221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1465	Open in IMG/M
3300006619\|Ga0075529_1003134	All Organisms → cellular organisms → Bacteria → Proteobacteria	1282	Open in IMG/M
3300006638\|Ga0075522_10000520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	27842	Open in IMG/M
3300006642\|Ga0075521_10009415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3731	Open in IMG/M
3300006642\|Ga0075521_10196330	All Organisms → cellular organisms → Bacteria → Proteobacteria	956	Open in IMG/M
3300006795\|Ga0075520_1047833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2061	Open in IMG/M
3300006795\|Ga0075520_1274585	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300009524\|Ga0116225_1340123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	669	Open in IMG/M
3300009662\|Ga0105856_1091020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	882	Open in IMG/M
3300009839\|Ga0116223_10045707	All Organisms → cellular organisms → Bacteria → Proteobacteria	2883	Open in IMG/M
3300010341\|Ga0074045_10311173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1032	Open in IMG/M
3300010396\|Ga0134126_10004462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17505	Open in IMG/M
3300010396\|Ga0134126_10070643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4335	Open in IMG/M
3300010396\|Ga0134126_12007266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	632	Open in IMG/M
3300010398\|Ga0126383_10144514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2208	Open in IMG/M
3300011442\|Ga0137437_1283798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	567	Open in IMG/M
3300012931\|Ga0153915_10143663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2580	Open in IMG/M
3300013104\|Ga0157370_10707793	Not Available	919	Open in IMG/M
3300013503\|Ga0120127_10000631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6577	Open in IMG/M
3300013503\|Ga0120127_10002404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2983	Open in IMG/M
3300013770\|Ga0120123_1178144	Not Available	510	Open in IMG/M
3300014153\|Ga0181527_1152157	Not Available	1010	Open in IMG/M
3300014155\|Ga0181524_10052553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2567	Open in IMG/M
3300014165\|Ga0181523_10304386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	900	Open in IMG/M
3300014264\|Ga0075308_1057570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300014489\|Ga0182018_10306362	Not Available	863	Open in IMG/M
3300014498\|Ga0182019_10703484	Not Available	716	Open in IMG/M
3300014638\|Ga0181536_10097792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1677	Open in IMG/M
3300014657\|Ga0181522_10012045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4661	Open in IMG/M
3300014829\|Ga0120104_1052441	All Organisms → cellular organisms → Bacteria → Proteobacteria	770	Open in IMG/M
3300015078\|Ga0167660_1005712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1310	Open in IMG/M
3300015080\|Ga0167639_1000349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7227	Open in IMG/M
3300015090\|Ga0167634_1026354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	831	Open in IMG/M
3300017927\|Ga0187824_10011791	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300017936\|Ga0187821_10116750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	992	Open in IMG/M
3300017936\|Ga0187821_10169917	Not Available	829	Open in IMG/M
3300017946\|Ga0187879_10438578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	724	Open in IMG/M
3300017974\|Ga0187777_10546035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	813	Open in IMG/M
3300018008\|Ga0187888_1397586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	521	Open in IMG/M
3300018057\|Ga0187858_10132212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1676	Open in IMG/M
3300018060\|Ga0187765_10463161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	795	Open in IMG/M
3300018083\|Ga0184628_10005107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6269	Open in IMG/M
3300018088\|Ga0187771_10004531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9777	Open in IMG/M
3300018088\|Ga0187771_10152678	All Organisms → cellular organisms → Bacteria → Proteobacteria	1898	Open in IMG/M
3300018088\|Ga0187771_10540103	Not Available	988	Open in IMG/M
3300021560\|Ga0126371_10342565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1628	Open in IMG/M
3300022518\|Ga0224548_1003962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1756	Open in IMG/M
3300022881\|Ga0224545_1054326	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300025464\|Ga0208076_1002514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2812	Open in IMG/M
3300025475\|Ga0208478_1000624	All Organisms → cellular organisms → Bacteria → Proteobacteria	11750	Open in IMG/M
3300025475\|Ga0208478_1009409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2218	Open in IMG/M
3300025494\|Ga0207928_1000841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	4893	Open in IMG/M
3300025504\|Ga0208356_1013485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1822	Open in IMG/M
3300025509\|Ga0208848_1008624	All Organisms → cellular organisms → Bacteria → Proteobacteria	2109	Open in IMG/M
3300025509\|Ga0208848_1015731	All Organisms → cellular organisms → Bacteria → Proteobacteria	1614	Open in IMG/M
3300025565\|Ga0210110_1136254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH10	582	Open in IMG/M
3300025604\|Ga0207930_1010164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2837	Open in IMG/M
3300025604\|Ga0207930_1027927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	1534	Open in IMG/M
3300025625\|Ga0208219_1002378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6674	Open in IMG/M
3300025650\|Ga0209385_1138600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	737	Open in IMG/M
3300025750\|Ga0209747_1204296	Not Available	597	Open in IMG/M
3300025862\|Ga0209483_1000100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	85201	Open in IMG/M
3300025878\|Ga0209584_10002661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5790	Open in IMG/M
3300026291\|Ga0209890_10001533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10462	Open in IMG/M
3300027645\|Ga0209117_1180387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	540	Open in IMG/M
3300028556\|Ga0265337_1002701	All Organisms → cellular organisms → Bacteria	7965	Open in IMG/M
3300029903\|Ga0247271_113130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1123	Open in IMG/M
3300030659\|Ga0316363_10343152	Not Available	590	Open in IMG/M
3300030916\|Ga0075386_11019299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	806	Open in IMG/M
3300031238\|Ga0265332_10083792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1351	Open in IMG/M
3300031256\|Ga0315556_1038351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2024	Open in IMG/M
3300031446\|Ga0170820_11359486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	972	Open in IMG/M
3300032160\|Ga0311301_10053412	All Organisms → cellular organisms → Bacteria → Proteobacteria	9132	Open in IMG/M
3300032160\|Ga0311301_10720176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1396	Open in IMG/M
3300032160\|Ga0311301_12864265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	524	Open in IMG/M
3300032770\|Ga0335085_10134226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3135	Open in IMG/M
3300032770\|Ga0335085_10235373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2213	Open in IMG/M
3300032770\|Ga0335085_10516502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1360	Open in IMG/M
3300032770\|Ga0335085_11011884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300032783\|Ga0335079_10109667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3121	Open in IMG/M
3300032783\|Ga0335079_10202199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2204	Open in IMG/M
3300032783\|Ga0335079_10868603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	929	Open in IMG/M
3300032805\|Ga0335078_10042270	All Organisms → cellular organisms → Bacteria → Proteobacteria	6757	Open in IMG/M
3300032829\|Ga0335070_11586330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	595	Open in IMG/M
3300032892\|Ga0335081_10144750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3413	Open in IMG/M
3300032892\|Ga0335081_10490245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1550	Open in IMG/M
3300032892\|Ga0335081_10633052	All Organisms → cellular organisms → Bacteria → Proteobacteria	1312	Open in IMG/M
3300032955\|Ga0335076_11591395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	541	Open in IMG/M
3300033513\|Ga0316628_101804434	All Organisms → cellular organisms → Bacteria → Proteobacteria	814	Open in IMG/M
3300033887\|Ga0334790_006396	All Organisms → cellular organisms → Bacteria	7028	Open in IMG/M
3300034125\|Ga0370484_0054109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	999	Open in IMG/M
3300034125\|Ga0370484_0079035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	843	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.25%
Host-Associated	Host-Associated	2.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.98%
Aquatic	Environmental → Aquatic	19.27%
Plants	Host-Associated → Plants	2.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.23%
Freshwater	Environmental → Aquatic → Freshwater	11.01%
Marine	Environmental → Aquatic → Marine	5.50%
Sediment	Environmental → Aquatic → Sediment	2.75%
Peat	Environmental → Terrestrial → Peat	2.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.75%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	27.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.01%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.67%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.83%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.92%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.92%
Loam	Environmental → Terrestrial → Soil → Loam	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	31.19%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	22.02%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.34%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.75%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.83%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.83%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.92%
Oil-Contaminated Sediment	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment	0.92%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.92%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	24.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	12.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	6.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.50%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.59%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.75%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.75%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.75%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.75%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.75%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.83%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.83%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.83%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.83%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.92%
Mangrove Soil	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated Sediment → Mangrove Soil	0.92%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.92%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.92%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.92%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.92%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.92%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000313	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B1 Cattail	Environmental	Open in IMG/M
3300001414	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001565	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A35-5cm-18A)- 1 week illumina new	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300002162	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-21A	Environmental	Open in IMG/M
3300002495	454 Fosmid Sequence	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004000	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006619	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-4B	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014264	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D2_rd	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015078	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-11a, vegetated hydrological feature)	Environmental	Open in IMG/M
3300015080	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6C, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015090	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5A, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022518	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 20-24	Environmental	Open in IMG/M
3300022881	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 20-24	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025475	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025494	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025565	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Galinas_PWB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031256	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-10	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
WSSedB1CaDRAFT_100405451	3300000313	Wetland	MAALQTLLSRKNVYQRGVIACEKCAKPIYVYKLKALPDEFSVRCPHCSSRGIYMKRAIVLEDLPERRKKPRR*
WSSedB1CaDRAFT_100645112	3300000313	Wetland	MAALQVLHSRKYVYQRGVVACEKCGKPIYVYKLKALPDEFSVRCPHCSGRGIYMKRAIAIEDLPERRKKPRR*
JGI20174J14864_10036052	3300001414	Arctic Peat Soil	MSVLLAQRPKKTYQRGAVVCEKCAAPIYVYKLKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPERRKKPRR*
A10PFW1_102299502	3300001538	Permafrost	MSALQSQRPKKSVYTRGVVTCRKCAAPIYVYRISAMPDEFSVQCSKCRDRGIYLKRAVVLEELPERRRKPRK*
A35518A_10247652	3300001565	Permafrost	MAVLQHQRARKSVYERGVVACEKCAAPIYVYKYKLLPDEFSVRCSHCGGRGMYKKRAIAIESMPERRKKPRD*
P5cmW16_10158492	3300001664	Permafrost	MAVLQHQRARKSVYERGVVACEKCAAPIYVYKYKLLPDEFSVRCSHCGGRGMYKKRAIAIESVPERRKKPRD*
JGI24139J26690_10083193	3300002162	Arctic Peat Soil	MSVLLAQRPKKTYQRGAIACEKCAAPIYIYKLKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPERRKKPRR*
BRMGV_10284252	3300002495	Mangrove Soil	MATLLTSRPKRFYQRGTVACQKCAAPIYIYKLKALPDEFSLRCSKCGARGFYAARAVVVEDMPERRKKPRK*
JGI24130J36418_100041217	3300002549	Arctic Peat Soil	MSVLLAQRPKRTYQRGAIACEKCAAPIYVYKPKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPERRKKPRR*
JGI24140J50213_100031146	3300003369	Arctic Peat Soil	MSVLLAQRPKKTYQRGAIACEKCAAPIYVYKLKTLPDEFSVRCPPCGGRGIYLKRAIAIEEAPERRKKPRR*
JGI24140J50213_100036173	3300003369	Arctic Peat Soil	MAVLQRQRARKSVYERGVVACEKCATPIYVYKYKSLPEEFSVRCSHCGGRGMYKKRAIAIESMPERRKKPRD*
JGI24140J50213_100376693	3300003369	Arctic Peat Soil	MAVLQXQRARKSVYERGVVACEKCAAPIYVYKYKLLPDEFSVRCSHCGGRGMYKKRAIAIESVPERRKKPRD*
Ga0055458_100637201	3300004000	Natural And Restored Wetlands	MATLLGTRPSARPKRFYQRGRVTCQKCAAPIYVYKFTALPDEISVRCNKCGARGIYAARAIVVEEVPERRKKPRK
Ga0075292_10589281	3300005887	Rice Paddy Soil	MALARTQRPKKSVYERGVVQCRKCHAPIYVHKFMNLPEEFSVHCKRCNNRGIYSKREIKIEALPERRKKPRS*
Ga0066789_100227023	3300005994	Soil	MSVLLAQRPKKTYQRGAIDCEKCAAPIYVYKLKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPEWRKKPRR*
Ga0066790_100284414	3300005995	Soil	MSVLLGQRPKKTYQRGVVACTKCAAPIYIHRLKTLPEEFSVRCPHCGDRGLYQKRAIAFEEVPERRKKPRD*
Ga0075029_1001432213	3300006052	Watersheds	MAALQVLHSRKNAYQRGVVACEKCAKPIYVYKLKALPDEFSVRCPHCSGRGMYMKRAIAIEDLPERRKKPRR*
Ga0075529_10031343	3300006619	Arctic Peat Soil	LAQRPKKAYQRGAVVCEKCATPIYVYKLKALPEEFSVRCPHCGSRGIYLKRAIAIEEAPERRKKPRR*
Ga0075522_1000052015	3300006638	Arctic Peat Soil	MAVLQMQRPKKSVYHRGEVACRKCGKPIAIFKLKALPDEFSVHCLRCGDRGVYLKSAVVIQELPERRKKPRD*
Ga0075521_100094154	3300006642	Arctic Peat Soil	MSVLLRQRPKKTYQRGVVACTKCAAPIYIHRLKTLPEEFSVRCPHCGDRSLYQKRAIAFEEVPERRKKPRD*
Ga0075521_101963302	3300006642	Arctic Peat Soil	MSVLLAQRPKKTYQRGAIACEKCAAPIYVYKLKTLPDEFSERCPHCGGRGIYLKRAIAIEEAPERRKKPRR*
Ga0075520_10478332	3300006795	Arctic Peat Soil	MSVLLRQRPKKTYQRGVVACTKCAAPIYVHRLKTLPEEFSLRCPHCSDRGMYQKRAVVIEDVPERRKKQRG*
Ga0075520_12745851	3300006795	Arctic Peat Soil	TYQRGAIACEKCAAPIYVYKLKTLPDEFSERCPHCGGRGIYLKRAIAIEEAPERRKKPRR
Ga0075524_103552562	3300006950	Arctic Peat Soil	MSVLLRQRPKKTYQRGVVACTKCAAPIYVHRLKTLPEEFSLRCPHCSDRGMYQKRAVVI
Ga0116225_13401232	3300009524	Peatlands Soil	MSLLLRTQRPKKSTYDRGVVACVKCAAPIYVYKLKSLPDEFSVRCMHCGDRGIYTKRAIGIESLPERRRKPRA*
Ga0105856_10910202	3300009662	Permafrost Soil	MSVLLAQRPKKTYQRGAIACEKCAAPIYVYKLKALPDEFSVRCPHCGGRGIYLKRAIAIEEAPERRKKPRR*
Ga0116223_100457075	3300009839	Peatlands Soil	MSVLLAQRPKKTYQRGTIACEKCAAPIYVYKLKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPERRKKPRR*
Ga0074045_103111732	3300010341	Bog Forest Soil	MSLLLRTQRPKKSTYDRGVVACVKCAAPIYVYKLKSLPDEFSVRCTHCGDRGIYAKRAIGIESLPERRRKPRA*
Ga0134126_1000446214	3300010396	Terrestrial Soil	MAVLQSQRPKKSAYHRGVVACRKCAAPIPIYKFKALPDEFSVHCPKCRNRGIYSKSAVIIEELPERRKKPRD*
Ga0134126_100706435	3300010396	Terrestrial Soil	MSFDLVKRPKKAVYQRGEVTCRKCGAPIYVHKLKALPEEFSVHCTKCGDRGIYQNRAVMIQELPERRKKSRK*
Ga0134126_120072662	3300010396	Terrestrial Soil	MKRPKKAVYQRGEITCRKCGAPIYVHKLKALPEEFSVHCTKCGDRGIYQNRAVVIRELPERRKKSRK*
Ga0126383_101445143	3300010398	Tropical Forest Soil	MALLQDKRPAKATYERGVLACATCAAPIYVYKLKKLPEEFSARCARCGERGMYAKRALTVESLRERRKKPRD*
Ga0137437_12837982	3300011442	Soil	MSALRIKRQKTVYPRGEVACRKCAAPIYIYKLTALADEFSVHCSRCGDRGIYLKSAIAIKELPERRKKPRK*
Ga0153915_101436633	3300012931	Freshwater Wetlands	MSALLAQRPKKSVYQRGMVECRKCAVPIYVYKLNTLPDEFSVRCSKCGDRGFYLKRAVKIDELPERRRKPRR*
Ga0157370_107077931	3300013104	Corn Rhizosphere	MALLHKKPAAKQTYERGVLACTKCAAPIYVYKLKNLPEEFSVRCPRCGERGLYAKRAMTVESLRERRKKPRD*
Ga0120127_100006315	3300013503	Permafrost	MATLLSQRPKASVYQRGVVICRKCASPIRVHKLKGLAGEFSVLCPKCRDRGIYSKRAMTIEILPERRKKPRK*
Ga0120127_100024043	3300013503	Permafrost	MAVLQRQPARKSVYERGVVACEKCATPIYIYKYKSLPEEFSVRCSHCGGRGMYKKRAIAIESMPERRKKPRD*
Ga0120123_11781442	3300013770	Permafrost	QRQRARKSVYERGVVACEKCATPIYVYKYKSLPEEFSVRCSHCGGRGMYKKRAIAIESVPERRKKPRD*
Ga0181527_11521571	3300014153	Bog	MSLLLRTQRPKKSTYDRGVVVCVKCAAPIYVYKLKSLPDEFSVRCTHCGDRGIYAKREIGIESLPERRRKP
Ga0181524_100525535	3300014155	Bog	MSLLLRTQRPKKSTYDRGVVVCVKCAAPIYVYKLKSLPDEFSVRCTHCGDRGIYAKREIGIESLPERRRKPRA*
Ga0181523_103043861	3300014165	Bog	RAVTNRGRDPMSLLLRTQRLKKSTYDRGVVACVKCAAPIYVYKLKSLPDEFSVRCTHCGDRGIYAKRAIGIESLPERRRKPRA*
Ga0075308_10575701	3300014264	Natural And Restored Wetlands	MATLLGTRPSARPKRFYQRGRVTCQKCAAPIYVYKFTALPDEISVRCNKCGARGIYAARAIVVEDLPERRKKPRK*
Ga0182018_103063622	3300014489	Palsa	MAVLQHQRARKSVYERGVVACEKCATPIYVYKYRSLPEEFSVRCSHCGGRGMYKKRAIAIESMPERRKKPRD*
Ga0182019_107034842	3300014498	Fen	MSVLLGQRPKKTYQRGVVACTKCAAPIYVHRLKTLPEEFSLRCPHCGDRGLYQKRAIALEEVPERRKKARGEQA*
Ga0181536_100977923	3300014638	Bog	MSLLLPTQRPKKSTYDRGVVACAKCAAPIYVYKLKSLPDEFSVRCTHCGDRGIYAKRAIGIESLPERRRKPRA*
Ga0181522_100120452	3300014657	Bog	MTTLQMQRPKKTVYQRGEVACRKCGTPIPIFKLKTLPDEFSVHCKRCGDRGIYWKSAVVIQEMPERRKKPRD*
Ga0120104_10524411	3300014829	Permafrost	MAVLQRQRARKSVYERGVVACEKCAAPIYVYKYKLLPDEFSVRCSHCGGRGMYKKRAIAIESVPERRKKPRD*
Ga0167660_10057121	3300015078	Glacier Forefield Soil	MSAVQLKKKAVYQRGVVACRKCAALIQVRRYATLPDEFSVHCQNCGDRGIYLKRAIAIQEMPERRKKPRADRA*
Ga0167639_10003498	3300015080	Glacier Forefield Soil	MSVLQAQRTRKTYQRGAIVCEKCAAPIYTHKLKALPDEFSVRCPRCGDRGIYQKRAVAIEEAPERRKKPRK*
Ga0167634_10263542	3300015090	Glacier Forefield Soil	MSVLLAQRPKKTYQRGAIACKKCAAPIYVYKLKALPDEFSVRCPHCGGRDIYLKRAIAIEEAPERRKKPRK*
Ga0187824_100117912	3300017927	Freshwater Sediment	MAILQAKRPTKLTYERGVLACVNCAAPIYVYKLKALQDEFSVRCPRCGGRGIYAKRALTVENLRERRKKPRA
Ga0187821_101167502	3300017936	Freshwater Sediment	LQAKRPTKLTYERGVLACVNCAAPIYVYKLKALQDEFSVRCPRCGGRGIYAKRALTVENLRERRKKPRA
Ga0187821_101699172	3300017936	Freshwater Sediment	MAILQAKRPTKLTYERGVLACVKCAAPIYVYKLKKLPDEFSVRCPRCGDRGIYAKRALTVENLR
Ga0187879_104385782	3300017946	Peatland	MSLLLRTQRPKKSTYDRGVVACVKCAAPIYVYKLKSLPDEFSVRCTHCGDRGIYAKRAIGIESLPERRRKPRA
Ga0187777_105460352	3300017974	Tropical Peatland	MSALLAQRQKKTFYQRGTIACQKCAAPINVYRLKKLPEEFSLRCPKCGDRGFYSRGGIAIDELPERRRKPRD
Ga0187888_13975861	3300018008	Peatland	MSLLLPTQRPKKSTYDRGVVACAKCAAPIYVYKLKSLPDEFSVRCTHCGDRGIYAKREIGIESLPERRRKPRA
Ga0187858_101322122	3300018057	Peatland	MSLLLRTQRPKKSTYDRGVVACAKCAAPIYVYKLKSLPDEFSVRCTHCGDRGIYAKRAIGIESLPERRRKPRA
Ga0187765_104631611	3300018060	Tropical Peatland	MSLLPTKRPVKQTYERGVLACAKCAAPIYVYKLKKLPEEFSVRCPRCGERGLYARQALTIESLRERRKKPRD
Ga0184628_100051075	3300018083	Groundwater Sediment	MSALQIKRQKKTVYPRGEVACRKCAAPIYIYKLTALADEFSVHCSRCGDRGIYLKSAIAIKELPERRKKPRK
Ga0187771_100045312	3300018088	Tropical Peatland	MLLGRKSTYERGVIACAKCAAPIYVYRLKSLAEEFSVRCPHCGARAIYDKRALGVESVRERRKKPRN
Ga0187771_101526783	3300018088	Tropical Peatland	MLQGRKSTYERGAVACAKCAAPIYVYKLKSLAEEFSVHCPHCGARGIYIKHALGVESLRERRKKPRS
Ga0187771_105401032	3300018088	Tropical Peatland	MAMLAARKSTYERGVISCAKCAAPIYVYKLKSLAEEFSVRCPHCDARGIYSKRALGVESLRERRKKPRN
Ga0126371_103425651	3300021560	Tropical Forest Soil	MALPQDKRPAKATYERGVLACAACAAPIYVYKLKKLPEEFSARCPRCGERGMYAKRALTVESLRERRKKPRD
Ga0224548_10039623	3300022518	Soil	MAVLKMQRRKKSVYRRGEVACRKCGMPIPIFKLKALPDEFSVHCLRCGDRGVYLKSAVVIEELPERRKKPRD
Ga0224545_10543262	3300022881	Soil	MAVLQHQRSRKSVYERGVVACEKCATPIYVYKYRSLPEEFSVRCSHCGGRGMYKKRAIAIESMPERRKKPRD
Ga0208076_10025144	3300025464	Arctic Peat Soil	MAVLQRQPARKSVYERGVVACEKCATPIYIYKYKSLPEEFSVRCSHCGGRGMYKKRAIAIESVPERRKKPRD
Ga0208478_10006248	3300025475	Arctic Peat Soil	MSVLLAQRPKKTYQRGAIACEKCAAPIYVYKLKTLPDEFSVRCPPCGGRGIYLKRAIAIEEAPERRKKPRR
Ga0208478_10094093	3300025475	Arctic Peat Soil	MAVLQRQRARKSVYERGVVACEKCATPIYVYKYKSLPEEFSVRCSHCGGRGMYKKRAIAIESMPERRK
Ga0207928_10008411	3300025494	Arctic Peat Soil	MSVLLRQRPKKTYQRGVVACTKCAAPIYIHRLKTLPEEFSVRCPHCGDRGLYQKRAIAFEEVPERRKKPRD
Ga0208356_10134852	3300025504	Arctic Peat Soil	MAVLQRQRARKSVYERGVVACEKCATPIYVYKYKSLPEEFSVRCSHCGGRGMYKKRAIAIESMPERRKKPRD
Ga0208848_10086242	3300025509	Arctic Peat Soil	MSVLLAQRPKKTYQRGAVVCEKCAAPIYVYKLKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPERRKKPRR
Ga0208848_10157313	3300025509	Arctic Peat Soil	MAVLQRQRARKSVYERGVVACEKCATPIYIYKYKSLPEEFSVRCSHCGGRGMYKKRAIAIESVPERRKKPRD
Ga0210110_11362541	3300025565	Natural And Restored Wetlands	MATLLGTRPSARPKRFYQRGAVTCQKCSAPIYVYKLKALPDEISVRCSKCGARGIYAARAIVVEEVPERRKKPRK
Ga0207930_10101642	3300025604	Arctic Peat Soil	MAVLQRQRARKSVYERGVVACEKCATPIYVYKYKSLPEEFSVRCSHCGGRGMYKKRAIAIESVPERRKKPRD
Ga0207930_10279272	3300025604	Arctic Peat Soil	MSVLLAQRPKKTYQRGAIACEKCAAPIYVYKLKTLPDEFSERCPHCGGRGIYLKRAIAIEEAPERRKKPRR
Ga0208219_10023787	3300025625	Arctic Peat Soil	MAVLQRQPARKSVYERGVVACEKCATPIYVYKYKSLPEEFSVRCSHCGGRGMYKKRAIAIESVPERRKKPRD
Ga0209385_11386002	3300025650	Arctic Peat Soil	PGRNAMSVLLAQRPKKTYQRGAIACEKCAAPIYVYKLKTLPDEFSERCPHCGGRGIYLKRAIAIEEAPERRKKPRR
Ga0209747_12042961	3300025750	Arctic Peat Soil	MSVLLRQRPKKTYQRGVVACTKCAAPIYVHRLKTLPEEFSLRCPHCSDRGMYQKRAVAFEEVPERRKKQRG
Ga0209483_100010040	3300025862	Arctic Peat Soil	MAVLQMQRPKKSVYHRGEVACRKCGKPIAIFKLKALPDEFSVHCLRCGDRGVYLKSAVVIQELPERRKKPRD
Ga0209584_100026615	3300025878	Arctic Peat Soil	MSVLLRQRPKKTYQRGVVACTKCAAPIYIHRLKTLPEEFSVRCPHCGDRSLYQKRAIAFEEVPERRKKPRD
Ga0209890_1000153311	3300026291	Soil	MSVLLAQRPKKTYQRGAIDCEKCAAPIYVYKLKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPEWRKKPRR
Ga0209117_11803871	3300027645	Forest Soil	MSVLLAQRPKKTYQRGAIACEKCAAPIYVYKFKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPERRKKPRR
Ga0265337_10027015	3300028556	Rhizosphere	MSVLLAQRPKKTYQRGAIACEKCAAPIYIYKLKTLPDEFSVRCPHCGGRSIYLKRAIAIEEAPERRKKPRR
Ga0247271_1131303	3300029903	Soil	MTTLQMQRPKKTVYQRGEVACRKCGTPIPIFKLKTLPDEFSVHCKRCGDRGIYWKSAVVIQEMPERRKKPRD
Ga0316363_103431521	3300030659	Peatlands Soil	MSLLLRTQRPKKSTYDRGVVACVKCAAPIYVYKLKSLPDEFSVRCMHCGDRGIYTKRAIGIES
Ga0075386_110192993	3300030916	Soil	MAVLQMQRPKKSVYHRGEVACRKCGTPIPLFKLKALPDEFSVHCMRCGDRGIYLKSAVVTKELPERRKKP
Ga0265332_100837922	3300031238	Rhizosphere	MSVLLGQRPKKTYQRGVVACTKCAVPIYVHRLKTLPEEFSLRCPHCGDRGMYQKRAVAFEEVPERRKKQRGE
Ga0315556_10383511	3300031256	Salt Marsh Sediment	MAVLLKTRQKRFYQRGAVVCQKCAAPIYVYKLKALPDEFSVRCSKCGTRGFYLKRAMTIEDAPERRKKPRK
Ga0170820_113594862	3300031446	Forest Soil	MAVLQMQRPKKSVYHRGEVACRKCGTPIPLFKLKALPDEFSVHCMRCGDRGIYLKSAVVTKELPERRKKPRD
Ga0311301_100534126	3300032160	Peatlands Soil	MSVLLAQRPKKTYQRGTIACEKCAAPIYVYKLKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPERRKKPRR
Ga0311301_107201762	3300032160	Peatlands Soil	MSLLLRTQRPKKSTYDRGVVACVKCAAPIYVYKLKSLPDEFSVRCMHCGDRGIYTKRAIGIESLPERRRKPRA
Ga0311301_128642651	3300032160	Peatlands Soil	MSLLLRTQRPRKSTYDRGVVACAKCAAPIYVYKLKSLPEEFSVRCTHCGDRGIYAKRAIGIESLPERRRKPRA
Ga0335085_101342261	3300032770	Soil	MAVLQAQRPKKSTWERGVVACVKCASPIYVYKIRTLPEEFSLRCTRCGDRGIYTKRALGIESLRERRKKARD
Ga0335085_102353734	3300032770	Soil	MSILQKKRPAKLTYERGVLACAKCTASIYVYKLKKLTDEFSVRCPRCGDRGIYTKHALTIESLRERRKKPRD
Ga0335085_105165022	3300032770	Soil	MPALQSQRPKKSVYMRGMIACRKCATPIYVYKLNAMPDEFSVQCPKCRDRGIYLKRAVVLQDLPERRKKPRQ
Ga0335085_110118843	3300032770	Soil	QRPKKTMYQRGMVACRKCAAPIYIYRLKALADEFSVHCSKCGDRGIYLKRAVTIEDVPERRQKPRK
Ga0335079_101096674	3300032783	Soil	MAFLYAQRPRKPTYERGVLACAKCAAPIYIHKLKTLSDEFSVRCARCGERGIYARRAIAIESLRERRRKPRA
Ga0335079_102021992	3300032783	Soil	MAVLQAQRPKKATWERGVVTCVKCASPIYVYKIRALPEEFSLRCTRCGDRGIYAKRSLGIESLRERRKKSRD
Ga0335079_108686033	3300032783	Soil	MSVLQTQRPKKFVYERGMVACEKCAAPIYVYKLKALPDEFSVRCSRCGDRGIYAKRTIAIETLPERRKKPRK
Ga0335078_100422706	3300032805	Soil	MAFLYAQRPRKPTYERGVLACAKCAAPIYIHKLKTLPDEFSVCCARCGERGIYARRAIAIESLRERRRKPRA
Ga0335070_115863301	3300032829	Soil	MSVLQIQRQKKTYQRGAIACAKCAAPIYIYKLKTLADEFSVRCPHCGERGIYLKRAIAIEEARERRKQPRR
Ga0335081_101447503	3300032892	Soil	MSVLQTQRPKKSVYERGMVACEKCAAPIYVYKLKALPDEFSVRCSRCGDRGIYAKRTIAIETLPERRKKPRK
Ga0335081_104902453	3300032892	Soil	MSILQKKRPAKLTYERGVLACAKCTAPIYVYKLEKLTDEFSVRCPRCGDRGIYTKHALTIESLRERRRKPRD
Ga0335081_106330522	3300032892	Soil	MAFLYAQRPRKPTYERGVLACAKCAAPIYIHKLKTLPDEFSVRCARCGERGIYARRAIAIESLRERRRKPRA
Ga0335076_115913952	3300032955	Soil	MSLLAKRPKKSTYERGMIACAKCAAPIYVYKLKALPEEFSVRCARCGERGIYARRALEIESLHERRRKPRA
Ga0316628_1018044341	3300033513	Soil	MAALQTLLSRKNVYQRGVIACEKCAKPIYVYKLKALPDEFSVRCPHCSGRGIYMKRAIVLEDLPERRKKPRR
Ga0334790_006396_63_281	3300033887	Soil	MAVLQHQRARKSVYERGVVACEKCATPIYVYKYRSLPEEFSVRCSHCGGRGMYKKRAIAIESMPERRKKPRD
Ga0370484_0054109_14_229	3300034125	Untreated Peat Soil	MSVLLAQRPKKTYQRGAIACEKCAAPIYVYKLNALPDEFSVRCPHCGGRDIYLKRAIATEEAPERRKKPRK
Ga0370484_0079035_17_232	3300034125	Untreated Peat Soil	MSVLLAQRPKKTYQRGAIACEKCAAPIYVYKLKTLPDEFSVRCPHCGGRGIYLKRAIAIEEAPERRKKPRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F089563

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences